Multiple sequence alignment - TraesCS6A01G219800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G219800 chr6A 100.000 5680 0 0 1 5680 408030115 408035794 0.000000e+00 10490
1 TraesCS6A01G219800 chr6A 98.119 319 6 0 1 319 52820379 52820061 1.790000e-154 556
2 TraesCS6A01G219800 chr6D 96.453 2227 42 11 2965 5154 286627020 286629246 0.000000e+00 3640
3 TraesCS6A01G219800 chr6D 95.949 2123 55 5 808 2921 286624907 286627007 0.000000e+00 3415
4 TraesCS6A01G219800 chr6D 95.467 353 10 5 5311 5657 286629242 286629594 4.970000e-155 558
5 TraesCS6A01G219800 chr6D 83.429 350 46 9 318 662 71012340 71012682 1.190000e-81 315
6 TraesCS6A01G219800 chr6D 83.180 327 31 8 329 653 467186198 467186502 1.560000e-70 278
7 TraesCS6A01G219800 chr6B 97.632 1858 35 2 2965 4813 447111757 447113614 0.000000e+00 3179
8 TraesCS6A01G219800 chr6B 96.844 1901 51 2 808 2707 447109540 447111432 0.000000e+00 3169
9 TraesCS6A01G219800 chr6B 95.000 340 13 3 5312 5647 447114097 447114436 1.080000e-146 531
10 TraesCS6A01G219800 chr6B 96.698 212 6 1 2711 2921 447111533 447111744 9.050000e-93 351
11 TraesCS6A01G219800 chr6B 82.857 350 50 8 318 662 145550117 145550461 7.150000e-79 305
12 TraesCS6A01G219800 chr6B 93.583 187 9 3 5131 5315 718313653 718313838 5.610000e-70 276
13 TraesCS6A01G219800 chr6B 93.158 190 4 5 4974 5154 447113907 447114096 2.610000e-68 270
14 TraesCS6A01G219800 chr6B 85.165 182 9 3 4812 4975 447113683 447113864 2.720000e-38 171
15 TraesCS6A01G219800 chr6B 97.368 76 2 0 1480 1555 447111437 447111512 4.620000e-26 130
16 TraesCS6A01G219800 chr5A 93.701 508 23 4 318 816 470763045 470762538 0.000000e+00 752
17 TraesCS6A01G219800 chr4A 93.281 506 22 6 318 814 584420559 584421061 0.000000e+00 736
18 TraesCS6A01G219800 chr4A 98.428 318 5 0 1 318 448432502 448432185 1.380000e-155 560
19 TraesCS6A01G219800 chr4A 94.444 180 8 2 5138 5315 466938263 466938084 5.610000e-70 276
20 TraesCS6A01G219800 chr4A 93.855 179 9 2 5138 5314 559949228 559949050 9.380000e-68 268
21 TraesCS6A01G219800 chr1A 92.505 507 29 6 318 815 577989176 577989682 0.000000e+00 717
22 TraesCS6A01G219800 chr1A 98.428 318 5 0 1 318 589142456 589142139 1.380000e-155 560
23 TraesCS6A01G219800 chr1A 92.593 189 9 4 5133 5316 322177172 322177360 3.370000e-67 267
24 TraesCS6A01G219800 chrUn 92.644 435 24 2 318 746 250907085 250906653 2.250000e-173 619
25 TraesCS6A01G219800 chrUn 92.644 435 24 2 318 746 283168604 283169036 2.250000e-173 619
26 TraesCS6A01G219800 chrUn 98.750 320 3 1 1 319 412534046 412533727 8.260000e-158 568
27 TraesCS6A01G219800 chr2A 98.746 319 4 0 1 319 772874203 772873885 8.260000e-158 568
28 TraesCS6A01G219800 chr2A 98.438 320 4 1 1 319 39384343 39384662 3.840000e-156 562
29 TraesCS6A01G219800 chr2A 98.433 319 5 0 1 319 772703104 772702786 3.840000e-156 562
30 TraesCS6A01G219800 chr2A 97.554 327 7 1 1 327 722585188 722584863 4.970000e-155 558
31 TraesCS6A01G219800 chr2A 98.125 320 6 0 1 320 772867219 772866900 4.970000e-155 558
32 TraesCS6A01G219800 chr2A 93.956 182 8 3 5141 5319 48661399 48661580 7.250000e-69 272
33 TraesCS6A01G219800 chr3A 96.491 171 5 1 5145 5314 677843618 677843448 1.200000e-71 281
34 TraesCS6A01G219800 chr3A 94.915 177 8 1 5147 5322 1759696 1759872 5.610000e-70 276
35 TraesCS6A01G219800 chr5D 94.413 179 8 2 5142 5318 66671959 66671781 2.020000e-69 274
36 TraesCS6A01G219800 chr7A 93.855 179 9 2 5152 5328 630046166 630046344 9.380000e-68 268
37 TraesCS6A01G219800 chr3D 80.162 247 25 8 318 562 4192100 4192324 4.550000e-36 163


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G219800 chr6A 408030115 408035794 5679 False 10490.000000 10490 100.000000 1 5680 1 chr6A.!!$F1 5679
1 TraesCS6A01G219800 chr6D 286624907 286629594 4687 False 2537.666667 3640 95.956333 808 5657 3 chr6D.!!$F3 4849
2 TraesCS6A01G219800 chr6B 447109540 447114436 4896 False 1114.428571 3179 94.552143 808 5647 7 chr6B.!!$F3 4839
3 TraesCS6A01G219800 chr5A 470762538 470763045 507 True 752.000000 752 93.701000 318 816 1 chr5A.!!$R1 498
4 TraesCS6A01G219800 chr4A 584420559 584421061 502 False 736.000000 736 93.281000 318 814 1 chr4A.!!$F1 496
5 TraesCS6A01G219800 chr1A 577989176 577989682 506 False 717.000000 717 92.505000 318 815 1 chr1A.!!$F2 497

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
175 176 0.028637 GTCGGATCGGGAAGACGTAC 59.971 60.000 0.00 0.00 34.94 3.67 F
252 253 0.178958 ACAACACTCTCCCCTCTCGT 60.179 55.000 0.00 0.00 0.00 4.18 F
264 265 0.671472 CCTCTCGTTGCTGTGCATCA 60.671 55.000 0.00 0.00 38.76 3.07 F
267 268 1.081094 CTCGTTGCTGTGCATCATCA 58.919 50.000 0.00 0.00 38.76 3.07 F
805 821 1.125566 CGCTTCGGAGGTAAACGTTTC 59.874 52.381 18.42 9.19 0.00 2.78 F
806 822 1.462283 GCTTCGGAGGTAAACGTTTCC 59.538 52.381 18.42 17.46 0.00 3.13 F
879 895 1.549950 ACAATGAATTTGGCCGGAGGT 60.550 47.619 5.05 0.00 44.48 3.85 F
2753 2875 0.874390 CAACAGTGGGTCCATCAACG 59.126 55.000 0.00 0.00 0.00 4.10 F
2921 3043 2.167281 TGGCAAGTGCAAGTGCTTTTAA 59.833 40.909 19.18 2.20 44.36 1.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1238 1254 0.400213 TCCAAATCAGTGCTCGGGTT 59.600 50.000 0.00 0.00 0.00 4.11 R
1585 1601 4.201679 CCGCGGATGCCTACGTCA 62.202 66.667 24.07 0.00 38.08 4.35 R
2132 2148 8.764524 AAGCTACAAACACACTATAGAAGAAG 57.235 34.615 6.78 0.74 0.00 2.85 R
2328 2345 4.543692 CAAGGAGCAGAACAATTTGTCTG 58.456 43.478 17.45 17.45 32.51 3.51 R
2389 2406 1.000955 AGTCCACAAACTAGCCACTCG 59.999 52.381 0.00 0.00 0.00 4.18 R
2753 2875 1.072331 TGGGAACAGAAGGAGAGTTGC 59.928 52.381 0.00 0.00 35.01 4.17 R
2907 3029 5.528043 TCAATCCTTTAAAAGCACTTGCA 57.472 34.783 3.62 0.00 45.16 4.08 R
4583 4714 1.012086 CAGAATCAGTGGCATGACCG 58.988 55.000 0.00 0.00 43.94 4.79 R
4986 5250 0.977395 CTCTTCCAAACGAGAGGGGT 59.023 55.000 0.00 0.00 36.58 4.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.124351 CGAAGCCCTGCGACGGTA 62.124 66.667 0.00 0.00 0.00 4.02
18 19 2.202756 GAAGCCCTGCGACGGTAG 60.203 66.667 0.00 0.00 0.00 3.18
19 20 2.678934 AAGCCCTGCGACGGTAGA 60.679 61.111 0.00 0.00 0.00 2.59
20 21 2.221906 GAAGCCCTGCGACGGTAGAA 62.222 60.000 0.00 0.00 0.00 2.10
21 22 2.502692 AAGCCCTGCGACGGTAGAAC 62.503 60.000 0.00 0.00 0.00 3.01
22 23 2.967397 CCCTGCGACGGTAGAACA 59.033 61.111 0.00 0.00 0.00 3.18
23 24 1.515954 CCCTGCGACGGTAGAACAT 59.484 57.895 0.00 0.00 0.00 2.71
24 25 0.527817 CCCTGCGACGGTAGAACATC 60.528 60.000 0.00 0.00 0.00 3.06
25 26 0.172578 CCTGCGACGGTAGAACATCA 59.827 55.000 0.00 0.00 0.00 3.07
26 27 1.403647 CCTGCGACGGTAGAACATCAA 60.404 52.381 0.00 0.00 0.00 2.57
27 28 1.920574 CTGCGACGGTAGAACATCAAG 59.079 52.381 0.00 0.00 0.00 3.02
28 29 1.542472 TGCGACGGTAGAACATCAAGA 59.458 47.619 0.00 0.00 0.00 3.02
29 30 2.165641 TGCGACGGTAGAACATCAAGAT 59.834 45.455 0.00 0.00 0.00 2.40
30 31 2.789893 GCGACGGTAGAACATCAAGATC 59.210 50.000 0.00 0.00 0.00 2.75
31 32 3.036633 CGACGGTAGAACATCAAGATCG 58.963 50.000 0.00 0.00 0.00 3.69
32 33 3.487042 CGACGGTAGAACATCAAGATCGT 60.487 47.826 0.00 0.00 0.00 3.73
33 34 4.030134 ACGGTAGAACATCAAGATCGTC 57.970 45.455 0.00 0.00 0.00 4.20
34 35 3.442625 ACGGTAGAACATCAAGATCGTCA 59.557 43.478 0.00 0.00 0.00 4.35
35 36 3.791887 CGGTAGAACATCAAGATCGTCAC 59.208 47.826 0.00 0.00 0.00 3.67
36 37 4.113354 GGTAGAACATCAAGATCGTCACC 58.887 47.826 0.00 0.00 0.00 4.02
37 38 3.961480 AGAACATCAAGATCGTCACCA 57.039 42.857 0.00 0.00 0.00 4.17
38 39 3.589988 AGAACATCAAGATCGTCACCAC 58.410 45.455 0.00 0.00 0.00 4.16
40 41 0.647410 CATCAAGATCGTCACCACGC 59.353 55.000 0.00 0.00 46.28 5.34
