Multiple sequence alignment - TraesCS6A01G227400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G227400 chr6A 100.000 2705 0 0 1 2705 428076063 428073359 0.000000e+00 4996
1 TraesCS6A01G227400 chr6D 94.906 903 34 5 815 1716 292963070 292963961 0.000000e+00 1402
2 TraesCS6A01G227400 chr6D 90.716 991 52 18 1721 2705 292963998 292964954 0.000000e+00 1284
3 TraesCS6A01G227400 chr6D 94.928 138 4 3 620 755 292962922 292963058 2.110000e-51 213
4 TraesCS6A01G227400 chr6D 97.647 85 2 0 225 309 292960713 292960797 2.170000e-31 147
5 TraesCS6A01G227400 chr6B 89.495 990 41 11 1721 2705 457418960 457419891 0.000000e+00 1194
6 TraesCS6A01G227400 chr6B 92.005 863 38 8 857 1718 457418090 457418922 0.000000e+00 1182
7 TraesCS6A01G227400 chr3B 97.119 243 6 1 347 589 497096574 497096333 2.510000e-110 409
8 TraesCS6A01G227400 chr3B 96.311 244 8 1 346 589 742449918 742450160 1.510000e-107 399
9 TraesCS6A01G227400 chr3B 95.238 252 10 2 347 597 235887821 235888071 5.430000e-107 398
10 TraesCS6A01G227400 chr3B 82.126 207 29 8 18 220 811413929 811414131 1.290000e-38 171
11 TraesCS6A01G227400 chr2A 96.708 243 7 1 347 589 350400635 350400394 1.170000e-108 403
12 TraesCS6A01G227400 chr2A 96.694 242 7 1 347 588 84977529 84977769 4.200000e-108 401
13 TraesCS6A01G227400 chr2A 94.862 253 13 0 343 595 238404484 238404736 1.950000e-106 396
14 TraesCS6A01G227400 chr2A 93.359 256 14 3 339 593 753568594 753568847 2.540000e-100 375
15 TraesCS6A01G227400 chr2A 92.885 253 11 2 339 591 596394728 596394973 7.120000e-96 361
16 TraesCS6A01G227400 chr2A 89.200 250 25 2 339 588 51264802 51264555 7.270000e-81 311
17 TraesCS6A01G227400 chr7A 96.311 244 7 2 347 590 534784083 534783842 1.510000e-107 399
18 TraesCS6A01G227400 chr7A 94.231 260 13 2 347 606 722869440 722869183 1.950000e-106 396
19 TraesCS6A01G227400 chr7A 90.800 250 22 1 339 588 36630840 36631088 1.550000e-87 333
20 TraesCS6A01G227400 chr1A 95.935 246 9 1 346 591 531651545 531651301 5.430000e-107 398
21 TraesCS6A01G227400 chr1A 94.273 227 10 3 335 560 541636904 541637128 7.170000e-91 344
22 TraesCS6A01G227400 chr1A 83.085 201 31 3 20 219 542271467 542271269 2.140000e-41 180
23 TraesCS6A01G227400 chr3A 88.477 243 19 5 337 578 21649831 21650065 4.410000e-73 285
24 TraesCS6A01G227400 chr2B 85.586 222 25 7 1 219 714940531 714940748 2.710000e-55 226
25 TraesCS6A01G227400 chr3D 84.821 224 27 7 4 225 555448330 555448112 4.530000e-53 219
26 TraesCS6A01G227400 chr7D 85.922 206 21 8 1 202 626464847 626465048 2.110000e-51 213
27 TraesCS6A01G227400 chr7D 76.562 256 55 4 334 588 213971784 213971533 4.700000e-28 135
28 TraesCS6A01G227400 chr7B 83.710 221 28 8 4 219 632172487 632172270 4.570000e-48 202
29 TraesCS6A01G227400 chr7B 82.439 205 29 7 18 219 735667950 735668150 3.580000e-39 172
30 TraesCS6A01G227400 chr7B 82.439 205 27 9 18 217 735597388 735597588 1.290000e-38 171
31 TraesCS6A01G227400 chr1D 82.883 222 32 6 1 219 275677357 275677575 7.640000e-46 195


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G227400 chr6A 428073359 428076063 2704 True 4996.0 4996 100.00000 1 2705 1 chr6A.!!$R1 2704
1 TraesCS6A01G227400 chr6D 292960713 292964954 4241 False 761.5 1402 94.54925 225 2705 4 chr6D.!!$F1 2480
2 TraesCS6A01G227400 chr6B 457418090 457419891 1801 False 1188.0 1194 90.75000 857 2705 2 chr6B.!!$F1 1848

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
355 2416 0.033011 TGAGTCCTGCTACTCCCTCC 60.033 60.0 10.58 0.0 44.4 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2031 4145 0.027063 CGCGTTTCGGTGAACTGTTT 59.973 50.0 0.0 0.0 33.78 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.826260 ACATTTACAACAAAGGTGTTTTCTG 57.174 32.000 0.00 0.00 46.01 3.02
26 27 6.312672 ACATTTACAACAAAGGTGTTTTCTGC 59.687 34.615 0.00 0.00 46.01 4.26
27 28 3.951775 ACAACAAAGGTGTTTTCTGCA 57.048 38.095 0.00 0.00 46.01 4.41
28 29 4.264460 ACAACAAAGGTGTTTTCTGCAA 57.736 36.364 0.00 0.00 46.01 4.08
29 30 4.636249 ACAACAAAGGTGTTTTCTGCAAA 58.364 34.783 0.00 0.00 46.01 3.68
30 31 5.059833 ACAACAAAGGTGTTTTCTGCAAAA 58.940 33.333 0.00 0.00 46.01 2.44
31 32 5.529060 ACAACAAAGGTGTTTTCTGCAAAAA 59.471 32.000 0.00 0.00 46.01 1.94
48 49 2.143876 AAAAATATGGCAGGTCGGCT 57.856 45.000 0.00 0.00 41.89 5.52
49 50 1.680338 AAAATATGGCAGGTCGGCTC 58.320 50.000 0.00 0.00 41.89 4.70
50 51 0.179018 AAATATGGCAGGTCGGCTCC 60.179 55.000 0.00 0.00 41.89 4.70
51 52 1.056700 AATATGGCAGGTCGGCTCCT 61.057 55.000 0.00 0.00 41.89 3.69
58 59 2.506065 AGGTCGGCTCCTGATACAC 58.494 57.895 0.00 0.00 36.35 2.90
59 60 1.065928 GGTCGGCTCCTGATACACG 59.934 63.158 0.00 0.00 0.00 4.49
60 61 1.065928 GTCGGCTCCTGATACACGG 59.934 63.158 0.00 0.00 0.00 4.94
61 62 2.125326 TCGGCTCCTGATACACGGG 61.125 63.158 0.00 0.00 45.93 5.28
62 63 2.423898 CGGCTCCTGATACACGGGT 61.424 63.158 0.00 0.00 44.89 5.28
63 64 1.442148 GGCTCCTGATACACGGGTC 59.558 63.158 0.00 0.00 44.89 4.46
64 65 1.442148 GCTCCTGATACACGGGTCC 59.558 63.158 0.00 0.00 44.89 4.46
65 66 2.029307 GCTCCTGATACACGGGTCCC 62.029 65.000 0.00 0.00 44.89 4.46
76 77 2.687566 GGGTCCCGGTGGTCAGAT 60.688 66.667 0.00 0.00 0.00 2.90
77 78 1.382146 GGGTCCCGGTGGTCAGATA 60.382 63.158 0.00 0.00 0.00 1.98
78 79 1.683418 GGGTCCCGGTGGTCAGATAC 61.683 65.000 0.00 0.00 0.00 2.24
79 80 0.974010 GGTCCCGGTGGTCAGATACA 60.974 60.000 0.00 0.00 0.00 2.29
80 81 0.175073 GTCCCGGTGGTCAGATACAC 59.825 60.000 0.00 0.69 36.89 2.90
84 85 3.735181 GGTGGTCAGATACACCGTC 57.265 57.895 10.50 0.00 46.61 4.79
85 86 0.892755 GGTGGTCAGATACACCGTCA 59.107 55.000 10.50 0.00 46.61 4.35
86 87 1.274167 GGTGGTCAGATACACCGTCAA 59.726 52.381 10.50 0.00 46.61 3.18
87 88 2.093658 GGTGGTCAGATACACCGTCAAT 60.094 50.000 10.50 0.00 46.61 2.57
88 89 3.131577 GGTGGTCAGATACACCGTCAATA 59.868 47.826 10.50 0.00 46.61 1.90
89 90 4.110482 GTGGTCAGATACACCGTCAATAC 58.890 47.826 0.00 0.00 36.61 1.89
113 114 4.418392 CGTTTATACGTGGCTTAGACTGT 58.582 43.478 0.00 0.00 42.72 3.55
114 115 4.860907 CGTTTATACGTGGCTTAGACTGTT 59.139 41.667 0.00 0.00 42.72 3.16
115 116 5.346822 CGTTTATACGTGGCTTAGACTGTTT 59.653 40.000 0.00 0.00 42.72 2.83
116 117 6.128742 CGTTTATACGTGGCTTAGACTGTTTT 60.129 38.462 0.00 0.00 42.72 2.43
117 118 6.715344 TTATACGTGGCTTAGACTGTTTTG 57.285 37.500 0.00 0.00 0.00 2.44
118 119 2.914059 ACGTGGCTTAGACTGTTTTGT 58.086 42.857 0.00 0.00 0.00 2.83
119 120 2.612212 ACGTGGCTTAGACTGTTTTGTG 59.388 45.455 0.00 0.00 0.00 3.33
120 121 2.869801 CGTGGCTTAGACTGTTTTGTGA 59.130 45.455 0.00 0.00 0.00 3.58
121 122 3.303132 CGTGGCTTAGACTGTTTTGTGAC 60.303 47.826 0.00 0.00 0.00 3.67
122 123 3.625764 GTGGCTTAGACTGTTTTGTGACA 59.374 43.478 0.00 0.00 0.00 3.58
123 124 3.625764 TGGCTTAGACTGTTTTGTGACAC 59.374 43.478 0.00 0.00 0.00 3.67
124 125 3.877508 GGCTTAGACTGTTTTGTGACACT 59.122 43.478 7.20 0.00 0.00 3.55
125 126 4.335594 GGCTTAGACTGTTTTGTGACACTT 59.664 41.667 7.20 0.00 0.00 3.16
126 127 5.526111 GGCTTAGACTGTTTTGTGACACTTA 59.474 40.000 7.20 0.00 0.00 2.24
127 128 6.292919 GGCTTAGACTGTTTTGTGACACTTAG 60.293 42.308 7.20 1.12 0.00 2.18
128 129 6.292919 GCTTAGACTGTTTTGTGACACTTAGG 60.293 42.308 7.20 0.00 0.00 2.69
129 130 3.877508 AGACTGTTTTGTGACACTTAGGC 59.122 43.478 7.20 0.61 0.00 3.93
130 131 3.877508 GACTGTTTTGTGACACTTAGGCT 59.122 43.478 7.20 0.00 0.00 4.58
131 132 3.627577 ACTGTTTTGTGACACTTAGGCTG 59.372 43.478 7.20 1.20 0.00 4.85
132 133 3.616219 TGTTTTGTGACACTTAGGCTGT 58.384 40.909 7.20 0.00 0.00 4.40
133 134 4.771903 TGTTTTGTGACACTTAGGCTGTA 58.228 39.130 7.20 0.00 0.00 2.74
134 135 5.373222 TGTTTTGTGACACTTAGGCTGTAT 58.627 37.500 7.20 0.00 0.00 2.29
135 136 5.238432 TGTTTTGTGACACTTAGGCTGTATG 59.762 40.000 7.20 0.00 0.00 2.39
136 137 4.882842 TTGTGACACTTAGGCTGTATGA 57.117 40.909 7.20 0.00 0.00 2.15
137 138 5.420725 TTGTGACACTTAGGCTGTATGAT 57.579 39.130 7.20 0.00 0.00 2.45
138 139 4.758688 TGTGACACTTAGGCTGTATGATG 58.241 43.478 7.20 0.00 0.00 3.07
