Multiple sequence alignment - TraesCS6A01G219500
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS6A01G219500
chr6A
100.000
3167
0
0
1
3167
407084609
407087775
0.000000e+00
5849
1
TraesCS6A01G219500
chr6D
94.332
2558
114
18
1
2547
285868739
285871276
0.000000e+00
3892
2
TraesCS6A01G219500
chr6D
90.939
309
24
3
2729
3035
285871869
285872175
2.270000e-111
412
3
TraesCS6A01G219500
chr6D
91.736
121
8
1
2547
2665
285871522
285871642
1.950000e-37
167
4
TraesCS6A01G219500
chr6B
94.108
2563
130
14
1
2554
446835280
446837830
0.000000e+00
3877
5
TraesCS6A01G219500
chr6B
89.706
408
22
9
2761
3163
446838365
446838757
1.310000e-138
503
6
TraesCS6A01G219500
chr2D
80.862
998
175
15
1009
1998
451287829
451288818
0.000000e+00
771
7
TraesCS6A01G219500
chr2D
82.877
146
18
4
603
747
451287397
451287536
1.190000e-24
124
8
TraesCS6A01G219500
chr2B
80.704
995
182
8
1009
1998
531466730
531467719
0.000000e+00
765
9
TraesCS6A01G219500
chr2B
82.877
146
18
4
603
747
531466328
531466467
1.190000e-24
124
10
TraesCS6A01G219500
chr2B
78.889
180
28
10
2894
3066
550809232
550809056
2.580000e-21
113
11
TraesCS6A01G219500
chr5A
76.667
150
25
7
2899
3042
306496094
306495949
1.220000e-09
75
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS6A01G219500
chr6A
407084609
407087775
3166
False
5849.000000
5849
100.000000
1
3167
1
chr6A.!!$F1
3166
1
TraesCS6A01G219500
chr6D
285868739
285872175
3436
False
1490.333333
3892
92.335667
1
3035
3
chr6D.!!$F1
3034
2
TraesCS6A01G219500
chr6B
446835280
446838757
3477
False
2190.000000
3877
91.907000
1
3163
2
chr6B.!!$F1
3162
3
TraesCS6A01G219500
chr2D
451287397
451288818
1421
False
447.500000
771
81.869500
603
1998
2
chr2D.!!$F1
1395
4
TraesCS6A01G219500
chr2B
531466328
531467719
1391
False
444.500000
765
81.790500
603
1998
2
chr2B.!!$F1
1395
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
136
138
0.175073
GGTAGGCGTCTTTGATCCGT
59.825
55.0
0.0
0.0
0.00
4.69
F
1600
1653
0.252479
CAAGACCTCTGCTGATGGCT
59.748
55.0
0.0
0.0
42.39
4.75
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2056
2109
1.002033
GCCGCTCTCTAAATTGCCATG
60.002
52.381
0.00
0.0
0.00
3.66
R
2718
3166
0.107459
GGTCGACGACCCTAGTACCT
60.107
60.000
32.51
0.0
46.19
3.08
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
34
35
0.313043
TCGAGGTTTGTGACGAGGAC
59.687
55.000
0.00
0.00
0.00
3.85
36
37
0.313043