41 42 0.460284 ATCAAGATCGTCACCACGCC 60.460 55.000 0.00 0.00 46.28 5.68
42 43 2.126071 AAGATCGTCACCACGCCG 60.126 61.111 0.00 0.00 46.28 6.46
43 44 2.927580 AAGATCGTCACCACGCCGT 61.928 57.895 0.00 0.00 46.28 5.68
44 45 2.814183 AAGATCGTCACCACGCCGTC 62.814 60.000 0.00 0.00 46.28 4.79
45 46 4.771356 ATCGTCACCACGCCGTCG 62.771 66.667 0.00 0.00 46.28 5.12
59 60 3.843985 GTCGTGCTGACGGAACTC 58.156 61.111 0.00 0.00 46.11 3.01
60 61 1.733399 GTCGTGCTGACGGAACTCC 60.733 63.158 0.00 0.00 46.11 3.85
61 62 1.901948 TCGTGCTGACGGAACTCCT 60.902 57.895 0.00 0.00 46.11 3.69
62 63 1.444553 CGTGCTGACGGAACTCCTC 60.445 63.158 0.00 0.00 42.18 3.71
63 64 1.079750 GTGCTGACGGAACTCCTCC 60.080 63.158 0.00 0.00 41.40 4.30
64 65 2.283529 TGCTGACGGAACTCCTCCC 61.284 63.158 0.00 0.00 41.87 4.30
65 66 3.020237 GCTGACGGAACTCCTCCCC 62.020 68.421 0.00 0.00 41.87 4.81
67 68 2.362120 GACGGAACTCCTCCCCGA 60.362 66.667 7.06 0.00 45.58 5.14
68 69 2.679287 ACGGAACTCCTCCCCGAC 60.679 66.667 7.06 0.00 45.58 4.79
69 70 3.823330 CGGAACTCCTCCCCGACG 61.823 72.222 0.00 0.00 45.58 5.12
70 71 4.144703 GGAACTCCTCCCCGACGC 62.145 72.222 0.00 0.00 38.44 5.19
71 72 3.069318 GAACTCCTCCCCGACGCT 61.069 66.667 0.00 0.00 0.00 5.07
72 73 2.603776 AACTCCTCCCCGACGCTT 60.604 61.111 0.00 0.00 0.00 4.68
73 74 2.168666 GAACTCCTCCCCGACGCTTT 62.169 60.000 0.00 0.00 0.00 3.51
74 75 2.125512 CTCCTCCCCGACGCTTTG 60.126 66.667 0.00 0.00 0.00 2.77
75 76 4.388499 TCCTCCCCGACGCTTTGC 62.388 66.667 0.00 0.00 0.00 3.68
76 77 4.394712 CCTCCCCGACGCTTTGCT 62.395 66.667 0.00 0.00 0.00 3.91
77 78 3.121030 CTCCCCGACGCTTTGCTG 61.121 66.667 0.00 0.00 0.00 4.41
78 79 4.697756 TCCCCGACGCTTTGCTGG 62.698 66.667 0.00 0.00 0.00 4.85
79 80 4.697756 CCCCGACGCTTTGCTGGA 62.698 66.667 0.00 0.00 0.00 3.86
80 81 2.436646 CCCGACGCTTTGCTGGAT 60.437 61.111 0.00 0.00 0.00 3.41
81 82 2.464459 CCCGACGCTTTGCTGGATC 61.464 63.158 0.00 0.00 0.00 3.36
82 83 2.697425 CGACGCTTTGCTGGATCG 59.303 61.111 0.00 0.00 0.00 3.69
83 84 2.802667 CGACGCTTTGCTGGATCGG 61.803 63.158 0.00 0.00 0.00 4.18
84 85 1.447838 GACGCTTTGCTGGATCGGA 60.448 57.895 0.00 0.00 0.00 4.55
85 86 1.424493 GACGCTTTGCTGGATCGGAG 61.424 60.000 0.00 0.00 0.00 4.63
86 87 2.817423 CGCTTTGCTGGATCGGAGC 61.817 63.158 8.14 8.14 36.95 4.70
87 88 2.476320 GCTTTGCTGGATCGGAGCC 61.476 63.158 5.08 5.08 35.43 4.70
88 89 1.821332 CTTTGCTGGATCGGAGCCC 60.821 63.158 10.23 0.92 35.43 5.19
98 99 4.547367 CGGAGCCCGGGGATTGTC 62.547 72.222 25.28 3.55 44.15 3.18
99 100 3.407967 GGAGCCCGGGGATTGTCA 61.408 66.667 25.28 0.00 0.00 3.58
100 101 2.757124 GGAGCCCGGGGATTGTCAT 61.757 63.158 25.28 0.00 0.00 3.06
101 102 1.227973 GAGCCCGGGGATTGTCATC 60.228 63.158 25.28 0.89 0.00 2.92
102 103 2.591715 GCCCGGGGATTGTCATCG 60.592 66.667 25.28 0.00 0.00 3.84
103 104 3.101796 GCCCGGGGATTGTCATCGA 62.102 63.158 25.28 0.00 0.00 3.59
104 105 1.069765 CCCGGGGATTGTCATCGAG 59.930 63.158 14.71 0.00 0.00 4.04
105 106 1.686325 CCCGGGGATTGTCATCGAGT 61.686 60.000 14.71 0.00 0.00 4.18
106 107 0.178068 CCGGGGATTGTCATCGAGTT 59.822 55.000 0.00 0.00 0.00 3.01
107 108 1.290203 CGGGGATTGTCATCGAGTTG 58.710 55.000 0.00 0.00 0.00 3.16
108 109 1.405526 CGGGGATTGTCATCGAGTTGT 60.406 52.381 0.00 0.00 0.00 3.32
109 110 2.159156 CGGGGATTGTCATCGAGTTGTA 60.159 50.000 0.00 0.00 0.00 2.41
110 111 3.195661 GGGGATTGTCATCGAGTTGTAC 58.804 50.000 0.00 0.00 0.00 2.90
111 112 2.858344 GGGATTGTCATCGAGTTGTACG 59.142 50.000 0.00 0.00 0.00 3.67
112 113 3.508762 GGATTGTCATCGAGTTGTACGT 58.491 45.455 0.00 0.00 0.00 3.57
113 114 3.303495 GGATTGTCATCGAGTTGTACGTG 59.697 47.826 0.00 0.00 0.00 4.49
114 115 3.358707 TTGTCATCGAGTTGTACGTGT 57.641 42.857 0.00 0.00 0.00 4.49
115 116 2.657184 TGTCATCGAGTTGTACGTGTG 58.343 47.619 0.00 0.00 0.00 3.82
116 117 1.385743 GTCATCGAGTTGTACGTGTGC 59.614 52.381 0.00 0.00 0.00 4.57
117 118 1.268625 TCATCGAGTTGTACGTGTGCT 59.731 47.619 0.00 0.00 0.00 4.40
118 119 2.485038 TCATCGAGTTGTACGTGTGCTA 59.515 45.455 0.00 0.00 0.00 3.49
119 120 3.058085 TCATCGAGTTGTACGTGTGCTAA 60.058 43.478 0.00 0.00 0.00 3.09
120 121 2.924903 TCGAGTTGTACGTGTGCTAAG 58.075 47.619 0.00 0.00 0.00 2.18
121 122 2.549329 TCGAGTTGTACGTGTGCTAAGA 59.451 45.455 0.00 0.00 0.00 2.10
122 123 3.003585 TCGAGTTGTACGTGTGCTAAGAA 59.996 43.478 0.00 0.00 0.00 2.52
123 124 3.119136 CGAGTTGTACGTGTGCTAAGAAC 59.881 47.826 0.00 0.00 0.00 3.01
124 125 4.296690 GAGTTGTACGTGTGCTAAGAACT 58.703 43.478 0.00 0.00 0.00 3.01
125 126 4.296690 AGTTGTACGTGTGCTAAGAACTC 58.703 43.478 0.00 0.00 0.00 3.01
126 127 2.924903 TGTACGTGTGCTAAGAACTCG 58.075 47.619 0.00 3.13 39.65 4.18
127 128 2.248487 GTACGTGTGCTAAGAACTCGG 58.752 52.381 0.00 0.00 38.48 4.63
128 129 0.956633 ACGTGTGCTAAGAACTCGGA 59.043 50.000 8.61 0.00 38.48 4.55
129 130 1.068472 ACGTGTGCTAAGAACTCGGAG 60.068 52.381 2.83 2.83 38.48 4.63
130 131 1.732732 CGTGTGCTAAGAACTCGGAGG 60.733 57.143 10.23 0.00 32.48 4.30
131 132 1.272769 GTGTGCTAAGAACTCGGAGGT 59.727 52.381 10.23 1.51 0.00 3.85
132 133 1.272490 TGTGCTAAGAACTCGGAGGTG 59.728 52.381 10.23 0.00 0.00 4.00
133 134 0.246635 TGCTAAGAACTCGGAGGTGC 59.753 55.000 10.23 3.01 0.00 5.01
134 135 0.460459 GCTAAGAACTCGGAGGTGCC 60.460 60.000 10.23 0.00 0.00 5.01
143 144 2.183555 GGAGGTGCCGGAGTAACG 59.816 66.667 5.05 0.00 0.00 3.18
151 152 3.870606 CGGAGTAACGGTGCTTGG 58.129 61.111 0.00 0.00 0.00 3.61
152 153 1.290955 CGGAGTAACGGTGCTTGGA 59.709 57.895 0.00 0.00 0.00 3.53
153 154 0.108329 CGGAGTAACGGTGCTTGGAT 60.108 55.000 0.00 0.00 0.00 3.41
154 155 1.653151 GGAGTAACGGTGCTTGGATC 58.347 55.000 0.00 0.00 0.00 3.36
155 156 1.278238 GAGTAACGGTGCTTGGATCG 58.722 55.000 0.00 0.00 0.00 3.69
156 157 0.108329 AGTAACGGTGCTTGGATCGG 60.108 55.000 0.00 0.00 0.00 4.18
157 158 0.390735 GTAACGGTGCTTGGATCGGT 60.391 55.000 0.00 0.00 0.00 4.69
158 159 0.108520 TAACGGTGCTTGGATCGGTC 60.109 55.000 0.00 0.00 0.00 4.79
159 160 2.885644 CGGTGCTTGGATCGGTCG 60.886 66.667 0.00 0.00 0.00 4.79
160 161 2.511600 GGTGCTTGGATCGGTCGG 60.512 66.667 0.00 0.00 0.00 4.79
161 162 2.577059 GTGCTTGGATCGGTCGGA 59.423 61.111 0.00 0.00 0.00 4.55
162 163 1.144057 GTGCTTGGATCGGTCGGAT 59.856 57.895 0.00 0.00 38.35 4.18
168 169 3.440151 GATCGGTCGGATCGGGAA 58.560 61.111 11.21 0.00 42.02 3.97
169 170 1.286260 GATCGGTCGGATCGGGAAG 59.714 63.158 11.21 0.00 42.02 3.46
170 171 1.152819 ATCGGTCGGATCGGGAAGA 60.153 57.895 11.21 0.00 0.00 2.87
171 172 1.453762 ATCGGTCGGATCGGGAAGAC 61.454 60.000 11.21 0.00 0.00 3.01
172 173 2.412112 GGTCGGATCGGGAAGACG 59.588 66.667 0.00 0.00 34.68 4.18
173 174 2.413142 GGTCGGATCGGGAAGACGT 61.413 63.158 0.00 0.00 34.68 4.34
174 175 1.097547 GGTCGGATCGGGAAGACGTA 61.098 60.000 0.00 0.00 34.68 3.57
175 176 0.028637 GTCGGATCGGGAAGACGTAC 59.971 60.000 0.00 0.00 34.94 3.67
176 177 1.010350 CGGATCGGGAAGACGTACG 60.010 63.158 15.01 15.01 34.94 3.67
177 178 1.431488 CGGATCGGGAAGACGTACGA 61.431 60.000 24.41 0.00 39.85 3.43
178 179 0.028637 GGATCGGGAAGACGTACGAC 59.971 60.000 24.41 16.77 38.24 4.34
179 180 1.012841 GATCGGGAAGACGTACGACT 58.987 55.000 24.41 19.11 38.24 4.18
180 181 2.205074 GATCGGGAAGACGTACGACTA 58.795 52.381 24.41 5.92 38.24 2.59
181 182 1.359848 TCGGGAAGACGTACGACTAC 58.640 55.000 24.41 16.64 34.94 2.73
182 183 1.066858 TCGGGAAGACGTACGACTACT 60.067 52.381 24.41 6.98 34.94 2.57
183 184 1.734465 CGGGAAGACGTACGACTACTT 59.266 52.381 24.41 19.15 0.00 2.24
184 185 2.222908 CGGGAAGACGTACGACTACTTC 60.223 54.545 24.41 24.60 37.02 3.01
185 186 3.397405 GGAAGACGTACGACTACTTCC 57.603 52.381 29.95 29.95 45.83 3.46