139 140 4.122776 GTGACACTTAGGCTGTATGATGG 58.877 47.826 0.00 0.00 0.00 3.51
140 141 3.774766 TGACACTTAGGCTGTATGATGGT 59.225 43.478 0.00 0.00 0.00 3.55
141 142 4.959839 TGACACTTAGGCTGTATGATGGTA 59.040 41.667 0.00 0.00 0.00 3.25
142 143 5.163447 TGACACTTAGGCTGTATGATGGTAC 60.163 44.000 0.00 0.00 0.00 3.34
143 144 4.962995 ACACTTAGGCTGTATGATGGTACT 59.037 41.667 0.00 0.00 0.00 2.73
144 145 5.163405 ACACTTAGGCTGTATGATGGTACTG 60.163 44.000 0.00 0.00 0.00 2.74
145 146 5.069119 CACTTAGGCTGTATGATGGTACTGA 59.931 44.000 0.00 0.00 0.00 3.41
146 147 5.841237 ACTTAGGCTGTATGATGGTACTGAT 59.159 40.000 0.00 0.00 0.00 2.90
147 148 7.010771 ACTTAGGCTGTATGATGGTACTGATA 58.989 38.462 0.00 0.00 0.00 2.15
148 149 7.676043 ACTTAGGCTGTATGATGGTACTGATAT 59.324 37.037 0.00 0.00 0.00 1.63
149 150 6.942163 AGGCTGTATGATGGTACTGATATT 57.058 37.500 0.00 0.00 0.00 1.28
150 151 6.940739 AGGCTGTATGATGGTACTGATATTC 58.059 40.000 0.00 0.00 0.00 1.75
151 152 6.498303 AGGCTGTATGATGGTACTGATATTCA 59.502 38.462 0.00 0.00 0.00 2.57
152 153 7.016563 AGGCTGTATGATGGTACTGATATTCAA 59.983 37.037 0.00 0.00 0.00 2.69
153 154 7.661437 GGCTGTATGATGGTACTGATATTCAAA 59.339 37.037 0.00 0.00 0.00 2.69
154 155 9.056005 GCTGTATGATGGTACTGATATTCAAAA 57.944 33.333 0.00 0.00 0.00 2.44
179 180 9.440761 AAAAGATGACTAATAGTACTGATCCCT 57.559 33.333 5.39 0.00 0.00 4.20
180 181 9.440761 AAAGATGACTAATAGTACTGATCCCTT 57.559 33.333 5.39 0.65 0.00 3.95
182 183 9.523168 AGATGACTAATAGTACTGATCCCTTAC 57.477 37.037 5.39 0.00 0.00 2.34
183 184 9.298250 GATGACTAATAGTACTGATCCCTTACA 57.702 37.037 5.39 0.00 0.00 2.41
184 185 9.656323 ATGACTAATAGTACTGATCCCTTACAA 57.344 33.333 5.39 0.00 0.00 2.41
185 186 8.910944 TGACTAATAGTACTGATCCCTTACAAC 58.089 37.037 5.39 0.00 0.00 3.32
186 187 7.938715 ACTAATAGTACTGATCCCTTACAACG 58.061 38.462 5.39 0.00 0.00 4.10
187 188 6.786967 AATAGTACTGATCCCTTACAACGT 57.213 37.500 5.39 0.00 0.00 3.99
188 189 4.451629 AGTACTGATCCCTTACAACGTG 57.548 45.455 0.00 0.00 0.00 4.49
189 190 3.830755 AGTACTGATCCCTTACAACGTGT 59.169 43.478 0.00 0.00 0.00 4.49
190 191 3.314541 ACTGATCCCTTACAACGTGTC 57.685 47.619 0.00 0.00 0.00 3.67
191 192 2.259618 CTGATCCCTTACAACGTGTCG 58.740 52.381 0.00 0.00 0.00 4.35
192 193 1.887854 TGATCCCTTACAACGTGTCGA 59.112 47.619 0.00 0.00 0.00 4.20
193 194 2.296752 TGATCCCTTACAACGTGTCGAA 59.703 45.455 0.00 0.00 0.00 3.71
194 195 2.886862 TCCCTTACAACGTGTCGAAA 57.113 45.000 0.00 0.00 0.00 3.46
195 196 2.472816 TCCCTTACAACGTGTCGAAAC 58.527 47.619 0.00 0.00 0.00 2.78
203 204 3.168628 CGTGTCGAAACGTGGTAGT 57.831 52.632 20.05 0.00 38.74 2.73
204 205 1.480205 CGTGTCGAAACGTGGTAGTT 58.520 50.000 20.05 0.00 38.74 2.24
205 206 1.449418 CGTGTCGAAACGTGGTAGTTC 59.551 52.381 20.05 0.00 38.74 3.01
206 207 2.462889 GTGTCGAAACGTGGTAGTTCA 58.537 47.619 0.00 0.00 32.43 3.18
207 208 3.054878 GTGTCGAAACGTGGTAGTTCAT 58.945 45.455 0.00 0.00 32.43 2.57
208 209 3.492011 GTGTCGAAACGTGGTAGTTCATT 59.508 43.478 0.00 0.00 32.43 2.57
209 210 3.491639 TGTCGAAACGTGGTAGTTCATTG 59.508 43.478 0.00 0.00 32.43 2.82
210 211 2.477375 TCGAAACGTGGTAGTTCATTGC 59.523 45.455 0.00 0.00 32.43 3.56
211 212 2.222213 CGAAACGTGGTAGTTCATTGCA 59.778 45.455 0.00 0.00 32.43 4.08
212 213 3.303461 CGAAACGTGGTAGTTCATTGCAA 60.303 43.478 0.00 0.00 32.43 4.08
213 214 4.612712 CGAAACGTGGTAGTTCATTGCAAT 60.613 41.667 5.99 5.99 32.43 3.56
214 215 4.846779 AACGTGGTAGTTCATTGCAATT 57.153 36.364 9.83 0.00 0.00 2.32
215 216 5.950758 AACGTGGTAGTTCATTGCAATTA 57.049 34.783 9.83 0.00 0.00 1.40
216 217 5.950758 ACGTGGTAGTTCATTGCAATTAA 57.049 34.783 9.83 5.45 0.00 1.40
217 218 5.695818 ACGTGGTAGTTCATTGCAATTAAC 58.304 37.500 23.08 23.08 0.00 2.01
218 219 5.472137 ACGTGGTAGTTCATTGCAATTAACT 59.528 36.000 31.18 31.18 36.90 2.24
219 220 6.016610 ACGTGGTAGTTCATTGCAATTAACTT 60.017 34.615 32.74 21.13 35.26 2.66
220 221 6.305399 CGTGGTAGTTCATTGCAATTAACTTG 59.695 38.462 32.74 18.92 35.26 3.16
221 222 6.586082 GTGGTAGTTCATTGCAATTAACTTGG 59.414 38.462 32.74 12.94 35.26 3.61
222 223 6.099341 GGTAGTTCATTGCAATTAACTTGGG 58.901 40.000 32.74 12.30 35.26 4.12
223 224 4.568956 AGTTCATTGCAATTAACTTGGGC 58.431 39.130 26.12 7.10 30.81 5.36
253 254 2.722201 CGGTAGGTCACCTCCAGGC 61.722 68.421 0.00 0.00 46.19 4.85
315 316 2.203070 GCGATGCGGAGATTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
316 317 2.247437 GCGATGCGGAGATTGGGTC 61.247 63.158 0.00 0.00 0.00 4.46
317 318 1.595382 CGATGCGGAGATTGGGTCC 60.595 63.158 0.00 0.00 0.00 4.46
318 319 1.832912 GATGCGGAGATTGGGTCCT 59.167 57.895 0.00 0.00 31.14 3.85
319 320 0.533755 GATGCGGAGATTGGGTCCTG 60.534 60.000 0.00 0.00 31.14 3.86
320 321 2.514824 GCGGAGATTGGGTCCTGC 60.515 66.667 0.00 0.00 31.14 4.85
321 322 3.036429 GCGGAGATTGGGTCCTGCT 62.036 63.158 0.00 0.00 33.51 4.24
323 324 0.035056 CGGAGATTGGGTCCTGCTTT 60.035 55.000 0.00 0.00 31.14 3.51
324 325 1.614317 CGGAGATTGGGTCCTGCTTTT 60.614 52.381 0.00 0.00 31.14 2.27
325 326 2.529632 GGAGATTGGGTCCTGCTTTTT 58.470 47.619 0.00 0.00 0.00 1.94
348 2409 5.609533 TTTAGGGTATTGAGTCCTGCTAC 57.390 43.478 0.00 0.00 32.46 3.58
349 2410 3.406512 AGGGTATTGAGTCCTGCTACT 57.593 47.619 0.00 0.00 0.00 2.57
350 2411 3.301274 AGGGTATTGAGTCCTGCTACTC 58.699 50.000 7.29 7.29 45.10 2.59
351 2412 2.365941 GGGTATTGAGTCCTGCTACTCC 59.634 54.545 10.58 0.00 44.40 3.85
352 2413 2.365941 GGTATTGAGTCCTGCTACTCCC 59.634 54.545 10.58 3.19 44.40 4.30
353 2414 2.559381 ATTGAGTCCTGCTACTCCCT 57.441 50.000 10.58 0.00 44.40 4.20
354 2415 1.853963 TTGAGTCCTGCTACTCCCTC 58.146 55.000 10.58 0.00 44.40 4.30
355 2416 0.033011 TGAGTCCTGCTACTCCCTCC 60.033 60.000 10.58 0.00 44.40 4.30
356 2417 0.033011 GAGTCCTGCTACTCCCTCCA 60.033 60.000 3.83 0.00 40.06 3.86
357 2418 0.639392 AGTCCTGCTACTCCCTCCAT 59.361 55.000 0.00 0.00 0.00 3.41
358 2419 1.008938 AGTCCTGCTACTCCCTCCATT 59.991 52.381 0.00 0.00 0.00 3.16
359 2420 1.414550 GTCCTGCTACTCCCTCCATTC 59.585 57.143 0.00 0.00 0.00 2.67
360 2421 0.761802 CCTGCTACTCCCTCCATTCC 59.238 60.000 0.00 0.00 0.00 3.01
361 2422 1.500474 CTGCTACTCCCTCCATTCCA 58.500 55.000 0.00 0.00 0.00 3.53
362 2423 1.139853 CTGCTACTCCCTCCATTCCAC 59.860 57.143 0.00 0.00 0.00 4.02
363 2424 1.204146 GCTACTCCCTCCATTCCACA 58.796 55.000 0.00 0.00 0.00 4.17
364 2425 1.559682 GCTACTCCCTCCATTCCACAA 59.440 52.381 0.00 0.00 0.00 3.33
365 2426 2.173569 GCTACTCCCTCCATTCCACAAT 59.826 50.000 0.00 0.00 0.00 2.71
366 2427 2.814805 ACTCCCTCCATTCCACAATG 57.185 50.000 0.00 0.00 39.45 2.82
367 2428 1.995542 ACTCCCTCCATTCCACAATGT 59.004 47.619 0.00 0.00 38.22 2.71
368 2429 3.189606 ACTCCCTCCATTCCACAATGTA 58.810 45.455 0.00 0.00 38.22 2.29
369 2430 3.200825 ACTCCCTCCATTCCACAATGTAG 59.799 47.826 0.00 0.00 38.22 2.74
370 2431 3.189606 TCCCTCCATTCCACAATGTAGT 58.810 45.455 0.00 0.00 38.22 2.73
371 2432 3.054434 TCCCTCCATTCCACAATGTAGTG 60.054 47.826 0.00 0.00 38.22 2.74
372 2433 2.684881 CCTCCATTCCACAATGTAGTGC 59.315 50.000 0.00 0.00 38.22 4.40
373 2434 3.614092 CTCCATTCCACAATGTAGTGCT 58.386 45.455 0.00 0.00 38.22 4.40
374 2435 4.012374 CTCCATTCCACAATGTAGTGCTT 58.988 43.478 0.00 0.00 38.22 3.91
375 2436 4.009675 TCCATTCCACAATGTAGTGCTTC 58.990 43.478 0.00 0.00 38.22 3.86
376 2437 3.129287 CCATTCCACAATGTAGTGCTTCC 59.871 47.826 0.00 0.00 38.22 3.46
377 2438 3.788227 TTCCACAATGTAGTGCTTCCT 57.212 42.857 0.00 0.00 38.18 3.36
378 2439 3.334583 TCCACAATGTAGTGCTTCCTC 57.665 47.619 0.00 0.00 38.18 3.71
379 2440 2.906389 TCCACAATGTAGTGCTTCCTCT 59.094 45.455 0.00 0.00 38.18 3.69
380 2441 4.093743 TCCACAATGTAGTGCTTCCTCTA 58.906 43.478 0.00 0.00 38.18 2.43
381 2442 4.716784 TCCACAATGTAGTGCTTCCTCTAT 59.283 41.667 0.00 0.00 38.18 1.98
382 2443 5.053145 CCACAATGTAGTGCTTCCTCTATC 58.947 45.833 0.00 0.00 38.18 2.08
383 2444 5.163364 CCACAATGTAGTGCTTCCTCTATCT 60.163 44.000 0.00 0.00 38.18 1.98
384 2445 5.982516 CACAATGTAGTGCTTCCTCTATCTC 59.017 44.000 0.00 0.00 32.04 2.75
