Multiple sequence alignment - TraesCS6A01G220300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G220300 chr6A 100.000 5084 0 0 1 5084 409384250 409379167 0.000000e+00 9389.0
1 TraesCS6A01G220300 chr6A 91.244 217 16 1 1616 1829 409382116 409381900 4.980000e-75 292.0
2 TraesCS6A01G220300 chr6A 91.244 217 16 1 2135 2351 409382635 409382422 4.980000e-75 292.0
3 TraesCS6A01G220300 chr6A 80.233 258 20 15 1857 2113 409382055 409381828 1.130000e-36 165.0
4 TraesCS6A01G220300 chr6A 80.233 258 20 15 2196 2423 409382394 409382138 1.130000e-36 165.0
5 TraesCS6A01G220300 chr6A 85.915 71 5 5 4559 4627 547829554 547829621 2.540000e-08 71.3
6 TraesCS6A01G220300 chr6B 91.880 4532 204 52 608 5084 471510931 471506509 0.000000e+00 6180.0
7 TraesCS6A01G220300 chr6B 93.458 214 14 0 1616 1829 471509451 471509238 8.210000e-83 318.0
8 TraesCS6A01G220300 chr6B 82.143 392 39 21 21 392 471535096 471534716 1.780000e-79 307.0
9 TraesCS6A01G220300 chr6B 88.479 217 22 1 2135 2351 471509935 471509722 5.050000e-65 259.0
10 TraesCS6A01G220300 chr6B 80.620 258 19 17 1857 2113 471509393 471509166 2.430000e-38 171.0
11 TraesCS6A01G220300 chr6B 88.889 90 10 0 1857 1946 471509877 471509788 1.500000e-20 111.0
12 TraesCS6A01G220300 chr6B 90.278 72 2 4 4559 4627 601883786 601883855 7.010000e-14 89.8
13 TraesCS6A01G220300 chr6D 95.770 3593 88 23 753 4290 305186242 305189825 0.000000e+00 5734.0
14 TraesCS6A01G220300 chr6D 88.849 843 35 19 4244 5041 305189813 305190641 0.000000e+00 981.0
15 TraesCS6A01G220300 chr6D 93.088 217 12 1 1616 1829 305187640 305187856 1.060000e-81 315.0
16 TraesCS6A01G220300 chr6D 91.705 217 17 1 2135 2351 305187119 305187334 2.980000e-77 300.0
17 TraesCS6A01G220300 chr6D 80.843 261 19 15 1854 2113 305187698 305187928 5.230000e-40 176.0
18 TraesCS6A01G220300 chr6D 79.389 262 23 15 2193 2424 305187359 305187619 6.820000e-34 156.0
19 TraesCS6A01G220300 chr6D 84.615 130 12 6 1854 1983 305187176 305187297 6.910000e-24 122.0
20 TraesCS6A01G220300 chr5D 87.500 72 3 5 4556 4622 297499913 297499843 1.520000e-10 78.7
21 TraesCS6A01G220300 chrUn 97.561 41 1 0 4559 4599 9847546 9847586 2.540000e-08 71.3
22 TraesCS6A01G220300 chr5B 86.111 72 3 5 4556 4622 337831164 337831095 2.540000e-08 71.3
23 TraesCS6A01G220300 chr3D 84.932 73 5 4 4559 4627 75358687 75358617 9.130000e-08 69.4
24 TraesCS6A01G220300 chr3A 93.023 43 3 0 4542 4584 421678137 421678095 4.250000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G220300 chr6A 409379167 409384250 5083 True 2060.6 9389 88.590800 1 5084 5 chr6A.!!$R1 5083
1 TraesCS6A01G220300 chr6B 471506509 471510931 4422 True 1407.8 6180 88.665200 608 5084 5 chr6B.!!$R2 4476
2 TraesCS6A01G220300 chr6D 305186242 305190641 4399 False 1112.0 5734 87.751286 753 5041 7 chr6D.!!$F1 4288

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
850 852 0.037160 TCGGCCCAACCCTTTTCTAC 59.963 55.000 0.0 0.0 33.26 2.59 F
1139 1141 1.004044 AGCCTCAGACACAGGAAATGG 59.996 52.381 0.0 0.0 31.91 3.16 F
1597 1622 1.725641 TTTTCGCAGATGATGACGCT 58.274 45.000 0.0 0.0 35.04 5.07 F
1936 1993 4.927267 AGATGTTACAAGGGATTGACCA 57.073 40.909 0.0 0.0 41.20 4.02 F
3630 3694 0.443869 GAATCGATGCGTGCAACAGT 59.556 50.000 0.0 0.0 35.74 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2316 2373 1.707427 AGGCTTGATCCTTCAGTTGGT 59.293 47.619 0.00 0.00 30.82 3.67 R
3133 3197 2.223340 CCGGCAAAAGATCAGTGCATAC 60.223 50.000 14.74 0.74 40.12 2.39 R
3251 3315 8.134202 TCCTGTATGTGAATGTAAGAAAGAGA 57.866 34.615 0.00 0.00 0.00 3.10 R
3891 3955 5.566429 GCAGATCATGACATTAGGAGTCGAT 60.566 44.000 0.00 0.00 38.83 3.59 R
5028 5202 1.073923 ACCAAAGAAGGTCCGCAAGAT 59.926 47.619 0.00 0.00 37.28 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.496872 AAAATACGGTGTTTAGAAAATGTTCG 57.503 30.769 3.22 0.00 38.90 3.95
35 36 6.790285 ATACGGTGTTTAGAAAATGTTCGT 57.210 33.333 0.00 0.00 38.90 3.85
36 37 4.839796 ACGGTGTTTAGAAAATGTTCGTG 58.160 39.130 0.00 0.00 38.90 4.35
37 38 4.571580 ACGGTGTTTAGAAAATGTTCGTGA 59.428 37.500 0.00 0.00 38.90 4.35
38 39 4.901881 CGGTGTTTAGAAAATGTTCGTGAC 59.098 41.667 0.00 0.00 38.90 3.67
39 40 5.502706 CGGTGTTTAGAAAATGTTCGTGACA 60.503 40.000 0.00 0.00 43.71 3.58
188 189 6.783708 ATGTGTTTTGGAAAAAGGTAGACA 57.216 33.333 0.00 0.00 0.00 3.41
189 190 6.783708 TGTGTTTTGGAAAAAGGTAGACAT 57.216 33.333 0.00 0.00 0.00 3.06
190 191 6.568869 TGTGTTTTGGAAAAAGGTAGACATG 58.431 36.000 0.00 0.00 0.00 3.21
191 192 6.153680 TGTGTTTTGGAAAAAGGTAGACATGT 59.846 34.615 0.00 0.00 0.00 3.21
192 193 7.039270 GTGTTTTGGAAAAAGGTAGACATGTT 58.961 34.615 0.00 0.00 0.00 2.71
193 194 7.010091 GTGTTTTGGAAAAAGGTAGACATGTTG 59.990 37.037 0.00 0.00 0.00 3.33
194 195 5.782893 TTGGAAAAAGGTAGACATGTTGG 57.217 39.130 0.00 0.00 0.00 3.77
195 196 4.148838 TGGAAAAAGGTAGACATGTTGGG 58.851 43.478 0.00 0.00 0.00 4.12
196 197 4.141135 TGGAAAAAGGTAGACATGTTGGGA 60.141 41.667 0.00 0.00 0.00 4.37
197 198 4.830600 GGAAAAAGGTAGACATGTTGGGAA 59.169 41.667 0.00 0.00 0.00 3.97
198 199 5.303333 GGAAAAAGGTAGACATGTTGGGAAA 59.697 40.000 0.00 0.00 0.00 3.13
199 200 6.183360 GGAAAAAGGTAGACATGTTGGGAAAA 60.183 38.462 0.00 0.00 0.00 2.29
200 201 6.800072 AAAAGGTAGACATGTTGGGAAAAA 57.200 33.333 0.00 0.00 0.00 1.94
264 265 9.929722 AAGAAAACTTGTGAAGAAAAACAAAAC 57.070 25.926 0.00 0.00 35.95 2.43
265 266 9.103861 AGAAAACTTGTGAAGAAAAACAAAACA 57.896 25.926 0.00 0.00 35.95 2.83
266 267 9.368921 GAAAACTTGTGAAGAAAAACAAAACAG 57.631 29.630 0.00 0.00 35.95 3.16
267 268 8.655651 AAACTTGTGAAGAAAAACAAAACAGA 57.344 26.923 0.00 0.00 35.95 3.41
268 269 8.655651 AACTTGTGAAGAAAAACAAAACAGAA 57.344 26.923 0.00 0.00 35.95 3.02
269 270 8.655651 ACTTGTGAAGAAAAACAAAACAGAAA 57.344 26.923 0.00 0.00 35.95 2.52
270 271 8.547894 ACTTGTGAAGAAAAACAAAACAGAAAC 58.452 29.630 0.00 0.00 35.95 2.78
271 272 7.414814 TGTGAAGAAAAACAAAACAGAAACC 57.585 32.000 0.00 0.00 0.00 3.27
272 273 7.213678 TGTGAAGAAAAACAAAACAGAAACCT 58.786 30.769 0.00 0.00 0.00 3.50
273 274 7.170658 TGTGAAGAAAAACAAAACAGAAACCTG 59.829 33.333 0.00 0.00 37.67 4.00
274 275 7.383843 GTGAAGAAAAACAAAACAGAAACCTGA 59.616 33.333 0.00 0.00 35.67 3.86
275 276 7.928706 TGAAGAAAAACAAAACAGAAACCTGAA 59.071 29.630 0.00 0.00 35.67 3.02
276 277 7.889589 AGAAAAACAAAACAGAAACCTGAAG 57.110 32.000 0.00 0.00 35.67 3.02
277 278 7.666623 AGAAAAACAAAACAGAAACCTGAAGA 58.333 30.769 0.00 0.00 35.67 2.87
278 279 8.147704 AGAAAAACAAAACAGAAACCTGAAGAA 58.852 29.630 0.00 0.00 35.67 2.52
279 280 8.669946 AAAAACAAAACAGAAACCTGAAGAAA 57.330 26.923 0.00 0.00 35.67 2.52
280 281 8.669946 AAAACAAAACAGAAACCTGAAGAAAA 57.330 26.923 0.00 0.00 35.67 2.29
281 282 8.846943 AAACAAAACAGAAACCTGAAGAAAAT 57.153 26.923 0.00 0.00 35.67 1.82
282 283 8.479313 AACAAAACAGAAACCTGAAGAAAATC 57.521 30.769 0.00 0.00 35.67 2.17
283 284 7.610865 ACAAAACAGAAACCTGAAGAAAATCA 58.389 30.769 0.00 0.00 35.67 2.57
284 285 8.093927 ACAAAACAGAAACCTGAAGAAAATCAA 58.906 29.630 0.00 0.00 35.67 2.57
285 286 8.934825 CAAAACAGAAACCTGAAGAAAATCAAA 58.065 29.630 0.00 0.00 35.67 2.69
286 287 8.707938 AAACAGAAACCTGAAGAAAATCAAAG 57.292 30.769 0.00 0.00 35.67 2.77
287 288 6.809869 ACAGAAACCTGAAGAAAATCAAAGG 58.190 36.000 0.00 0.00 35.67 3.11
288 289 6.607198 ACAGAAACCTGAAGAAAATCAAAGGA 59.393 34.615 0.00 0.00 35.67 3.36
289 290 7.124147 ACAGAAACCTGAAGAAAATCAAAGGAA 59.876 33.333 0.00 0.00 35.67 3.36
290 291 7.436376 CAGAAACCTGAAGAAAATCAAAGGAAC 59.564 37.037 0.00 0.00 33.56 3.62