187 188 4.257536 GAAGACGTACGACTACTTCCTC 57.742 50.000 24.41 10.47 33.28 3.71
188 189 3.608316 AGACGTACGACTACTTCCTCT 57.392 47.619 24.41 7.87 0.00 3.69
189 190 4.727507 AGACGTACGACTACTTCCTCTA 57.272 45.455 24.41 0.00 0.00 2.43
190 191 4.429108 AGACGTACGACTACTTCCTCTAC 58.571 47.826 24.41 0.00 0.00 2.59
191 192 3.182967 ACGTACGACTACTTCCTCTACG 58.817 50.000 24.41 0.00 33.44 3.51
192 193 3.182967 CGTACGACTACTTCCTCTACGT 58.817 50.000 10.44 0.00 36.52 3.57
193 194 3.614616 CGTACGACTACTTCCTCTACGTT 59.385 47.826 10.44 0.00 34.52 3.99
194 195 4.491602 CGTACGACTACTTCCTCTACGTTG 60.492 50.000 10.44 0.00 34.52 4.10
195 196 3.406764 ACGACTACTTCCTCTACGTTGT 58.593 45.455 0.00 0.00 0.00 3.32
196 197 3.188048 ACGACTACTTCCTCTACGTTGTG 59.812 47.826 0.00 0.00 0.00 3.33
197 198 3.188048 CGACTACTTCCTCTACGTTGTGT 59.812 47.826 0.00 0.00 0.00 3.72
198 199 4.668686 CGACTACTTCCTCTACGTTGTGTC 60.669 50.000 0.00 0.00 0.00 3.67
199 200 4.139786 ACTACTTCCTCTACGTTGTGTCA 58.860 43.478 0.00 0.00 0.00 3.58
200 201 4.581824 ACTACTTCCTCTACGTTGTGTCAA 59.418 41.667 0.00 0.00 0.00 3.18
201 202 3.714391 ACTTCCTCTACGTTGTGTCAAC 58.286 45.455 0.00 2.95 0.00 3.18
203 204 0.782384 CCTCTACGTTGTGTCAACGC 59.218 55.000 27.00 2.78 46.58 4.84
204 205 1.602165 CCTCTACGTTGTGTCAACGCT 60.602 52.381 27.00 18.77 46.58 5.07
205 206 2.124903 CTCTACGTTGTGTCAACGCTT 58.875 47.619 27.00 15.67 46.58 4.68
206 207 2.121786 TCTACGTTGTGTCAACGCTTC 58.878 47.619 27.00 0.00 46.58 3.86
207 208 1.191647 CTACGTTGTGTCAACGCTTCC 59.808 52.381 27.00 0.00 46.58 3.46
208 209 1.083657 CGTTGTGTCAACGCTTCCG 60.084 57.895 19.05 0.00 36.82 4.30
209 210 1.368850 GTTGTGTCAACGCTTCCGC 60.369 57.895 0.00 0.00 38.22 5.54
210 211 1.815840 TTGTGTCAACGCTTCCGCA 60.816 52.632 0.00 0.00 38.22 5.69
211 212 1.771073 TTGTGTCAACGCTTCCGCAG 61.771 55.000 0.00 0.00 38.22 5.18
212 213 2.108157 TGTCAACGCTTCCGCAGT 59.892 55.556 0.00 0.00 38.22 4.40
213 214 1.954146 TGTCAACGCTTCCGCAGTC 60.954 57.895 0.00 0.00 38.22 3.51
214 215 2.733218 TCAACGCTTCCGCAGTCG 60.733 61.111 0.00 0.00 38.22 4.18
226 227 3.991051 CAGTCGGTCTGCGTGGGT 61.991 66.667 0.00 0.00 37.36 4.51
227 228 2.282674 AGTCGGTCTGCGTGGGTA 60.283 61.111 0.00 0.00 0.00 3.69
228 229 2.126189 GTCGGTCTGCGTGGGTAC 60.126 66.667 0.00 0.00 0.00 3.34
239 240 1.689959 CGTGGGTACGTAGACAACAC 58.310 55.000 0.00 0.68 44.99 3.32
240 241 1.267806 CGTGGGTACGTAGACAACACT 59.732 52.381 0.00 0.00 44.99 3.55
241 242 2.666619 CGTGGGTACGTAGACAACACTC 60.667 54.545 0.00 0.00 44.99 3.51
242 243 2.555757 GTGGGTACGTAGACAACACTCT 59.444 50.000 0.00 0.00 0.00 3.24
243 244 2.816087 TGGGTACGTAGACAACACTCTC 59.184 50.000 0.00 0.00 0.00 3.20
244 245 2.163211 GGGTACGTAGACAACACTCTCC 59.837 54.545 0.00 0.00 0.00 3.71
245 246 2.163211 GGTACGTAGACAACACTCTCCC 59.837 54.545 0.00 0.00 0.00 4.30
246 247 1.254954 ACGTAGACAACACTCTCCCC 58.745 55.000 0.00 0.00 0.00 4.81
247 248 1.203025 ACGTAGACAACACTCTCCCCT 60.203 52.381 0.00 0.00 0.00 4.79
248 249 1.473278 CGTAGACAACACTCTCCCCTC 59.527 57.143 0.00 0.00 0.00 4.30
249 250 2.810164 GTAGACAACACTCTCCCCTCT 58.190 52.381 0.00 0.00 0.00 3.69
250 251 1.931635 AGACAACACTCTCCCCTCTC 58.068 55.000 0.00 0.00 0.00 3.20
251 252 0.528470 GACAACACTCTCCCCTCTCG 59.472 60.000 0.00 0.00 0.00 4.04
252 253 0.178958 ACAACACTCTCCCCTCTCGT 60.179 55.000 0.00 0.00 0.00 4.18
253 254 0.969894 CAACACTCTCCCCTCTCGTT 59.030 55.000 0.00 0.00 0.00 3.85
254 255 0.969894 AACACTCTCCCCTCTCGTTG 59.030 55.000 0.00 0.00 0.00 4.10
255 256 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
256 257 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
257 258 1.254284 ACTCTCCCCTCTCGTTGCTG 61.254 60.000 0.00 0.00 0.00 4.41
258 259 1.228894 TCTCCCCTCTCGTTGCTGT 60.229 57.895 0.00 0.00 0.00 4.40
259 260 1.079543 CTCCCCTCTCGTTGCTGTG 60.080 63.158 0.00 0.00 0.00 3.66
260 261 2.743928 CCCCTCTCGTTGCTGTGC 60.744 66.667 0.00 0.00 0.00 4.57
261 262 2.031012 CCCTCTCGTTGCTGTGCA 59.969 61.111 0.00 0.00 36.47 4.57
262 263 1.376424 CCCTCTCGTTGCTGTGCAT 60.376 57.895 0.00 0.00 38.76 3.96
263 264 1.364626 CCCTCTCGTTGCTGTGCATC 61.365 60.000 0.00 0.00 38.76 3.91
264 265 0.671472 CCTCTCGTTGCTGTGCATCA 60.671 55.000 0.00 0.00 38.76 3.07
265 266 1.366679 CTCTCGTTGCTGTGCATCAT 58.633 50.000 0.00 0.00 38.76 2.45
266 267 1.326852 CTCTCGTTGCTGTGCATCATC 59.673 52.381 0.00 0.00 38.76 2.92
267 268 1.081094 CTCGTTGCTGTGCATCATCA 58.919 50.000 0.00 0.00 38.76 3.07
268 269 1.669265 CTCGTTGCTGTGCATCATCAT 59.331 47.619 0.00 0.00 38.76 2.45
269 270 1.399089 TCGTTGCTGTGCATCATCATG 59.601 47.619 0.00 0.00 38.76 3.07
270 271 1.399089 CGTTGCTGTGCATCATCATGA 59.601 47.619 0.00 0.00 38.76 3.07
271 272 2.032924 CGTTGCTGTGCATCATCATGAT 59.967 45.455 1.18 1.18 38.76 2.45
272 273 3.629058 GTTGCTGTGCATCATCATGATC 58.371 45.455 4.86 0.00 38.76 2.92
273 274 3.208747 TGCTGTGCATCATCATGATCT 57.791 42.857 4.86 0.00 34.28 2.75
274 275 3.551846 TGCTGTGCATCATCATGATCTT 58.448 40.909 4.86 0.00 34.28 2.40
275 276 3.315191 TGCTGTGCATCATCATGATCTTG 59.685 43.478 4.86 7.58 34.28 3.02
276 277 3.853676 GCTGTGCATCATCATGATCTTGC 60.854 47.826 23.44 23.44 34.28 4.01
277 278 2.289547 TGTGCATCATCATGATCTTGCG 59.710 45.455 24.04 8.66 34.28 4.85
278 279 2.289820 GTGCATCATCATGATCTTGCGT 59.710 45.455 24.04 0.00 34.28 5.24
279 280 2.289547 TGCATCATCATGATCTTGCGTG 59.710 45.455 24.04 8.78 34.28 5.34
280 281 2.289820 GCATCATCATGATCTTGCGTGT 59.710 45.455 18.62 0.00 34.28 4.49
281 282 3.848554 GCATCATCATGATCTTGCGTGTG 60.849 47.826 18.62 2.90 34.28 3.82
282 283 1.667212 TCATCATGATCTTGCGTGTGC 59.333 47.619 4.86 0.00 43.20 4.57
283 284 5.130470 ATCATCATGATCTTGCGTGTGCG 62.130 47.826 4.86 0.00 36.70 5.34
294 295 2.325509 GCGTGTGCGTAGGAAAATTT 57.674 45.000 0.00 0.00 40.81 1.82
295 296 2.657184 GCGTGTGCGTAGGAAAATTTT 58.343 42.857 2.28 2.28 40.81 1.82
296 297 2.403698 GCGTGTGCGTAGGAAAATTTTG 59.596 45.455 8.47 0.00 40.81 2.44
297 298 3.850374 GCGTGTGCGTAGGAAAATTTTGA 60.850 43.478 8.47 0.00 40.81 2.69
298 299 4.283678 CGTGTGCGTAGGAAAATTTTGAA 58.716 39.130 8.47 0.00 0.00 2.69
299 300 4.735822 CGTGTGCGTAGGAAAATTTTGAAA 59.264 37.500 8.47 0.00 0.00 2.69
300 301 5.401079 CGTGTGCGTAGGAAAATTTTGAAAT 59.599 36.000 8.47 0.00 0.00 2.17
301 302 6.074569 CGTGTGCGTAGGAAAATTTTGAAATT 60.075 34.615 8.47 0.00 40.15 1.82
302 303 7.113684 CGTGTGCGTAGGAAAATTTTGAAATTA 59.886 33.333 8.47 0.00 37.62 1.40
303 304 8.211838 GTGTGCGTAGGAAAATTTTGAAATTAC 58.788 33.333 8.47 3.20 37.62 1.89
304 305 8.138712 TGTGCGTAGGAAAATTTTGAAATTACT 58.861 29.630 8.47 0.00 37.62 2.24
305 306 9.615295 GTGCGTAGGAAAATTTTGAAATTACTA 57.385 29.630 8.47 0.00 37.62 1.82
306 307 9.615295 TGCGTAGGAAAATTTTGAAATTACTAC 57.385 29.630 8.47 17.54 37.62 2.73
308 309 9.815936 CGTAGGAAAATTTTGAAATTACTACGT 57.184 29.630 27.13 0.00 44.84 3.57
311 312 9.687210 AGGAAAATTTTGAAATTACTACGTTCC 57.313 29.630 8.47 14.46 37.70 3.62
312 313 8.918658 GGAAAATTTTGAAATTACTACGTTCCC 58.081 33.333 8.47 0.00 37.62 3.97
313 314 8.821147 AAAATTTTGAAATTACTACGTTCCCC 57.179 30.769 1.75 0.00 37.62 4.81
314 315 7.527568 AATTTTGAAATTACTACGTTCCCCA 57.472 32.000 0.00 0.00 36.88 4.96
315 316 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
316 317 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
350 351 4.142622 TGAACGATTGCAGCTTTCTTATGG 60.143 41.667 0.00 0.00 0.00 2.74
368 369 6.535150 TCTTATGGACGATTGTAGCTTTTCAG 59.465 38.462 0.00 0.00 0.00 3.02
403 404 3.551863 CGGTTGAAGCTTTTTATGCCACA 60.552 43.478 0.00 0.00 0.00 4.17
571 572 1.227089 CCATCCTCGCCGTCTTCTG 60.227 63.158 0.00 0.00 0.00 3.02
