Multiple sequence alignment - TraesCS6A01G217600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G217600 chr6A 100.000 7565 0 0 1 7565 400130373 400122809 0.000000e+00 13971.0
1 TraesCS6A01G217600 chr6A 79.070 86 12 6 2131 2214 263872886 263872805 4.000000e-03 54.7
2 TraesCS6A01G217600 chr6B 96.176 4759 125 18 2843 7565 439406424 439401687 0.000000e+00 7727.0
3 TraesCS6A01G217600 chr6B 81.967 610 51 20 1533 2131 696411107 696411668 5.350000e-126 462.0
4 TraesCS6A01G217600 chr6B 96.000 100 2 1 2220 2319 696411723 696411820 2.180000e-35 161.0
5 TraesCS6A01G217600 chr6B 91.304 115 10 0 208 322 94585362 94585248 2.830000e-34 158.0
6 TraesCS6A01G217600 chr6D 97.106 4146 92 5 3440 7565 277675921 277671784 0.000000e+00 6966.0
7 TraesCS6A01G217600 chr6D 89.981 2066 111 40 769 2783 277678703 277676683 0.000000e+00 2580.0
8 TraesCS6A01G217600 chr6D 92.754 690 32 6 2780 3453 277676645 277675958 0.000000e+00 981.0
9 TraesCS6A01G217600 chr6D 94.458 415 20 2 356 768 2099369 2098956 2.980000e-178 636.0
10 TraesCS6A01G217600 chr6D 88.462 78 5 4 2130 2207 451854833 451854906 2.910000e-14 91.6
11 TraesCS6A01G217600 chr6D 86.364 66 9 0 143 208 277678785 277678720 1.050000e-08 73.1
12 TraesCS6A01G217600 chr6D 95.238 42 2 0 45 86 277678857 277678816 4.900000e-07 67.6
13 TraesCS6A01G217600 chr6D 96.774 31 1 0 1666 1696 372786950 372786980 1.400000e-02 52.8
14 TraesCS6A01G217600 chrUn 94.686 414 20 2 356 768 91571305 91570893 6.400000e-180 641.0
15 TraesCS6A01G217600 chrUn 95.556 45 2 0 2 46 13405642 13405598 1.050000e-08 73.1
16 TraesCS6A01G217600 chrUn 95.556 45 2 0 2 46 378591287 378591243 1.050000e-08 73.1
17 TraesCS6A01G217600 chrUn 95.556 45 2 0 2 46 378633127 378633171 1.050000e-08 73.1
18 TraesCS6A01G217600 chrUn 95.556 45 2 0 2 46 378661274 378661230 1.050000e-08 73.1
19 TraesCS6A01G217600 chr7B 94.203 414 22 2 356 769 610350956 610351367 1.390000e-176 630.0
20 TraesCS6A01G217600 chr7B 86.842 114 15 0 208 321 711078994 711079107 2.220000e-25 128.0
21 TraesCS6A01G217600 chr1D 93.990 416 21 4 355 768 213550865 213551278 1.790000e-175 627.0
22 TraesCS6A01G217600 chr1D 93.750 416 20 5 356 769 161030976 161031387 3.000000e-173 619.0
23 TraesCS6A01G217600 chr1D 94.737 38 2 0 2132 2169 493221603 493221640 8.200000e-05 60.2
24 TraesCS6A01G217600 chr1D 94.595 37 2 0 2133 2169 22557828 22557792 2.950000e-04 58.4
25 TraesCS6A01G217600 chr1D 92.105 38 3 0 2140 2177 257002324 257002287 4.000000e-03 54.7
26 TraesCS6A01G217600 chr7D 93.961 414 21 2 355 768 76612427 76612836 2.320000e-174 623.0
27 TraesCS6A01G217600 chr5A 93.735 415 24 2 355 768 534898975 534899388 8.340000e-174 621.0
28 TraesCS6A01G217600 chr4A 93.301 418 23 4 356 770 494069648 494070063 5.020000e-171 612.0
29 TraesCS6A01G217600 chr4A 95.122 41 2 0 1 41 545199709 545199669 1.760000e-06 65.8
30 TraesCS6A01G217600 chr3A 93.269 416 27 1 355 770 745462225 745462639 5.020000e-171 612.0