292 293 6.396829 ACCTGAAGAAAATCAAAGGAACTG 57.603 37.500 0.00 0.00 40.86 3.16
293 294 5.302823 ACCTGAAGAAAATCAAAGGAACTGG 59.697 40.000 0.00 0.00 40.86 4.00
294 295 5.302823 CCTGAAGAAAATCAAAGGAACTGGT 59.697 40.000 0.00 0.00 40.86 4.00
295 296 6.147864 TGAAGAAAATCAAAGGAACTGGTG 57.852 37.500 0.00 0.00 40.86 4.17
296 297 5.068987 TGAAGAAAATCAAAGGAACTGGTGG 59.931 40.000 0.00 0.00 40.86 4.61
297 298 4.546674 AGAAAATCAAAGGAACTGGTGGT 58.453 39.130 0.00 0.00 40.86 4.16
298 299 4.342092 AGAAAATCAAAGGAACTGGTGGTG 59.658 41.667 0.00 0.00 40.86 4.17
299 300 3.593442 AATCAAAGGAACTGGTGGTGA 57.407 42.857 0.00 0.00 40.86 4.02
300 301 3.593442 ATCAAAGGAACTGGTGGTGAA 57.407 42.857 0.00 0.00 40.86 3.18
301 302 3.374042 TCAAAGGAACTGGTGGTGAAA 57.626 42.857 0.00 0.00 40.86 2.69
302 303 3.020984 TCAAAGGAACTGGTGGTGAAAC 58.979 45.455 0.00 0.00 40.86 2.78
303 304 2.757868 CAAAGGAACTGGTGGTGAAACA 59.242 45.455 0.00 0.00 40.86 2.83
304 305 2.052782 AGGAACTGGTGGTGAAACAC 57.947 50.000 0.00 0.00 35.65 3.32
305 306 1.283613 AGGAACTGGTGGTGAAACACA 59.716 47.619 0.19 0.00 43.08 3.72
306 307 2.096248 GGAACTGGTGGTGAAACACAA 58.904 47.619 0.19 0.00 43.08 3.33
307 308 2.494073 GGAACTGGTGGTGAAACACAAA 59.506 45.455 0.19 0.00 43.08 2.83
308 309 3.056465 GGAACTGGTGGTGAAACACAAAA 60.056 43.478 0.19 0.00 43.08 2.44
309 310 4.561105 GAACTGGTGGTGAAACACAAAAA 58.439 39.130 0.19 0.00 43.08 1.94
310 311 4.817318 ACTGGTGGTGAAACACAAAAAT 57.183 36.364 0.19 0.00 43.08 1.82
311 312 4.502962 ACTGGTGGTGAAACACAAAAATG 58.497 39.130 0.19 0.00 43.08 2.32
312 313 3.866651 TGGTGGTGAAACACAAAAATGG 58.133 40.909 0.19 0.00 43.08 3.16
313 314 3.515502 TGGTGGTGAAACACAAAAATGGA 59.484 39.130 0.19 0.00 43.08 3.41
314 315 4.020218 TGGTGGTGAAACACAAAAATGGAA 60.020 37.500 0.19 0.00 43.08 3.53
315 316 4.938226 GGTGGTGAAACACAAAAATGGAAA 59.062 37.500 0.19 0.00 43.08 3.13
316 317 5.412904 GGTGGTGAAACACAAAAATGGAAAA 59.587 36.000 0.19 0.00 43.08 2.29
317 318 6.403092 GGTGGTGAAACACAAAAATGGAAAAG 60.403 38.462 0.19 0.00 43.08 2.27
318 319 5.123027 TGGTGAAACACAAAAATGGAAAAGC 59.877 36.000 0.00 0.00 39.98 3.51
319 320 5.123027 GGTGAAACACAAAAATGGAAAAGCA 59.877 36.000 0.00 0.00 39.98 3.91
320 321 6.348868 GGTGAAACACAAAAATGGAAAAGCAA 60.349 34.615 0.00 0.00 39.98 3.91
321 322 6.742264 GTGAAACACAAAAATGGAAAAGCAAG 59.258 34.615 0.00 0.00 36.32 4.01
322 323 5.816449 AACACAAAAATGGAAAAGCAAGG 57.184 34.783 0.00 0.00 0.00 3.61
323 324 5.096443 ACACAAAAATGGAAAAGCAAGGA 57.904 34.783 0.00 0.00 0.00 3.36
324 325 5.495640 ACACAAAAATGGAAAAGCAAGGAA 58.504 33.333 0.00 0.00 0.00 3.36
325 326 5.942826 ACACAAAAATGGAAAAGCAAGGAAA 59.057 32.000 0.00 0.00 0.00 3.13
326 327 6.432472 ACACAAAAATGGAAAAGCAAGGAAAA 59.568 30.769 0.00 0.00 0.00 2.29
327 328 6.746822 CACAAAAATGGAAAAGCAAGGAAAAC 59.253 34.615 0.00 0.00 0.00 2.43
328 329 6.127758 ACAAAAATGGAAAAGCAAGGAAAACC 60.128 34.615 0.00 0.00 0.00 3.27
329 330 5.372343 AAATGGAAAAGCAAGGAAAACCT 57.628 34.783 0.00 0.00 0.00 3.50
330 331 5.372343 AATGGAAAAGCAAGGAAAACCTT 57.628 34.783 0.00 0.00 0.00 3.50
331 332 6.493189 AATGGAAAAGCAAGGAAAACCTTA 57.507 33.333 0.00 0.00 0.00 2.69
332 333 5.529581 TGGAAAAGCAAGGAAAACCTTAG 57.470 39.130 0.00 0.00 0.00 2.18
333 334 4.343814 TGGAAAAGCAAGGAAAACCTTAGG 59.656 41.667 0.00 0.00 0.00 2.69
334 335 4.587262 GGAAAAGCAAGGAAAACCTTAGGA 59.413 41.667 4.77 0.00 0.00 2.94
335 336 5.069914 GGAAAAGCAAGGAAAACCTTAGGAA 59.930 40.000 4.77 0.00 0.00 3.36
336 337 6.239600 GGAAAAGCAAGGAAAACCTTAGGAAT 60.240 38.462 4.77 0.00 0.00 3.01
337 338 5.984695 AAGCAAGGAAAACCTTAGGAATC 57.015 39.130 4.77 0.00 0.00 2.52
338 339 5.262455 AGCAAGGAAAACCTTAGGAATCT 57.738 39.130 4.77 0.00 0.00 2.40
339 340 6.388619 AGCAAGGAAAACCTTAGGAATCTA 57.611 37.500 4.77 0.00 0.00 1.98
340 341 6.418946 AGCAAGGAAAACCTTAGGAATCTAG 58.581 40.000 4.77 0.00 0.00 2.43
341 342 6.012421 AGCAAGGAAAACCTTAGGAATCTAGT 60.012 38.462 4.77 0.00 0.00 2.57
342 343 6.094186 GCAAGGAAAACCTTAGGAATCTAGTG 59.906 42.308 4.77 0.00 0.00 2.74
343 344 7.394816 CAAGGAAAACCTTAGGAATCTAGTGA 58.605 38.462 4.77 0.00 0.00 3.41
344 345 7.569599 AGGAAAACCTTAGGAATCTAGTGAA 57.430 36.000 4.77 0.00 0.00 3.18
345 346 7.625469 AGGAAAACCTTAGGAATCTAGTGAAG 58.375 38.462 4.77 0.00 0.00 3.02
346 347 7.458170 AGGAAAACCTTAGGAATCTAGTGAAGA 59.542 37.037 4.77 0.00 39.02 2.87
347 348 8.101419 GGAAAACCTTAGGAATCTAGTGAAGAA 58.899 37.037 4.77 0.00 37.89 2.52
348 349 9.503399 GAAAACCTTAGGAATCTAGTGAAGAAA 57.497 33.333 4.77 0.00 37.89 2.52
349 350 8.850007 AAACCTTAGGAATCTAGTGAAGAAAC 57.150 34.615 4.77 0.00 37.89 2.78
350 351 6.631962 ACCTTAGGAATCTAGTGAAGAAACG 58.368 40.000 4.77 0.00 37.89 3.60
351 352 5.520649 CCTTAGGAATCTAGTGAAGAAACGC 59.479 44.000 0.00 0.00 37.89 4.84
352 353 4.537135 AGGAATCTAGTGAAGAAACGCA 57.463 40.909 0.00 0.00 37.89 5.24
353 354 4.499183 AGGAATCTAGTGAAGAAACGCAG 58.501 43.478 0.00 0.00 37.89 5.18
354 355 4.220821 AGGAATCTAGTGAAGAAACGCAGA 59.779 41.667 0.00 0.00 37.89 4.26
355 356 4.929808 GGAATCTAGTGAAGAAACGCAGAA 59.070 41.667 0.00 0.00 37.89 3.02
356 357 5.408604 GGAATCTAGTGAAGAAACGCAGAAA 59.591 40.000 0.00 0.00 37.89 2.52
357 358 6.073222 GGAATCTAGTGAAGAAACGCAGAAAA 60.073 38.462 0.00 0.00 37.89 2.29
358 359 5.652744 TCTAGTGAAGAAACGCAGAAAAC 57.347 39.130 0.00 0.00 0.00 2.43
359 360 5.113383 TCTAGTGAAGAAACGCAGAAAACA 58.887 37.500 0.00 0.00 0.00 2.83
360 361 4.278678 AGTGAAGAAACGCAGAAAACAG 57.721 40.909 0.00 0.00 0.00 3.16
361 362 3.938963 AGTGAAGAAACGCAGAAAACAGA 59.061 39.130 0.00 0.00 0.00 3.41
362 363 4.029043 GTGAAGAAACGCAGAAAACAGAC 58.971 43.478 0.00 0.00 0.00 3.51
363 364 3.064820 TGAAGAAACGCAGAAAACAGACC 59.935 43.478 0.00 0.00 0.00 3.85
364 365 2.639065 AGAAACGCAGAAAACAGACCA 58.361 42.857 0.00 0.00 0.00 4.02
365 366 3.013921 AGAAACGCAGAAAACAGACCAA 58.986 40.909 0.00 0.00 0.00 3.67
366 367 3.442273 AGAAACGCAGAAAACAGACCAAA 59.558 39.130 0.00 0.00 0.00 3.28
367 368 3.859411 AACGCAGAAAACAGACCAAAA 57.141 38.095 0.00 0.00 0.00 2.44
368 369 4.385358 AACGCAGAAAACAGACCAAAAT 57.615 36.364 0.00 0.00 0.00 1.82
369 370 4.385358 ACGCAGAAAACAGACCAAAATT 57.615 36.364 0.00 0.00 0.00 1.82
370 371 4.111916 ACGCAGAAAACAGACCAAAATTG 58.888 39.130 0.00 0.00 0.00 2.32
371 372 4.142271 ACGCAGAAAACAGACCAAAATTGA 60.142 37.500 0.00 0.00 0.00 2.57
372 373 4.803088 CGCAGAAAACAGACCAAAATTGAA 59.197 37.500 0.00 0.00 0.00 2.69
373 374 5.290643 CGCAGAAAACAGACCAAAATTGAAA 59.709 36.000 0.00 0.00 0.00 2.69
374 375 6.183360 CGCAGAAAACAGACCAAAATTGAAAA 60.183 34.615 0.00 0.00 0.00 2.29
375 376 7.525759 GCAGAAAACAGACCAAAATTGAAAAA 58.474 30.769 0.00 0.00 0.00 1.94
413 414 8.956426 TGAATAGAAAATGAAAGGTGTACATCC 58.044 33.333 1.47 4.47 0.00 3.51
414 415 8.877864 AATAGAAAATGAAAGGTGTACATCCA 57.122 30.769 1.47 0.00 0.00 3.41
415 416 9.479549 AATAGAAAATGAAAGGTGTACATCCAT 57.520 29.630 1.47 0.00 0.00 3.41
416 417 7.781324 AGAAAATGAAAGGTGTACATCCATT 57.219 32.000 1.47 2.98 0.00 3.16
417 418 8.877864 AGAAAATGAAAGGTGTACATCCATTA 57.122 30.769 1.47 0.00 0.00 1.90
418 419 8.739972 AGAAAATGAAAGGTGTACATCCATTAC 58.260 33.333 1.47 4.59 0.00 1.89
419 420 8.415950 AAAATGAAAGGTGTACATCCATTACA 57.584 30.769 1.47 5.24 0.00 2.41
420 421 8.415950 AAATGAAAGGTGTACATCCATTACAA 57.584 30.769 1.47 0.00 31.27 2.41
421 422 7.630242 ATGAAAGGTGTACATCCATTACAAG 57.370 36.000 1.47 0.00 31.27 3.16
422 423 6.539173 TGAAAGGTGTACATCCATTACAAGT 58.461 36.000 1.47 0.00 31.27 3.16