572 573 1.667154 CCATCCTCGCCGTCTTCTGA 61.667 60.000 0.00 0.00 0.00 3.27
578 581 4.475135 GCCGTCTTCTGAGCCCCC 62.475 72.222 0.00 0.00 0.00 5.40
579 582 4.148825 CCGTCTTCTGAGCCCCCG 62.149 72.222 0.00 0.00 0.00 5.73
580 583 3.382832 CGTCTTCTGAGCCCCCGT 61.383 66.667 0.00 0.00 0.00 5.28
617 620 1.289694 CAAAAAGCGCCATGGCTGA 59.710 52.632 33.07 0.00 43.93 4.26
804 820 1.142474 CGCTTCGGAGGTAAACGTTT 58.858 50.000 18.90 18.90 0.00 3.60
805 821 1.125566 CGCTTCGGAGGTAAACGTTTC 59.874 52.381 18.42 9.19 0.00 2.78
806 822 1.462283 GCTTCGGAGGTAAACGTTTCC 59.538 52.381 18.42 17.46 0.00 3.13
809 825 3.473923 TCGGAGGTAAACGTTTCCTTT 57.526 42.857 23.79 10.48 0.00 3.11
844 860 5.358725 TGAGGTCACATCGTGCTAAACTATA 59.641 40.000 0.00 0.00 32.98 1.31
862 878 7.663043 AACTATACAAAAGGGGTCAAAACAA 57.337 32.000 0.00 0.00 0.00 2.83
879 895 1.549950 ACAATGAATTTGGCCGGAGGT 60.550 47.619 5.05 0.00 44.48 3.85
1015 1031 3.256631 ACGCTTCGTAGGGTTTTTCTCTA 59.743 43.478 5.92 0.00 44.32 2.43
1238 1254 1.676678 CCAATCCGAAGAGAGCCCGA 61.677 60.000 0.00 0.00 0.00 5.14
2065 2081 8.146053 TCAAGGTCAGATTTTCCACTCTAATA 57.854 34.615 0.00 0.00 0.00 0.98
2132 2148 4.120589 GCTGCAGGTAGTACTATGTTTCC 58.879 47.826 17.12 2.10 0.00 3.13
2328 2345 2.225491 TGACTACGCCTTTGTGATTTGC 59.775 45.455 0.00 0.00 0.00 3.68
2384 2401 6.040842 AGTGTTTTTATGCCTCTGATGTTTGT 59.959 34.615 0.00 0.00 0.00 2.83
2389 2406 3.988379 TGCCTCTGATGTTTGTGTTTC 57.012 42.857 0.00 0.00 0.00 2.78
2410 2427 2.548067 CGAGTGGCTAGTTTGTGGACTT 60.548 50.000 0.00 0.00 0.00 3.01
2444 2461 2.380064 ACAAGCCCCAGAATTGTTGA 57.620 45.000 0.00 0.00 33.49 3.18
2637 2661 6.834168 TGGTAAACTTTGGGAATCTGATTC 57.166 37.500 19.67 19.67 38.55 2.52
2712 2833 6.464222 CATGTAAGTGACTTTAGGAAGACCA 58.536 40.000 1.97 0.00 38.94 4.02
2753 2875 0.874390 CAACAGTGGGTCCATCAACG 59.126 55.000 0.00 0.00 0.00 4.10
2849 2971 7.402811 TTTATCATAACATACTGCTACGTGC 57.597 36.000 0.00 0.00 43.25 5.34
2907 3029 2.884012 TGATGATTTTGACGTGGCAAGT 59.116 40.909 5.57 5.57 0.00 3.16
2921 3043 2.167281 TGGCAAGTGCAAGTGCTTTTAA 59.833 40.909 19.18 2.20 44.36 1.52
2923 3045 3.245990 GGCAAGTGCAAGTGCTTTTAAAG 59.754 43.478 19.18 0.00 44.36 1.85
2924 3046 3.245990 GCAAGTGCAAGTGCTTTTAAAGG 59.754 43.478 14.13 0.00 42.66 3.11
2925 3047 4.681744 CAAGTGCAAGTGCTTTTAAAGGA 58.318 39.130 6.84 0.15 42.66 3.36
2926 3048 5.291971 CAAGTGCAAGTGCTTTTAAAGGAT 58.708 37.500 6.84 0.00 42.66 3.24
2928 3050 5.291971 AGTGCAAGTGCTTTTAAAGGATTG 58.708 37.500 6.84 10.62 42.66 2.67
2930 3052 5.928264 GTGCAAGTGCTTTTAAAGGATTGAT 59.072 36.000 17.73 0.41 42.66 2.57
2931 3053 7.039784 AGTGCAAGTGCTTTTAAAGGATTGATA 60.040 33.333 17.73 8.62 42.66 2.15
2932 3054 7.062255 GTGCAAGTGCTTTTAAAGGATTGATAC 59.938 37.037 17.73 13.51 42.66 2.24
2933 3055 6.531594 GCAAGTGCTTTTAAAGGATTGATACC 59.468 38.462 17.73 1.06 38.21 2.73
2934 3056 7.601856 CAAGTGCTTTTAAAGGATTGATACCA 58.398 34.615 6.84 0.00 0.00 3.25
2935 3057 7.961326 AGTGCTTTTAAAGGATTGATACCAT 57.039 32.000 6.84 0.00 0.00 3.55
2936 3058 8.000780 AGTGCTTTTAAAGGATTGATACCATC 57.999 34.615 6.84 0.00 0.00 3.51
2937 3059 7.615365 AGTGCTTTTAAAGGATTGATACCATCA 59.385 33.333 6.84 0.00 37.55 3.07
3968 4099 2.363680 AGTAGATGGAGCTCAATCGGTG 59.636 50.000 22.73 0.00 0.00 4.94
3986 4117 7.784633 ATCGGTGAAAACAAAAATGTCATTT 57.215 28.000 4.91 4.91 0.00 2.32
4486 4617 2.589014 GTTTTCGGAAGATGCAAGCAG 58.411 47.619 0.00 0.00 41.60 4.24
4591 4722 0.464452 AGGTAGTTAGCCGGTCATGC 59.536 55.000 1.90 0.00 0.00 4.06
4626 4757 3.165058 TGAAATCTAGCAGTAGCACCG 57.835 47.619 0.00 0.00 45.49 4.94
4672 4803 5.066593 GGAACTGATGTGATAAAGATCCCC 58.933 45.833 0.00 0.00 0.00 4.81
4690 4821 2.288152 CCCCATTATCGGGCGAATTTTG 60.288 50.000 0.00 0.00 45.90 2.44
4888 5089 9.050601 AGATTTATTTATCTTTCTCGGAGCAAG 57.949 33.333 10.62 10.62 30.76 4.01
4895 5096 0.252103 TTCTCGGAGCAAGTACCCCT 60.252 55.000 0.00 0.00 0.00 4.79
4904 5105 2.174854 AGCAAGTACCCCTGAGTTTGTT 59.825 45.455 0.00 0.00 0.00 2.83
4905 5106 2.293399 GCAAGTACCCCTGAGTTTGTTG 59.707 50.000 0.00 0.00 0.00 3.33
4962 5182 4.214971 CAGTCTCACTCCACCTCATTTTTG 59.785 45.833 0.00 0.00 0.00 2.44
4986 5250 5.104900 GGTCTTCTATTTAGAACCCAGCAGA 60.105 44.000 0.00 0.00 37.40 4.26
5038 5307 0.991920 TCACCCCAATCTCCCTCAAC 59.008 55.000 0.00 0.00 0.00 3.18
5102 5375 2.598589 CACCTCGCATGTTTTGAATGG 58.401 47.619 0.00 0.00 0.00 3.16
5128 5401 5.570320 ACTTATGTAGCCCACTCATGTTTT 58.430 37.500 0.00 0.00 0.00 2.43
5156 5429 9.668497 AATGAGGAAGTATTTTACAAGTACTCC 57.332 33.333 0.00 0.00 0.00 3.85
5157 5430 7.618137 TGAGGAAGTATTTTACAAGTACTCCC 58.382 38.462 0.00 0.00 0.00 4.30
5158 5431 7.456902 TGAGGAAGTATTTTACAAGTACTCCCT 59.543 37.037 0.00 0.00 36.10 4.20
5159 5432 7.849160 AGGAAGTATTTTACAAGTACTCCCTC 58.151 38.462 0.00 0.00 28.30 4.30
5160 5433 7.046652 GGAAGTATTTTACAAGTACTCCCTCC 58.953 42.308 0.00 0.00 0.00 4.30
5161 5434 6.218108 AGTATTTTACAAGTACTCCCTCCG 57.782 41.667 0.00 0.00 0.00 4.63
5162 5435 5.718607 AGTATTTTACAAGTACTCCCTCCGT 59.281 40.000 0.00 0.00 0.00 4.69
5163 5436 4.961438 TTTTACAAGTACTCCCTCCGTT 57.039 40.909 0.00 0.00 0.00 4.44
5164 5437 4.525912 TTTACAAGTACTCCCTCCGTTC 57.474 45.455 0.00 0.00 0.00 3.95
5165 5438 1.264295 ACAAGTACTCCCTCCGTTCC 58.736 55.000 0.00 0.00 0.00 3.62
5166 5439 1.203149 ACAAGTACTCCCTCCGTTCCT 60.203 52.381 0.00 0.00 0.00 3.36
5167 5440 2.042162 ACAAGTACTCCCTCCGTTCCTA 59.958 50.000 0.00 0.00 0.00 2.94
5168 5441 3.094572 CAAGTACTCCCTCCGTTCCTAA 58.905 50.000 0.00 0.00 0.00 2.69
5169 5442 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
5170 5443 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
5171 5444 5.134725 AGTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
5172 5445 4.892345 AGTACTCCCTCCGTTCCTAAATAC 59.108 45.833 0.00 0.00 0.00 1.89
5173 5446 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
5174 5447 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
5175 5448 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
5176 5449 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
5177 5450 4.533311 TCCCTCCGTTCCTAAATACTTGTT 59.467 41.667 0.00 0.00 0.00 2.83
5178 5451 5.013391 TCCCTCCGTTCCTAAATACTTGTTT 59.987 40.000 0.00 0.00 0.00 2.83
5179 5452 5.708697 CCCTCCGTTCCTAAATACTTGTTTT 59.291 40.000 0.00 0.00 0.00 2.43
5180 5453 6.208007 CCCTCCGTTCCTAAATACTTGTTTTT 59.792 38.462 0.00 0.00 0.00 1.94
5181 5454 7.303261 CCTCCGTTCCTAAATACTTGTTTTTC 58.697 38.462 0.00 0.00 0.00 2.29
5182 5455 7.174426 CCTCCGTTCCTAAATACTTGTTTTTCT 59.826 37.037 0.00 0.00 0.00 2.52
5183 5456 9.211485 CTCCGTTCCTAAATACTTGTTTTTCTA 57.789 33.333 0.00 0.00 0.00 2.10
5184 5457 9.211485 TCCGTTCCTAAATACTTGTTTTTCTAG 57.789 33.333 0.00 0.00 0.00 2.43
5185 5458 9.211485 CCGTTCCTAAATACTTGTTTTTCTAGA 57.789 33.333 0.00 0.00 0.00 2.43
5197 5470 9.921637 ACTTGTTTTTCTAGACATTTCAACAAA 57.078 25.926 7.60 0.00 33.67 2.83
5213 5486 6.403333 TCAACAAATGACTACATACGAAGC 57.597 37.500 0.00 0.00 35.50 3.86
5214 5487 5.929415 TCAACAAATGACTACATACGAAGCA 59.071 36.000 0.00 0.00 35.50 3.91
5215 5488 6.425417 TCAACAAATGACTACATACGAAGCAA 59.575 34.615 0.00 0.00 35.50 3.91
5216 5489 6.795098 ACAAATGACTACATACGAAGCAAA 57.205 33.333 0.00 0.00 35.50 3.68
5217 5490 7.197071 ACAAATGACTACATACGAAGCAAAA 57.803 32.000 0.00 0.00 35.50 2.44
5218 5491 7.816640 ACAAATGACTACATACGAAGCAAAAT 58.183 30.769 0.00 0.00 35.50 1.82
5219 5492 7.750458 ACAAATGACTACATACGAAGCAAAATG 59.250 33.333 0.00 0.00 35.50 2.32
5220 5493 7.609760 AATGACTACATACGAAGCAAAATGA 57.390 32.000 0.00 0.00 35.50 2.57