385 2446 5.069781 ACAATGTAGTGCTTCCTCTATCTCC 59.930 44.000 0.00 0.00 0.00 3.71
386 2447 3.215151 TGTAGTGCTTCCTCTATCTCCG 58.785 50.000 0.00 0.00 0.00 4.63
387 2448 2.445682 AGTGCTTCCTCTATCTCCGT 57.554 50.000 0.00 0.00 0.00 4.69
388 2449 2.028130 AGTGCTTCCTCTATCTCCGTG 58.972 52.381 0.00 0.00 0.00 4.94
389 2450 0.747255 TGCTTCCTCTATCTCCGTGC 59.253 55.000 0.00 0.00 0.00 5.34
390 2451 1.036707 GCTTCCTCTATCTCCGTGCT 58.963 55.000 0.00 0.00 0.00 4.40
391 2452 1.410882 GCTTCCTCTATCTCCGTGCTT 59.589 52.381 0.00 0.00 0.00 3.91
392 2453 2.159028 GCTTCCTCTATCTCCGTGCTTT 60.159 50.000 0.00 0.00 0.00 3.51
393 2454 3.068307 GCTTCCTCTATCTCCGTGCTTTA 59.932 47.826 0.00 0.00 0.00 1.85
394 2455 4.441634 GCTTCCTCTATCTCCGTGCTTTAA 60.442 45.833 0.00 0.00 0.00 1.52
395 2456 4.650754 TCCTCTATCTCCGTGCTTTAAC 57.349 45.455 0.00 0.00 0.00 2.01
396 2457 4.279145 TCCTCTATCTCCGTGCTTTAACT 58.721 43.478 0.00 0.00 0.00 2.24
397 2458 4.710375 TCCTCTATCTCCGTGCTTTAACTT 59.290 41.667 0.00 0.00 0.00 2.66
398 2459 5.187186 TCCTCTATCTCCGTGCTTTAACTTT 59.813 40.000 0.00 0.00 0.00 2.66
399 2460 5.292101 CCTCTATCTCCGTGCTTTAACTTTG 59.708 44.000 0.00 0.00 0.00 2.77
400 2461 6.032956 TCTATCTCCGTGCTTTAACTTTGA 57.967 37.500 0.00 0.00 0.00 2.69
401 2462 5.867716 TCTATCTCCGTGCTTTAACTTTGAC 59.132 40.000 0.00 0.00 0.00 3.18
402 2463 3.135994 TCTCCGTGCTTTAACTTTGACC 58.864 45.455 0.00 0.00 0.00 4.02
403 2464 1.868498 TCCGTGCTTTAACTTTGACCG 59.132 47.619 0.00 0.00 0.00 4.79
404 2465 1.600485 CCGTGCTTTAACTTTGACCGT 59.400 47.619 0.00 0.00 0.00 4.83
405 2466 2.801679 CCGTGCTTTAACTTTGACCGTA 59.198 45.455 0.00 0.00 0.00 4.02
406 2467 3.248125 CCGTGCTTTAACTTTGACCGTAA 59.752 43.478 0.00 0.00 0.00 3.18
407 2468 4.260702 CCGTGCTTTAACTTTGACCGTAAA 60.261 41.667 0.00 0.00 0.00 2.01
408 2469 5.445845 CGTGCTTTAACTTTGACCGTAAAT 58.554 37.500 0.00 0.00 0.00 1.40
409 2470 5.910723 CGTGCTTTAACTTTGACCGTAAATT 59.089 36.000 0.00 0.00 0.00 1.82
410 2471 6.415573 CGTGCTTTAACTTTGACCGTAAATTT 59.584 34.615 0.00 0.00 0.00 1.82
411 2472 7.587028 CGTGCTTTAACTTTGACCGTAAATTTA 59.413 33.333 0.00 0.00 0.00 1.40
412 2473 9.235537 GTGCTTTAACTTTGACCGTAAATTTAA 57.764 29.630 0.00 0.00 0.00 1.52
413 2474 9.235537 TGCTTTAACTTTGACCGTAAATTTAAC 57.764 29.630 0.00 0.00 29.85 2.01
414 2475 9.454585 GCTTTAACTTTGACCGTAAATTTAACT 57.545 29.630 0.00 0.00 29.85 2.24
418 2479 7.733402 ACTTTGACCGTAAATTTAACTAGCA 57.267 32.000 0.00 0.00 0.00 3.49
419 2480 8.156994 ACTTTGACCGTAAATTTAACTAGCAA 57.843 30.769 0.00 0.00 0.00 3.91
420 2481 8.287503 ACTTTGACCGTAAATTTAACTAGCAAG 58.712 33.333 0.00 2.45 0.00 4.01
421 2482 7.966246 TTGACCGTAAATTTAACTAGCAAGA 57.034 32.000 0.00 0.00 0.00 3.02
422 2483 7.355332 TGACCGTAAATTTAACTAGCAAGAC 57.645 36.000 0.00 0.00 0.00 3.01
423 2484 6.369615 TGACCGTAAATTTAACTAGCAAGACC 59.630 38.462 0.00 0.00 0.00 3.85
424 2485 5.349543 ACCGTAAATTTAACTAGCAAGACCG 59.650 40.000 0.00 0.00 0.00 4.79
425 2486 5.577945 CCGTAAATTTAACTAGCAAGACCGA 59.422 40.000 0.00 0.00 0.00 4.69
426 2487 6.257193 CCGTAAATTTAACTAGCAAGACCGAT 59.743 38.462 0.00 0.00 0.00 4.18
427 2488 7.201582 CCGTAAATTTAACTAGCAAGACCGATT 60.202 37.037 0.00 0.00 0.00 3.34
428 2489 7.634817 CGTAAATTTAACTAGCAAGACCGATTG 59.365 37.037 0.00 0.00 0.00 2.67
444 2505 4.189539 TGCGGTGGGAGCAAAAAT 57.810 50.000 0.00 0.00 42.18 1.82
445 2506 2.435418 TGCGGTGGGAGCAAAAATT 58.565 47.368 0.00 0.00 42.18 1.82
446 2507 1.621992 TGCGGTGGGAGCAAAAATTA 58.378 45.000 0.00 0.00 42.18 1.40
447 2508 2.175202 TGCGGTGGGAGCAAAAATTAT 58.825 42.857 0.00 0.00 42.18 1.28
448 2509 3.357203 TGCGGTGGGAGCAAAAATTATA 58.643 40.909 0.00 0.00 42.18 0.98
449 2510 3.957497 TGCGGTGGGAGCAAAAATTATAT 59.043 39.130 0.00 0.00 42.18 0.86
450 2511 4.037446 TGCGGTGGGAGCAAAAATTATATC 59.963 41.667 0.00 0.00 42.18 1.63
451 2512 4.037446 GCGGTGGGAGCAAAAATTATATCA 59.963 41.667 0.00 0.00 34.19 2.15
452 2513 5.762045 CGGTGGGAGCAAAAATTATATCAG 58.238 41.667 0.00 0.00 0.00 2.90
453 2514 5.299279 CGGTGGGAGCAAAAATTATATCAGT 59.701 40.000 0.00 0.00 0.00 3.41
454 2515 6.507023 GGTGGGAGCAAAAATTATATCAGTG 58.493 40.000 0.00 0.00 0.00 3.66
455 2516 6.321181 GGTGGGAGCAAAAATTATATCAGTGA 59.679 38.462 0.00 0.00 0.00 3.41
456 2517 7.147915 GGTGGGAGCAAAAATTATATCAGTGAA 60.148 37.037 0.00 0.00 0.00 3.18
457 2518 8.416329 GTGGGAGCAAAAATTATATCAGTGAAT 58.584 33.333 0.00 0.00 0.00 2.57
458 2519 8.980596 TGGGAGCAAAAATTATATCAGTGAATT 58.019 29.630 0.00 0.00 0.00 2.17
459 2520 9.468532 GGGAGCAAAAATTATATCAGTGAATTC 57.531 33.333 0.00 0.00 0.00 2.17
460 2521 9.173939 GGAGCAAAAATTATATCAGTGAATTCG 57.826 33.333 0.00 0.00 0.00 3.34
461 2522 9.722056 GAGCAAAAATTATATCAGTGAATTCGT 57.278 29.630 0.00 0.00 0.00 3.85
474 2535 8.378172 TCAGTGAATTCGTATTTGAAAGAAGT 57.622 30.769 0.04 0.00 0.00 3.01
475 2536 8.836413 TCAGTGAATTCGTATTTGAAAGAAGTT 58.164 29.630 0.04 0.00 0.00 2.66
476 2537 9.450807 CAGTGAATTCGTATTTGAAAGAAGTTT 57.549 29.630 0.04 0.00 0.00 2.66
508 2569 2.112297 TTTTTCTCCCGCCGCAGT 59.888 55.556 0.00 0.00 0.00 4.40
509 2570 1.527380 TTTTTCTCCCGCCGCAGTT 60.527 52.632 0.00 0.00 0.00 3.16
510 2571 1.791103 TTTTTCTCCCGCCGCAGTTG 61.791 55.000 0.00 0.00 0.00 3.16
511 2572 4.697756 TTCTCCCGCCGCAGTTGG 62.698 66.667 0.00 0.00 0.00 3.77
518 2579 2.665185 GCCGCAGTTGGTCTCGTT 60.665 61.111 0.00 0.00 0.00 3.85
519 2580 2.954753 GCCGCAGTTGGTCTCGTTG 61.955 63.158 0.00 0.00 0.00 4.10
520 2581 2.317609 CCGCAGTTGGTCTCGTTGG 61.318 63.158 0.00 0.00 0.00 3.77
521 2582 1.594293 CGCAGTTGGTCTCGTTGGT 60.594 57.895 0.00 0.00 0.00 3.67
522 2583 1.157870 CGCAGTTGGTCTCGTTGGTT 61.158 55.000 0.00 0.00 0.00 3.67
523 2584 1.870580 CGCAGTTGGTCTCGTTGGTTA 60.871 52.381 0.00 0.00 0.00 2.85
524 2585 2.215196 GCAGTTGGTCTCGTTGGTTAA 58.785 47.619 0.00 0.00 0.00 2.01
525 2586 2.614983 GCAGTTGGTCTCGTTGGTTAAA 59.385 45.455 0.00 0.00 0.00 1.52
526 2587 3.252458 GCAGTTGGTCTCGTTGGTTAAAT 59.748 43.478 0.00 0.00 0.00 1.40
527 2588 4.261447 GCAGTTGGTCTCGTTGGTTAAATT 60.261 41.667 0.00 0.00 0.00 1.82
528 2589 5.735070 GCAGTTGGTCTCGTTGGTTAAATTT 60.735 40.000 0.00 0.00 0.00 1.82
529 2590 6.513720 GCAGTTGGTCTCGTTGGTTAAATTTA 60.514 38.462 0.00 0.00 0.00 1.40
530 2591 7.590279 CAGTTGGTCTCGTTGGTTAAATTTAT 58.410 34.615 0.00 0.00 0.00 1.40
531 2592 7.537306 CAGTTGGTCTCGTTGGTTAAATTTATG 59.463 37.037 0.00 0.00 0.00 1.90
532 2593 6.503589 TGGTCTCGTTGGTTAAATTTATGG 57.496 37.500 0.00 0.00 0.00 2.74
533 2594 6.005198 TGGTCTCGTTGGTTAAATTTATGGT 58.995 36.000 0.00 0.00 0.00 3.55
534 2595 6.149807 TGGTCTCGTTGGTTAAATTTATGGTC 59.850 38.462 0.00 0.00 0.00 4.02
535 2596 6.149807 GGTCTCGTTGGTTAAATTTATGGTCA 59.850 38.462 0.00 0.00 0.00 4.02
536 2597 7.308710 GGTCTCGTTGGTTAAATTTATGGTCAA 60.309 37.037 0.00 0.00 0.00 3.18
537 2598 8.077386 GTCTCGTTGGTTAAATTTATGGTCAAA 58.923 33.333 0.00 0.00 0.00 2.69
538 2599 8.293867 TCTCGTTGGTTAAATTTATGGTCAAAG 58.706 33.333 0.00 4.88 0.00 2.77
539 2600 7.942990 TCGTTGGTTAAATTTATGGTCAAAGT 58.057 30.769 0.00 0.00 0.00 2.66
540 2601 8.414778 TCGTTGGTTAAATTTATGGTCAAAGTT 58.585 29.630 0.00 0.00 31.36 2.66
541 2602 8.484008 CGTTGGTTAAATTTATGGTCAAAGTTG 58.516 33.333 0.00 0.00 29.44 3.16
542 2603 8.769891 GTTGGTTAAATTTATGGTCAAAGTTGG 58.230 33.333 0.00 0.00 29.44 3.77
543 2604 8.251383 TGGTTAAATTTATGGTCAAAGTTGGA 57.749 30.769 0.00 0.00 29.44 3.53
544 2605 8.145122 TGGTTAAATTTATGGTCAAAGTTGGAC 58.855 33.333 1.31 1.31 29.44 4.02
550 2611 2.928416 GTCAAAGTTGGACCTCGGG 58.072 57.895 0.00 0.00 0.00 5.14
551 2612 0.395312 GTCAAAGTTGGACCTCGGGA 59.605 55.000 0.00 0.00 0.00 5.14
552 2613 1.133363 TCAAAGTTGGACCTCGGGAA 58.867 50.000 0.00 0.00 0.00 3.97
553 2614 1.071699 TCAAAGTTGGACCTCGGGAAG 59.928 52.381 0.00 0.00 0.00 3.46
554 2615 0.250770 AAAGTTGGACCTCGGGAAGC 60.251 55.000 0.00 0.00 0.00 3.86
555 2616 2.434359 GTTGGACCTCGGGAAGCG 60.434 66.667 0.00 0.00 0.00 4.68
556 2617 4.388499 TTGGACCTCGGGAAGCGC 62.388 66.667 0.00 0.00 0.00 5.92