423 424 6.653320 TGAAAGGTGTACATCCATTACAAGTC 59.347 38.462 1.47 0.00 31.27 3.01
424 425 5.099042 AGGTGTACATCCATTACAAGTCC 57.901 43.478 1.47 0.00 31.27 3.85
425 426 4.534500 AGGTGTACATCCATTACAAGTCCA 59.466 41.667 1.47 0.00 31.27 4.02
426 427 5.191722 AGGTGTACATCCATTACAAGTCCAT 59.808 40.000 1.47 0.00 31.27 3.41
427 428 5.885912 GGTGTACATCCATTACAAGTCCATT 59.114 40.000 0.00 0.00 31.27 3.16
428 429 6.183360 GGTGTACATCCATTACAAGTCCATTG 60.183 42.308 0.00 0.00 45.01 2.82
429 430 5.885352 TGTACATCCATTACAAGTCCATTGG 59.115 40.000 0.00 0.00 43.68 3.16
430 431 3.701040 ACATCCATTACAAGTCCATTGGC 59.299 43.478 0.00 0.00 43.68 4.52
431 432 3.737559 TCCATTACAAGTCCATTGGCT 57.262 42.857 0.00 0.00 43.68 4.75
432 433 4.853468 TCCATTACAAGTCCATTGGCTA 57.147 40.909 0.00 0.00 43.68 3.93
433 434 4.523083 TCCATTACAAGTCCATTGGCTAC 58.477 43.478 0.00 0.00 43.68 3.58
434 435 3.312421 CCATTACAAGTCCATTGGCTACG 59.688 47.826 0.00 0.00 43.68 3.51
435 436 2.018542 TACAAGTCCATTGGCTACGC 57.981 50.000 0.00 0.00 43.68 4.42
436 437 1.019278 ACAAGTCCATTGGCTACGCG 61.019 55.000 3.53 3.53 43.68 6.01
437 438 2.106683 AAGTCCATTGGCTACGCGC 61.107 57.895 5.73 0.00 38.13 6.86
438 439 2.511600 GTCCATTGGCTACGCGCT 60.512 61.111 5.73 0.00 39.13 5.92
439 440 2.511373 TCCATTGGCTACGCGCTG 60.511 61.111 5.73 0.00 39.13 5.18
440 441 2.819595 CCATTGGCTACGCGCTGT 60.820 61.111 5.73 8.05 39.13 4.40
441 442 2.398554 CCATTGGCTACGCGCTGTT 61.399 57.895 5.73 0.00 39.13 3.16
442 443 1.060937 CATTGGCTACGCGCTGTTC 59.939 57.895 5.73 1.26 39.13 3.18
443 444 2.452813 ATTGGCTACGCGCTGTTCG 61.453 57.895 5.73 1.82 39.13 3.95
444 445 3.851845 TTGGCTACGCGCTGTTCGT 62.852 57.895 5.73 0.00 43.20 3.85
451 452 2.551270 GCGCTGTTCGTGAACCAG 59.449 61.111 10.05 8.51 40.46 4.00
452 453 1.954146 GCGCTGTTCGTGAACCAGA 60.954 57.895 10.05 0.00 40.46 3.86
453 454 1.891060 GCGCTGTTCGTGAACCAGAG 61.891 60.000 10.05 9.81 40.46 3.35
454 455 0.597637 CGCTGTTCGTGAACCAGAGT 60.598 55.000 10.05 0.00 40.46 3.24
455 456 1.583054 GCTGTTCGTGAACCAGAGTT 58.417 50.000 10.05 0.00 40.46 3.01
456 457 2.750948 GCTGTTCGTGAACCAGAGTTA 58.249 47.619 10.05 0.00 40.46 2.24
457 458 2.731976 GCTGTTCGTGAACCAGAGTTAG 59.268 50.000 10.05 0.84 40.46 2.34
458 459 3.552273 GCTGTTCGTGAACCAGAGTTAGA 60.552 47.826 10.05 0.00 40.46 2.10
459 460 4.810790 CTGTTCGTGAACCAGAGTTAGAT 58.189 43.478 10.05 0.00 40.46 1.98
460 461 5.621555 GCTGTTCGTGAACCAGAGTTAGATA 60.622 44.000 10.05 0.00 40.46 1.98
461 462 6.335471 TGTTCGTGAACCAGAGTTAGATAA 57.665 37.500 10.05 0.00 40.46 1.75
462 463 6.751157 TGTTCGTGAACCAGAGTTAGATAAA 58.249 36.000 10.05 0.00 40.46 1.40
463 464 7.211573 TGTTCGTGAACCAGAGTTAGATAAAA 58.788 34.615 10.05 0.00 40.46 1.52
464 465 7.711772 TGTTCGTGAACCAGAGTTAGATAAAAA 59.288 33.333 10.05 0.00 40.46 1.94
486 487 3.669251 AAGGCGAGATATAGTTCTGGC 57.331 47.619 2.62 2.62 44.09 4.85
487 488 1.542030 AGGCGAGATATAGTTCTGGCG 59.458 52.381 4.80 0.00 45.29 5.69
488 489 1.341606 GCGAGATATAGTTCTGGCGC 58.658 55.000 0.00 0.00 37.65 6.53
489 490 1.068194 GCGAGATATAGTTCTGGCGCT 60.068 52.381 7.64 0.00 37.65 5.92
490 491 2.857618 CGAGATATAGTTCTGGCGCTC 58.142 52.381 7.64 0.00 0.00 5.03
491 492 2.226674 CGAGATATAGTTCTGGCGCTCA 59.773 50.000 7.64 2.39 0.00 4.26
492 493 3.119673 CGAGATATAGTTCTGGCGCTCAT 60.120 47.826 7.64 0.00 0.00 2.90
493 494 4.617067 CGAGATATAGTTCTGGCGCTCATT 60.617 45.833 7.64 0.00 0.00 2.57
494 495 5.220710 AGATATAGTTCTGGCGCTCATTT 57.779 39.130 7.64 0.00 0.00 2.32
495 496 4.993584 AGATATAGTTCTGGCGCTCATTTG 59.006 41.667 7.64 0.00 0.00 2.32
496 497 2.760634 TAGTTCTGGCGCTCATTTGA 57.239 45.000 7.64 0.00 0.00 2.69
497 498 1.160137 AGTTCTGGCGCTCATTTGAC 58.840 50.000 7.64 0.00 0.00 3.18
498 499 0.169009 GTTCTGGCGCTCATTTGACC 59.831 55.000 7.64 0.00 0.00 4.02
499 500 1.298157 TTCTGGCGCTCATTTGACCG 61.298 55.000 7.64 0.00 0.00 4.79
500 501 1.741401 CTGGCGCTCATTTGACCGA 60.741 57.895 7.64 0.00 0.00 4.69
501 502 1.298157 CTGGCGCTCATTTGACCGAA 61.298 55.000 7.64 0.00 0.00 4.30
502 503 0.886938 TGGCGCTCATTTGACCGAAA 60.887 50.000 7.64 0.00 0.00 3.46
503 504 0.454452 GGCGCTCATTTGACCGAAAC 60.454 55.000 7.64 0.00 0.00 2.78
504 505 0.454452 GCGCTCATTTGACCGAAACC 60.454 55.000 0.00 0.00 0.00 3.27
505 506 0.871722 CGCTCATTTGACCGAAACCA 59.128 50.000 0.00 0.00 0.00 3.67
506 507 1.399727 CGCTCATTTGACCGAAACCAC 60.400 52.381 0.00 0.00 0.00 4.16
507 508 1.880027 GCTCATTTGACCGAAACCACT 59.120 47.619 0.00 0.00 0.00 4.00
508 509 3.071479 GCTCATTTGACCGAAACCACTA 58.929 45.455 0.00 0.00 0.00 2.74
509 510 3.500680 GCTCATTTGACCGAAACCACTAA 59.499 43.478 0.00 0.00 0.00 2.24
510 511 4.156008 GCTCATTTGACCGAAACCACTAAT 59.844 41.667 0.00 0.00 0.00 1.73
511 512 5.335661 GCTCATTTGACCGAAACCACTAATT 60.336 40.000 0.00 0.00 0.00 1.40
512 513 6.128117 GCTCATTTGACCGAAACCACTAATTA 60.128 38.462 0.00 0.00 0.00 1.40
513 514 7.574217 GCTCATTTGACCGAAACCACTAATTAA 60.574 37.037 0.00 0.00 0.00 1.40
514 515 8.167605 TCATTTGACCGAAACCACTAATTAAA 57.832 30.769 0.00 0.00 0.00 1.52
515 516 8.630917 TCATTTGACCGAAACCACTAATTAAAA 58.369 29.630 0.00 0.00 0.00 1.52
516 517 9.250624 CATTTGACCGAAACCACTAATTAAAAA 57.749 29.630 0.00 0.00 0.00 1.94
543 544 7.823745 ACTCTTTACAAATGTCATTTCCACT 57.176 32.000 7.87 0.00 0.00 4.00
544 545 8.237811 ACTCTTTACAAATGTCATTTCCACTT 57.762 30.769 7.87 0.00 0.00 3.16
545 546 8.695456 ACTCTTTACAAATGTCATTTCCACTTT 58.305 29.630 7.87 0.00 0.00 2.66
546 547 9.185192 CTCTTTACAAATGTCATTTCCACTTTC 57.815 33.333 7.87 0.00 0.00 2.62
547 548 8.912988 TCTTTACAAATGTCATTTCCACTTTCT 58.087 29.630 7.87 0.00 0.00 2.52
548 549 9.185192 CTTTACAAATGTCATTTCCACTTTCTC 57.815 33.333 7.87 0.00 0.00 2.87
549 550 6.713762 ACAAATGTCATTTCCACTTTCTCA 57.286 33.333 7.87 0.00 0.00 3.27
550 551 7.294017 ACAAATGTCATTTCCACTTTCTCAT 57.706 32.000 7.87 0.00 0.00 2.90
551 552 8.408043 ACAAATGTCATTTCCACTTTCTCATA 57.592 30.769 7.87 0.00 0.00 2.15
552 553 9.028284 ACAAATGTCATTTCCACTTTCTCATAT 57.972 29.630 7.87 0.00 0.00 1.78
553 554 9.865321 CAAATGTCATTTCCACTTTCTCATATT 57.135 29.630 7.87 0.00 0.00 1.28
556 557 8.196802 TGTCATTTCCACTTTCTCATATTACG 57.803 34.615 0.00 0.00 0.00 3.18
557 558 8.038351 TGTCATTTCCACTTTCTCATATTACGA 58.962 33.333 0.00 0.00 0.00 3.43
558 559 8.879759 GTCATTTCCACTTTCTCATATTACGAA 58.120 33.333 0.00 0.00 0.00 3.85
559 560 9.443323 TCATTTCCACTTTCTCATATTACGAAA 57.557 29.630 0.00 0.00 0.00 3.46
564 565 9.443323 TCCACTTTCTCATATTACGAAAAATGA 57.557 29.630 0.00 0.00 0.00 2.57
565 566 9.490663 CCACTTTCTCATATTACGAAAAATGAC 57.509 33.333 0.00 0.00 0.00 3.06
566 567 9.199184 CACTTTCTCATATTACGAAAAATGACG 57.801 33.333 0.00 0.00 0.00 4.35
567 568 7.903431 ACTTTCTCATATTACGAAAAATGACGC 59.097 33.333 0.00 0.00 0.00 5.19
568 569 6.895607 TCTCATATTACGAAAAATGACGCA 57.104 33.333 0.00 0.00 0.00 5.24
569 570 7.477144 TCTCATATTACGAAAAATGACGCAT 57.523 32.000 0.00 0.00 0.00 4.73
570 571 7.915508 TCTCATATTACGAAAAATGACGCATT 58.084 30.769 0.00 0.09 35.39 3.56
571 572 7.850492 TCTCATATTACGAAAAATGACGCATTG 59.150 33.333 5.95 0.00 34.04 2.82
572 573 6.413526 TCATATTACGAAAAATGACGCATTGC 59.586 34.615 0.00 0.00 34.04 3.56
573 574 2.414058 ACGAAAAATGACGCATTGCA 57.586 40.000 9.69 0.00 34.04 4.08
574 575 2.945278 ACGAAAAATGACGCATTGCAT 58.055 38.095 9.69 0.00 34.04 3.96
575 576 2.662637 ACGAAAAATGACGCATTGCATG 59.337 40.909 9.69 0.00 34.04 4.06
584 585 2.481919 CATTGCATGCGCGTCACT 59.518 55.556 14.09 0.00 42.97 3.41