GAGGTTTGTGACGAGGACGA
59.687
55.000
0.00
0.00
42.66
4.20
37
38
0.314302
AGGTTTGTGACGAGGACGAG
59.686
55.000
0.00
0.00
42.66
4.18
38
39
1.282930
GGTTTGTGACGAGGACGAGC
61.283
60.000
0.00
0.00
42.66
5.03
118
120
4.631377
TCAGCTCATGTTGTTTCTATTCGG
59.369
41.667
0.00
0.00
0.00
4.30
122
124
5.006746
GCTCATGTTGTTTCTATTCGGTAGG
59.993
44.000
0.00
0.00
0.00
3.18
124
126
3.255725
TGTTGTTTCTATTCGGTAGGCG
58.744
45.455
0.00
0.00
0.00
5.52
129
131
4.179298
GTTTCTATTCGGTAGGCGTCTTT
58.821
43.478
0.00
0.00
0.00
2.52
136
138
0.175073
GGTAGGCGTCTTTGATCCGT
59.825
55.000
0.00
0.00
0.00
4.69
152
154
7.747155
TTGATCCGTGGTAGAAATTTGTTTA
57.253
32.000
0.00
0.00
0.00
2.01
174
176
5.017093
ACTGTGCCTAGTAGGGATCATAT
57.983
43.478
18.13
5.24
38.26
1.78
184
186
6.749036
AGTAGGGATCATATTCCTTTTCGT
57.251
37.500
0.00
0.00
35.97
3.85
189
191
3.899052
TCATATTCCTTTTCGTCCCGT
57.101
42.857
0.00
0.00
0.00
5.28
191
193
5.341872
TCATATTCCTTTTCGTCCCGTTA
57.658
39.130
0.00
0.00
0.00
3.18
194
196
6.824704
TCATATTCCTTTTCGTCCCGTTAATT
59.175
34.615
0.00
0.00
0.00
1.40
195
197
7.986320
TCATATTCCTTTTCGTCCCGTTAATTA
59.014
33.333
0.00
0.00
0.00
1.40
222
224
6.910972
GCTGGATAGGAAAAGTAAATAAACGC
59.089
38.462
0.00
0.00
0.00
4.84
360
362
3.700538
TGGCTGACCTGAATATTGCTTT
58.299
40.909
0.00
0.00
36.63
3.51
379
381
9.722056
ATTGCTTTATGTCAATTCGTTTCTATC
57.278
29.630
0.00
0.00
29.34
2.08
388
390
7.765819
TGTCAATTCGTTTCTATCTCATGATGT
59.234
33.333
0.00
0.00
34.32
3.06
417
425
3.633986
CCCTTTCTGTTATGCCTGGAATC
59.366
47.826
0.00
0.00
0.00
2.52
418
426
4.530875
CCTTTCTGTTATGCCTGGAATCT
58.469
43.478
0.00
0.00
0.00
2.40
445
453
7.439356
TCATCTTCAAATCAGGTCGAATATCAC
59.561
37.037
0.00
0.00
0.00
3.06
446
454
6.049149
TCTTCAAATCAGGTCGAATATCACC
58.951
40.000
0.00
0.00
0.00
4.02
500
508
9.998106
GAAATATTCCTCTACTTTATGTGCCTA
57.002
33.333
0.00
0.00
0.00
3.93
539
548
7.123847
TCCCAGAAGGATGTTAGTACTACTTTC
59.876
40.741
0.91
3.82
40.93
2.62
556
565
8.004087
ACTACTTTCTACCTCGCAATATGTTA
57.996
34.615
0.00
0.00
0.00
2.41
560
569
7.224753
ACTTTCTACCTCGCAATATGTTATGTG
59.775
37.037
0.00
0.00
0.00
3.21
582
592
4.873827
TGCTTCATCGTTTCTAACCCATAC
59.126
41.667
0.00
0.00
0.00
2.39
781
796
7.062957
TCAATTGAGTTCCTCCTTTCTTTTCT
58.937
34.615
3.38
0.00
0.00
2.52
880
895
0.389166
CCTGATAATCCCTCTCGCGC
60.389
60.000
0.00
0.00
0.00
6.86
908
923
6.779539
CCATCCTAATTGCTTAGAATTCCCTT