571 2632 3.637714 CGCGGGCGCACTATATTT 58.362 55.556 8.62 0.00 42.06 1.40
572 2633 1.938861 CGCGGGCGCACTATATTTT 59.061 52.632 8.62 0.00 42.06 1.82
573 2634 1.141645 CGCGGGCGCACTATATTTTA 58.858 50.000 8.62 0.00 42.06 1.52
574 2635 1.126113 CGCGGGCGCACTATATTTTAG 59.874 52.381 8.62 0.00 42.06 1.85
575 2636 2.409975 GCGGGCGCACTATATTTTAGA 58.590 47.619 8.62 0.00 41.49 2.10
576 2637 2.803956 GCGGGCGCACTATATTTTAGAA 59.196 45.455 8.62 0.00 41.49 2.10
577 2638 3.435671 GCGGGCGCACTATATTTTAGAAT 59.564 43.478 8.62 0.00 41.49 2.40
578 2639 4.669197 GCGGGCGCACTATATTTTAGAATG 60.669 45.833 8.62 0.00 41.49 2.67
579 2640 4.142902 CGGGCGCACTATATTTTAGAATGG 60.143 45.833 8.62 0.00 0.00 3.16
580 2641 5.001232 GGGCGCACTATATTTTAGAATGGA 58.999 41.667 10.83 0.00 0.00 3.41
581 2642 5.122396 GGGCGCACTATATTTTAGAATGGAG 59.878 44.000 10.83 0.00 0.00 3.86
582 2643 5.122396 GGCGCACTATATTTTAGAATGGAGG 59.878 44.000 10.83 0.00 0.00 4.30
583 2644 5.122396 GCGCACTATATTTTAGAATGGAGGG 59.878 44.000 0.30 0.00 0.00 4.30
584 2645 6.464222 CGCACTATATTTTAGAATGGAGGGA 58.536 40.000 0.00 0.00 0.00 4.20
585 2646 6.591834 CGCACTATATTTTAGAATGGAGGGAG 59.408 42.308 0.00 0.00 0.00 4.30
586 2647 7.454225 GCACTATATTTTAGAATGGAGGGAGT 58.546 38.462 0.00 0.00 0.00 3.85
587 2648 8.594550 GCACTATATTTTAGAATGGAGGGAGTA 58.405 37.037 0.00 0.00 0.00 2.59
588 2649 9.930693 CACTATATTTTAGAATGGAGGGAGTAC 57.069 37.037 0.00 0.00 0.00 2.73
589 2650 9.900112 ACTATATTTTAGAATGGAGGGAGTACT 57.100 33.333 0.00 0.00 0.00 2.73
645 2718 0.575390 GCGTGTACGACATGGCATAC 59.425 55.000 8.82 0.00 43.02 2.39
647 2720 1.852280 CGTGTACGACATGGCATACTG 59.148 52.381 6.32 0.00 43.02 2.74
697 2770 3.462021 GCAGCACCTAATTAGAGACCAG 58.538 50.000 14.28 0.00 0.00 4.00
726 2799 4.265904 ACACATGACACTCGTATTCCAA 57.734 40.909 0.00 0.00 0.00 3.53
756 2830 4.100707 TGGAAACACGTTAGATCCGTAG 57.899 45.455 0.00 0.00 36.65 3.51
757 2831 2.856557 GGAAACACGTTAGATCCGTAGC 59.143 50.000 0.00 0.00 36.65 3.58
758 2832 3.504863 GAAACACGTTAGATCCGTAGCA 58.495 45.455 0.00 0.00 36.65 3.49
759 2833 2.846039 ACACGTTAGATCCGTAGCAG 57.154 50.000 0.00 0.00 36.65 4.24
760 2834 2.362736 ACACGTTAGATCCGTAGCAGA 58.637 47.619 0.00 0.00 36.65 4.26
761 2835 2.950309 ACACGTTAGATCCGTAGCAGAT 59.050 45.455 0.00 0.00 36.65 2.90
762 2836 3.243101 ACACGTTAGATCCGTAGCAGATG 60.243 47.826 0.00 0.00 36.65 2.90
763 2837 2.950309 ACGTTAGATCCGTAGCAGATGT 59.050 45.455 0.00 0.00 36.65 3.06
764 2838 4.024302 CACGTTAGATCCGTAGCAGATGTA 60.024 45.833 0.00 0.00 36.65 2.29
765 2839 4.760715 ACGTTAGATCCGTAGCAGATGTAT 59.239 41.667 0.00 0.00 36.65 2.29
766 2840 5.089411 CGTTAGATCCGTAGCAGATGTATG 58.911 45.833 0.00 0.00 0.00 2.39
767 2841 5.106673 CGTTAGATCCGTAGCAGATGTATGA 60.107 44.000 0.00 0.00 0.00 2.15
768 2842 6.318628 GTTAGATCCGTAGCAGATGTATGAG 58.681 44.000 0.00 0.00 0.00 2.90
769 2843 3.192422 AGATCCGTAGCAGATGTATGAGC 59.808 47.826 0.00 0.00 0.00 4.26
770 2844 2.306847 TCCGTAGCAGATGTATGAGCA 58.693 47.619 0.00 0.00 0.00 4.26
771 2845 2.893489 TCCGTAGCAGATGTATGAGCAT 59.107 45.455 0.00 0.00 0.00 3.79
772 2846 2.991866 CCGTAGCAGATGTATGAGCATG 59.008 50.000 0.00 0.00 0.00 4.06
773 2847 3.553715 CCGTAGCAGATGTATGAGCATGT 60.554 47.826 0.00 0.00 0.00 3.21
774 2848 4.053983 CGTAGCAGATGTATGAGCATGTT 58.946 43.478 0.00 0.00 0.00 2.71
775 2849 4.509230 CGTAGCAGATGTATGAGCATGTTT 59.491 41.667 0.00 0.00 0.00 2.83
776 2850 5.691754 CGTAGCAGATGTATGAGCATGTTTA 59.308 40.000 0.00 0.00 0.00 2.01
777 2851 5.998454 AGCAGATGTATGAGCATGTTTAC 57.002 39.130 0.00 0.00 0.00 2.01
778 2852 5.678583 AGCAGATGTATGAGCATGTTTACT 58.321 37.500 0.00 0.00 0.00 2.24
779 2853 6.820335 AGCAGATGTATGAGCATGTTTACTA 58.180 36.000 0.00 0.00 0.00 1.82
780 2854 6.703607 AGCAGATGTATGAGCATGTTTACTAC 59.296 38.462 0.00 0.00 0.00 2.73
781 2855 6.479990 GCAGATGTATGAGCATGTTTACTACA 59.520 38.462 0.00 0.00 41.97 2.74
782 2856 7.517417 GCAGATGTATGAGCATGTTTACTACAC 60.517 40.741 0.00 0.00 40.19 2.90
783 2857 6.986817 AGATGTATGAGCATGTTTACTACACC 59.013 38.462 0.00 0.00 40.19 4.16
784 2858 6.043854 TGTATGAGCATGTTTACTACACCA 57.956 37.500 0.00 0.00 40.19 4.17
785 2859 6.468543 TGTATGAGCATGTTTACTACACCAA 58.531 36.000 0.00 0.00 40.19 3.67
786 2860 6.937465 TGTATGAGCATGTTTACTACACCAAA 59.063 34.615 0.00 0.00 40.19 3.28
787 2861 5.940192 TGAGCATGTTTACTACACCAAAG 57.060 39.130 0.00 0.00 40.19 2.77
788 2862 4.215399 TGAGCATGTTTACTACACCAAAGC 59.785 41.667 0.00 0.00 40.19 3.51
789 2863 4.398319 AGCATGTTTACTACACCAAAGCT 58.602 39.130 0.00 0.00 40.19 3.74
790 2864 4.827284 AGCATGTTTACTACACCAAAGCTT 59.173 37.500 0.00 0.00 40.19 3.74
791 2865 5.048713 AGCATGTTTACTACACCAAAGCTTC 60.049 40.000 0.00 0.00 40.19 3.86
792 2866 5.382303 CATGTTTACTACACCAAAGCTTCG 58.618 41.667 0.00 0.00 40.19 3.79
793 2867 4.444536 TGTTTACTACACCAAAGCTTCGT 58.555 39.130 0.00 0.00 0.00 3.85
794 2868 5.599732 TGTTTACTACACCAAAGCTTCGTA 58.400 37.500 0.00 0.00 0.00 3.43
795 2869 6.225318 TGTTTACTACACCAAAGCTTCGTAT 58.775 36.000 0.00 0.00 0.00 3.06
796 2870 6.707161 TGTTTACTACACCAAAGCTTCGTATT 59.293 34.615 0.00 0.00 0.00 1.89
797 2871 7.227116 TGTTTACTACACCAAAGCTTCGTATTT 59.773 33.333 0.00 0.00 0.00 1.40
798 2872 5.857822 ACTACACCAAAGCTTCGTATTTC 57.142 39.130 0.00 0.00 0.00 2.17
799 2873 5.302360 ACTACACCAAAGCTTCGTATTTCA 58.698 37.500 0.00 0.00 0.00 2.69
800 2874 5.761234 ACTACACCAAAGCTTCGTATTTCAA 59.239 36.000 0.00 0.00 0.00 2.69
801 2875 5.508200 ACACCAAAGCTTCGTATTTCAAA 57.492 34.783 0.00 0.00 0.00 2.69
802 2876 5.897050 ACACCAAAGCTTCGTATTTCAAAA 58.103 33.333 0.00 0.00 0.00 2.44
803 2877 6.334202 ACACCAAAGCTTCGTATTTCAAAAA 58.666 32.000 0.00 0.00 0.00 1.94
830 2904 3.619233 AAAACAAAGCTTCGCACGTAT 57.381 38.095 0.00 0.00 0.00 3.06
834 2908 4.939509 ACAAAGCTTCGCACGTATATTT 57.060 36.364 0.00 0.00 0.00 1.40
840 2914 4.570772 AGCTTCGCACGTATATTTGTCAAT 59.429 37.500 0.00 0.00 0.00 2.57
846 2920 4.963953 GCACGTATATTTGTCAATCTGTGC 59.036 41.667 0.00 0.00 41.57 4.57
904 2979 0.725117 GATAACCAACGCCCTTCACG 59.275 55.000 0.00 0.00 0.00 4.35
915 2990 4.592942 ACGCCCTTCACGTCCTATATATA 58.407 43.478 0.00 0.00 40.28 0.86
916 2991 4.397417 ACGCCCTTCACGTCCTATATATAC 59.603 45.833 0.00 0.00 40.28 1.47
917 2992 4.639310 CGCCCTTCACGTCCTATATATACT 59.361 45.833 0.00 0.00 0.00 2.12
918 2993 5.819379 CGCCCTTCACGTCCTATATATACTA 59.181 44.000 0.00 0.00 0.00 1.82
919 2994 6.485984 CGCCCTTCACGTCCTATATATACTAT 59.514 42.308 0.00 0.00 0.00 2.12
920 2995 7.658982 CGCCCTTCACGTCCTATATATACTATA 59.341 40.741 0.00 0.00 0.00 1.31
933 3008 5.885230 ATATACTATACAACGTAGCCGCA 57.115 39.130 0.00 0.00 37.70 5.69
963 3038 0.987294 CAGGCCAAGAAGAAGAGGGA 59.013 55.000 5.01 0.00 0.00 4.20
964 3039 1.352352 CAGGCCAAGAAGAAGAGGGAA 59.648 52.381 5.01 0.00 0.00 3.97
965 3040 1.632920 AGGCCAAGAAGAAGAGGGAAG 59.367 52.381 5.01 0.00 0.00 3.46
966 3041 1.458398 GCCAAGAAGAAGAGGGAAGC 58.542 55.000 0.00 0.00 0.00 3.86
967 3042 1.952839 GCCAAGAAGAAGAGGGAAGCC 60.953 57.143 0.00 0.00 0.00 4.35
1125 3200 2.487265 GGTGATCATAACGCCCATCCTT 60.487 50.000 0.00 0.00 32.47 3.36
1268 3343 0.179000 GACCTCACCTTCCGCATCAT 59.821 55.000 0.00 0.00 0.00 2.45
1269 3344 0.107508 ACCTCACCTTCCGCATCATG 60.108 55.000 0.00 0.00 0.00 3.07
1280 3355 3.204119 CATCATGGAGCCGCGCAA 61.204 61.111 8.75 0.00 0.00 4.85
1332 3407 2.102553 GCGTCAGTCTCCTACCGC 59.897 66.667 0.00 0.00 33.63 5.68
1673 3748 3.328931 AGGAAGCTTCTTGAGTCATGGAA 59.671 43.478 25.05 7.35 0.00 3.53
1718 3793 5.001874 AGTTAGCTAGGGTTTTGTGTTAGC 58.998 41.667 0.00 0.00 37.57 3.09
1724 3834 5.121925 GCTAGGGTTTTGTGTTAGCTTAGAC 59.878 44.000 0.00 0.00 35.15 2.59
1813 3926 3.542712 ACGTGTGATCTTTGCATTCAC 57.457 42.857 10.82 10.82 40.10 3.18
1837 3950 1.701431 GTGTGATTTTTCGAACGCGTG 59.299 47.619 14.98 0.00 38.98 5.34
1907 4020 2.436646 CCCCAGTCGTCCATGCAC 60.437 66.667 0.00 0.00 0.00 4.57
1933 4046 7.639113 AAATATTTAGACCGGAGCAATTGAA 57.361 32.000 9.46 0.00 0.00 2.69