585 586 1.154169 CATTGCATGCGCGTCACTT 60.154 52.632 14.09 0.00 42.97 3.16
586 587 1.154169 ATTGCATGCGCGTCACTTG 60.154 52.632 14.09 3.97 42.97 3.16
587 588 1.855213 ATTGCATGCGCGTCACTTGT 61.855 50.000 14.09 0.00 42.97 3.16
588 589 2.202222 GCATGCGCGTCACTTGTC 60.202 61.111 8.43 0.00 0.00 3.18
589 590 2.953605 GCATGCGCGTCACTTGTCA 61.954 57.895 8.43 0.00 0.00 3.58
590 591 1.154599 CATGCGCGTCACTTGTCAC 60.155 57.895 8.43 0.00 0.00 3.67
591 592 1.594021 ATGCGCGTCACTTGTCACA 60.594 52.632 8.43 0.00 0.00 3.58
592 593 1.157257 ATGCGCGTCACTTGTCACAA 61.157 50.000 8.43 0.00 0.00 3.33
593 594 1.367665 GCGCGTCACTTGTCACAAC 60.368 57.895 8.43 0.00 0.00 3.32
594 595 2.002899 CGCGTCACTTGTCACAACA 58.997 52.632 0.00 0.00 0.00 3.33
595 596 0.581529 CGCGTCACTTGTCACAACAT 59.418 50.000 0.00 0.00 34.73 2.71
596 597 1.657260 CGCGTCACTTGTCACAACATG 60.657 52.381 0.00 0.00 34.73 3.21
597 598 1.330521 GCGTCACTTGTCACAACATGT 59.669 47.619 0.00 0.00 42.66 3.21
598 599 2.542178 GCGTCACTTGTCACAACATGTA 59.458 45.455 0.00 0.00 40.65 2.29
599 600 3.001838 GCGTCACTTGTCACAACATGTAA 59.998 43.478 0.00 0.00 40.65 2.41
600 601 4.495019 GCGTCACTTGTCACAACATGTAAA 60.495 41.667 0.00 0.00 40.65 2.01
601 602 5.564768 CGTCACTTGTCACAACATGTAAAA 58.435 37.500 0.00 0.00 40.65 1.52
602 603 5.451023 CGTCACTTGTCACAACATGTAAAAC 59.549 40.000 0.00 0.00 40.65 2.43
603 604 5.741982 GTCACTTGTCACAACATGTAAAACC 59.258 40.000 0.00 0.00 40.65 3.27
604 605 5.650266 TCACTTGTCACAACATGTAAAACCT 59.350 36.000 0.00 0.00 40.65 3.50
605 606 6.824196 TCACTTGTCACAACATGTAAAACCTA 59.176 34.615 0.00 0.00 40.65 3.08
606 607 6.910433 CACTTGTCACAACATGTAAAACCTAC 59.090 38.462 0.00 0.00 40.65 3.18
618 619 0.601841 AAACCTACCGCCAAGTGACG 60.602 55.000 0.00 0.00 0.00 4.35
619 620 1.751349 AACCTACCGCCAAGTGACGT 61.751 55.000 0.00 0.00 0.00 4.34
622 623 3.869473 TACCGCCAAGTGACGTGCC 62.869 63.158 0.00 0.00 0.00 5.01
625 626 4.947147 GCCAAGTGACGTGCCCCA 62.947 66.667 0.00 0.00 0.00 4.96
628 629 1.178534 CCAAGTGACGTGCCCCAAAT 61.179 55.000 0.00 0.00 0.00 2.32
629 630 0.240945 CAAGTGACGTGCCCCAAATC 59.759 55.000 0.00 0.00 0.00 2.17
633 634 0.621082 TGACGTGCCCCAAATCCATA 59.379 50.000 0.00 0.00 0.00 2.74
663 664 0.670546 CTTGCGAAGGCTTTCCGAGA 60.671 55.000 11.96 0.00 40.82 4.04
671 672 3.596310 AGGCTTTCCGAGAAGTACTTC 57.404 47.619 25.24 25.24 37.36 3.01
717 719 2.749621 GGGCATGAAATAGGATTAGCCG 59.250 50.000 0.00 0.00 43.43 5.52
719 721 3.437049 GGCATGAAATAGGATTAGCCGTC 59.563 47.826 0.00 0.00 43.43 4.79
722 724 2.067013 GAAATAGGATTAGCCGTCGCC 58.933 52.381 0.00 0.00 43.43 5.54
726 728 1.448893 GGATTAGCCGTCGCCACAA 60.449 57.895 0.00 0.00 34.57 3.33
732 734 0.604243 AGCCGTCGCCACAACAATTA 60.604 50.000 0.00 0.00 34.57 1.40
733 735 0.450184 GCCGTCGCCACAACAATTAT 59.550 50.000 0.00 0.00 0.00 1.28
734 736 1.793714 GCCGTCGCCACAACAATTATG 60.794 52.381 0.00 0.00 0.00 1.90
735 737 1.466950 CCGTCGCCACAACAATTATGT 59.533 47.619 0.00 0.00 43.14 2.29
752 754 4.367023 TCGCGGGAGTGGGAAACG 62.367 66.667 6.13 0.00 41.64 3.60
761 763 3.845625 GTGGGAAACGCACAAAGAG 57.154 52.632 12.66 0.00 44.84 2.85
798 800 3.019564 CAGGCCCAAATGTAAGGAGAAG 58.980 50.000 0.00 0.00 0.00 2.85
846 848 1.754380 GCTTTCGGCCCAACCCTTTT 61.754 55.000 0.00 0.00 33.26 2.27
847 849 0.317160 CTTTCGGCCCAACCCTTTTC 59.683 55.000 0.00 0.00 33.26 2.29
850 852 0.037160 TCGGCCCAACCCTTTTCTAC 59.963 55.000 0.00 0.00 33.26 2.59
872 874 2.156098 CTAGGACTAGACTGATCGCCC 58.844 57.143 0.00 0.00 35.21 6.13
943 945 2.759795 GTTCAGCCTTGCCCCTCT 59.240 61.111 0.00 0.00 0.00 3.69
1126 1128 3.185246 ACCAACATCGATTAGCCTCAG 57.815 47.619 0.00 0.00 0.00 3.35
1139 1141 1.004044 AGCCTCAGACACAGGAAATGG 59.996 52.381 0.00 0.00 31.91 3.16
1172 1174 7.979444 TTCTTTTACGAGGATTTGAGTGAAT 57.021 32.000 0.00 0.00 0.00 2.57
1176 1178 6.968131 TTACGAGGATTTGAGTGAATTCAG 57.032 37.500 8.80 0.00 0.00 3.02
1296 1299 7.550906 GTGCTTGATTTTCTGTCTAGGTTAGAT 59.449 37.037 0.00 0.00 37.13 1.98
1358 1383 7.471721 TCTGTTTCTTATGTAATGCCAATTCG 58.528 34.615 0.00 0.00 0.00 3.34
1374 1399 4.796830 CCAATTCGAATGAGCAGACAATTG 59.203 41.667 12.25 3.24 0.00 2.32
1426 1451 6.374333 TCAGCTGTTCCTGTAATCAATTTACC 59.626 38.462 14.67 0.00 39.63 2.85
1556 1581 9.745018 CCAGGTATATGGATATCTGAACAAATT 57.255 33.333 6.77 0.00 46.07 1.82
1559 1584 9.236006 GGTATATGGATATCTGAACAAATTGCT 57.764 33.333 2.05 0.00 0.00 3.91
1592 1617 6.144241 TGTTCATTTGTTTTTCGCAGATGATG 59.856 34.615 0.00 0.00 37.33 3.07
1595 1620 3.454042 TGTTTTTCGCAGATGATGACG 57.546 42.857 0.00 0.00 35.04 4.35
1597 1622 1.725641 TTTTCGCAGATGATGACGCT 58.274 45.000 0.00 0.00 35.04 5.07
1928 1985 9.838339 ATTCTCATAGTTTAGATGTTACAAGGG 57.162 33.333 0.00 0.00 0.00 3.95
1929 1986 8.603898 TCTCATAGTTTAGATGTTACAAGGGA 57.396 34.615 0.00 0.00 0.00 4.20
1930 1987 9.213777 TCTCATAGTTTAGATGTTACAAGGGAT 57.786 33.333 0.00 0.00 0.00 3.85
1931 1988 9.838339 CTCATAGTTTAGATGTTACAAGGGATT 57.162 33.333 0.00 0.00 0.00 3.01
1932 1989 9.613428 TCATAGTTTAGATGTTACAAGGGATTG 57.387 33.333 0.00 0.00 0.00 2.67
1933 1990 9.613428 CATAGTTTAGATGTTACAAGGGATTGA 57.387 33.333 0.00 0.00 0.00 2.57
1934 1991 7.923414 AGTTTAGATGTTACAAGGGATTGAC 57.077 36.000 0.00 0.00 0.00 3.18
1935 1992 6.884836 AGTTTAGATGTTACAAGGGATTGACC 59.115 38.462 0.00 0.00 38.08 4.02
1936 1993 4.927267 AGATGTTACAAGGGATTGACCA 57.073 40.909 0.00 0.00 41.20 4.02
1937 1994 5.456921 AGATGTTACAAGGGATTGACCAT 57.543 39.130 0.00 0.00 41.20 3.55
1938 1995 6.575244 AGATGTTACAAGGGATTGACCATA 57.425 37.500 0.00 0.00 41.20 2.74
1939 1996 7.154191 AGATGTTACAAGGGATTGACCATAT 57.846 36.000 0.00 0.00 41.20 1.78
1940 1997 7.586349 AGATGTTACAAGGGATTGACCATATT 58.414 34.615 0.00 0.00 41.20 1.28
1941 1998 8.723365 AGATGTTACAAGGGATTGACCATATTA 58.277 33.333 0.00 0.00 41.20 0.98
1942 1999 9.520515 GATGTTACAAGGGATTGACCATATTAT 57.479 33.333 0.00 0.00 41.20 1.28
1943 2000 9.881773 ATGTTACAAGGGATTGACCATATTATT 57.118 29.630 0.00 0.00 41.20 1.40
2113 2170 9.862371 ACTCGGTATGAAACTATGAATATGATC 57.138 33.333 0.00 0.00 0.00 2.92
2233 2290 9.187996 GTTTACTCTACAGGTCTATTAAGGTCT 57.812 37.037 0.00 0.00 0.00 3.85
2926 2986 6.403200 GCAAACATATACACGTGTTTCCATCT 60.403 38.462 28.55 3.79 44.27 2.90
2958 3018 8.041143 TCTACAATTATGGCTTAGGGTGTTAT 57.959 34.615 0.00 0.00 0.00 1.89
2976 3036 7.175990 GGGTGTTATTAGTTCCAAAGACATTCA 59.824 37.037 0.00 0.00 0.00 2.57
3102 3166 5.123344 GCCAGTATCATACTTTCACGGTTTT 59.877 40.000 0.00 0.00 36.76 2.43
3251 3315 6.952773 TCTTTTTGTACTGGTTACTGCAAT 57.047 33.333 0.00 0.00 0.00 3.56
3630 3694 0.443869 GAATCGATGCGTGCAACAGT 59.556 50.000 0.00 0.00 35.74 3.55
3749 3813 2.791347 TACAATACAACGCCACCCAT 57.209 45.000 0.00 0.00 0.00 4.00
3752 3816 3.422796 ACAATACAACGCCACCCATAAA 58.577 40.909 0.00 0.00 0.00 1.40
3777 3841 3.240134 GAGCAACTCTGACCGGGCA 62.240 63.158 11.16 11.16 0.00 5.36
3990 4054 0.523072 CATTTGGTGGTGAAGAGCCG 59.477 55.000 0.00 0.00 0.00 5.52
4192 4279 3.027412 GAGATGGAGCTAGGTCTGAACA 58.973 50.000 20.67 10.94 0.00 3.18
4216 4303 2.294791 CCCGCCTGTAATGTTTTGTTCA 59.705 45.455 0.00 0.00 0.00 3.18
4223 4310 7.344441 GCCTGTAATGTTTTGTTCAAATGTTC 58.656 34.615 0.00 0.00 0.00 3.18
4306 4428 4.872664 CCGATTCGGCTATTCTTTCTAGT 58.127 43.478 12.95 0.00 41.17 2.57
4307 4429 6.010294 CCGATTCGGCTATTCTTTCTAGTA 57.990 41.667 12.95 0.00 41.17 1.82
4309 4431 6.528423 CCGATTCGGCTATTCTTTCTAGTATG 59.472 42.308 12.95 0.00 41.17 2.39