5221 5494 6.647212 TGACTACATACGAAGCAAAATGAG 57.353 37.500 0.00 0.00 0.00 2.90
5222 5495 6.163476 TGACTACATACGAAGCAAAATGAGT 58.837 36.000 0.00 0.00 0.00 3.41
5223 5496 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
5224 5497 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
5225 5498 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
5226 5499 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
5227 5500 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
5228 5501 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
5229 5502 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
5230 5503 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
5231 5504 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
5232 5505 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
5256 5529 9.561270 CACTCTAAATATGTCTACATACATCCG 57.439 37.037 4.98 0.00 41.15 4.18
5257 5530 9.298250 ACTCTAAATATGTCTACATACATCCGT 57.702 33.333 4.98 0.00 41.15 4.69
5274 5547 7.342769 ACATCCGTATGTAGTAGTCATTTGA 57.657 36.000 0.00 0.00 44.66 2.69
5275 5548 7.778083 ACATCCGTATGTAGTAGTCATTTGAA 58.222 34.615 0.00 0.00 44.66 2.69
5276 5549 8.255206 ACATCCGTATGTAGTAGTCATTTGAAA 58.745 33.333 0.00 0.00 44.66 2.69
5277 5550 9.261180 CATCCGTATGTAGTAGTCATTTGAAAT 57.739 33.333 0.00 0.00 0.00 2.17
5278 5551 8.642908 TCCGTATGTAGTAGTCATTTGAAATG 57.357 34.615 11.54 11.54 0.00 2.32
5279 5552 8.255206 TCCGTATGTAGTAGTCATTTGAAATGT 58.745 33.333 16.62 2.38 0.00 2.71
5280 5553 8.879759 CCGTATGTAGTAGTCATTTGAAATGTT 58.120 33.333 16.62 9.61 0.00 2.71
5308 5581 8.947115 AGAAAGACAAATATTTAGAAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
5309 5582 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
5310 5583 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
5337 5612 9.090692 GTACATGACAATACATAGTTTTACCGT 57.909 33.333 0.00 0.00 0.00 4.83
5349 5624 5.233957 AGTTTTACCGTAACACAAACCAC 57.766 39.130 9.64 0.00 0.00 4.16
5470 5745 7.894708 TCAAATTTCAAAATCTGGACATGCTA 58.105 30.769 0.00 0.00 0.00 3.49
5571 5846 5.903810 AGTTTCTCTTCGTCTGTTGTAAGT 58.096 37.500 0.00 0.00 0.00 2.24
5655 5931 6.576662 AGCAACGCACATCTATACTACTAT 57.423 37.500 0.00 0.00 0.00 2.12
5656 5932 7.683437 AGCAACGCACATCTATACTACTATA 57.317 36.000 0.00 0.00 0.00 1.31
5657 5933 8.282455 AGCAACGCACATCTATACTACTATAT 57.718 34.615 0.00 0.00 0.00 0.86
5658 5934 9.392259 AGCAACGCACATCTATACTACTATATA 57.608 33.333 0.00 0.00 0.00 0.86
5659 5935 9.653067 GCAACGCACATCTATACTACTATATAG 57.347 37.037 8.27 8.27 36.74 1.31
5662 5938 9.887629 ACGCACATCTATACTACTATATAGTGT 57.112 33.333 23.09 19.41 36.76 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.124351 TACCGTCGCAGGGCTTCG 62.124 66.667 1.26 0.00 35.02 3.79
1 2 2.202756 CTACCGTCGCAGGGCTTC 60.203 66.667 1.26 0.00 35.02 3.86
2 3 2.280552 TTCTACCGTCGCAGGGCTT 61.281 57.895 1.26 0.00 35.02 4.35
3 4 2.678934 TTCTACCGTCGCAGGGCT 60.679 61.111 1.26 0.00 35.02 5.19
4 5 2.508663 GTTCTACCGTCGCAGGGC 60.509 66.667 1.26 0.00 35.02 5.19
5 6 0.527817 GATGTTCTACCGTCGCAGGG 60.528 60.000 1.26 0.00 35.02 4.45
6 7 0.172578 TGATGTTCTACCGTCGCAGG 59.827 55.000 0.00 0.00 37.30 4.85
7 8 1.920574 CTTGATGTTCTACCGTCGCAG 59.079 52.381 0.00 0.00 0.00 5.18
8 9 1.542472 TCTTGATGTTCTACCGTCGCA 59.458 47.619 0.00 0.00 0.00 5.10
9 10 2.273370 TCTTGATGTTCTACCGTCGC 57.727 50.000 0.00 0.00 0.00 5.19
10 11 3.036633 CGATCTTGATGTTCTACCGTCG 58.963 50.000 0.00 0.00 0.00 5.12
11 12 4.030134 ACGATCTTGATGTTCTACCGTC 57.970 45.455 0.00 0.00 0.00 4.79
12 13 3.442625 TGACGATCTTGATGTTCTACCGT 59.557 43.478 0.00 0.00 0.00 4.83
13 14 3.791887 GTGACGATCTTGATGTTCTACCG 59.208 47.826 0.00 0.00 0.00 4.02
14 15 4.113354 GGTGACGATCTTGATGTTCTACC 58.887 47.826 0.00 0.00 0.00 3.18
15 16 4.563184 GTGGTGACGATCTTGATGTTCTAC 59.437 45.833 0.00 0.00 0.00 2.59
16 17 4.744570 GTGGTGACGATCTTGATGTTCTA 58.255 43.478 0.00 0.00 0.00 2.10
17 18 3.589988 GTGGTGACGATCTTGATGTTCT 58.410 45.455 0.00 0.00 0.00 3.01
18 19 3.999229 GTGGTGACGATCTTGATGTTC 57.001 47.619 0.00 0.00 0.00 3.18
44 45 1.444553 GAGGAGTTCCGTCAGCACG 60.445 63.158 0.00 0.00 46.29 5.34
45 46 1.079750 GGAGGAGTTCCGTCAGCAC 60.080 63.158 0.00 0.00 42.08 4.40
46 47 3.377656 GGAGGAGTTCCGTCAGCA 58.622 61.111 0.00 0.00 42.08 4.41
53 54 4.144703 GCGTCGGGGAGGAGTTCC 62.145 72.222 0.00 0.00 46.00 3.62
54 55 2.168666 AAAGCGTCGGGGAGGAGTTC 62.169 60.000 0.00 0.00 0.00 3.01
55 56 2.214920 AAAGCGTCGGGGAGGAGTT 61.215 57.895 0.00 0.00 0.00 3.01
56 57 2.603776 AAAGCGTCGGGGAGGAGT 60.604 61.111 0.00 0.00 0.00 3.85
57 58 2.125512 CAAAGCGTCGGGGAGGAG 60.126 66.667 0.00 0.00 0.00 3.69
58 59 4.388499 GCAAAGCGTCGGGGAGGA 62.388 66.667 0.00 0.00 0.00 3.71
59 60 4.394712 AGCAAAGCGTCGGGGAGG 62.395 66.667 0.00 0.00 0.00 4.30
60 61 3.121030 CAGCAAAGCGTCGGGGAG 61.121 66.667 0.00 0.00 0.00 4.30
61 62 4.697756 CCAGCAAAGCGTCGGGGA 62.698 66.667 0.00 0.00 0.00 4.81
62 63 3.976701 ATCCAGCAAAGCGTCGGGG 62.977 63.158 0.00 0.00 0.00 5.73
63 64 2.436646 ATCCAGCAAAGCGTCGGG 60.437 61.111 0.00 0.00 0.00 5.14
64 65 2.802667 CGATCCAGCAAAGCGTCGG 61.803 63.158 0.00 0.00 0.00 4.79
65 66 2.697425 CGATCCAGCAAAGCGTCG 59.303 61.111 0.00 0.00 0.00 5.12
66 67 1.424493 CTCCGATCCAGCAAAGCGTC 61.424 60.000 0.00 0.00 0.00 5.19
67 68 1.448540 CTCCGATCCAGCAAAGCGT 60.449 57.895 0.00 0.00 0.00 5.07
68 69 2.817423 GCTCCGATCCAGCAAAGCG 61.817 63.158 6.46 0.00 36.82 4.68
69 70 2.476320 GGCTCCGATCCAGCAAAGC 61.476 63.158 12.26 1.54 38.77 3.51
70 71 1.821332 GGGCTCCGATCCAGCAAAG 60.821 63.158 12.26 0.00 38.77 2.77
71 72 2.272146 GGGCTCCGATCCAGCAAA 59.728 61.111 12.26 0.00 38.77 3.68
82 83 2.682582 GATGACAATCCCCGGGCTCC 62.683 65.000 17.73 0.42 0.00 4.70
83 84 1.227973 GATGACAATCCCCGGGCTC 60.228 63.158 17.73 4.13 0.00 4.70
84 85 2.919043 GATGACAATCCCCGGGCT 59.081 61.111 17.73 0.11 0.00 5.19
85 86 2.591715 CGATGACAATCCCCGGGC 60.592 66.667 17.73 0.00 0.00 6.13
86 87 1.069765 CTCGATGACAATCCCCGGG 59.930 63.158 15.80 15.80 0.00 5.73
87 88 0.178068 AACTCGATGACAATCCCCGG 59.822 55.000 0.00 0.00 0.00 5.73
88 89 1.290203 CAACTCGATGACAATCCCCG 58.710 55.000 0.00 0.00 0.00 5.73
89 90 2.403252 ACAACTCGATGACAATCCCC 57.597 50.000 0.00 0.00 0.00 4.81
90 91 2.858344 CGTACAACTCGATGACAATCCC 59.142 50.000 0.00 0.00 0.00 3.85
91 92 3.303495 CACGTACAACTCGATGACAATCC 59.697 47.826 0.00 0.00 0.00 3.01
92 93 3.918591 ACACGTACAACTCGATGACAATC 59.081 43.478 0.00 0.00 0.00 2.67
93 94 3.673338 CACACGTACAACTCGATGACAAT 59.327 43.478 0.00 0.00 0.00 2.71
94 95 3.047093 CACACGTACAACTCGATGACAA 58.953 45.455 0.00 0.00 0.00 3.18
95 96 2.657184 CACACGTACAACTCGATGACA 58.343 47.619 0.00 0.00 0.00 3.58
96 97 1.385743 GCACACGTACAACTCGATGAC 59.614 52.381 0.00 0.00 0.00 3.06
97 98 1.268625 AGCACACGTACAACTCGATGA 59.731 47.619 0.00 0.00 0.00 2.92
98 99 1.698165 AGCACACGTACAACTCGATG 58.302 50.000 0.00 0.00 0.00 3.84
99 100 3.189910 TCTTAGCACACGTACAACTCGAT 59.810 43.478 0.00 0.00 0.00 3.59
100 101 2.549329 TCTTAGCACACGTACAACTCGA 59.451 45.455 0.00 0.00 0.00 4.04
101 102 2.924903 TCTTAGCACACGTACAACTCG 58.075 47.619 0.00 0.00 0.00 4.18
102 103 4.296690 AGTTCTTAGCACACGTACAACTC 58.703 43.478 0.00 0.00 0.00 3.01
103 104 4.296690 GAGTTCTTAGCACACGTACAACT 58.703 43.478 0.00 0.00 0.00 3.16
104 105 3.119136 CGAGTTCTTAGCACACGTACAAC 59.881 47.826 0.00 0.00 0.00 3.32
105 106 3.302555 CGAGTTCTTAGCACACGTACAA 58.697 45.455 0.00 0.00 0.00 2.41
106 107 2.351060 CCGAGTTCTTAGCACACGTACA 60.351 50.000 1.62 0.00 0.00 2.90
107 108 2.095567 TCCGAGTTCTTAGCACACGTAC 60.096 50.000 1.62 0.00 0.00 3.67
108 109 2.153645 TCCGAGTTCTTAGCACACGTA 58.846 47.619 1.62 0.00 0.00 3.57