1940 4054 3.716601 ACCGGAGCAATTGAACAAAAAG 58.283 40.909 9.46 0.00 0.00 2.27
2010 4124 3.503363 GCATCATCAGAGACCAACAAACA 59.497 43.478 0.00 0.00 0.00 2.83
2017 4131 4.816385 TCAGAGACCAACAAACAGTTCATC 59.184 41.667 0.00 0.00 38.74 2.92
2018 4132 4.576053 CAGAGACCAACAAACAGTTCATCA 59.424 41.667 0.00 0.00 38.74 3.07
2019 4133 5.240183 CAGAGACCAACAAACAGTTCATCAT 59.760 40.000 0.00 0.00 38.74 2.45
2020 4134 5.471456 AGAGACCAACAAACAGTTCATCATC 59.529 40.000 0.00 0.00 38.74 2.92
2021 4135 5.132502 AGACCAACAAACAGTTCATCATCA 58.867 37.500 0.00 0.00 38.74 3.07
2022 4136 5.240183 AGACCAACAAACAGTTCATCATCAG 59.760 40.000 0.00 0.00 38.74 2.90
2023 4137 5.132502 ACCAACAAACAGTTCATCATCAGA 58.867 37.500 0.00 0.00 38.74 3.27
2024 4138 5.240183 ACCAACAAACAGTTCATCATCAGAG 59.760 40.000 0.00 0.00 38.74 3.35
2025 4139 5.471116 CCAACAAACAGTTCATCATCAGAGA 59.529 40.000 0.00 0.00 38.74 3.10
2026 4140 6.369005 CAACAAACAGTTCATCATCAGAGAC 58.631 40.000 0.00 0.00 38.74 3.36
2027 4141 4.999950 ACAAACAGTTCATCATCAGAGACC 59.000 41.667 0.00 0.00 0.00 3.85
2028 4142 4.897509 AACAGTTCATCATCAGAGACCA 57.102 40.909 0.00 0.00 0.00 4.02
2029 4143 4.897509 ACAGTTCATCATCAGAGACCAA 57.102 40.909 0.00 0.00 0.00 3.67
2030 4144 4.573900 ACAGTTCATCATCAGAGACCAAC 58.426 43.478 0.00 0.00 0.00 3.77
2031 4145 4.040829 ACAGTTCATCATCAGAGACCAACA 59.959 41.667 0.00 0.00 0.00 3.33
2032 4146 4.999311 CAGTTCATCATCAGAGACCAACAA 59.001 41.667 0.00 0.00 0.00 2.83
2033 4147 5.471116 CAGTTCATCATCAGAGACCAACAAA 59.529 40.000 0.00 0.00 0.00 2.83
2034 4148 5.471456 AGTTCATCATCAGAGACCAACAAAC 59.529 40.000 0.00 0.00 0.00 2.93
2035 4149 4.971939 TCATCATCAGAGACCAACAAACA 58.028 39.130 0.00 0.00 0.00 2.83
2036 4150 4.999311 TCATCATCAGAGACCAACAAACAG 59.001 41.667 0.00 0.00 0.00 3.16
2037 4151 4.422073 TCATCAGAGACCAACAAACAGT 57.578 40.909 0.00 0.00 0.00 3.55
2038 4152 4.780815 TCATCAGAGACCAACAAACAGTT 58.219 39.130 0.00 0.00 42.42 3.16
2039 4153 4.816385 TCATCAGAGACCAACAAACAGTTC 59.184 41.667 0.00 0.00 38.74 3.01
2040 4154 4.214986 TCAGAGACCAACAAACAGTTCA 57.785 40.909 0.00 0.00 38.74 3.18
2064 4178 3.001838 CGAAACGCGAAATTGGATCCATA 59.998 43.478 17.06 7.19 44.57 2.74
2088 4202 3.891400 CATCGCATTGCACCCCCG 61.891 66.667 9.69 0.00 0.00 5.73
2454 4571 6.033513 CGACTCAAACCAGAAAAACAAAAGAC 59.966 38.462 0.00 0.00 0.00 3.01
2484 4601 7.766283 ACTAAACTACTACATTTCGACCTACC 58.234 38.462 0.00 0.00 0.00 3.18
2530 4647 1.236616 TGTGCTTGCTTCACGGGATG 61.237 55.000 0.00 0.00 37.26 3.51
2534 4651 1.019673 CTTGCTTCACGGGATGATGG 58.980 55.000 4.46 0.00 37.11 3.51
2535 4652 1.031571 TTGCTTCACGGGATGATGGC 61.032 55.000 4.46 0.00 37.11 4.40
2585 4703 4.524328 GGTTTCTGGATGAATGACCTTGTT 59.476 41.667 0.00 0.00 34.38 2.83
2627 4745 1.522580 GATCTGAGGCGAAGGGCAC 60.523 63.158 0.00 0.00 46.16 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.489757 GCAGAAAACACCTTTGTTGTAAATGTA 59.510 33.333 0.00 0.00 45.69 2.29
1 2 6.312672 GCAGAAAACACCTTTGTTGTAAATGT 59.687 34.615 0.00 0.00 45.69 2.71
2 3 6.312426 TGCAGAAAACACCTTTGTTGTAAATG 59.688 34.615 0.00 0.00 45.69 2.32
3 4 6.402222 TGCAGAAAACACCTTTGTTGTAAAT 58.598 32.000 0.00 0.00 45.69 1.40
4 5 5.784177 TGCAGAAAACACCTTTGTTGTAAA 58.216 33.333 0.00 0.00 45.69 2.01
5 6 5.392767 TGCAGAAAACACCTTTGTTGTAA 57.607 34.783 0.00 0.00 45.69 2.41
6 7 5.392767 TTGCAGAAAACACCTTTGTTGTA 57.607 34.783 0.00 0.00 45.69 2.41
7 8 3.951775 TGCAGAAAACACCTTTGTTGT 57.048 38.095 0.00 0.00 45.69 3.32
8 9 5.604010 TTTTGCAGAAAACACCTTTGTTG 57.396 34.783 0.00 0.00 45.69 3.33
29 30 2.024414 GAGCCGACCTGCCATATTTTT 58.976 47.619 0.00 0.00 0.00 1.94
30 31 1.680338 GAGCCGACCTGCCATATTTT 58.320 50.000 0.00 0.00 0.00 1.82
31 32 0.179018 GGAGCCGACCTGCCATATTT 60.179 55.000 0.00 0.00 0.00 1.40
32 33 1.056700 AGGAGCCGACCTGCCATATT 61.057 55.000 0.00 0.00 39.01 1.28
33 34 1.460305 AGGAGCCGACCTGCCATAT 60.460 57.895 0.00 0.00 39.01 1.78
34 35 2.041922 AGGAGCCGACCTGCCATA 60.042 61.111 0.00 0.00 39.01 2.74
40 41 1.384989 CGTGTATCAGGAGCCGACCT 61.385 60.000 0.00 0.00 41.43 3.85
41 42 1.065928 CGTGTATCAGGAGCCGACC 59.934 63.158 0.00 0.00 0.00 4.79
42 43 1.065928 CCGTGTATCAGGAGCCGAC 59.934 63.158 0.00 0.00 0.00 4.79
43 44 2.125326 CCCGTGTATCAGGAGCCGA 61.125 63.158 0.00 0.00 0.00 5.54
44 45 2.351336 GACCCGTGTATCAGGAGCCG 62.351 65.000 0.00 0.00 0.00 5.52
45 46 1.442148 GACCCGTGTATCAGGAGCC 59.558 63.158 0.00 0.00 0.00 4.70
46 47 1.442148 GGACCCGTGTATCAGGAGC 59.558 63.158 0.00 0.00 0.00 4.70
47 48 1.735376 CGGGACCCGTGTATCAGGAG 61.735 65.000 25.54 0.00 42.73 3.69
48 49 1.755395 CGGGACCCGTGTATCAGGA 60.755 63.158 25.54 0.00 42.73 3.86
49 50 2.792947 CCGGGACCCGTGTATCAGG 61.793 68.421 30.60 9.63 46.80 3.86
50 51 2.056223 ACCGGGACCCGTGTATCAG 61.056 63.158 30.60 16.08 46.80 2.90
51 52 2.037687 ACCGGGACCCGTGTATCA 59.962 61.111 30.60 0.00 46.80 2.15
52 53 2.497770 CACCGGGACCCGTGTATC 59.502 66.667 30.60 0.00 46.80 2.24
53 54 3.078836 CCACCGGGACCCGTGTAT 61.079 66.667 30.60 11.08 46.80 2.29
54 55 4.619320 ACCACCGGGACCCGTGTA 62.619 66.667 30.60 0.00 46.80 2.90
59 60 1.382146 TATCTGACCACCGGGACCC 60.382 63.158 6.32 0.00 38.05 4.46
60 61 0.974010 TGTATCTGACCACCGGGACC 60.974 60.000 6.32 0.00 38.05 4.46
61 62 0.175073 GTGTATCTGACCACCGGGAC 59.825 60.000 6.32 0.00 38.05 4.46
62 63 0.974010 GGTGTATCTGACCACCGGGA 60.974 60.000 6.32 0.00 41.55 5.14
63 64 1.520666 GGTGTATCTGACCACCGGG 59.479 63.158 6.32 0.00 41.55 5.73
66 67 0.892755 TGACGGTGTATCTGACCACC 59.107 55.000 15.08 15.08 46.20 4.61
67 68 2.736144 TTGACGGTGTATCTGACCAC 57.264 50.000 0.00 1.70 32.45 4.16
68 69 3.181494 CGTATTGACGGTGTATCTGACCA 60.181 47.826 0.00 0.00 45.63 4.02
69 70 3.369385 CGTATTGACGGTGTATCTGACC 58.631 50.000 0.00 0.00 45.63 4.02
92 93 6.716898 AAACAGTCTAAGCCACGTATAAAC 57.283 37.500 0.00 0.00 0.00 2.01
93 94 6.707161 ACAAAACAGTCTAAGCCACGTATAAA 59.293 34.615 0.00 0.00 0.00 1.40
94 95 6.146510 CACAAAACAGTCTAAGCCACGTATAA 59.853 38.462 0.00 0.00 0.00 0.98
95 96 5.636121 CACAAAACAGTCTAAGCCACGTATA 59.364 40.000 0.00 0.00 0.00 1.47
96 97 4.451096 CACAAAACAGTCTAAGCCACGTAT 59.549 41.667 0.00 0.00 0.00 3.06
97 98 3.805422 CACAAAACAGTCTAAGCCACGTA 59.195 43.478 0.00 0.00 0.00 3.57
98 99 2.612212 CACAAAACAGTCTAAGCCACGT 59.388 45.455 0.00 0.00 0.00 4.49
99 100 2.869801 TCACAAAACAGTCTAAGCCACG 59.130 45.455 0.00 0.00 0.00 4.94
100 101 3.625764 TGTCACAAAACAGTCTAAGCCAC 59.374 43.478 0.00 0.00 0.00 5.01
101 102 3.625764 GTGTCACAAAACAGTCTAAGCCA 59.374 43.478 0.00 0.00 0.00 4.75
102 103 3.877508 AGTGTCACAAAACAGTCTAAGCC 59.122 43.478 5.62 0.00 0.00 4.35
103 104 5.485662 AAGTGTCACAAAACAGTCTAAGC 57.514 39.130 5.62 0.00 31.59 3.09
104 105 6.292919 GCCTAAGTGTCACAAAACAGTCTAAG 60.293 42.308 5.62 0.00 31.59 2.18
105 106 5.526111 GCCTAAGTGTCACAAAACAGTCTAA 59.474 40.000 5.62 0.00 31.59 2.10
106 107 5.054477 GCCTAAGTGTCACAAAACAGTCTA 58.946 41.667 5.62 0.00 31.59 2.59
107 108 3.877508 GCCTAAGTGTCACAAAACAGTCT 59.122 43.478 5.62 0.00 31.59 3.24
108 109 3.877508 AGCCTAAGTGTCACAAAACAGTC 59.122 43.478 5.62 0.00 31.59 3.51
109 110 3.627577 CAGCCTAAGTGTCACAAAACAGT 59.372 43.478 5.62 0.00 34.25 3.55
110 111 3.627577 ACAGCCTAAGTGTCACAAAACAG 59.372 43.478 5.62 0.00 0.00 3.16
111 112 3.616219 ACAGCCTAAGTGTCACAAAACA 58.384 40.909 5.62 0.00 0.00 2.83
112 113 5.468746 TCATACAGCCTAAGTGTCACAAAAC 59.531 40.000 5.62 0.00 0.00 2.43
113 114 5.616270 TCATACAGCCTAAGTGTCACAAAA 58.384 37.500 5.62 0.00 0.00 2.44
114 115 5.222079 TCATACAGCCTAAGTGTCACAAA 57.778 39.130 5.62 0.00 0.00 2.83
115 116 4.882842 TCATACAGCCTAAGTGTCACAA 57.117 40.909 5.62 0.00 0.00 3.33
116 117 4.383010 CCATCATACAGCCTAAGTGTCACA 60.383 45.833 5.62 0.00 0.00 3.58
117 118 4.122776 CCATCATACAGCCTAAGTGTCAC 58.877 47.826 0.00 0.00 0.00 3.67
118 119 3.774766 ACCATCATACAGCCTAAGTGTCA 59.225 43.478 0.00 0.00 0.00 3.58
119 120 4.408182 ACCATCATACAGCCTAAGTGTC 57.592 45.455 0.00 0.00 0.00 3.67
120 121 4.962995 AGTACCATCATACAGCCTAAGTGT 59.037 41.667 0.00 0.00 0.00 3.55