4310 4432 7.085116 CGATTCGGCTATTCTTTCTAGTATGT 58.915 38.462 0.00 0.00 0.00 2.29
4311 4433 7.595502 CGATTCGGCTATTCTTTCTAGTATGTT 59.404 37.037 0.00 0.00 0.00 2.71
4312 4434 9.262358 GATTCGGCTATTCTTTCTAGTATGTTT 57.738 33.333 0.00 0.00 0.00 2.83
4313 4435 8.644318 TTCGGCTATTCTTTCTAGTATGTTTC 57.356 34.615 0.00 0.00 0.00 2.78
4314 4436 7.778083 TCGGCTATTCTTTCTAGTATGTTTCA 58.222 34.615 0.00 0.00 0.00 2.69
4315 4437 7.921214 TCGGCTATTCTTTCTAGTATGTTTCAG 59.079 37.037 0.00 0.00 0.00 3.02
4316 4438 7.707035 CGGCTATTCTTTCTAGTATGTTTCAGT 59.293 37.037 0.00 0.00 0.00 3.41
4317 4439 9.036671 GGCTATTCTTTCTAGTATGTTTCAGTC 57.963 37.037 0.00 0.00 0.00 3.51
4318 4440 9.810545 GCTATTCTTTCTAGTATGTTTCAGTCT 57.189 33.333 0.00 0.00 0.00 3.24
4321 4443 9.660180 ATTCTTTCTAGTATGTTTCAGTCTTCC 57.340 33.333 0.00 0.00 0.00 3.46
4400 4523 4.602340 AGAACACCAGTTACGTCTCATT 57.398 40.909 0.00 0.00 38.30 2.57
4403 4526 5.465724 AGAACACCAGTTACGTCTCATTTTC 59.534 40.000 0.00 0.00 38.30 2.29
4405 4528 4.989168 ACACCAGTTACGTCTCATTTTCTC 59.011 41.667 0.00 0.00 0.00 2.87
4411 4534 2.966050 ACGTCTCATTTTCTCTGAGGC 58.034 47.619 4.59 0.00 41.02 4.70
4480 4607 5.046735 AGCTTATCACTCAATCTGTGTCAGT 60.047 40.000 0.00 0.00 36.83 3.41
4484 4611 5.378292 TCACTCAATCTGTGTCAGTAGTC 57.622 43.478 0.00 0.00 36.83 2.59
4486 4613 3.191581 ACTCAATCTGTGTCAGTAGTCCG 59.808 47.826 0.00 0.00 32.61 4.79
4491 4618 2.934553 TCTGTGTCAGTAGTCCGATACG 59.065 50.000 0.00 0.00 32.61 3.06
4509 4636 6.090358 CCGATACGTATTTGCTTTCGGAATAT 59.910 38.462 21.24 0.00 45.60 1.28
4626 4785 7.148390 TGTGTCAAAAACGTCTTACATTCTTGA 60.148 33.333 0.00 0.00 0.00 3.02
4665 4824 2.885135 AATCTTGTGATGTCCTGCCA 57.115 45.000 0.00 0.00 32.44 4.92
4696 4855 4.757149 GGTCCAATATATTGAGTGCTCCAC 59.243 45.833 24.17 8.92 40.14 4.02
4819 4986 5.182190 TGACAGTAGCAGTATCTATAGCAGC 59.818 44.000 0.00 0.00 0.00 5.25
4824 4991 2.983136 GCAGTATCTATAGCAGCGTGTG 59.017 50.000 0.00 0.00 0.00 3.82
4931 5098 1.931635 AAGGCCGTCTCTTCTCTTCT 58.068 50.000 0.00 0.00 0.00 2.85
4932 5099 1.470051 AGGCCGTCTCTTCTCTTCTC 58.530 55.000 0.00 0.00 0.00 2.87
4933 5100 1.005450 AGGCCGTCTCTTCTCTTCTCT 59.995 52.381 0.00 0.00 0.00 3.10
4934 5101 1.822371 GGCCGTCTCTTCTCTTCTCTT 59.178 52.381 0.00 0.00 0.00 2.85
4935 5102 2.416701 GGCCGTCTCTTCTCTTCTCTTG 60.417 54.545 0.00 0.00 0.00 3.02
5028 5202 0.616371 ACGCATGCCTGGGTAAGTTA 59.384 50.000 13.15 0.00 45.77 2.24
5035 5209 1.940613 GCCTGGGTAAGTTATCTTGCG 59.059 52.381 0.00 0.00 37.20 4.85
5041 5215 3.370209 GGGTAAGTTATCTTGCGGACCTT 60.370 47.826 0.00 0.00 37.20 3.50
5043 5217 3.983044 AAGTTATCTTGCGGACCTTCT 57.017 42.857 0.00 0.00 32.09 2.85
5044 5218 3.983044 AGTTATCTTGCGGACCTTCTT 57.017 42.857 0.00 0.00 0.00 2.52
5045 5219 4.287766 AGTTATCTTGCGGACCTTCTTT 57.712 40.909 0.00 0.00 0.00 2.52
5046 5220 4.003648 AGTTATCTTGCGGACCTTCTTTG 58.996 43.478 0.00 0.00 0.00 2.77
5047 5221 1.826385 ATCTTGCGGACCTTCTTTGG 58.174 50.000 0.00 0.00 0.00 3.28
5048 5222 0.472471 TCTTGCGGACCTTCTTTGGT 59.528 50.000 0.00 0.00 44.10 3.67
5049 5223 1.695242 TCTTGCGGACCTTCTTTGGTA 59.305 47.619 0.00 0.00 41.00 3.25
5051 5225 2.178912 TGCGGACCTTCTTTGGTAAG 57.821 50.000 0.00 0.00 41.00 2.34
5053 5227 2.304761 TGCGGACCTTCTTTGGTAAGAT 59.695 45.455 0.00 0.00 40.01 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 8.960075 CGAACATTTTCTAAACACCGTATTTTT 58.040 29.630 0.00 0.00 0.00 1.94
9 10 8.130469 ACGAACATTTTCTAAACACCGTATTTT 58.870 29.630 0.00 0.00 0.00 1.82
10 11 7.588488 CACGAACATTTTCTAAACACCGTATTT 59.412 33.333 0.00 0.00 0.00 1.40
11 12 7.041916 TCACGAACATTTTCTAAACACCGTATT 60.042 33.333 0.00 0.00 0.00 1.89
12 13 6.424509 TCACGAACATTTTCTAAACACCGTAT 59.575 34.615 0.00 0.00 0.00 3.06
13 14 5.752472 TCACGAACATTTTCTAAACACCGTA 59.248 36.000 0.00 0.00 0.00 4.02
14 15 4.571580 TCACGAACATTTTCTAAACACCGT 59.428 37.500 0.00 0.00 0.00 4.83
15 16 4.901881 GTCACGAACATTTTCTAAACACCG 59.098 41.667 0.00 0.00 0.00 4.94
16 17 5.812652 TGTCACGAACATTTTCTAAACACC 58.187 37.500 0.00 0.00 31.20 4.16
162 163 8.919145 TGTCTACCTTTTTCCAAAACACATTAT 58.081 29.630 0.00 0.00 0.00 1.28
163 164 8.294954 TGTCTACCTTTTTCCAAAACACATTA 57.705 30.769 0.00 0.00 0.00 1.90
164 165 7.176589 TGTCTACCTTTTTCCAAAACACATT 57.823 32.000 0.00 0.00 0.00 2.71
165 166 6.783708 TGTCTACCTTTTTCCAAAACACAT 57.216 33.333 0.00 0.00 0.00 3.21
166 167 6.153680 ACATGTCTACCTTTTTCCAAAACACA 59.846 34.615 0.00 0.00 0.00 3.72
167 168 6.569780 ACATGTCTACCTTTTTCCAAAACAC 58.430 36.000 0.00 0.00 0.00 3.32
168 169 6.783708 ACATGTCTACCTTTTTCCAAAACA 57.216 33.333 0.00 0.00 0.00 2.83
169 170 6.478673 CCAACATGTCTACCTTTTTCCAAAAC 59.521 38.462 0.00 0.00 0.00 2.43
170 171 6.407525 CCCAACATGTCTACCTTTTTCCAAAA 60.408 38.462 0.00 0.00 0.00 2.44
171 172 5.069781 CCCAACATGTCTACCTTTTTCCAAA 59.930 40.000 0.00 0.00 0.00 3.28
172 173 4.586841 CCCAACATGTCTACCTTTTTCCAA 59.413 41.667 0.00 0.00 0.00 3.53
173 174 4.141135 TCCCAACATGTCTACCTTTTTCCA 60.141 41.667 0.00 0.00 0.00 3.53
174 175 4.403734 TCCCAACATGTCTACCTTTTTCC 58.596 43.478 0.00 0.00 0.00 3.13
175 176 6.399639 TTTCCCAACATGTCTACCTTTTTC 57.600 37.500 0.00 0.00 0.00 2.29
176 177 6.800072 TTTTCCCAACATGTCTACCTTTTT 57.200 33.333 0.00 0.00 0.00 1.94
177 178 6.800072 TTTTTCCCAACATGTCTACCTTTT 57.200 33.333 0.00 0.00 0.00 2.27
238 239 9.929722 GTTTTGTTTTTCTTCACAAGTTTTCTT 57.070 25.926 0.00 0.00 41.31 2.52
239 240 9.103861 TGTTTTGTTTTTCTTCACAAGTTTTCT 57.896 25.926 0.00 0.00 34.43 2.52
240 241 9.368921 CTGTTTTGTTTTTCTTCACAAGTTTTC 57.631 29.630 0.00 0.00 34.43 2.29
241 242 9.103861 TCTGTTTTGTTTTTCTTCACAAGTTTT 57.896 25.926 0.00 0.00 34.43 2.43
242 243 8.655651 TCTGTTTTGTTTTTCTTCACAAGTTT 57.344 26.923 0.00 0.00 34.43 2.66
243 244 8.655651 TTCTGTTTTGTTTTTCTTCACAAGTT 57.344 26.923 0.00 0.00 34.43 2.66
244 245 8.547894 GTTTCTGTTTTGTTTTTCTTCACAAGT 58.452 29.630 0.00 0.00 34.43 3.16
245 246 8.009409 GGTTTCTGTTTTGTTTTTCTTCACAAG 58.991 33.333 0.00 0.00 34.43 3.16
246 247 7.713073 AGGTTTCTGTTTTGTTTTTCTTCACAA 59.287 29.630 0.00 0.00 0.00 3.33
247 248 7.170658 CAGGTTTCTGTTTTGTTTTTCTTCACA 59.829 33.333 0.00 0.00 36.30 3.58
248 249 7.383843 TCAGGTTTCTGTTTTGTTTTTCTTCAC 59.616 33.333 0.00 0.00 41.59 3.18
249 250 7.437748 TCAGGTTTCTGTTTTGTTTTTCTTCA 58.562 30.769 0.00 0.00 41.59 3.02
250 251 7.883229 TCAGGTTTCTGTTTTGTTTTTCTTC 57.117 32.000 0.00 0.00 41.59 2.87
251 252 8.147704 TCTTCAGGTTTCTGTTTTGTTTTTCTT 58.852 29.630 0.00 0.00 41.59 2.52
252 253 7.666623 TCTTCAGGTTTCTGTTTTGTTTTTCT 58.333 30.769 0.00 0.00 41.59 2.52
253 254 7.883229 TCTTCAGGTTTCTGTTTTGTTTTTC 57.117 32.000 0.00 0.00 41.59 2.29
254 255 8.669946 TTTCTTCAGGTTTCTGTTTTGTTTTT 57.330 26.923 0.00 0.00 41.59 1.94
255 256 8.669946 TTTTCTTCAGGTTTCTGTTTTGTTTT 57.330 26.923 0.00 0.00 41.59 2.43
256 257 8.846943 ATTTTCTTCAGGTTTCTGTTTTGTTT 57.153 26.923 0.00 0.00 41.59 2.83
257 258 8.093927 TGATTTTCTTCAGGTTTCTGTTTTGTT 58.906 29.630 0.00 0.00 41.59 2.83
258 259 7.610865 TGATTTTCTTCAGGTTTCTGTTTTGT 58.389 30.769 0.00 0.00 41.59 2.83
259 260 8.477984 TTGATTTTCTTCAGGTTTCTGTTTTG 57.522 30.769 0.00 0.00 41.59 2.44
260 261 9.154847 CTTTGATTTTCTTCAGGTTTCTGTTTT 57.845 29.630 0.00 0.00 41.59 2.43
261 262 7.765819 CCTTTGATTTTCTTCAGGTTTCTGTTT 59.234 33.333 0.00 0.00 41.59 2.83
262 263 7.124147 TCCTTTGATTTTCTTCAGGTTTCTGTT 59.876 33.333 0.00 0.00 41.59 3.16
263 264 6.607198 TCCTTTGATTTTCTTCAGGTTTCTGT 59.393 34.615 0.00 0.00 41.59 3.41