109 110 0.956633 TCCGAGTTCTTAGCACACGT 59.043 50.000 1.62 0.00 0.00 4.49
110 111 1.618861 CTCCGAGTTCTTAGCACACG 58.381 55.000 0.00 0.00 0.00 4.49
111 112 1.272769 ACCTCCGAGTTCTTAGCACAC 59.727 52.381 0.00 0.00 0.00 3.82
112 113 1.272490 CACCTCCGAGTTCTTAGCACA 59.728 52.381 0.00 0.00 0.00 4.57
113 114 1.997669 CACCTCCGAGTTCTTAGCAC 58.002 55.000 0.00 0.00 0.00 4.40
114 115 0.246635 GCACCTCCGAGTTCTTAGCA 59.753 55.000 0.00 0.00 0.00 3.49
115 116 0.460459 GGCACCTCCGAGTTCTTAGC 60.460 60.000 0.00 0.00 0.00 3.09
116 117 3.742983 GGCACCTCCGAGTTCTTAG 57.257 57.895 0.00 0.00 0.00 2.18
126 127 2.183555 CGTTACTCCGGCACCTCC 59.816 66.667 0.00 0.00 0.00 4.30
127 128 2.183555 CCGTTACTCCGGCACCTC 59.816 66.667 0.00 0.00 41.78 3.85
134 135 0.108329 ATCCAAGCACCGTTACTCCG 60.108 55.000 0.00 0.00 0.00 4.63
135 136 1.653151 GATCCAAGCACCGTTACTCC 58.347 55.000 0.00 0.00 0.00 3.85
136 137 1.278238 CGATCCAAGCACCGTTACTC 58.722 55.000 0.00 0.00 0.00 2.59
137 138 0.108329 CCGATCCAAGCACCGTTACT 60.108 55.000 0.00 0.00 0.00 2.24
138 139 0.390735 ACCGATCCAAGCACCGTTAC 60.391 55.000 0.00 0.00 0.00 2.50
139 140 0.108520 GACCGATCCAAGCACCGTTA 60.109 55.000 0.00 0.00 0.00 3.18
140 141 1.375523 GACCGATCCAAGCACCGTT 60.376 57.895 0.00 0.00 0.00 4.44
141 142 2.264794 GACCGATCCAAGCACCGT 59.735 61.111 0.00 0.00 0.00 4.83
142 143 2.885644 CGACCGATCCAAGCACCG 60.886 66.667 0.00 0.00 0.00 4.94
143 144 2.311688 ATCCGACCGATCCAAGCACC 62.312 60.000 0.00 0.00 0.00 5.01
144 145 0.876342 GATCCGACCGATCCAAGCAC 60.876 60.000 0.00 0.00 41.51 4.40
145 146 1.441729 GATCCGACCGATCCAAGCA 59.558 57.895 0.00 0.00 41.51 3.91
146 147 1.661821 CGATCCGACCGATCCAAGC 60.662 63.158 0.00 0.00 44.07 4.01
147 148 1.007271 CCGATCCGACCGATCCAAG 60.007 63.158 0.00 0.00 44.07 3.61
148 149 2.495409 CCCGATCCGACCGATCCAA 61.495 63.158 0.00 0.00 44.07 3.53
149 150 2.910479 CCCGATCCGACCGATCCA 60.910 66.667 0.00 0.00 44.07 3.41
150 151 2.143594 CTTCCCGATCCGACCGATCC 62.144 65.000 0.00 0.00 44.07 3.36
151 152 1.170919 TCTTCCCGATCCGACCGATC 61.171 60.000 0.00 0.00 43.58 3.69
152 153 1.152819 TCTTCCCGATCCGACCGAT 60.153 57.895 0.00 0.00 0.00 4.18
153 154 2.117156 GTCTTCCCGATCCGACCGA 61.117 63.158 0.00 0.00 0.00 4.69
154 155 2.412112 GTCTTCCCGATCCGACCG 59.588 66.667 0.00 0.00 0.00 4.79
155 156 1.097547 TACGTCTTCCCGATCCGACC 61.098 60.000 0.00 0.00 0.00 4.79
156 157 0.028637 GTACGTCTTCCCGATCCGAC 59.971 60.000 0.00 0.00 0.00 4.79
157 158 1.431488 CGTACGTCTTCCCGATCCGA 61.431 60.000 7.22 0.00 0.00 4.55
158 159 1.010350 CGTACGTCTTCCCGATCCG 60.010 63.158 7.22 0.00 0.00 4.18
159 160 0.028637 GTCGTACGTCTTCCCGATCC 59.971 60.000 16.05 0.00 0.00 3.36
160 161 1.012841 AGTCGTACGTCTTCCCGATC 58.987 55.000 16.05 0.00 0.00 3.69
161 162 1.936547 GTAGTCGTACGTCTTCCCGAT 59.063 52.381 19.61 0.00 0.00 4.18
162 163 1.066858 AGTAGTCGTACGTCTTCCCGA 60.067 52.381 19.61 0.00 33.97 5.14
163 164 1.363744 AGTAGTCGTACGTCTTCCCG 58.636 55.000 19.61 0.00 33.97 5.14
164 165 2.096657 GGAAGTAGTCGTACGTCTTCCC 59.903 54.545 29.72 19.63 41.80 3.97
165 166 3.006247 AGGAAGTAGTCGTACGTCTTCC 58.994 50.000 31.02 31.02 44.62 3.46
166 167 3.932089 AGAGGAAGTAGTCGTACGTCTTC 59.068 47.826 19.61 21.62 41.24 2.87
167 168 3.936564 AGAGGAAGTAGTCGTACGTCTT 58.063 45.455 19.61 16.11 37.67 3.01
168 169 3.608316 AGAGGAAGTAGTCGTACGTCT 57.392 47.619 18.54 18.54 37.67 4.18
169 170 3.241784 CGTAGAGGAAGTAGTCGTACGTC 59.758 52.174 16.05 10.06 37.04 4.34
170 171 3.182967 CGTAGAGGAAGTAGTCGTACGT 58.817 50.000 16.05 0.00 33.97 3.57
171 172 3.182967 ACGTAGAGGAAGTAGTCGTACG 58.817 50.000 9.53 9.53 37.23 3.67
172 173 4.390297 ACAACGTAGAGGAAGTAGTCGTAC 59.610 45.833 0.00 0.00 0.00 3.67
173 174 4.389992 CACAACGTAGAGGAAGTAGTCGTA 59.610 45.833 0.00 0.00 0.00 3.43
174 175 3.188048 CACAACGTAGAGGAAGTAGTCGT 59.812 47.826 0.00 0.00 0.00 4.34
175 176 3.188048 ACACAACGTAGAGGAAGTAGTCG 59.812 47.826 0.00 0.00 0.00 4.18
176 177 4.214971 TGACACAACGTAGAGGAAGTAGTC 59.785 45.833 0.00 0.00 0.00 2.59
177 178 4.139786 TGACACAACGTAGAGGAAGTAGT 58.860 43.478 0.00 0.00 0.00 2.73
178 179 4.761235 TGACACAACGTAGAGGAAGTAG 57.239 45.455 0.00 0.00 0.00 2.57
179 180 4.555313 CGTTGACACAACGTAGAGGAAGTA 60.555 45.833 22.91 0.00 38.69 2.24
180 181 3.714391 GTTGACACAACGTAGAGGAAGT 58.286 45.455 0.00 0.00 0.00 3.01
181 182 2.724690 CGTTGACACAACGTAGAGGAAG 59.275 50.000 22.91 0.00 38.69 3.46
182 183 2.734670 CGTTGACACAACGTAGAGGAA 58.265 47.619 22.91 0.00 38.69 3.36
183 184 1.601162 GCGTTGACACAACGTAGAGGA 60.601 52.381 28.36 0.00 44.69 3.71
184 185 0.782384 GCGTTGACACAACGTAGAGG 59.218 55.000 28.36 8.91 44.69 3.69
185 186 1.767289 AGCGTTGACACAACGTAGAG 58.233 50.000 28.36 9.47 44.69 2.43
186 187 2.121786 GAAGCGTTGACACAACGTAGA 58.878 47.619 28.36 0.00 44.69 2.59
187 188 1.191647 GGAAGCGTTGACACAACGTAG 59.808 52.381 28.36 10.04 44.69 3.51
188 189 1.210870 GGAAGCGTTGACACAACGTA 58.789 50.000 28.36 0.00 44.69 3.57
189 190 1.758319 CGGAAGCGTTGACACAACGT 61.758 55.000 28.36 15.99 44.69 3.99
190 191 1.083657 CGGAAGCGTTGACACAACG 60.084 57.895 25.58 25.58 45.56 4.10
191 192 4.893241 CGGAAGCGTTGACACAAC 57.107 55.556 0.00 0.00 0.00 3.32
210 211 2.282674 TACCCACGCAGACCGACT 60.283 61.111 0.00 0.00 41.02 4.18
211 212 2.126189 GTACCCACGCAGACCGAC 60.126 66.667 0.00 0.00 41.02 4.79
212 213 3.740397 CGTACCCACGCAGACCGA 61.740 66.667 0.00 0.00 42.05 4.69
221 222 2.555757 AGAGTGTTGTCTACGTACCCAC 59.444 50.000 0.00 0.00 0.00 4.61
222 223 2.816087 GAGAGTGTTGTCTACGTACCCA 59.184 50.000 0.00 0.00 0.00 4.51
223 224 2.163211 GGAGAGTGTTGTCTACGTACCC 59.837 54.545 0.00 0.00 0.00 3.69
224 225 2.163211 GGGAGAGTGTTGTCTACGTACC 59.837 54.545 0.00 0.00 0.00 3.34
225 226 2.163211 GGGGAGAGTGTTGTCTACGTAC 59.837 54.545 0.00 0.00 0.00 3.67
226 227 2.040813 AGGGGAGAGTGTTGTCTACGTA 59.959 50.000 0.00 0.00 0.00 3.57
227 228 1.203025 AGGGGAGAGTGTTGTCTACGT 60.203 52.381 0.00 0.00 0.00 3.57
228 229 1.473278 GAGGGGAGAGTGTTGTCTACG 59.527 57.143 0.00 0.00 0.00 3.51
229 230 2.756207 GAGAGGGGAGAGTGTTGTCTAC 59.244 54.545 0.00 0.00 0.00 2.59
230 231 2.618302 CGAGAGGGGAGAGTGTTGTCTA 60.618 54.545 0.00 0.00 0.00 2.59
231 232 1.888826 CGAGAGGGGAGAGTGTTGTCT 60.889 57.143 0.00 0.00 0.00 3.41
232 233 0.528470 CGAGAGGGGAGAGTGTTGTC 59.472 60.000 0.00 0.00 0.00 3.18
233 234 0.178958 ACGAGAGGGGAGAGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
234 235 0.969894 AACGAGAGGGGAGAGTGTTG 59.030 55.000 0.00 0.00 0.00 3.33
235 236 0.969894 CAACGAGAGGGGAGAGTGTT 59.030 55.000 0.00 0.00 0.00 3.32
236 237 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
237 238 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
238 239 1.077625 AGCAACGAGAGGGGAGAGT 59.922 57.895 0.00 0.00 0.00 3.24
239 240 1.254284 ACAGCAACGAGAGGGGAGAG 61.254 60.000 0.00 0.00 0.00 3.20
240 241 1.228894 ACAGCAACGAGAGGGGAGA 60.229 57.895 0.00 0.00 0.00 3.71
241 242 1.079543 CACAGCAACGAGAGGGGAG 60.080 63.158 0.00 0.00 0.00 4.30
242 243 3.059982 CACAGCAACGAGAGGGGA 58.940 61.111 0.00 0.00 0.00 4.81
243 244 2.743928 GCACAGCAACGAGAGGGG 60.744 66.667 0.00 0.00 0.00 4.79
244 245 1.364626 GATGCACAGCAACGAGAGGG 61.365 60.000 0.00 0.00 43.62 4.30
245 246 0.671472 TGATGCACAGCAACGAGAGG 60.671 55.000 0.00 0.00 43.62 3.69
246 247 1.326852 GATGATGCACAGCAACGAGAG 59.673 52.381 0.00 0.00 43.62 3.20
247 248 1.338011 TGATGATGCACAGCAACGAGA 60.338 47.619 5.03 0.00 43.62 4.04
248 249 1.081094 TGATGATGCACAGCAACGAG 58.919 50.000 5.03 0.00 43.62 4.18
249 250 3.230115 TGATGATGCACAGCAACGA 57.770 47.368 5.03 0.00 43.62 3.85