121 122 5.069119 TCAGTACCATCATACAGCCTAAGTG 59.931 44.000 0.00 0.00 0.00 3.16
122 123 5.208890 TCAGTACCATCATACAGCCTAAGT 58.791 41.667 0.00 0.00 0.00 2.24
123 124 5.791336 TCAGTACCATCATACAGCCTAAG 57.209 43.478 0.00 0.00 0.00 2.18
124 125 8.435931 AATATCAGTACCATCATACAGCCTAA 57.564 34.615 0.00 0.00 0.00 2.69
125 126 7.673926 TGAATATCAGTACCATCATACAGCCTA 59.326 37.037 0.00 0.00 0.00 3.93
126 127 6.498303 TGAATATCAGTACCATCATACAGCCT 59.502 38.462 0.00 0.00 0.00 4.58
127 128 6.701340 TGAATATCAGTACCATCATACAGCC 58.299 40.000 0.00 0.00 0.00 4.85
128 129 8.607441 TTTGAATATCAGTACCATCATACAGC 57.393 34.615 0.00 0.00 0.00 4.40
153 154 9.440761 AGGGATCAGTACTATTAGTCATCTTTT 57.559 33.333 0.00 0.00 0.00 2.27
154 155 9.440761 AAGGGATCAGTACTATTAGTCATCTTT 57.559 33.333 0.00 0.00 0.00 2.52
156 157 9.523168 GTAAGGGATCAGTACTATTAGTCATCT 57.477 37.037 0.00 0.00 0.00 2.90
157 158 9.298250 TGTAAGGGATCAGTACTATTAGTCATC 57.702 37.037 0.00 0.00 0.00 2.92
158 159 9.656323 TTGTAAGGGATCAGTACTATTAGTCAT 57.344 33.333 0.00 0.00 0.00 3.06
159 160 8.910944 GTTGTAAGGGATCAGTACTATTAGTCA 58.089 37.037 0.00 0.00 0.00 3.41
160 161 8.074972 CGTTGTAAGGGATCAGTACTATTAGTC 58.925 40.741 0.00 0.00 0.00 2.59
161 162 7.559170 ACGTTGTAAGGGATCAGTACTATTAGT 59.441 37.037 0.00 1.30 0.00 2.24
162 163 7.861372 CACGTTGTAAGGGATCAGTACTATTAG 59.139 40.741 0.00 0.00 0.00 1.73
163 164 7.340232 ACACGTTGTAAGGGATCAGTACTATTA 59.660 37.037 0.00 0.00 0.00 0.98
164 165 6.154021 ACACGTTGTAAGGGATCAGTACTATT 59.846 38.462 0.00 0.00 0.00 1.73
165 166 5.655532 ACACGTTGTAAGGGATCAGTACTAT 59.344 40.000 0.00 0.00 0.00 2.12
166 167 5.012239 ACACGTTGTAAGGGATCAGTACTA 58.988 41.667 0.00 0.00 0.00 1.82
167 168 3.830755 ACACGTTGTAAGGGATCAGTACT 59.169 43.478 0.00 0.00 0.00 2.73
168 169 4.171754 GACACGTTGTAAGGGATCAGTAC 58.828 47.826 0.00 0.00 0.00 2.73
169 170 3.119743 CGACACGTTGTAAGGGATCAGTA 60.120 47.826 0.00 0.00 0.00 2.74
170 171 2.352421 CGACACGTTGTAAGGGATCAGT 60.352 50.000 0.00 0.00 0.00 3.41
171 172 2.094906 TCGACACGTTGTAAGGGATCAG 60.095 50.000 0.00 0.00 0.00 2.90
172 173 1.887854 TCGACACGTTGTAAGGGATCA 59.112 47.619 0.00 0.00 0.00 2.92
173 174 2.642139 TCGACACGTTGTAAGGGATC 57.358 50.000 0.00 0.00 0.00 3.36
174 175 3.062042 GTTTCGACACGTTGTAAGGGAT 58.938 45.455 0.00 0.00 0.00 3.85
175 176 2.472816 GTTTCGACACGTTGTAAGGGA 58.527 47.619 0.00 0.00 0.00 4.20
176 177 1.190763 CGTTTCGACACGTTGTAAGGG 59.809 52.381 15.68 0.00 35.34 3.95
177 178 2.548497 CGTTTCGACACGTTGTAAGG 57.452 50.000 15.68 0.00 35.34 2.69
185 186 1.449418 GAACTACCACGTTTCGACACG 59.551 52.381 21.61 21.61 46.04 4.49
186 187 2.462889 TGAACTACCACGTTTCGACAC 58.537 47.619 0.00 0.00 0.00 3.67
187 188 2.867287 TGAACTACCACGTTTCGACA 57.133 45.000 0.00 0.00 0.00 4.35
188 189 3.663493 GCAATGAACTACCACGTTTCGAC 60.663 47.826 0.00 0.00 0.00 4.20
189 190 2.477375 GCAATGAACTACCACGTTTCGA 59.523 45.455 0.00 0.00 0.00 3.71
190 191 2.222213 TGCAATGAACTACCACGTTTCG 59.778 45.455 0.00 0.00 0.00 3.46
191 192 3.889196 TGCAATGAACTACCACGTTTC 57.111 42.857 0.00 0.00 0.00 2.78
192 193 4.846779 ATTGCAATGAACTACCACGTTT 57.153 36.364 12.09 0.00 0.00 3.60
193 194 4.846779 AATTGCAATGAACTACCACGTT 57.153 36.364 13.82 0.00 0.00 3.99
194 195 5.472137 AGTTAATTGCAATGAACTACCACGT 59.528 36.000 32.36 13.33 38.14 4.49
195 196 5.938322 AGTTAATTGCAATGAACTACCACG 58.062 37.500 32.36 0.00 38.14 4.94
196 197 6.586082 CCAAGTTAATTGCAATGAACTACCAC 59.414 38.462 33.11 12.95 38.81 4.16
197 198 6.295011 CCCAAGTTAATTGCAATGAACTACCA 60.295 38.462 33.11 1.25 38.81 3.25
198 199 6.099341 CCCAAGTTAATTGCAATGAACTACC 58.901 40.000 33.11 13.16 38.81 3.18
199 200 5.576774 GCCCAAGTTAATTGCAATGAACTAC 59.423 40.000 33.11 21.92 38.81 2.73
200 201 5.621104 CGCCCAAGTTAATTGCAATGAACTA 60.621 40.000 33.11 12.59 38.81 2.24
201 202 4.568956 GCCCAAGTTAATTGCAATGAACT 58.431 39.130 29.40 29.40 40.97 3.01
202 203 3.367630 CGCCCAAGTTAATTGCAATGAAC 59.632 43.478 26.33 26.33 37.60 3.18
203 204 3.583806 CGCCCAAGTTAATTGCAATGAA 58.416 40.909 13.82 9.21 37.60 2.57
204 205 2.094286 CCGCCCAAGTTAATTGCAATGA 60.094 45.455 13.82 1.45 37.60 2.57
205 206 2.270047 CCGCCCAAGTTAATTGCAATG 58.730 47.619 13.82 0.00 37.60 2.82
206 207 1.206849 CCCGCCCAAGTTAATTGCAAT 59.793 47.619 5.99 5.99 37.60 3.56
207 208 0.605589 CCCGCCCAAGTTAATTGCAA 59.394 50.000 0.00 0.00 37.60 4.08
208 209 1.254284 CCCCGCCCAAGTTAATTGCA 61.254 55.000 0.00 0.00 37.60 4.08
209 210 1.515487 CCCCGCCCAAGTTAATTGC 59.485 57.895 0.00 0.00 37.60 3.56
210 211 0.323908 TCCCCCGCCCAAGTTAATTG 60.324 55.000 0.00 0.00 38.74 2.32
211 212 0.634465 ATCCCCCGCCCAAGTTAATT 59.366 50.000 0.00 0.00 0.00 1.40
212 213 0.106217 CATCCCCCGCCCAAGTTAAT 60.106 55.000 0.00 0.00 0.00 1.40
213 214 1.304952 CATCCCCCGCCCAAGTTAA 59.695 57.895 0.00 0.00 0.00 2.01
214 215 1.917336 GACATCCCCCGCCCAAGTTA 61.917 60.000 0.00 0.00 0.00 2.24
215 216 3.264845 ACATCCCCCGCCCAAGTT 61.265 61.111 0.00 0.00 0.00 2.66
216 217 3.728373 GACATCCCCCGCCCAAGT 61.728 66.667 0.00 0.00 0.00 3.16
217 218 4.856801 CGACATCCCCCGCCCAAG 62.857 72.222 0.00 0.00 0.00 3.61
223 224 4.280494 CTACCGCGACATCCCCCG 62.280 72.222 8.23 0.00 0.00 5.73
324 325 5.514500 AGCAGGACTCAATACCCTAAAAA 57.486 39.130 0.00 0.00 0.00 1.94
325 326 5.724854 AGTAGCAGGACTCAATACCCTAAAA 59.275 40.000 0.00 0.00 0.00 1.52
326 327 5.278061 AGTAGCAGGACTCAATACCCTAAA 58.722 41.667 0.00 0.00 0.00 1.85
327 328 4.880164 AGTAGCAGGACTCAATACCCTAA 58.120 43.478 0.00 0.00 0.00 2.69
329 330 3.301274 GAGTAGCAGGACTCAATACCCT 58.699 50.000 8.17 0.00 44.49 4.34
330 331 2.365941 GGAGTAGCAGGACTCAATACCC 59.634 54.545 13.45 0.00 46.51 3.69
331 332 2.365941 GGGAGTAGCAGGACTCAATACC 59.634 54.545 13.45 4.12 46.51 2.73
333 334 3.567397 GAGGGAGTAGCAGGACTCAATA 58.433 50.000 13.45 0.00 46.51 1.90
348 2409 2.814805 ACATTGTGGAATGGAGGGAG 57.185 50.000 0.00 0.00 43.00 4.30
349 2410 3.931907 CTACATTGTGGAATGGAGGGA 57.068 47.619 0.00 0.00 44.23 4.20
353 2414 3.719268 AGCACTACATTGTGGAATGGA 57.281 42.857 7.20 0.00 43.00 3.41
354 2415 3.129287 GGAAGCACTACATTGTGGAATGG 59.871 47.826 7.20 0.00 43.00 3.16
355 2416 4.012374 AGGAAGCACTACATTGTGGAATG 58.988 43.478 7.20 0.00 44.11 2.67
356 2417 4.018960 AGAGGAAGCACTACATTGTGGAAT 60.019 41.667 7.20 0.00 38.31 3.01
357 2418 3.327757 AGAGGAAGCACTACATTGTGGAA 59.672 43.478 7.20 0.00 38.31 3.53
358 2419 2.906389 AGAGGAAGCACTACATTGTGGA 59.094 45.455 7.20 0.00 38.31 4.02
359 2420 3.340814 AGAGGAAGCACTACATTGTGG 57.659 47.619 0.00 0.00 38.31 4.17
360 2421 5.911752 AGATAGAGGAAGCACTACATTGTG 58.088 41.667 0.00 0.00 40.62 3.33
361 2422 5.069781 GGAGATAGAGGAAGCACTACATTGT 59.930 44.000 0.00 0.00 0.00 2.71
362 2423 5.537188 GGAGATAGAGGAAGCACTACATTG 58.463 45.833 0.00 0.00 0.00 2.82
363 2424 4.279671 CGGAGATAGAGGAAGCACTACATT 59.720 45.833 0.00 0.00 0.00 2.71
364 2425 3.823873 CGGAGATAGAGGAAGCACTACAT 59.176 47.826 0.00 0.00 0.00 2.29
365 2426 3.215151 CGGAGATAGAGGAAGCACTACA 58.785 50.000 0.00 0.00 0.00 2.74
366 2427 3.003897 CACGGAGATAGAGGAAGCACTAC 59.996 52.174 0.00 0.00 0.00 2.73
367 2428 3.215151 CACGGAGATAGAGGAAGCACTA 58.785 50.000 0.00 0.00 0.00 2.74
368 2429 2.028130 CACGGAGATAGAGGAAGCACT 58.972 52.381 0.00 0.00 0.00 4.40
369 2430 1.537135 GCACGGAGATAGAGGAAGCAC 60.537 57.143 0.00 0.00 0.00 4.40
370 2431 0.747255 GCACGGAGATAGAGGAAGCA 59.253 55.000 0.00 0.00 0.00 3.91
371 2432 1.036707 AGCACGGAGATAGAGGAAGC 58.963 55.000 0.00 0.00 0.00 3.86
372 2433 3.810310 AAAGCACGGAGATAGAGGAAG 57.190 47.619 0.00 0.00 0.00 3.46
373 2434 4.710375 AGTTAAAGCACGGAGATAGAGGAA 59.290 41.667 0.00 0.00 0.00 3.36
374 2435 4.279145 AGTTAAAGCACGGAGATAGAGGA 58.721 43.478 0.00 0.00 0.00 3.71
375 2436 4.657436 AGTTAAAGCACGGAGATAGAGG 57.343 45.455 0.00 0.00 0.00 3.69
376 2437 6.035112 GTCAAAGTTAAAGCACGGAGATAGAG 59.965 42.308 0.00 0.00 0.00 2.43
377 2438 5.867716 GTCAAAGTTAAAGCACGGAGATAGA 59.132 40.000 0.00 0.00 0.00 1.98