264 265 7.042797 TCCTTTGATTTTCTTCAGGTTTCTG 57.957 36.000 0.00 0.00 42.21 3.02
265 266 7.343057 AGTTCCTTTGATTTTCTTCAGGTTTCT 59.657 33.333 0.00 0.00 0.00 2.52
266 267 7.436376 CAGTTCCTTTGATTTTCTTCAGGTTTC 59.564 37.037 0.00 0.00 0.00 2.78
267 268 7.267857 CAGTTCCTTTGATTTTCTTCAGGTTT 58.732 34.615 0.00 0.00 0.00 3.27
268 269 6.183360 CCAGTTCCTTTGATTTTCTTCAGGTT 60.183 38.462 0.00 0.00 0.00 3.50
269 270 5.302823 CCAGTTCCTTTGATTTTCTTCAGGT 59.697 40.000 0.00 0.00 0.00 4.00
270 271 5.302823 ACCAGTTCCTTTGATTTTCTTCAGG 59.697 40.000 0.00 0.00 0.00 3.86
271 272 6.211515 CACCAGTTCCTTTGATTTTCTTCAG 58.788 40.000 0.00 0.00 0.00 3.02
272 273 5.068987 CCACCAGTTCCTTTGATTTTCTTCA 59.931 40.000 0.00 0.00 0.00 3.02
273 274 5.069119 ACCACCAGTTCCTTTGATTTTCTTC 59.931 40.000 0.00 0.00 0.00 2.87
274 275 4.962362 ACCACCAGTTCCTTTGATTTTCTT 59.038 37.500 0.00 0.00 0.00 2.52
275 276 4.342092 CACCACCAGTTCCTTTGATTTTCT 59.658 41.667 0.00 0.00 0.00 2.52
276 277 4.340950 TCACCACCAGTTCCTTTGATTTTC 59.659 41.667 0.00 0.00 0.00 2.29
277 278 4.285863 TCACCACCAGTTCCTTTGATTTT 58.714 39.130 0.00 0.00 0.00 1.82
278 279 3.909732 TCACCACCAGTTCCTTTGATTT 58.090 40.909 0.00 0.00 0.00 2.17
279 280 3.593442 TCACCACCAGTTCCTTTGATT 57.407 42.857 0.00 0.00 0.00 2.57
280 281 3.593442 TTCACCACCAGTTCCTTTGAT 57.407 42.857 0.00 0.00 0.00 2.57
281 282 3.020984 GTTTCACCACCAGTTCCTTTGA 58.979 45.455 0.00 0.00 0.00 2.69
282 283 2.757868 TGTTTCACCACCAGTTCCTTTG 59.242 45.455 0.00 0.00 0.00 2.77
283 284 2.758423 GTGTTTCACCACCAGTTCCTTT 59.242 45.455 0.00 0.00 0.00 3.11
284 285 2.291282 TGTGTTTCACCACCAGTTCCTT 60.291 45.455 0.00 0.00 34.35 3.36
285 286 1.283613 TGTGTTTCACCACCAGTTCCT 59.716 47.619 0.00 0.00 34.35 3.36
286 287 1.757682 TGTGTTTCACCACCAGTTCC 58.242 50.000 0.00 0.00 34.35 3.62
287 288 3.859411 TTTGTGTTTCACCACCAGTTC 57.141 42.857 0.00 0.00 34.35 3.01
288 289 4.608948 TTTTTGTGTTTCACCACCAGTT 57.391 36.364 0.00 0.00 34.35 3.16
289 290 4.502962 CATTTTTGTGTTTCACCACCAGT 58.497 39.130 0.00 0.00 34.35 4.00
290 291 3.870419 CCATTTTTGTGTTTCACCACCAG 59.130 43.478 0.00 0.00 34.35 4.00
291 292 3.515502 TCCATTTTTGTGTTTCACCACCA 59.484 39.130 0.00 0.00 34.35 4.17
292 293 4.130286 TCCATTTTTGTGTTTCACCACC 57.870 40.909 0.00 0.00 34.35 4.61
293 294 6.487689 TTTTCCATTTTTGTGTTTCACCAC 57.512 33.333 0.00 0.00 32.73 4.16
294 295 5.123027 GCTTTTCCATTTTTGTGTTTCACCA 59.877 36.000 0.00 0.00 32.73 4.17
295 296 5.123027 TGCTTTTCCATTTTTGTGTTTCACC 59.877 36.000 0.00 0.00 32.73 4.02
296 297 6.175712 TGCTTTTCCATTTTTGTGTTTCAC 57.824 33.333 0.00 0.00 34.56 3.18
297 298 6.128063 CCTTGCTTTTCCATTTTTGTGTTTCA 60.128 34.615 0.00 0.00 0.00 2.69
298 299 6.093357 TCCTTGCTTTTCCATTTTTGTGTTTC 59.907 34.615 0.00 0.00 0.00 2.78
299 300 5.942826 TCCTTGCTTTTCCATTTTTGTGTTT 59.057 32.000 0.00 0.00 0.00 2.83
300 301 5.495640 TCCTTGCTTTTCCATTTTTGTGTT 58.504 33.333 0.00 0.00 0.00 3.32
301 302 5.096443 TCCTTGCTTTTCCATTTTTGTGT 57.904 34.783 0.00 0.00 0.00 3.72
302 303 6.434018 TTTCCTTGCTTTTCCATTTTTGTG 57.566 33.333 0.00 0.00 0.00 3.33
303 304 6.127758 GGTTTTCCTTGCTTTTCCATTTTTGT 60.128 34.615 0.00 0.00 36.94 2.83
304 305 6.264832 GGTTTTCCTTGCTTTTCCATTTTTG 58.735 36.000 0.00 0.00 36.94 2.44
305 306 6.449635 GGTTTTCCTTGCTTTTCCATTTTT 57.550 33.333 0.00 0.00 36.94 1.94
321 322 7.621796 TCTTCACTAGATTCCTAAGGTTTTCC 58.378 38.462 0.00 0.00 41.05 3.13
322 323 9.503399 TTTCTTCACTAGATTCCTAAGGTTTTC 57.497 33.333 0.00 0.00 31.54 2.29
323 324 9.286170 GTTTCTTCACTAGATTCCTAAGGTTTT 57.714 33.333 0.00 0.00 31.54 2.43
324 325 7.603024 CGTTTCTTCACTAGATTCCTAAGGTTT 59.397 37.037 0.00 0.00 31.54 3.27
325 326 7.097834 CGTTTCTTCACTAGATTCCTAAGGTT 58.902 38.462 0.00 0.00 31.54 3.50
326 327 6.631962 CGTTTCTTCACTAGATTCCTAAGGT 58.368 40.000 0.00 0.00 31.54 3.50
327 328 5.520649 GCGTTTCTTCACTAGATTCCTAAGG 59.479 44.000 0.00 0.00 31.54 2.69
328 329 6.100004 TGCGTTTCTTCACTAGATTCCTAAG 58.900 40.000 0.00 0.00 31.54 2.18
329 330 6.032956 TGCGTTTCTTCACTAGATTCCTAA 57.967 37.500 0.00 0.00 31.54 2.69
330 331 5.417894 TCTGCGTTTCTTCACTAGATTCCTA 59.582 40.000 0.00 0.00 31.54 2.94
331 332 4.220821 TCTGCGTTTCTTCACTAGATTCCT 59.779 41.667 0.00 0.00 31.54 3.36
332 333 4.495422 TCTGCGTTTCTTCACTAGATTCC 58.505 43.478 0.00 0.00 31.54 3.01
333 334 6.467723 TTTCTGCGTTTCTTCACTAGATTC 57.532 37.500 0.00 0.00 31.54 2.52
334 335 6.260050 TGTTTTCTGCGTTTCTTCACTAGATT 59.740 34.615 0.00 0.00 31.54 2.40
335 336 5.758296 TGTTTTCTGCGTTTCTTCACTAGAT 59.242 36.000 0.00 0.00 31.54 1.98
336 337 5.113383 TGTTTTCTGCGTTTCTTCACTAGA 58.887 37.500 0.00 0.00 0.00 2.43
337 338 5.234329 TCTGTTTTCTGCGTTTCTTCACTAG 59.766 40.000 0.00 0.00 0.00 2.57
338 339 5.006358 GTCTGTTTTCTGCGTTTCTTCACTA 59.994 40.000 0.00 0.00 0.00 2.74
339 340 3.938963 TCTGTTTTCTGCGTTTCTTCACT 59.061 39.130 0.00 0.00 0.00 3.41
340 341 4.029043 GTCTGTTTTCTGCGTTTCTTCAC 58.971 43.478 0.00 0.00 0.00 3.18
341 342 3.064820 GGTCTGTTTTCTGCGTTTCTTCA 59.935 43.478 0.00 0.00 0.00 3.02
342 343 3.064820 TGGTCTGTTTTCTGCGTTTCTTC 59.935 43.478 0.00 0.00 0.00 2.87
343 344 3.013921 TGGTCTGTTTTCTGCGTTTCTT 58.986 40.909 0.00 0.00 0.00 2.52
344 345 2.639065 TGGTCTGTTTTCTGCGTTTCT 58.361 42.857 0.00 0.00 0.00 2.52
345 346 3.414549 TTGGTCTGTTTTCTGCGTTTC 57.585 42.857 0.00 0.00 0.00 2.78
346 347 3.859411 TTTGGTCTGTTTTCTGCGTTT 57.141 38.095 0.00 0.00 0.00 3.60
347 348 3.859411 TTTTGGTCTGTTTTCTGCGTT 57.141 38.095 0.00 0.00 0.00 4.84
348 349 4.111916 CAATTTTGGTCTGTTTTCTGCGT 58.888 39.130 0.00 0.00 0.00 5.24
349 350 4.358851 TCAATTTTGGTCTGTTTTCTGCG 58.641 39.130 0.00 0.00 0.00 5.18
350 351 6.660887 TTTCAATTTTGGTCTGTTTTCTGC 57.339 33.333 0.00 0.00 0.00 4.26
387 388 8.956426 GGATGTACACCTTTCATTTTCTATTCA 58.044 33.333 0.00 0.00 0.00 2.57
388 389 8.956426 TGGATGTACACCTTTCATTTTCTATTC 58.044 33.333 0.00 0.00 0.00 1.75
389 390 8.877864 TGGATGTACACCTTTCATTTTCTATT 57.122 30.769 0.00 0.00 0.00 1.73
390 391 9.479549 AATGGATGTACACCTTTCATTTTCTAT 57.520 29.630 0.00 0.00 0.00 1.98
391 392 8.877864 AATGGATGTACACCTTTCATTTTCTA 57.122 30.769 0.00 0.00 0.00 2.10
392 393 7.781324 AATGGATGTACACCTTTCATTTTCT 57.219 32.000 0.00 0.00 0.00 2.52
393 394 8.519526 TGTAATGGATGTACACCTTTCATTTTC 58.480 33.333 6.75 3.24 0.00 2.29
394 395 8.415950 TGTAATGGATGTACACCTTTCATTTT 57.584 30.769 6.75 0.00 0.00 1.82
395 396 8.415950 TTGTAATGGATGTACACCTTTCATTT 57.584 30.769 6.75 0.00 31.27 2.32
396 397 7.669722 ACTTGTAATGGATGTACACCTTTCATT 59.330 33.333 14.52 10.97 31.27 2.57
397 398 7.175104 ACTTGTAATGGATGTACACCTTTCAT 58.825 34.615 14.52 1.98 31.27 2.57
398 399 6.539173 ACTTGTAATGGATGTACACCTTTCA 58.461 36.000 14.52 11.33 31.27 2.69
399 400 6.093633 GGACTTGTAATGGATGTACACCTTTC 59.906 42.308 14.52 3.10 31.27 2.62
400 401 5.944007 GGACTTGTAATGGATGTACACCTTT 59.056 40.000 0.00 8.91 31.27 3.11
401 402 5.013704 TGGACTTGTAATGGATGTACACCTT 59.986 40.000 0.00 0.00 31.27 3.50
402 403 4.534500 TGGACTTGTAATGGATGTACACCT 59.466 41.667 0.00 0.00 31.27 4.00
403 404 4.839121 TGGACTTGTAATGGATGTACACC 58.161 43.478 0.00 2.40 31.27 4.16
404 405 6.183360 CCAATGGACTTGTAATGGATGTACAC 60.183 42.308 0.00 0.00 31.27 2.90
405 406 5.885352 CCAATGGACTTGTAATGGATGTACA 59.115 40.000 0.00 0.00 32.61 2.90
406 407 5.221048 GCCAATGGACTTGTAATGGATGTAC 60.221 44.000 2.05 0.00 32.61 2.90
407 408 4.887071 GCCAATGGACTTGTAATGGATGTA 59.113 41.667 2.05 0.00 32.61 2.29
408 409 3.701040 GCCAATGGACTTGTAATGGATGT 59.299 43.478 2.05 0.00 32.61 3.06