254 255 3.853676 GCAAGATCATGATGATGCACAGC 60.854 47.826 26.11 5.99 37.20 4.40
255 256 3.607078 CGCAAGATCATGATGATGCACAG 60.607 47.826 28.33 16.32 37.20 3.66
256 257 2.289547 CGCAAGATCATGATGATGCACA 59.710 45.455 28.33 0.00 37.20 4.57
257 258 2.289820 ACGCAAGATCATGATGATGCAC 59.710 45.455 28.33 11.00 37.20 4.57
258 259 2.289547 CACGCAAGATCATGATGATGCA 59.710 45.455 28.33 0.00 37.20 3.96
259 260 2.289820 ACACGCAAGATCATGATGATGC 59.710 45.455 23.24 23.24 37.20 3.91
260 261 3.848554 GCACACGCAAGATCATGATGATG 60.849 47.826 14.30 12.45 36.10 3.07
261 262 2.289820 GCACACGCAAGATCATGATGAT 59.710 45.455 14.30 7.81 37.74 2.45
262 263 1.667212 GCACACGCAAGATCATGATGA 59.333 47.619 14.30 0.00 43.62 2.92
263 264 1.593793 CGCACACGCAAGATCATGATG 60.594 52.381 14.30 1.04 43.62 3.07
264 265 0.654160 CGCACACGCAAGATCATGAT 59.346 50.000 8.25 8.25 43.62 2.45
265 266 0.670239 ACGCACACGCAAGATCATGA 60.670 50.000 1.25 0.00 45.53 3.07
266 267 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
267 268 1.280982 CTACGCACACGCAAGATCAT 58.719 50.000 0.00 0.00 45.53 2.45
268 269 0.735978 CCTACGCACACGCAAGATCA 60.736 55.000 0.00 0.00 45.53 2.92
269 270 0.457853 TCCTACGCACACGCAAGATC 60.458 55.000 0.00 0.00 45.53 2.75
270 271 0.037697 TTCCTACGCACACGCAAGAT 60.038 50.000 0.00 0.00 45.53 2.40
271 272 0.249531 TTTCCTACGCACACGCAAGA 60.250 50.000 0.00 0.00 45.53 3.02
272 273 0.584396 TTTTCCTACGCACACGCAAG 59.416 50.000 0.00 0.00 45.53 4.01
273 274 1.231221 ATTTTCCTACGCACACGCAA 58.769 45.000 0.00 0.00 45.53 4.85
274 275 1.231221 AATTTTCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
275 276 2.325509 AAATTTTCCTACGCACACGC 57.674 45.000 0.00 0.00 45.53 5.34
276 277 6.074569 AATTTCAAAATTTTCCTACGCACACG 60.075 34.615 0.00 0.00 39.30 4.49
277 278 6.763303 ATTTCAAAATTTTCCTACGCACAC 57.237 33.333 0.00 0.00 0.00 3.82
278 279 8.138712 AGTAATTTCAAAATTTTCCTACGCACA 58.861 29.630 0.00 0.00 39.24 4.57
279 280 8.515473 AGTAATTTCAAAATTTTCCTACGCAC 57.485 30.769 0.00 0.00 39.24 5.34
280 281 9.615295 GTAGTAATTTCAAAATTTTCCTACGCA 57.385 29.630 0.00 0.00 39.24 5.24
281 282 8.782327 CGTAGTAATTTCAAAATTTTCCTACGC 58.218 33.333 23.29 10.35 41.85 4.42
282 283 9.815936 ACGTAGTAATTTCAAAATTTTCCTACG 57.184 29.630 27.28 27.28 45.94 3.51
285 286 9.687210 GGAACGTAGTAATTTCAAAATTTTCCT 57.313 29.630 14.30 8.59 45.00 3.36
286 287 8.918658 GGGAACGTAGTAATTTCAAAATTTTCC 58.081 33.333 0.00 13.68 45.00 3.13
287 288 8.918658 GGGGAACGTAGTAATTTCAAAATTTTC 58.081 33.333 0.00 3.63 45.00 2.29
288 289 8.422566 TGGGGAACGTAGTAATTTCAAAATTTT 58.577 29.630 6.06 0.00 45.00 1.82
289 290 7.953752 TGGGGAACGTAGTAATTTCAAAATTT 58.046 30.769 6.06 0.00 45.00 1.82
290 291 7.527568 TGGGGAACGTAGTAATTTCAAAATT 57.472 32.000 6.04 6.04 45.00 1.82
291 292 7.014422 TGTTGGGGAACGTAGTAATTTCAAAAT 59.986 33.333 0.00 0.00 45.00 1.82
292 293 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
293 294 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
294 295 5.374921 TGTTGGGGAACGTAGTAATTTCAA 58.625 37.500 0.00 0.00 45.00 2.69
295 296 4.970711 TGTTGGGGAACGTAGTAATTTCA 58.029 39.130 0.00 0.00 45.00 2.69
296 297 4.142752 GCTGTTGGGGAACGTAGTAATTTC 60.143 45.833 0.00 0.00 45.00 2.17
297 298 3.754850 GCTGTTGGGGAACGTAGTAATTT 59.245 43.478 0.00 0.00 45.00 1.82
298 299 3.008704 AGCTGTTGGGGAACGTAGTAATT 59.991 43.478 0.00 0.00 45.00 1.40
299 300 2.570302 AGCTGTTGGGGAACGTAGTAAT 59.430 45.455 0.00 0.00 45.00 1.89
300 301 1.972795 AGCTGTTGGGGAACGTAGTAA 59.027 47.619 0.00 0.00 45.00 2.24
301 302 1.636148 AGCTGTTGGGGAACGTAGTA 58.364 50.000 0.00 0.00 45.00 1.82
303 304 1.804748 GAAAGCTGTTGGGGAACGTAG 59.195 52.381 0.00 0.00 0.00 3.51
304 305 1.418637 AGAAAGCTGTTGGGGAACGTA 59.581 47.619 0.00 0.00 0.00 3.57
305 306 0.182775 AGAAAGCTGTTGGGGAACGT 59.817 50.000 0.00 0.00 0.00 3.99
306 307 1.318576 AAGAAAGCTGTTGGGGAACG 58.681 50.000 0.00 0.00 0.00 3.95
307 308 4.079253 TCATAAGAAAGCTGTTGGGGAAC 58.921 43.478 0.00 0.00 0.00 3.62
308 309 4.380843 TCATAAGAAAGCTGTTGGGGAA 57.619 40.909 0.00 0.00 0.00 3.97
309 310 4.079253 GTTCATAAGAAAGCTGTTGGGGA 58.921 43.478 0.00 0.00 35.08 4.81
310 311 3.119849 CGTTCATAAGAAAGCTGTTGGGG 60.120 47.826 0.00 0.00 35.08 4.96
311 312 3.751175 TCGTTCATAAGAAAGCTGTTGGG 59.249 43.478 0.00 0.00 35.08 4.12
312 313 5.551760 ATCGTTCATAAGAAAGCTGTTGG 57.448 39.130 0.00 0.00 35.08 3.77
313 314 5.284660 GCAATCGTTCATAAGAAAGCTGTTG 59.715 40.000 0.00 0.00 35.08 3.33
314 315 5.048782 TGCAATCGTTCATAAGAAAGCTGTT 60.049 36.000 0.00 0.00 35.08 3.16
315 316 4.455533 TGCAATCGTTCATAAGAAAGCTGT 59.544 37.500 0.00 0.00 35.08 4.40
316 317 4.973396 TGCAATCGTTCATAAGAAAGCTG 58.027 39.130 0.00 0.00 35.08 4.24
350 351 4.613031 GCAAACTGAAAAGCTACAATCGTC 59.387 41.667 0.00 0.00 0.00 4.20
368 369 1.155424 TCAACCGAGACACCGCAAAC 61.155 55.000 0.00 0.00 0.00 2.93
403 404 3.040147 TCGATTCGAAAGCTTCAACCT 57.960 42.857 6.24 0.00 31.06 3.50
665 668 2.241281 TCTTCTCCCCCACGACATAA 57.759 50.000 0.00 0.00 0.00 1.90
740 752 4.212913 GCCCTGCGATCGCTCTCA 62.213 66.667 37.01 18.77 42.51 3.27
789 805 3.473923 AAAGGAAACGTTTACCTCCGA 57.526 42.857 19.65 0.00 33.16 4.55
828 844 6.238374 CCCCTTTTGTATAGTTTAGCACGATG 60.238 42.308 0.00 0.00 0.00 3.84
844 860 5.428184 TTCATTGTTTTGACCCCTTTTGT 57.572 34.783 0.00 0.00 0.00 2.83
862 878 1.133792 CCTACCTCCGGCCAAATTCAT 60.134 52.381 2.24 0.00 0.00 2.57
879 895 1.170442 TGAGTTGCGATCACGACCTA 58.830 50.000 0.00 0.00 42.66 3.08
947 963 5.866633 GCTGCTATAAGATCTACGCTCAATT 59.133 40.000 0.00 0.00 0.00 2.32
965 981 2.427245 GGCGAGAAGAGGGCTGCTA 61.427 63.158 0.00 0.00 26.79 3.49
1015 1031 0.961358 CCTCACCGAGAACCGAGACT 60.961 60.000 0.00 0.00 41.76 3.24
1063 1079 2.041762 AGGAGGGCTCTCATGGCA 59.958 61.111 17.22 0.00 41.69 4.92
1238 1254 0.400213 TCCAAATCAGTGCTCGGGTT 59.600 50.000 0.00 0.00 0.00 4.11
1585 1601 4.201679 CCGCGGATGCCTACGTCA 62.202 66.667 24.07 0.00 38.08 4.35
2132 2148 8.764524 AAGCTACAAACACACTATAGAAGAAG 57.235 34.615 6.78 0.74 0.00 2.85
2328 2345 4.543692 CAAGGAGCAGAACAATTTGTCTG 58.456 43.478 17.45 17.45 32.51 3.51
2384 2401 2.869801 CACAAACTAGCCACTCGAAACA 59.130 45.455 0.00 0.00 0.00 2.83
2389 2406 1.000955 AGTCCACAAACTAGCCACTCG 59.999 52.381 0.00 0.00 0.00 4.18
2410 2427 1.555075 GCTTGTATGTCCCAGACTCCA 59.445 52.381 0.00 0.00 33.15 3.86
2473 2497 4.202182 CCCTTTCCTATCACGATACGGAAA 60.202 45.833 18.96 18.96 37.74 3.13
2753 2875 1.072331 TGGGAACAGAAGGAGAGTTGC 59.928 52.381 0.00 0.00 35.01 4.17
2907 3029 5.528043 TCAATCCTTTAAAAGCACTTGCA 57.472 34.783 3.62 0.00 45.16 4.08
2952 3074 8.753133 CCTTCTGATATCCATAGCAGTATGTTA 58.247 37.037 10.80 0.00 44.68 2.41
2953 3075 7.455953 TCCTTCTGATATCCATAGCAGTATGTT 59.544 37.037 10.80 0.00 44.68 2.71
2954 3076 6.956435 TCCTTCTGATATCCATAGCAGTATGT 59.044 38.462 10.80 0.00 44.68 2.29
2955 3077 7.415592 TCCTTCTGATATCCATAGCAGTATG 57.584 40.000 10.80 1.03 44.68 2.39
2956 3078 8.484575 CAATCCTTCTGATATCCATAGCAGTAT 58.515 37.037 10.80 0.92 44.68 2.12
2957 3079 7.675619 TCAATCCTTCTGATATCCATAGCAGTA 59.324 37.037 10.80 2.21 44.68 2.74
2958 3080 6.499699 TCAATCCTTCTGATATCCATAGCAGT 59.500 38.462 10.80 0.00 44.68 4.40
2959 3081 6.944096 TCAATCCTTCTGATATCCATAGCAG 58.056 40.000 5.62 5.62 45.49 4.24
2960 3082 6.940430 TCAATCCTTCTGATATCCATAGCA 57.060 37.500 0.00 0.00 31.83 3.49
2961 3083 7.930865 GGTATCAATCCTTCTGATATCCATAGC 59.069 40.741 0.00 0.00 37.91 2.97
2962 3084 8.985922 TGGTATCAATCCTTCTGATATCCATAG 58.014 37.037 0.00 0.00 36.46 2.23
2963 3085 8.915813 TGGTATCAATCCTTCTGATATCCATA 57.084 34.615 0.00 0.00 36.46 2.74