59.220
38.462
0.65
0.00
37.16
3.95
910
925
7.213178
TCCTAATTGCTTAGAATTCCCTTCT
57.787
36.000
0.65
0.00
46.16
2.85
911
926
7.056635
TCCTAATTGCTTAGAATTCCCTTCTG
58.943
38.462
0.65
0.00
44.12
3.02
975
999
1.538950
CTCTGACCAGCAAAGCCTTTC
59.461
52.381
0.00
0.00
0.00
2.62
994
1041
3.103080
TCCTCCTCTACCAACCTTCTC
57.897
52.381
0.00
0.00
0.00
2.87
1170
1223
3.181467
GCACCATTGTATCTGAGCTCTCT
60.181
47.826
16.19
1.88
0.00
3.10
1176
1229
6.867816
CCATTGTATCTGAGCTCTCTAATGAC
59.132
42.308
16.19
4.71
0.00
3.06
1180
1233
6.830838
TGTATCTGAGCTCTCTAATGACAAGA
59.169
38.462
16.19
5.41
0.00
3.02
1197
1250
5.000012
ACAAGATTGACTCGTATGTCCTC
58.000
43.478
0.00
0.00
36.21
3.71
1252
1305
0.396435
TGTGATCAAGACCTGCGGTT
59.604
50.000
0.00
0.00
35.25
4.44
1253
1306
1.621317
TGTGATCAAGACCTGCGGTTA
59.379
47.619
0.00
0.00
35.25
2.85
1303
1356
1.346062
TCTTGAGCTTGCTGAGGAGT
58.654
50.000
0.00
0.00
0.00
3.85
1392
1445
4.590647
TCTCCACACAAGAACTTCTCTGAT
59.409
41.667
0.00
0.00
33.37
2.90
1600
1653
0.252479
CAAGACCTCTGCTGATGGCT
59.748
55.000
0.00
0.00
42.39
4.75
1746
1799
4.330250
CTTTCTCCACCATTCATGTCACT
58.670
43.478
0.00
0.00
0.00
3.41
1892
1945
2.331893
CCATCTTTGGCGGTCGCAA
61.332
57.895
17.21
2.52
44.11
4.85
2046
2099
3.330267
GTCACCAAGATCTGTCCTGAAC
58.670
50.000
0.00
0.00
0.00
3.18
2056
2109
1.261619
CTGTCCTGAACTGCAACGTTC
59.738
52.381
10.98
10.98
42.73
3.95
2162
2215
3.870419
GCTGTTAAGAGGATGAAGAGCTG
59.130
47.826
1.31
0.00
36.74
4.24
2189
2242
2.275318
GTGATGCTAGCTGGTCTGAAC
58.725
52.381
17.23
3.02
0.00
3.18
2220
2273
4.270084
TGTTGCGTCAGTTTGTTCTTAGAG
59.730
41.667
0.00
0.00
0.00
2.43
2221
2274
4.316205
TGCGTCAGTTTGTTCTTAGAGA
57.684
40.909
0.00
0.00
0.00
3.10
2229
2286
7.442666
GTCAGTTTGTTCTTAGAGATTTCCTGT
59.557
37.037
0.00
0.00
0.00
4.00
2245
2302
6.697641
TTTCCTGTTCCTGTCCTATTACTT
57.302
37.500
0.00
0.00
0.00
2.24
2318
2375
3.548818
GCGAATGTATGGAAATGCCTGTC
60.549
47.826
0.00
0.00
37.63
3.51
2404
2462
9.744468
TTATTTCCTGAAAGTTTTGTTAGAAGC
57.256
29.630
0.00
0.00
33.32
3.86
2435
2495
3.192844
TCTGTCGTGGACCTATTGAACTC
59.807
47.826
0.00
0.00
0.00
3.01
2452
2512
3.176552
ACTCTGGCGAATCTGATTCAG
57.823
47.619
25.32
19.18
39.22
3.02
2465
2525
2.349590
TGATTCAGTTCTGATGGTGCG
58.650
47.619
3.28
0.00
0.00
5.34
2481
2541
0.611618
TGCGGAGGTTCGGGTACTAA
60.612
55.000
0.00
0.00
0.00
2.24
2483
2543
1.537562
GCGGAGGTTCGGGTACTAATG
60.538