409 410 3.956199 AGCCAATGGACTTGTAATGGATG 59.044 43.478 2.05 0.00 32.61 3.51
410 411 4.255510 AGCCAATGGACTTGTAATGGAT 57.744 40.909 2.05 0.00 32.61 3.41
411 412 3.737559 AGCCAATGGACTTGTAATGGA 57.262 42.857 2.05 0.00 32.61 3.41
412 413 3.312421 CGTAGCCAATGGACTTGTAATGG 59.688 47.826 2.05 0.00 32.61 3.16
413 414 4.536364 CGTAGCCAATGGACTTGTAATG 57.464 45.455 2.05 0.00 32.61 1.90
429 430 2.530001 GTTCACGAACAGCGCGTAGC 62.530 60.000 8.43 0.00 45.56 3.58
430 431 1.411089 GTTCACGAACAGCGCGTAG 59.589 57.895 8.43 2.68 46.04 3.51
431 432 2.017783 GGTTCACGAACAGCGCGTA 61.018 57.895 8.43 0.00 46.04 4.42
432 433 3.335534 GGTTCACGAACAGCGCGT 61.336 61.111 8.43 0.00 46.04 6.01
433 434 3.281751 CTGGTTCACGAACAGCGCG 62.282 63.158 11.77 0.00 46.04 6.86
434 435 1.891060 CTCTGGTTCACGAACAGCGC 61.891 60.000 11.77 0.00 46.04 5.92
435 436 0.597637 ACTCTGGTTCACGAACAGCG 60.598 55.000 11.77 5.40 42.85 5.18
436 437 1.583054 AACTCTGGTTCACGAACAGC 58.417 50.000 11.77 0.00 42.85 4.40
437 438 4.238761 TCTAACTCTGGTTCACGAACAG 57.761 45.455 11.77 7.42 42.85 3.16
438 439 4.866508 ATCTAACTCTGGTTCACGAACA 57.133 40.909 11.77 0.00 42.85 3.18
439 440 7.647907 TTTTATCTAACTCTGGTTCACGAAC 57.352 36.000 1.12 1.12 40.45 3.95
463 464 4.816925 GCCAGAACTATATCTCGCCTTTTT 59.183 41.667 0.00 0.00 28.58 1.94
464 465 4.381411 GCCAGAACTATATCTCGCCTTTT 58.619 43.478 0.00 0.00 28.58 2.27
465 466 3.553096 CGCCAGAACTATATCTCGCCTTT 60.553 47.826 0.00 0.00 30.81 3.11
466 467 2.029828 CGCCAGAACTATATCTCGCCTT 60.030 50.000 0.00 0.00 30.81 4.35
467 468 1.542030 CGCCAGAACTATATCTCGCCT 59.458 52.381 0.00 0.00 30.81 5.52
468 469 1.983972 CGCCAGAACTATATCTCGCC 58.016 55.000 0.00 0.00 30.81 5.54
469 470 1.068194 AGCGCCAGAACTATATCTCGC 60.068 52.381 2.29 0.00 40.78 5.03
470 471 2.226674 TGAGCGCCAGAACTATATCTCG 59.773 50.000 2.29 0.00 0.00 4.04
471 472 3.924918 TGAGCGCCAGAACTATATCTC 57.075 47.619 2.29 0.00 0.00 2.75
472 473 4.881019 AATGAGCGCCAGAACTATATCT 57.119 40.909 2.29 0.00 0.00 1.98
473 474 4.991056 TCAAATGAGCGCCAGAACTATATC 59.009 41.667 2.29 0.00 0.00 1.63
474 475 4.752101 GTCAAATGAGCGCCAGAACTATAT 59.248 41.667 2.29 0.00 0.00 0.86
475 476 4.119862 GTCAAATGAGCGCCAGAACTATA 58.880 43.478 2.29 0.00 0.00 1.31
476 477 2.939103 GTCAAATGAGCGCCAGAACTAT 59.061 45.455 2.29 0.00 0.00 2.12
477 478 2.346803 GTCAAATGAGCGCCAGAACTA 58.653 47.619 2.29 0.00 0.00 2.24
478 479 1.160137 GTCAAATGAGCGCCAGAACT 58.840 50.000 2.29 0.00 0.00 3.01
479 480 0.169009 GGTCAAATGAGCGCCAGAAC 59.831 55.000 2.29 0.00 32.58 3.01
480 481 2.555123 GGTCAAATGAGCGCCAGAA 58.445 52.632 2.29 0.00 32.58 3.02
481 482 4.301505 GGTCAAATGAGCGCCAGA 57.698 55.556 2.29 0.00 32.58 3.86
487 488 1.880027 AGTGGTTTCGGTCAAATGAGC 59.120 47.619 2.57 2.57 39.04 4.26
488 489 5.880054 ATTAGTGGTTTCGGTCAAATGAG 57.120 39.130 0.00 0.00 0.00 2.90
489 490 7.747155 TTAATTAGTGGTTTCGGTCAAATGA 57.253 32.000 0.00 0.00 0.00 2.57
490 491 8.804688 TTTTAATTAGTGGTTTCGGTCAAATG 57.195 30.769 0.00 0.00 0.00 2.32
517 518 9.520515 AGTGGAAATGACATTTGTAAAGAGTAT 57.479 29.630 18.00 0.00 31.47 2.12
518 519 8.918202 AGTGGAAATGACATTTGTAAAGAGTA 57.082 30.769 18.00 0.00 31.47 2.59
519 520 7.823745 AGTGGAAATGACATTTGTAAAGAGT 57.176 32.000 18.00 0.00 31.47 3.24
520 521 9.185192 GAAAGTGGAAATGACATTTGTAAAGAG 57.815 33.333 18.00 0.00 31.47 2.85
521 522 8.912988 AGAAAGTGGAAATGACATTTGTAAAGA 58.087 29.630 18.00 0.00 31.47 2.52
522 523 9.185192 GAGAAAGTGGAAATGACATTTGTAAAG 57.815 33.333 18.00 0.00 31.47 1.85
523 524 8.690884 TGAGAAAGTGGAAATGACATTTGTAAA 58.309 29.630 18.00 0.00 31.47 2.01
524 525 8.231692 TGAGAAAGTGGAAATGACATTTGTAA 57.768 30.769 18.00 0.91 31.47 2.41
525 526 7.815840 TGAGAAAGTGGAAATGACATTTGTA 57.184 32.000 18.00 4.11 31.47 2.41
526 527 6.713762 TGAGAAAGTGGAAATGACATTTGT 57.286 33.333 18.00 0.00 31.47 2.83
527 528 9.865321 AATATGAGAAAGTGGAAATGACATTTG 57.135 29.630 18.00 0.00 31.47 2.32
530 531 8.830580 CGTAATATGAGAAAGTGGAAATGACAT 58.169 33.333 0.00 0.00 0.00 3.06
531 532 8.038351 TCGTAATATGAGAAAGTGGAAATGACA 58.962 33.333 0.00 0.00 0.00 3.58
532 533 8.420374 TCGTAATATGAGAAAGTGGAAATGAC 57.580 34.615 0.00 0.00 0.00 3.06
533 534 9.443323 TTTCGTAATATGAGAAAGTGGAAATGA 57.557 29.630 0.00 0.00 31.25 2.57
538 539 9.443323 TCATTTTTCGTAATATGAGAAAGTGGA 57.557 29.630 4.28 1.02 35.62 4.02
539 540 9.490663 GTCATTTTTCGTAATATGAGAAAGTGG 57.509 33.333 7.88 0.00 34.00 4.00
540 541 9.199184 CGTCATTTTTCGTAATATGAGAAAGTG 57.801 33.333 7.88 5.76 34.00 3.16
541 542 7.903431 GCGTCATTTTTCGTAATATGAGAAAGT 59.097 33.333 7.88 0.00 34.00 2.66
542 543 7.902917 TGCGTCATTTTTCGTAATATGAGAAAG 59.097 33.333 7.88 3.31 34.00 2.62
543 544 7.744059 TGCGTCATTTTTCGTAATATGAGAAA 58.256 30.769 7.88 1.46 34.00 2.52
544 545 7.297229 TGCGTCATTTTTCGTAATATGAGAA 57.703 32.000 7.88 0.00 34.00 2.87
545 546 6.895607 TGCGTCATTTTTCGTAATATGAGA 57.104 33.333 7.88 0.00 34.00 3.27
546 547 7.356719 GCAATGCGTCATTTTTCGTAATATGAG 60.357 37.037 7.88 4.96 34.00 2.90
547 548 6.413526 GCAATGCGTCATTTTTCGTAATATGA 59.586 34.615 4.28 4.28 31.05 2.15
548 549 6.196168 TGCAATGCGTCATTTTTCGTAATATG 59.804 34.615 0.00 0.00 31.05 1.78
549 550 6.261859 TGCAATGCGTCATTTTTCGTAATAT 58.738 32.000 0.00 0.00 31.05 1.28
550 551 5.631992 TGCAATGCGTCATTTTTCGTAATA 58.368 33.333 0.00 0.00 31.05 0.98
551 552 4.480541 TGCAATGCGTCATTTTTCGTAAT 58.519 34.783 0.00 0.00 31.05 1.89
552 553 3.890128 TGCAATGCGTCATTTTTCGTAA 58.110 36.364 0.00 0.00 31.05 3.18
553 554 3.544356 TGCAATGCGTCATTTTTCGTA 57.456 38.095 0.00 0.00 31.05 3.43
554 555 2.414058 TGCAATGCGTCATTTTTCGT 57.586 40.000 0.00 0.00 31.05 3.85
555 556 3.278081 CATGCAATGCGTCATTTTTCG 57.722 42.857 0.00 0.00 37.62 3.46
568 569 1.154169 CAAGTGACGCGCATGCAAT 60.154 52.632 19.57 1.10 42.97 3.56
569 570 2.251963 CAAGTGACGCGCATGCAA 59.748 55.556 19.57 0.00 42.97 4.08
570 571 2.953605 GACAAGTGACGCGCATGCA 61.954 57.895 19.57 0.00 42.97 3.96
571 572 2.202222 GACAAGTGACGCGCATGC 60.202 61.111 5.73 7.91 37.91 4.06
572 573 1.154599 GTGACAAGTGACGCGCATG 60.155 57.895 5.73 4.32 0.00 4.06
573 574 1.157257 TTGTGACAAGTGACGCGCAT 61.157 50.000 5.73 0.00 0.00 4.73
574 575 1.811679 TTGTGACAAGTGACGCGCA 60.812 52.632 5.73 1.71 0.00 6.09
575 576 1.367665 GTTGTGACAAGTGACGCGC 60.368 57.895 5.73 0.00 0.00 6.86
576 577 0.581529 ATGTTGTGACAAGTGACGCG 59.418 50.000 3.53 3.53 39.66 6.01
577 578 1.330521 ACATGTTGTGACAAGTGACGC 59.669 47.619 15.02 0.00 39.66 5.19
578 579 4.787381 TTACATGTTGTGACAAGTGACG 57.213 40.909 15.02 0.00 38.12 4.35
579 580 5.741982 GGTTTTACATGTTGTGACAAGTGAC 59.258 40.000 15.02 0.00 38.12 3.67
580 581 5.650266 AGGTTTTACATGTTGTGACAAGTGA 59.350 36.000 15.02 0.00 38.12 3.41
581 582 5.890334 AGGTTTTACATGTTGTGACAAGTG 58.110 37.500 2.30 3.64 38.12 3.16
582 583 6.038936 GGTAGGTTTTACATGTTGTGACAAGT 59.961 38.462 2.30 0.00 40.48 3.16
583 584 6.435428 GGTAGGTTTTACATGTTGTGACAAG 58.565 40.000 2.30 0.00 39.66 3.16
584 585 5.007823 CGGTAGGTTTTACATGTTGTGACAA 59.992 40.000 2.30 0.00 39.66 3.18
585 586 4.512198 CGGTAGGTTTTACATGTTGTGACA 59.488 41.667 2.30 0.00 40.71 3.58
586 587 4.612033 GCGGTAGGTTTTACATGTTGTGAC 60.612 45.833 2.30 0.00 0.00 3.67
587 588 3.499157 GCGGTAGGTTTTACATGTTGTGA 59.501 43.478 2.30 0.00 0.00 3.58
588 589 3.365565 GGCGGTAGGTTTTACATGTTGTG 60.366 47.826 2.30 0.00 0.00 3.33
589 590 2.815503 GGCGGTAGGTTTTACATGTTGT 59.184 45.455 2.30 0.00 0.00 3.32
590 591 2.814919 TGGCGGTAGGTTTTACATGTTG 59.185 45.455 2.30 0.00 0.00 3.33