378 2439 5.063564 GGTCAAAGTTAAAGCACGGAGATAG 59.936 44.000 0.00 0.00 0.00 2.08
379 2440 4.933400 GGTCAAAGTTAAAGCACGGAGATA 59.067 41.667 0.00 0.00 0.00 1.98
380 2441 3.751698 GGTCAAAGTTAAAGCACGGAGAT 59.248 43.478 0.00 0.00 0.00 2.75
381 2442 3.135994 GGTCAAAGTTAAAGCACGGAGA 58.864 45.455 0.00 0.00 0.00 3.71
382 2443 2.096417 CGGTCAAAGTTAAAGCACGGAG 60.096 50.000 0.00 0.00 0.00 4.63
383 2444 1.868498 CGGTCAAAGTTAAAGCACGGA 59.132 47.619 0.00 0.00 0.00 4.69
384 2445 1.600485 ACGGTCAAAGTTAAAGCACGG 59.400 47.619 0.00 0.00 0.00 4.94
385 2446 4.455917 TTACGGTCAAAGTTAAAGCACG 57.544 40.909 0.00 0.00 0.00 5.34
386 2447 7.688478 AAATTTACGGTCAAAGTTAAAGCAC 57.312 32.000 0.00 0.00 0.00 4.40
387 2448 9.235537 GTTAAATTTACGGTCAAAGTTAAAGCA 57.764 29.630 11.14 0.00 38.74 3.91
388 2449 9.454585 AGTTAAATTTACGGTCAAAGTTAAAGC 57.545 29.630 11.14 4.21 38.74 3.51
392 2453 9.270640 TGCTAGTTAAATTTACGGTCAAAGTTA 57.729 29.630 0.00 0.00 29.44 2.24
393 2454 8.156994 TGCTAGTTAAATTTACGGTCAAAGTT 57.843 30.769 0.00 0.00 31.36 2.66
394 2455 7.733402 TGCTAGTTAAATTTACGGTCAAAGT 57.267 32.000 0.00 0.00 0.00 2.66
395 2456 8.500773 TCTTGCTAGTTAAATTTACGGTCAAAG 58.499 33.333 0.00 0.00 0.00 2.77
396 2457 8.284693 GTCTTGCTAGTTAAATTTACGGTCAAA 58.715 33.333 0.00 0.00 0.00 2.69
397 2458 7.095102 GGTCTTGCTAGTTAAATTTACGGTCAA 60.095 37.037 0.00 0.00 0.00 3.18
398 2459 6.369615 GGTCTTGCTAGTTAAATTTACGGTCA 59.630 38.462 0.00 0.00 0.00 4.02
399 2460 6.454715 CGGTCTTGCTAGTTAAATTTACGGTC 60.455 42.308 0.00 0.00 0.00 4.79
400 2461 5.349543 CGGTCTTGCTAGTTAAATTTACGGT 59.650 40.000 0.00 0.00 0.00 4.83
401 2462 5.577945 TCGGTCTTGCTAGTTAAATTTACGG 59.422 40.000 0.00 0.00 0.00 4.02
402 2463 6.636666 TCGGTCTTGCTAGTTAAATTTACG 57.363 37.500 0.00 0.00 0.00 3.18
403 2464 7.428472 GCAATCGGTCTTGCTAGTTAAATTTAC 59.572 37.037 0.00 0.00 46.32 2.01
404 2465 7.469260 GCAATCGGTCTTGCTAGTTAAATTTA 58.531 34.615 9.91 0.00 46.32 1.40
405 2466 6.322491 GCAATCGGTCTTGCTAGTTAAATTT 58.678 36.000 9.91 0.00 46.32 1.82
406 2467 5.880341 GCAATCGGTCTTGCTAGTTAAATT 58.120 37.500 9.91 0.00 46.32 1.82
407 2468 5.485662 GCAATCGGTCTTGCTAGTTAAAT 57.514 39.130 9.91 0.00 46.32 1.40
408 2469 4.939509 GCAATCGGTCTTGCTAGTTAAA 57.060 40.909 9.91 0.00 46.32 1.52
423 2484 1.861542 TTTTGCTCCCACCGCAATCG 61.862 55.000 0.00 0.00 45.67 3.34
424 2485 0.316841 TTTTTGCTCCCACCGCAATC 59.683 50.000 0.00 0.00 45.67 2.67
425 2486 0.975887 ATTTTTGCTCCCACCGCAAT 59.024 45.000 0.00 0.00 45.67 3.56
426 2487 0.755686 AATTTTTGCTCCCACCGCAA 59.244 45.000 0.00 0.00 44.83 4.85
427 2488 1.621992 TAATTTTTGCTCCCACCGCA 58.378 45.000 0.00 0.00 35.22 5.69
428 2489 2.959507 ATAATTTTTGCTCCCACCGC 57.040 45.000 0.00 0.00 0.00 5.68
429 2490 5.299279 ACTGATATAATTTTTGCTCCCACCG 59.701 40.000 0.00 0.00 0.00 4.94
430 2491 6.321181 TCACTGATATAATTTTTGCTCCCACC 59.679 38.462 0.00 0.00 0.00 4.61
431 2492 7.333528 TCACTGATATAATTTTTGCTCCCAC 57.666 36.000 0.00 0.00 0.00 4.61
432 2493 7.953005 TTCACTGATATAATTTTTGCTCCCA 57.047 32.000 0.00 0.00 0.00 4.37
433 2494 9.468532 GAATTCACTGATATAATTTTTGCTCCC 57.531 33.333 0.00 0.00 0.00 4.30
434 2495 9.173939 CGAATTCACTGATATAATTTTTGCTCC 57.826 33.333 6.22 0.00 0.00 4.70
435 2496 9.722056 ACGAATTCACTGATATAATTTTTGCTC 57.278 29.630 6.22 0.00 0.00 4.26
448 2509 9.003658 ACTTCTTTCAAATACGAATTCACTGAT 57.996 29.630 6.22 0.00 0.00 2.90
449 2510 8.378172 ACTTCTTTCAAATACGAATTCACTGA 57.622 30.769 6.22 0.00 0.00 3.41
450 2511 9.450807 AAACTTCTTTCAAATACGAATTCACTG 57.549 29.630 6.22 0.00 0.00 3.66
491 2552 1.527380 AACTGCGGCGGGAGAAAAA 60.527 52.632 19.55 0.00 35.29 1.94
492 2553 2.112297 AACTGCGGCGGGAGAAAA 59.888 55.556 19.55 0.00 35.29 2.29
493 2554 2.668212 CAACTGCGGCGGGAGAAA 60.668 61.111 19.55 0.00 35.29 2.52
494 2555 4.697756 CCAACTGCGGCGGGAGAA 62.698 66.667 19.55 0.00 35.29 2.87
501 2562 2.665185 AACGAGACCAACTGCGGC 60.665 61.111 0.00 0.00 0.00 6.53
502 2563 2.317609 CCAACGAGACCAACTGCGG 61.318 63.158 0.00 0.00 0.00 5.69
503 2564 1.157870 AACCAACGAGACCAACTGCG 61.158 55.000 0.00 0.00 0.00 5.18
504 2565 1.873698 TAACCAACGAGACCAACTGC 58.126 50.000 0.00 0.00 0.00 4.40
505 2566 5.432885 AATTTAACCAACGAGACCAACTG 57.567 39.130 0.00 0.00 0.00 3.16
506 2567 7.308951 CCATAAATTTAACCAACGAGACCAACT 60.309 37.037 1.21 0.00 0.00 3.16
507 2568 6.804783 CCATAAATTTAACCAACGAGACCAAC 59.195 38.462 1.21 0.00 0.00 3.77
508 2569 6.490721 ACCATAAATTTAACCAACGAGACCAA 59.509 34.615 1.21 0.00 0.00 3.67
509 2570 6.005198 ACCATAAATTTAACCAACGAGACCA 58.995 36.000 1.21 0.00 0.00 4.02
510 2571 6.149807 TGACCATAAATTTAACCAACGAGACC 59.850 38.462 1.21 0.00 0.00 3.85
511 2572 7.136289 TGACCATAAATTTAACCAACGAGAC 57.864 36.000 1.21 0.00 0.00 3.36
512 2573 7.747155 TTGACCATAAATTTAACCAACGAGA 57.253 32.000 1.21 0.00 0.00 4.04
513 2574 8.079809 ACTTTGACCATAAATTTAACCAACGAG 58.920 33.333 1.21 3.35 0.00 4.18
514 2575 7.942990 ACTTTGACCATAAATTTAACCAACGA 58.057 30.769 1.21 0.00 0.00 3.85
515 2576 8.484008 CAACTTTGACCATAAATTTAACCAACG 58.516 33.333 1.21 5.06 0.00 4.10
516 2577 8.769891 CCAACTTTGACCATAAATTTAACCAAC 58.230 33.333 1.21 0.00 0.00 3.77
517 2578 8.705594 TCCAACTTTGACCATAAATTTAACCAA 58.294 29.630 1.21 2.19 0.00 3.67
518 2579 8.145122 GTCCAACTTTGACCATAAATTTAACCA 58.855 33.333 1.21 0.00 0.00 3.67
519 2580 7.601130 GGTCCAACTTTGACCATAAATTTAACC 59.399 37.037 1.21 0.00 38.76 2.85
520 2581 8.364894 AGGTCCAACTTTGACCATAAATTTAAC 58.635 33.333 13.24 0.00 41.22 2.01
521 2582 8.485578 AGGTCCAACTTTGACCATAAATTTAA 57.514 30.769 13.24 0.00 41.22 1.52
522 2583 7.094549 CGAGGTCCAACTTTGACCATAAATTTA 60.095 37.037 13.24 0.00 41.22 1.40
523 2584 6.294508 CGAGGTCCAACTTTGACCATAAATTT 60.295 38.462 13.24 0.00 41.22 1.82
524 2585 5.183140 CGAGGTCCAACTTTGACCATAAATT 59.817 40.000 13.24 0.00 41.22 1.82
525 2586 4.700213 CGAGGTCCAACTTTGACCATAAAT 59.300 41.667 13.24 0.00 41.22 1.40
526 2587 4.069304 CGAGGTCCAACTTTGACCATAAA 58.931 43.478 13.24 0.00 41.22 1.40
527 2588 3.558321 CCGAGGTCCAACTTTGACCATAA 60.558 47.826 13.24 0.00 41.22 1.90
528 2589 2.027561 CCGAGGTCCAACTTTGACCATA 60.028 50.000 13.24 0.00 41.22 2.74
529 2590 1.271379 CCGAGGTCCAACTTTGACCAT 60.271 52.381 13.24 0.72 41.22 3.55
530 2591 0.107831 CCGAGGTCCAACTTTGACCA 59.892 55.000 13.24 0.00 41.22 4.02
531 2592 0.605589 CCCGAGGTCCAACTTTGACC 60.606 60.000 4.16 4.16 39.18 4.02
532 2593 0.395312 TCCCGAGGTCCAACTTTGAC 59.605 55.000 0.00 0.00 0.00 3.18
533 2594 1.071699 CTTCCCGAGGTCCAACTTTGA 59.928 52.381 0.00 0.00 0.00 2.69
534 2595 1.523758 CTTCCCGAGGTCCAACTTTG 58.476 55.000 0.00 0.00 0.00 2.77
535 2596 0.250770 GCTTCCCGAGGTCCAACTTT 60.251 55.000 0.00 0.00 0.00 2.66
536 2597 1.375326 GCTTCCCGAGGTCCAACTT 59.625 57.895 0.00 0.00 0.00 2.66
537 2598 2.943978 CGCTTCCCGAGGTCCAACT 61.944 63.158 0.00 0.00 40.02 3.16
538 2599 2.434359 CGCTTCCCGAGGTCCAAC 60.434 66.667 0.00 0.00 40.02 3.77
539 2600 4.388499 GCGCTTCCCGAGGTCCAA 62.388 66.667 0.00 0.00 40.02 3.53
554 2615 1.126113 CTAAAATATAGTGCGCCCGCG 59.874 52.381 4.18 4.36 45.51 6.46
555 2616 2.409975 TCTAAAATATAGTGCGCCCGC 58.590 47.619 4.18 5.60 42.35 6.13
556 2617 4.142902 CCATTCTAAAATATAGTGCGCCCG 60.143 45.833 4.18 0.00 0.00 6.13
557 2618 5.001232 TCCATTCTAAAATATAGTGCGCCC 58.999 41.667 4.18 0.00 0.00 6.13
558 2619 5.122396 CCTCCATTCTAAAATATAGTGCGCC 59.878 44.000 4.18 0.00 0.00 6.53
559 2620 5.122396 CCCTCCATTCTAAAATATAGTGCGC 59.878 44.000 0.00 0.00 0.00 6.09
560 2621 6.464222 TCCCTCCATTCTAAAATATAGTGCG 58.536 40.000 0.00 0.00 0.00 5.34
561 2622 7.454225 ACTCCCTCCATTCTAAAATATAGTGC 58.546 38.462 0.00 0.00 0.00 4.40
562 2623 9.930693 GTACTCCCTCCATTCTAAAATATAGTG 57.069 37.037 0.00 0.00 0.00 2.74
563 2624 9.900112 AGTACTCCCTCCATTCTAAAATATAGT 57.100 33.333 0.00 0.00 0.00 2.12
600 2661 9.659830 CATGTACGCACGTGTGTATATATATAT 57.340 33.333 35.56 21.40 39.64 0.86
601 2662 7.641020 GCATGTACGCACGTGTGTATATATATA 59.359 37.037 35.56 20.36 42.66 0.86