57.143
0.00
0.00
0.00
1.90
2485
2545
1.761198
GGAGGTTCGGGTACTAATGCT
59.239
52.381
0.00
0.00
0.00
3.79
2555
2951
3.201290
CTCGATAAGAAAGCCATGCAGT
58.799
45.455
0.00
0.00
0.00
4.40
2668
3116
2.376518
AGAACCCTCAAGCCATCAGAAA
59.623
45.455
0.00
0.00
0.00
2.52
2702
3150
0.542938
GCCCAAAGAAAGGCCCTCTT
60.543
55.000
11.16
11.16
43.76
2.85
2718
3166
5.006386
GCCCTCTTGATCTTCTCAAAAGAA
58.994
41.667
0.00
0.00
43.20
2.52
2747
3308
1.007734
TCGTCGACCACTGCTGTTC
60.008
57.895
10.58
0.00
0.00
3.18
2759
3320
0.392706
TGCTGTTCCGCTCTTTCAGA
59.607
50.000
0.00
0.00
0.00
3.27
2807
3368
8.854117
AGGCATGTATATCAAATCCTCTTTTTC
58.146
33.333
0.00
0.00
0.00
2.29
2835
3398
1.556911
TCTCTCCCTGCTGAATTGTCC
59.443
52.381
0.00
0.00
0.00
4.02
2873
3436
4.820173
CCATATCAGAACTGCATGTCATGT
59.180
41.667
14.26
0.00
0.00
3.21
2880
3443
2.004733
ACTGCATGTCATGTCATGTCG
58.995
47.619
26.51
20.78
44.68
4.35
2881
3444
2.004733
CTGCATGTCATGTCATGTCGT
58.995
47.619
26.51
5.88
44.68
4.34
2882
3445
2.417586
CTGCATGTCATGTCATGTCGTT
59.582
45.455
26.51
0.00
44.68
3.85
2996
3559
5.152623
TGACTTGTAGAAATGGACTCCTG
57.847
43.478
0.00
0.00
0.00
3.86
3095
3658
8.768957
ATGAATCAAATGGTATCTGAGATACG
57.231
34.615
22.32
11.10
0.00
3.06
3115
3681
4.894784
ACGTGTCATTTCACTTCCTATGT
58.105
39.130
0.00
0.00
36.33
2.29
3116
3682
5.305585
ACGTGTCATTTCACTTCCTATGTT
58.694
37.500
0.00
0.00
36.33
2.71
3166
3734
5.805728
CTCTAAACCAAAAGAGGCCTAAGA
58.194
41.667
4.42
0.00
36.41
2.10
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
34
35
2.854214
GCGTCGAATCTGCTGCTCG
61.854
63.158
0.00
1.57
0.00
5.03
36
37
2.882777
CGCGTCGAATCTGCTGCT
60.883
61.111
0.00
0.00
0.00
4.24
37
38
4.565704
GCGCGTCGAATCTGCTGC
62.566
66.667
8.43
0.00
0.00
5.25
38
39
4.257376
CGCGCGTCGAATCTGCTG
62.257
66.667
24.19
0.00
41.67
4.41
118
120
1.278238
CACGGATCAAAGACGCCTAC
58.722
55.000
0.00
0.00
0.00
3.18
122
124
1.135199
TCTACCACGGATCAAAGACGC
60.135
52.381
0.00
0.00
0.00
5.19
124
126
6.072673
ACAAATTTCTACCACGGATCAAAGAC
60.073
38.462
0.00
0.00
0.00
3.01
129
131
6.938030
AGTAAACAAATTTCTACCACGGATCA
59.062
34.615
0.00
0.00
0.00
2.92
136
138
5.830991
AGGCACAGTAAACAAATTTCTACCA
59.169
36.000
0.00
0.00
0.00
3.25
152
154
2.848678
TGATCCCTACTAGGCACAGT
57.151
50.000
0.00
0.00
32.73
3.55
184
186
3.581332
CCTATCCAGCCTAATTAACGGGA
59.419
47.826
8.74
8.74
32.15
5.14
194
196
9.623000
GTTTATTTACTTTTCCTATCCAGCCTA