591 592 3.143211 TGGCGGTAGGTTTTACATGTT 57.857 42.857 2.30 0.00 0.00 2.71
592 593 2.863132 TGGCGGTAGGTTTTACATGT 57.137 45.000 2.69 2.69 0.00 3.21
593 594 3.078837 ACTTGGCGGTAGGTTTTACATG 58.921 45.455 0.00 0.00 0.00 3.21
594 595 3.078837 CACTTGGCGGTAGGTTTTACAT 58.921 45.455 0.00 0.00 0.00 2.29
595 596 2.104451 TCACTTGGCGGTAGGTTTTACA 59.896 45.455 0.00 0.00 0.00 2.41
596 597 2.481568 GTCACTTGGCGGTAGGTTTTAC 59.518 50.000 0.00 0.00 0.00 2.01
597 598 2.769893 GTCACTTGGCGGTAGGTTTTA 58.230 47.619 0.00 0.00 0.00 1.52
598 599 1.601166 GTCACTTGGCGGTAGGTTTT 58.399 50.000 0.00 0.00 0.00 2.43
599 600 0.601841 CGTCACTTGGCGGTAGGTTT 60.602 55.000 0.00 0.00 39.84 3.27
600 601 1.005394 CGTCACTTGGCGGTAGGTT 60.005 57.895 0.00 0.00 39.84 3.50
601 602 2.654877 CGTCACTTGGCGGTAGGT 59.345 61.111 0.00 0.00 39.84 3.08
650 651 3.579151 AGAAGTACTTCTCGGAAAGCCTT 59.421 43.478 28.73 6.09 46.13 4.35
663 664 9.998106 TTGAGAGCAACTAATTAAGAAGTACTT 57.002 29.630 8.13 8.13 42.04 2.24
700 702 3.326747 GCGACGGCTAATCCTATTTCAT 58.673 45.455 0.00 0.00 35.83 2.57
722 724 1.735018 TCCCGCGACATAATTGTTGTG 59.265 47.619 8.23 0.85 44.21 3.33
726 728 1.651987 CACTCCCGCGACATAATTGT 58.348 50.000 8.23 0.00 39.32 2.71
732 734 2.589157 TTTCCCACTCCCGCGACAT 61.589 57.895 8.23 0.00 0.00 3.06
733 735 3.235481 TTTCCCACTCCCGCGACA 61.235 61.111 8.23 0.00 0.00 4.35
734 736 2.741211 GTTTCCCACTCCCGCGAC 60.741 66.667 8.23 0.00 0.00 5.19
735 737 4.367023 CGTTTCCCACTCCCGCGA 62.367 66.667 8.23 0.00 0.00 5.87
752 754 3.844577 ACATCAGCATTCTCTTTGTGC 57.155 42.857 0.00 0.00 39.10 4.57
846 848 5.739647 GCGATCAGTCTAGTCCTAGTGTAGA 60.740 48.000 1.49 0.00 34.84 2.59
847 849 4.449743 GCGATCAGTCTAGTCCTAGTGTAG 59.550 50.000 1.49 0.00 34.84 2.74
850 852 2.550606 GGCGATCAGTCTAGTCCTAGTG 59.449 54.545 1.49 0.00 34.84 2.74
872 874 3.445987 AGGGTTTAGACTTCAGGAGGAG 58.554 50.000 0.00 0.00 0.00 3.69
943 945 1.588082 GTACTCCTTGGTTCGGCGA 59.412 57.895 4.99 4.99 0.00 5.54
1126 1128 7.886338 AGAATTTTAGAACCATTTCCTGTGTC 58.114 34.615 0.00 0.00 31.28 3.67
1172 1174 1.203376 TCCCTCCCACATACACCTGAA 60.203 52.381 0.00 0.00 0.00 3.02
1176 1178 1.417890 CATCTCCCTCCCACATACACC 59.582 57.143 0.00 0.00 0.00 4.16
1215 1217 7.495934 CACATTTATACAGTAAGACTTCCAGGG 59.504 40.741 0.00 0.00 0.00 4.45
1216 1218 7.011482 GCACATTTATACAGTAAGACTTCCAGG 59.989 40.741 0.00 0.00 0.00 4.45
1326 1346 7.394872 GCATTACATAAGAAACAGAGAAGTCG 58.605 38.462 0.00 0.00 0.00 4.18
1348 1373 2.357009 GTCTGCTCATTCGAATTGGCAT 59.643 45.455 25.21 0.00 0.00 4.40
1358 1383 5.064452 CAGAGTACCAATTGTCTGCTCATTC 59.936 44.000 16.01 0.14 30.64 2.67
1374 1399 2.498167 CATAATGCTGCCCAGAGTACC 58.502 52.381 0.00 0.00 0.00 3.34
1426 1451 3.574284 TTGATTGCCTGAAATGAACCG 57.426 42.857 0.00 0.00 0.00 4.44
1551 1576 7.385752 ACAAATGAACAGGAACATAGCAATTTG 59.614 33.333 0.00 0.00 0.00 2.32
1556 1581 6.403866 AAACAAATGAACAGGAACATAGCA 57.596 33.333 0.00 0.00 0.00 3.49
1559 1584 6.419413 GCGAAAAACAAATGAACAGGAACATA 59.581 34.615 0.00 0.00 0.00 2.29
1592 1617 3.670991 GCATATAGCAGAACTACAGCGTC 59.329 47.826 0.00 0.00 44.79 5.19
1917 1974 9.881773 AATAATATGGTCAATCCCTTGTAACAT 57.118 29.630 0.00 0.00 33.87 2.71
2031 2088 9.965824 AAGAAACTAGAAATAACCAAACACATG 57.034 29.630 0.00 0.00 0.00 3.21
2113 2170 6.757897 TTTAATGGACCTTGTAGCAATCTG 57.242 37.500 0.00 0.00 0.00 2.90
2316 2373 1.707427 AGGCTTGATCCTTCAGTTGGT 59.293 47.619 0.00 0.00 30.82 3.67
2429 2486 5.531634 TGCACATGGAAAAGAATCAAGAAC 58.468 37.500 0.00 0.00 0.00 3.01
2926 2986 9.739276 CCCTAAGCCATAATTGTAGATATTTGA 57.261 33.333 0.00 0.00 0.00 2.69
2948 3008 7.319052 TGTCTTTGGAACTAATAACACCCTA 57.681 36.000 0.00 0.00 0.00 3.53
2958 3018 4.462483 GCCCATGAATGTCTTTGGAACTAA 59.538 41.667 0.00 0.00 0.00 2.24
2976 3036 3.004126 TCCTATCACATAAGGGCCCAT 57.996 47.619 27.56 16.50 0.00 4.00
3133 3197 2.223340 CCGGCAAAAGATCAGTGCATAC 60.223 50.000 14.74 0.74 40.12 2.39
3251 3315 8.134202 TCCTGTATGTGAATGTAAGAAAGAGA 57.866 34.615 0.00 0.00 0.00 3.10
3630 3694 9.692749 GTTCCGTCATATCTTGTGATAAGATAA 57.307 33.333 14.28 0.00 41.13 1.75
3891 3955 5.566429 GCAGATCATGACATTAGGAGTCGAT 60.566 44.000 0.00 0.00 38.83 3.59
3990 4054 3.826729 AGCCAAACCTCTTCATTGTAACC 59.173 43.478 0.00 0.00 0.00 2.85
4192 4279 2.159382 CAAAACATTACAGGCGGGTCT 58.841 47.619 0.00 0.00 0.00 3.85
4216 4303 3.837355 AGAAAGAGCCACAGGAACATTT 58.163 40.909 0.00 0.00 0.00 2.32
4223 4310 3.415212 TGATGAAAGAAAGAGCCACAGG 58.585 45.455 0.00 0.00 0.00 4.00
4305 4427 2.415512 GCGGTGGAAGACTGAAACATAC 59.584 50.000 0.00 0.00 31.77 2.39
4306 4428 2.037902 TGCGGTGGAAGACTGAAACATA 59.962 45.455 0.00 0.00 31.77 2.29
4307 4429 1.202758 TGCGGTGGAAGACTGAAACAT 60.203 47.619 0.00 0.00 31.77 2.71
4309 4431 1.523758 ATGCGGTGGAAGACTGAAAC 58.476 50.000 0.00 0.00 31.77 2.78
4310 4432 2.354704 CCTATGCGGTGGAAGACTGAAA 60.355 50.000 0.00 0.00 31.77 2.69
4311 4433 1.207089 CCTATGCGGTGGAAGACTGAA 59.793 52.381 0.00 0.00 31.77 3.02
4312 4434 0.824109 CCTATGCGGTGGAAGACTGA 59.176 55.000 0.00 0.00 31.77 3.41
4313 4435 0.537188 ACCTATGCGGTGGAAGACTG 59.463 55.000 0.00 0.00 46.80 3.51
4314 4436 2.032620 CTACCTATGCGGTGGAAGACT 58.967 52.381 0.00 0.00 46.55 3.24
4315 4437 1.755380 ACTACCTATGCGGTGGAAGAC 59.245 52.381 6.41 0.00 46.55 3.01
4316 4438 1.754803 CACTACCTATGCGGTGGAAGA 59.245 52.381 6.41 0.00 46.55 2.87
4317 4439 1.480954 ACACTACCTATGCGGTGGAAG 59.519 52.381 6.41 2.26 46.55 3.46
4318 4440 1.479323 GACACTACCTATGCGGTGGAA 59.521 52.381 6.41 0.00 46.55 3.53
4319 4441 1.108776 GACACTACCTATGCGGTGGA 58.891 55.000 6.41 0.00 46.55 4.02
4400 4523 6.798427 AATACAGATACTGCCTCAGAGAAA 57.202 37.500 0.00 0.00 34.37 2.52
4403 4526 6.435591 TGGATAATACAGATACTGCCTCAGAG 59.564 42.308 0.29 0.00 34.37 3.35
4405 4528 6.596309 TGGATAATACAGATACTGCCTCAG 57.404 41.667 0.00 0.00 34.37 3.35
4411 4534 6.531503 ACGGGATGGATAATACAGATACTG 57.468 41.667 0.00 0.00 37.52 2.74
4480 4607 4.971830 CGAAAGCAAATACGTATCGGACTA 59.028 41.667 8.86 0.00 0.00 2.59
4484 4611 3.499072 CCGAAAGCAAATACGTATCGG 57.501 47.619 14.89 14.89 41.81 4.18
4491 4618 8.743099 GCTTGTTAATATTCCGAAAGCAAATAC 58.257 33.333 15.03 0.00 38.67 1.89
4509 4636 6.072508 GCTAGCAATATGGCATAGCTTGTTAA 60.073 38.462 21.71 7.11 37.45 2.01
4598 4728 7.186804 AGAATGTAAGACGTTTTTGACACAAG 58.813 34.615 0.00 0.00 0.00 3.16
4599 4729 7.079182 AGAATGTAAGACGTTTTTGACACAA 57.921 32.000 0.00 0.00 0.00 3.33
4606 4740 7.787725 ACTCTCAAGAATGTAAGACGTTTTT 57.212 32.000 0.00 0.00 0.00 1.94
4626 4785 6.784031 AGATTACTCAACCAATTGGAACTCT 58.216 36.000 31.22 15.68 38.94 3.24
4683 4842 1.873591 GTGAAACGTGGAGCACTCAAT 59.126 47.619 0.00 0.00 31.34 2.57
4819 4986 1.199327 ACGATACAGTCTGTCCACACG 59.801 52.381 9.26 11.23 0.00 4.49
4824 4991 3.276857 TCCAGTACGATACAGTCTGTCC 58.723 50.000 9.26 2.03 0.00 4.02
4931 5098 4.190370 TCTAGGGATGAGATGAGCAAGA 57.810 45.455 0.00 0.00 0.00 3.02
4932 5099 4.588106 TCTTCTAGGGATGAGATGAGCAAG 59.412 45.833 0.00 0.00 0.00 4.01
4933 5100 4.343526 GTCTTCTAGGGATGAGATGAGCAA 59.656 45.833 0.00 0.00 30.27 3.91
4934 5101 3.894427 GTCTTCTAGGGATGAGATGAGCA 59.106 47.826 0.00 0.00 30.27 4.26
4935 5102 3.894427 TGTCTTCTAGGGATGAGATGAGC 59.106 47.826 0.00 0.00 30.27 4.26
5028 5202 1.073923 ACCAAAGAAGGTCCGCAAGAT 59.926 47.619 0.00 0.00 37.28 2.40
5035 5209 8.214364 AGAATATGATCTTACCAAAGAAGGTCC 58.786 37.037 0.00 0.00 44.75 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.