602 2663 6.471198 GCATGTACGCACGTGTGTATATATAT 59.529 38.462 35.56 24.39 42.66 0.86
603 2664 5.796437 GCATGTACGCACGTGTGTATATATA 59.204 40.000 35.56 23.60 42.66 0.86
604 2665 4.619760 GCATGTACGCACGTGTGTATATAT 59.380 41.667 35.56 27.91 42.66 0.86
609 2670 1.338526 CGCATGTACGCACGTGTGTA 61.339 55.000 32.21 32.21 43.95 2.90
611 2672 2.093799 CGCATGTACGCACGTGTG 59.906 61.111 26.70 26.70 43.63 3.82
622 2683 1.358725 GCCATGTCGTACACGCATGT 61.359 55.000 24.04 0.00 44.39 3.21
623 2684 1.348250 GCCATGTCGTACACGCATG 59.652 57.895 21.54 21.54 44.89 4.06
726 2799 7.094933 GGATCTAACGTGTTTCCACAGTTTAAT 60.095 37.037 0.00 4.24 41.93 1.40
755 2829 5.678583 AGTAAACATGCTCATACATCTGCT 58.321 37.500 0.00 0.00 0.00 4.24
756 2830 5.998454 AGTAAACATGCTCATACATCTGC 57.002 39.130 0.00 0.00 0.00 4.26
757 2831 7.042456 GGTGTAGTAAACATGCTCATACATCTG 60.042 40.741 0.00 0.00 41.10 2.90
758 2832 6.986817 GGTGTAGTAAACATGCTCATACATCT 59.013 38.462 0.00 0.00 41.10 2.90
759 2833 6.761242 TGGTGTAGTAAACATGCTCATACATC 59.239 38.462 0.00 0.00 41.10 3.06
760 2834 6.649155 TGGTGTAGTAAACATGCTCATACAT 58.351 36.000 0.00 0.00 41.10 2.29
761 2835 6.043854 TGGTGTAGTAAACATGCTCATACA 57.956 37.500 0.00 0.00 41.10 2.29
762 2836 6.978343 TTGGTGTAGTAAACATGCTCATAC 57.022 37.500 0.00 0.00 41.10 2.39
763 2837 6.093495 GCTTTGGTGTAGTAAACATGCTCATA 59.907 38.462 0.00 0.00 41.10 2.15
764 2838 5.106157 GCTTTGGTGTAGTAAACATGCTCAT 60.106 40.000 0.00 0.00 41.10 2.90
765 2839 4.215399 GCTTTGGTGTAGTAAACATGCTCA 59.785 41.667 0.00 0.00 41.10 4.26
766 2840 4.455877 AGCTTTGGTGTAGTAAACATGCTC 59.544 41.667 0.00 0.00 41.10 4.26
767 2841 4.398319 AGCTTTGGTGTAGTAAACATGCT 58.602 39.130 0.00 0.00 41.10 3.79
768 2842 4.766404 AGCTTTGGTGTAGTAAACATGC 57.234 40.909 0.00 0.00 41.10 4.06
769 2843 5.049680 ACGAAGCTTTGGTGTAGTAAACATG 60.050 40.000 18.07 0.00 41.10 3.21
770 2844 5.061179 ACGAAGCTTTGGTGTAGTAAACAT 58.939 37.500 18.07 0.00 41.10 2.71
771 2845 4.444536 ACGAAGCTTTGGTGTAGTAAACA 58.555 39.130 18.07 0.00 35.06 2.83
772 2846 6.716898 ATACGAAGCTTTGGTGTAGTAAAC 57.283 37.500 18.07 0.00 0.00 2.01
773 2847 7.441760 TGAAATACGAAGCTTTGGTGTAGTAAA 59.558 33.333 18.07 0.97 0.00 2.01
774 2848 6.930164 TGAAATACGAAGCTTTGGTGTAGTAA 59.070 34.615 18.07 0.00 0.00 2.24
775 2849 6.457355 TGAAATACGAAGCTTTGGTGTAGTA 58.543 36.000 18.07 6.58 0.00 1.82
776 2850 5.302360 TGAAATACGAAGCTTTGGTGTAGT 58.698 37.500 18.07 7.31 0.00 2.73
777 2851 5.856126 TGAAATACGAAGCTTTGGTGTAG 57.144 39.130 18.07 0.00 0.00 2.74
778 2852 6.621316 TTTGAAATACGAAGCTTTGGTGTA 57.379 33.333 18.07 10.65 0.00 2.90
779 2853 5.508200 TTTGAAATACGAAGCTTTGGTGT 57.492 34.783 18.07 6.82 0.00 4.16
780 2854 6.820470 TTTTTGAAATACGAAGCTTTGGTG 57.180 33.333 18.07 3.28 0.00 4.17
846 2920 3.286404 TCCATGAGTTGGGCAATGG 57.714 52.632 0.00 0.00 46.45 3.16
905 2980 9.481340 CGGCTACGTTGTATAGTATATATAGGA 57.519 37.037 0.00 0.00 34.81 2.94
915 2990 1.473677 TGTGCGGCTACGTTGTATAGT 59.526 47.619 0.00 0.00 43.45 2.12
916 2991 1.850441 GTGTGCGGCTACGTTGTATAG 59.150 52.381 0.00 0.00 43.45 1.31
917 2992 1.201880 TGTGTGCGGCTACGTTGTATA 59.798 47.619 0.00 0.00 43.45 1.47
918 2993 0.038067 TGTGTGCGGCTACGTTGTAT 60.038 50.000 0.00 0.00 43.45 2.29
919 2994 0.249363 TTGTGTGCGGCTACGTTGTA 60.249 50.000 0.00 0.00 43.45 2.41
920 2995 1.521906 TTGTGTGCGGCTACGTTGT 60.522 52.632 0.00 0.00 43.45 3.32
977 3052 3.793144 GCGCTGTTGGCTTCTCCG 61.793 66.667 0.00 0.00 39.13 4.63
1053 3128 2.345760 GGCGTCCCCGAGACACTTA 61.346 63.158 6.41 0.00 46.69 2.24
1125 3200 2.340809 CCCGCGTACAACCAGTGA 59.659 61.111 4.92 0.00 0.00 3.41
1268 3343 3.932580 CTGTACTTGCGCGGCTCCA 62.933 63.158 8.83 0.00 0.00 3.86
1269 3344 3.188786 CTGTACTTGCGCGGCTCC 61.189 66.667 8.83 0.00 0.00 4.70
1362 3437 1.214062 CTTCCTCGCGCAGAACTCT 59.786 57.895 8.75 0.00 0.00 3.24
1527 3602 1.115930 ACTCGACCACCTTCTGCAGT 61.116 55.000 14.67 0.00 0.00 4.40
1673 3748 7.543359 ACTAGGAGTAGTGATCTATAGTCGT 57.457 40.000 0.00 4.08 38.14 4.34
1735 3847 3.802948 AAATCTCGTAGGGCTAGTGTG 57.197 47.619 0.00 0.00 0.00 3.82
1736 3848 3.679083 GCAAAATCTCGTAGGGCTAGTGT 60.679 47.826 0.00 0.00 0.00 3.55
1737 3849 2.866762 GCAAAATCTCGTAGGGCTAGTG 59.133 50.000 0.00 0.00 0.00 2.74
1738 3850 2.766828 AGCAAAATCTCGTAGGGCTAGT 59.233 45.455 0.00 0.00 0.00 2.57
1739 3851 3.460857 AGCAAAATCTCGTAGGGCTAG 57.539 47.619 0.00 0.00 0.00 3.42
1779 3892 4.804868 TCACACGTATAAGGCCTAAACA 57.195 40.909 5.16 0.00 0.00 2.83
1813 3926 3.181564 CGCGTTCGAAAAATCACACAATG 60.182 43.478 0.00 0.00 38.10 2.82
1837 3950 4.596801 TTGTTGAAATTGTTGCACAAGC 57.403 36.364 7.58 0.00 41.94 4.01
1853 3966 3.143728 GTGGTGTAGGGTAGGTTTGTTG 58.856 50.000 0.00 0.00 0.00 3.33
1907 4020 7.479980 TCAATTGCTCCGGTCTAAATATTTTG 58.520 34.615 5.91 4.59 0.00 2.44
1933 4046 1.473258 TCTGCTGGTGTGCTTTTTGT 58.527 45.000 0.00 0.00 0.00 2.83
1940 4054 1.131883 CAAGCTTATCTGCTGGTGTGC 59.868 52.381 0.00 0.00 43.24 4.57
2010 4124 4.897509 TGTTGGTCTCTGATGATGAACT 57.102 40.909 0.00 0.00 0.00 3.01
2017 4131 4.576053 TGAACTGTTTGTTGGTCTCTGATG 59.424 41.667 0.00 0.00 39.30 3.07
2018 4132 4.576463 GTGAACTGTTTGTTGGTCTCTGAT 59.424 41.667 0.00 0.00 39.30 2.90
2019 4133 3.938963 GTGAACTGTTTGTTGGTCTCTGA 59.061 43.478 0.00 0.00 39.30 3.27
2020 4134 3.065371 GGTGAACTGTTTGTTGGTCTCTG 59.935 47.826 0.00 0.00 39.30 3.35
2021 4135 3.279434 GGTGAACTGTTTGTTGGTCTCT 58.721 45.455 0.00 0.00 39.30 3.10
2022 4136 2.031683 CGGTGAACTGTTTGTTGGTCTC 59.968 50.000 0.00 0.00 39.30 3.36
2023 4137 2.014128 CGGTGAACTGTTTGTTGGTCT 58.986 47.619 0.00 0.00 39.30 3.85
2024 4138 2.011222 TCGGTGAACTGTTTGTTGGTC 58.989 47.619 0.00 0.00 39.30 4.02
2025 4139 2.116827 TCGGTGAACTGTTTGTTGGT 57.883 45.000 0.00 0.00 39.30 3.67
2026 4140 3.175929 GTTTCGGTGAACTGTTTGTTGG 58.824 45.455 0.00 0.00 39.30 3.77
2027 4141 2.843643 CGTTTCGGTGAACTGTTTGTTG 59.156 45.455 0.00 0.00 39.30 3.33
2028 4142 2.729778 GCGTTTCGGTGAACTGTTTGTT 60.730 45.455 0.00 0.00 42.38 2.83
2029 4143 1.202098 GCGTTTCGGTGAACTGTTTGT 60.202 47.619 0.00 0.00 0.00 2.83
2030 4144 1.462791 GCGTTTCGGTGAACTGTTTG 58.537 50.000 0.00 0.00 0.00 2.93
2031 4145 0.027063 CGCGTTTCGGTGAACTGTTT 59.973 50.000 0.00 0.00 33.78 2.83
2032 4146 0.806884 TCGCGTTTCGGTGAACTGTT 60.807 50.000 5.77 0.00 39.05 3.16
2033 4147 0.806884 TTCGCGTTTCGGTGAACTGT 60.807 50.000 5.77 0.00 39.05 3.55
2034 4148 0.302288 TTTCGCGTTTCGGTGAACTG 59.698 50.000 5.77 0.00 36.26 3.16
2035 4149 1.223187 ATTTCGCGTTTCGGTGAACT 58.777 45.000 5.77 0.00 36.26 3.01
2036 4150 1.706597 CAATTTCGCGTTTCGGTGAAC 59.293 47.619 5.77 0.00 36.26 3.18
2037 4151 1.334239 CCAATTTCGCGTTTCGGTGAA 60.334 47.619 5.77 0.00 39.05 3.18
2038 4152 0.236187 CCAATTTCGCGTTTCGGTGA 59.764 50.000 5.77 0.00 39.05 4.02
2039 4153 0.236187 TCCAATTTCGCGTTTCGGTG 59.764 50.000 5.77 0.00 39.05 4.94
2040 4154 1.129811 GATCCAATTTCGCGTTTCGGT 59.870 47.619 5.77 0.00 39.05 4.69
2088 4202 6.821160 TGGAACCTTGGAAATTTTGAGTTTTC 59.179 34.615 0.00 0.00 0.00 2.29
2163 4278 5.150683 TGCTTTATCGGTGAACAATTTTCG 58.849 37.500 0.00 0.00 0.00 3.46
2273 4390 2.042433 TGTCAAGGAATAAGGGTTGGGG 59.958 50.000 0.00 0.00 0.00 4.96
2420 4537 1.164041 GGTTTGAGTCGTGGTGGTGG 61.164 60.000 0.00 0.00 0.00 4.61
2421 4538 0.462937 TGGTTTGAGTCGTGGTGGTG 60.463 55.000 0.00 0.00 0.00 4.17
2422 4539 0.179056 CTGGTTTGAGTCGTGGTGGT 60.179 55.000 0.00 0.00 0.00 4.16
2454 4571 7.589221 GGTCGAAATGTAGTAGTTTAGTATCCG 59.411 40.741 0.00 0.00 0.00 4.18
2484 4601 5.295431 TGATGGTGAAGAAATAACGCTTG 57.705 39.130 0.00 0.00 0.00 4.01
2530 4647 1.432270 GAAGGTAGCAGCACGCCATC 61.432 60.000 0.00 0.00 44.04 3.51
2534 4651 0.806492 GGTAGAAGGTAGCAGCACGC 60.806 60.000 0.00 0.00 42.91 5.34
2535 4652 0.818296 AGGTAGAAGGTAGCAGCACG 59.182 55.000 0.00 0.00 0.00 5.34
2585 4703 0.464036 GGCCACAGATCATCGTACCA 59.536 55.000 0.00 0.00 0.00 3.25
2627 4745 3.485431 CAGCGCTCGCAGAACCAG 61.485 66.667 7.13 0.00 44.88 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.