57.377
33.333
0.00
0.00
0.00
3.93
195
197
7.282450
CGTTTATTTACTTTTCCTATCCAGCCT
59.718
37.037
0.00
0.00
0.00
4.58
222
224
8.074370
TGAAATTACAGATAATCTAGACGACGG
58.926
37.037
0.00
0.00
30.27
4.79
360
362
9.987272
ATCATGAGATAGAAACGAATTGACATA
57.013
29.630
0.09
0.00
31.14
2.29
379
381
5.125097
CAGAAAGGGAGGAAAACATCATGAG
59.875
44.000
0.09
0.00
0.00
2.90
388
390
4.086457
GGCATAACAGAAAGGGAGGAAAA
58.914
43.478
0.00
0.00
0.00
2.29
417
425
6.674694
ATTCGACCTGATTTGAAGATGAAG
57.325
37.500
0.00
0.00
0.00
3.02
418
426
7.986889
TGATATTCGACCTGATTTGAAGATGAA
59.013
33.333
0.00
0.00
0.00
2.57
473
481
8.494433
AGGCACATAAAGTAGAGGAATATTTCA
58.506
33.333
0.00
0.00
0.00
2.69
496
504
2.026262
TGGGATTCCAGTTTCACTAGGC
60.026
50.000
4.80
0.00
38.32
3.93
525
534
6.428385
TGCGAGGTAGAAAGTAGTACTAAC
57.572
41.667
3.61
0.00
0.00
2.34
539
548
4.991056
AGCACATAACATATTGCGAGGTAG
59.009
41.667
0.00
0.00
40.04
3.18
556
565
3.689649
GGGTTAGAAACGATGAAGCACAT
59.310
43.478
0.00
0.00
42.47
3.21
560
569
4.272748
GGTATGGGTTAGAAACGATGAAGC
59.727
45.833
0.00
0.00
0.00
3.86
582
592
1.962807
TCAAATTCTGCAGTGGGTTGG
59.037
47.619
14.67
2.75
0.00
3.77
880
895
4.453480
TTCTAAGCAATTAGGATGGGGG
57.547
45.455
0.00
0.00
0.00
5.40
908
923
8.408043
TTTTAGGAAGATGAATTGAAAGCAGA
57.592
30.769
0.00
0.00
0.00
4.26
975
999
2.821437
TGAGAAGGTTGGTAGAGGAGG
58.179
52.381
0.00
0.00
0.00
4.30
994
1041
0.109597
GCAGAGACGGCCATTGTTTG
60.110
55.000
2.24
0.00
0.00
2.93
1170
1223
6.978659
GGACATACGAGTCAATCTTGTCATTA
59.021
38.462
0.00
0.00
40.81
1.90
1176
1229
5.067153
AGAGAGGACATACGAGTCAATCTTG
59.933
44.000
0.00
0.00
40.29
3.02
1180
1233
4.527944
TCAGAGAGGACATACGAGTCAAT
58.472
43.478
0.00
0.00
40.29
2.57
1197
1250
5.026038
AGATGAAGAGGCTTGATTCAGAG
57.974
43.478
13.69
0.00
36.47
3.35
1392
1445
1.272092
CCATTCAGGAAGGCAACCTCA
60.272
52.381
0.00
0.00
41.22
3.86
1746
1799
2.650116
GCTGAAGCCGTCCTCAGGA
61.650
63.158
0.00
0.00
34.31
3.86
1892
1945
4.290622
CCCAGGTGCCAGCAAGGT
62.291
66.667
0.00
0.00
40.61
3.50
2046
2099
2.068837
AATTGCCATGAACGTTGCAG
57.931
45.000
5.00
0.00
34.81
4.41
2056
2109
1.002033
GCCGCTCTCTAAATTGCCATG
60.002
52.381
0.00
0.00
0.00
3.66
2144
2197
3.771479
TCAGCAGCTCTTCATCCTCTTAA
59.229
43.478
0.00
0.00
0.00
1.85
2150
2203
1.134159
ACCATCAGCAGCTCTTCATCC
60.134
52.381
0.00
0.00
0.00
3.51
2162
2215
1.227639
CAGCTAGCATCACCATCAGC
58.772
55.000