3097 3220 5.416952 AGCCAGTCAAGAATAACCTTTCATG 59.583 40.000 0.00 0.00 0.00 3.07
3098 3221 5.574188 AGCCAGTCAAGAATAACCTTTCAT 58.426 37.500 0.00 0.00 0.00 2.57
3968 4099 7.014092 TCCAGCAAATGACATTTTTGTTTTC 57.986 32.000 10.77 0.00 36.63 2.29
3986 4117 3.797353 GGGGGCTCGATTCCAGCA 61.797 66.667 5.63 0.00 38.77 4.41
4035 4166 2.676471 GTTGCCAGCCCGTCCATT 60.676 61.111 0.00 0.00 0.00 3.16
4466 4597 2.226437 TCTGCTTGCATCTTCCGAAAAC 59.774 45.455 0.00 0.00 0.00 2.43
4469 4600 2.408271 ATCTGCTTGCATCTTCCGAA 57.592 45.000 0.00 0.00 0.00 4.30
4486 4617 9.808808 CACGAGATCTCATCATTTTGAAATATC 57.191 33.333 22.31 0.00 0.00 1.63
4564 4695 1.521681 GCTAACTACCTGCCAGCCG 60.522 63.158 0.00 0.00 0.00 5.52
4578 4709 1.078497 CAGTGGCATGACCGGCTAA 60.078 57.895 0.00 0.00 43.94 3.09
4583 4714 1.012086 CAGAATCAGTGGCATGACCG 58.988 55.000 0.00 0.00 43.94 4.79
4591 4722 6.426328 GCTAGATTTCATACCAGAATCAGTGG 59.574 42.308 0.00 0.00 41.30 4.00
4626 4757 2.592194 TGAATAAGCTGTGACGTCGTC 58.408 47.619 18.51 18.51 0.00 4.20
4672 4803 3.708563 ACCAAAATTCGCCCGATAATG 57.291 42.857 0.00 0.00 0.00 1.90
4888 5089 2.651382 ACCAACAAACTCAGGGGTAC 57.349 50.000 0.00 0.00 0.00 3.34
4895 5096 2.610374 GACGTGCTAACCAACAAACTCA 59.390 45.455 0.00 0.00 0.00 3.41
4924 5143 5.139435 TGAGACTGAACTCACCACTAATG 57.861 43.478 0.00 0.00 41.21 1.90
4941 5160 3.503748 CCAAAAATGAGGTGGAGTGAGAC 59.496 47.826 0.00 0.00 34.05 3.36
4962 5182 5.099042 TGCTGGGTTCTAAATAGAAGACC 57.901 43.478 13.21 13.21 42.48 3.85
4986 5250 0.977395 CTCTTCCAAACGAGAGGGGT 59.023 55.000 0.00 0.00 36.58 4.95
5038 5307 6.398234 AGCTATGTAAGTGTAGTCATGAGG 57.602 41.667 0.00 0.00 0.00 3.86
5102 5375 3.906720 TGAGTGGGCTACATAAGTTCC 57.093 47.619 3.15 0.00 0.00 3.62
5154 5427 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
5155 5428 4.482952 ACAAGTATTTAGGAACGGAGGG 57.517 45.455 0.00 0.00 0.00 4.30
5156 5429 6.812879 AAAACAAGTATTTAGGAACGGAGG 57.187 37.500 0.00 0.00 0.00 4.30
5157 5430 8.095937 AGAAAAACAAGTATTTAGGAACGGAG 57.904 34.615 0.00 0.00 0.00 4.63
5158 5431 9.211485 CTAGAAAAACAAGTATTTAGGAACGGA 57.789 33.333 0.00 0.00 0.00 4.69
5159 5432 9.211485 TCTAGAAAAACAAGTATTTAGGAACGG 57.789 33.333 0.00 0.00 0.00 4.44
5171 5444 9.921637 TTTGTTGAAATGTCTAGAAAAACAAGT 57.078 25.926 9.51 0.00 37.51 3.16
5179 5452 9.554395 TGTAGTCATTTGTTGAAATGTCTAGAA 57.446 29.630 11.99 4.88 44.10 2.10
5180 5453 9.725019 ATGTAGTCATTTGTTGAAATGTCTAGA 57.275 29.630 11.99 11.61 44.10 2.43
5183 5456 8.443160 CGTATGTAGTCATTTGTTGAAATGTCT 58.557 33.333 10.61 10.61 45.98 3.41
5184 5457 8.440059 TCGTATGTAGTCATTTGTTGAAATGTC 58.560 33.333 7.25 2.94 45.98 3.06
5185 5458 8.317891 TCGTATGTAGTCATTTGTTGAAATGT 57.682 30.769 7.25 0.00 45.98 2.71
5186 5459 9.265938 CTTCGTATGTAGTCATTTGTTGAAATG 57.734 33.333 0.00 0.00 46.84 2.32
5187 5460 7.962918 GCTTCGTATGTAGTCATTTGTTGAAAT 59.037 33.333 0.00 0.00 35.70 2.17
5188 5461 7.041712 TGCTTCGTATGTAGTCATTTGTTGAAA 60.042 33.333 0.00 0.00 35.70 2.69
5189 5462 6.425417 TGCTTCGTATGTAGTCATTTGTTGAA 59.575 34.615 0.00 0.00 35.70 2.69
5190 5463 5.929415 TGCTTCGTATGTAGTCATTTGTTGA 59.071 36.000 0.00 0.00 35.70 3.18
5191 5464 6.164408 TGCTTCGTATGTAGTCATTTGTTG 57.836 37.500 0.00 0.00 35.70 3.33
5192 5465 6.795098 TTGCTTCGTATGTAGTCATTTGTT 57.205 33.333 0.00 0.00 35.70 2.83
5193 5466 6.795098 TTTGCTTCGTATGTAGTCATTTGT 57.205 33.333 0.00 0.00 35.70 2.83
5194 5467 7.962373 TCATTTTGCTTCGTATGTAGTCATTTG 59.038 33.333 0.00 0.00 35.70 2.32
5195 5468 8.039603 TCATTTTGCTTCGTATGTAGTCATTT 57.960 30.769 0.00 0.00 35.70 2.32
5196 5469 7.334421 ACTCATTTTGCTTCGTATGTAGTCATT 59.666 33.333 0.00 0.00 35.70 2.57
5197 5470 6.818644 ACTCATTTTGCTTCGTATGTAGTCAT 59.181 34.615 0.00 0.00 38.00 3.06
5198 5471 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
5199 5472 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
5200 5473 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
5201 5474 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
5202 5475 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
5203 5476 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
5204 5477 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
5205 5478 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
5206 5479 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
5207 5480 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
5208 5481 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
5209 5482 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
5230 5503 9.561270 CGGATGTATGTAGACATATTTAGAGTG 57.439 37.037 5.69 0.00 40.18 3.51
5231 5504 9.298250 ACGGATGTATGTAGACATATTTAGAGT 57.702 33.333 5.69 1.27 40.18 3.24
5248 5521 9.074576 TCAAATGACTACTACATACGGATGTAT 57.925 33.333 20.64 13.02 45.42 2.29
5249 5522 8.454570 TCAAATGACTACTACATACGGATGTA 57.545 34.615 19.32 19.32 44.77 2.29
5251 5524 8.642908 TTTCAAATGACTACTACATACGGATG 57.357 34.615 5.94 5.94 39.16 3.51
5252 5525 9.261180 CATTTCAAATGACTACTACATACGGAT 57.739 33.333 3.82 0.00 0.00 4.18
5253 5526 8.255206 ACATTTCAAATGACTACTACATACGGA 58.745 33.333 17.30 0.00 0.00 4.69
5254 5527 8.420374 ACATTTCAAATGACTACTACATACGG 57.580 34.615 17.30 0.00 0.00 4.02
5282 5555 8.947115 CCTCCGTTTCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
5283 5556 8.182227 CCCTCCGTTTCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
5284 5557 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
5285 5558 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
5286 5559 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
5287 5560 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
5288 5561 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
5289 5562 7.767198 TGTACTCCCTCCGTTTCTAAATATTTG 59.233 37.037 11.05 1.65 0.00 2.32
5290 5563 7.854337 TGTACTCCCTCCGTTTCTAAATATTT 58.146 34.615 5.89 5.89 0.00 1.40
5291 5564 7.427989 TGTACTCCCTCCGTTTCTAAATATT 57.572 36.000 0.00 0.00 0.00 1.28
5292 5565 7.289317 TCATGTACTCCCTCCGTTTCTAAATAT 59.711 37.037 0.00 0.00 0.00 1.28
5293 5566 6.608405 TCATGTACTCCCTCCGTTTCTAAATA 59.392 38.462 0.00 0.00 0.00 1.40
5294 5567 5.424252 TCATGTACTCCCTCCGTTTCTAAAT 59.576 40.000 0.00 0.00 0.00 1.40
5295 5568 4.773674 TCATGTACTCCCTCCGTTTCTAAA 59.226 41.667 0.00 0.00 0.00 1.85
5296 5569 4.159135 GTCATGTACTCCCTCCGTTTCTAA 59.841 45.833 0.00 0.00 0.00 2.10
5297 5570 3.698040 GTCATGTACTCCCTCCGTTTCTA 59.302 47.826 0.00 0.00 0.00 2.10
5298 5571 2.496470 GTCATGTACTCCCTCCGTTTCT 59.504 50.000 0.00 0.00 0.00 2.52
5299 5572 2.232941 TGTCATGTACTCCCTCCGTTTC 59.767 50.000 0.00 0.00 0.00 2.78
5300 5573 2.253610 TGTCATGTACTCCCTCCGTTT 58.746 47.619 0.00 0.00 0.00 3.60
5301 5574 1.933021 TGTCATGTACTCCCTCCGTT 58.067 50.000 0.00 0.00 0.00 4.44
5302 5575 1.933021 TTGTCATGTACTCCCTCCGT 58.067 50.000 0.00 0.00 0.00 4.69
5303 5576 3.383505 TGTATTGTCATGTACTCCCTCCG 59.616 47.826 0.00 0.00 0.00 4.63
5304 5577 5.552870 ATGTATTGTCATGTACTCCCTCC 57.447 43.478 0.00 0.00 0.00 4.30
5305 5578 7.291411 ACTATGTATTGTCATGTACTCCCTC 57.709 40.000 0.00 0.00 0.00 4.30
5306 5579 7.676683 AACTATGTATTGTCATGTACTCCCT 57.323 36.000 0.00 0.00 0.00 4.20
5307 5580 8.732746 AAAACTATGTATTGTCATGTACTCCC 57.267 34.615 0.00 0.00 0.00 4.30
5310 5583 9.309516 CGGTAAAACTATGTATTGTCATGTACT 57.690 33.333 0.00 0.00 0.00 2.73
5337 5612 3.367646 TTGACTGGGTGGTTTGTGTTA 57.632 42.857 0.00 0.00 0.00 2.41
5338 5613 2.223803 TTGACTGGGTGGTTTGTGTT 57.776 45.000 0.00 0.00 0.00 3.32
5349 5624 0.105964 TAATCGGCGGATTGACTGGG 59.894 55.000 25.04 0.00 42.72 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.