18.83
0.00
0.00
4.26
2189
2242
1.202568
CTGACGCAACACAAGCTCG
59.797
57.895
0.00
0.00
0.00
5.03
2220
2273
6.890293
AGTAATAGGACAGGAACAGGAAATC
58.110
40.000
0.00
0.00
0.00
2.17
2221
2274
6.893020
AGTAATAGGACAGGAACAGGAAAT
57.107
37.500
0.00
0.00
0.00
2.17
2229
2286
8.607713
TCCATAACAAAAGTAATAGGACAGGAA
58.392
33.333
0.00
0.00
0.00
3.36
2245
2302
4.443621
TCACGTCACTTGTCCATAACAAA
58.556
39.130
0.00
0.00
46.95
2.83
2318
2375
2.646930
TCATAAACCATGCAGCCAGAG
58.353
47.619
0.00
0.00
34.35
3.35
2404
2462
2.069273
GTCCACGACAGACAAGAATGG
58.931
52.381
0.00
0.00
34.27
3.16
2435
2495
3.309138
CAGAACTGAATCAGATTCGCCAG
59.691
47.826
18.20
12.25
42.15
4.85
2452
2512
0.321653
AACCTCCGCACCATCAGAAC
60.322
55.000
0.00
0.00
0.00
3.01
2465
2525
1.761198
AGCATTAGTACCCGAACCTCC
59.239
52.381
0.00
0.00
0.00
4.30
2481
2541
3.065786
CGAATAATCACCACAAGCAGCAT
59.934
43.478
0.00
0.00
0.00
3.79
2483
2543
2.677836
TCGAATAATCACCACAAGCAGC
59.322
45.455
0.00
0.00
0.00
5.25
2485
2545
6.345298
TCTTATCGAATAATCACCACAAGCA
58.655
36.000
0.00
0.00
0.00
3.91
2555
2951
0.330941
TATGCAGCCACCACCATCAA
59.669
50.000
0.00
0.00
0.00
2.57
2614
3010
5.582689
AATATGCCAGAGCTTTGGTTAAC
57.417
39.130
23.28
8.25
40.49
2.01
2654
3052
4.698780
CAGACAAGATTTCTGATGGCTTGA
59.301
41.667
15.92
0.00
42.81
3.02
2668
3116
1.067295
TGGGCAGGTTCAGACAAGAT
58.933
50.000
0.00
0.00
0.00
2.40
2702
3150
7.093289
CCCTAGTACCTTCTTTTGAGAAGATCA
60.093
40.741
15.71
0.60
45.93
2.92
2718
3166
0.107459
GGTCGACGACCCTAGTACCT
60.107
60.000
32.51
0.00
46.19
3.08
2741
3302
3.217242
TCTGAAAGAGCGGAACAGC
57.783
52.632
0.00
0.00
38.67
4.40
2807
3368
1.413445
CAGCAGGGAGAGAATGGAGAG
59.587
57.143
0.00
0.00
0.00
3.20
2811
3374
2.950309
CAATTCAGCAGGGAGAGAATGG
59.050
50.000
0.00
0.00
31.58
3.16
2835
3398
1.434555
TATGGTCGTTGAGGTTTGCG
58.565
50.000
0.00
0.00
0.00
4.85
2873
3436
6.128391
GCCTAAAATTCTACACAACGACATGA
60.128
38.462
0.00
0.00
0.00
3.07
2880
3443
5.254115
AGGAGGCCTAAAATTCTACACAAC
58.746
41.667
4.42
0.00
28.47
3.32
2881
3444
5.514500
AGGAGGCCTAAAATTCTACACAA
57.486
39.130
4.42
0.00
28.47
3.33
2882
3445
5.514500
AAGGAGGCCTAAAATTCTACACA
57.486
39.130
4.42
0.00
31.13
3.72
2964
3527
6.205464
CCATTTCTACAAGTCAAAGAGCTTCA
59.795
38.462
0.00
0.00
0.00
3.02
3094
3657
5.862924
AACATAGGAAGTGAAATGACACG
57.137
39.130
0.00
0.00
44.35
4.49
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.