31 TraesCS6A01G217600 chr3A 94.737 114 6 0 208 321 634072151 634072264 2.170000e-40 178.0
32 TraesCS6A01G217600 chr3A 97.436 39 1 0 2 40 728396396 728396434 4.900000e-07 67.6
33 TraesCS6A01G217600 chr2B 90.517 116 11 0 208 323 19622586 19622471 3.660000e-33 154.0
34 TraesCS6A01G217600 chr2B 88.889 108 12 0 214 321 19847753 19847646 4.760000e-27 134.0
35 TraesCS6A01G217600 chr2B 88.073 109 13 0 214 322 666487450 666487342 6.160000e-26 130.0
36 TraesCS6A01G217600 chr3B 87.719 114 14 0 208 321 744372019 744372132 4.760000e-27 134.0
37 TraesCS6A01G217600 chr5B 87.963 108 13 0 214 321 492157562 492157455 2.220000e-25 128.0
38 TraesCS6A01G217600 chr5D 86.607 112 15 0 209 320 70665526 70665415 2.870000e-24 124.0
39 TraesCS6A01G217600 chr1B 88.312 77 8 1 2139 2214 156850363 156850439 2.910000e-14 91.6
40 TraesCS6A01G217600 chr1B 92.500 40 3 0 2142 2181 6869207 6869168 2.950000e-04 58.4
41 TraesCS6A01G217600 chr2D 85.135 74 10 1 2135 2208 482662640 482662712 2.930000e-09 75.0
42 TraesCS6A01G217600 chr2A 97.500 40 1 0 1 40 26383560 26383521 1.360000e-07 69.4
43 TraesCS6A01G217600 chr2A 93.478 46 2 1 2 47 721804184 721804140 4.900000e-07 67.6
44 TraesCS6A01G217600 chr1A 97.436 39 1 0 2 40 117182521 117182483 4.900000e-07 67.6
45 TraesCS6A01G217600 chr7A 94.595 37 2 0 2139 2175 95805224 95805260 2.950000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G217600 chr6A 400122809 400130373 7564 True 13971.00 13971 100.0000 1 7565 1 chr6A.!!$R2 7564
1 TraesCS6A01G217600 chr6B 439401687 439406424 4737 True 7727.00 7727 96.1760 2843 7565 1 chr6B.!!$R2 4722
2 TraesCS6A01G217600 chr6B 696411107 696411820 713 False 311.50 462 88.9835 1533 2319 2 chr6B.!!$F1 786
3 TraesCS6A01G217600 chr6D 277671784 277678857 7073 True 2133.54 6966 92.2886 45 7565 5 chr6D.!!$R2 7520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
352 370 0.038435 TTTGCACCCATGTGATTGCG 60.038 50.000 0.00 0.00 45.76 4.85 F
395 413 0.040157 CACCTTTGCATGTCACCGTG 60.040 55.000 0.00 0.00 0.00 4.94 F
397 415 0.040157 CCTTTGCATGTCACCGTGTG 60.040 55.000 0.00 0.00 34.45 3.82 F
981 999 0.108585 TTGCTTCCCTCACAGGTCAC 59.891 55.000 0.00 0.00 31.93 3.67 F
1185 1203 0.180642 AGAGCTATGACCGAGACCGA 59.819 55.000 0.00 0.00 38.22 4.69 F
2443 2503 0.249398 AGTAGTACTGGCCGGCTTTG 59.751 55.000 28.56 18.45 0.00 2.77 F
3532 3714 0.321671 TGGAGAGGTCTTTCTTGCGG 59.678 55.000 0.00 0.00 0.00 5.69 F
4248 4431 4.084745 TCGATGTGTACGCTTTCTGAAAAC 60.085 41.667 8.10 0.00 0.00 2.43 F
4861 5052 0.837691 ACCAGTGTGAGCATCCCAGA 60.838 55.000 0.00 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1269 1287 0.941936 CACACGCCGTGTACACATGA 60.942 55.000 23.93 0.00 45.65 3.07 R
2630 2695 0.529337 CGCACTGCACTCTCCCATAG 60.529 60.000 1.11 0.00 0.00 2.23 R
2712 2777 0.671472 CATTGACAGGAGCAGTGCGA 60.671 55.000 10.00 0.00 0.00 5.10 R
2803 2916 1.458827 GTCTCAGTTTCAGCTTCTGCG 59.541 52.381 0.00 0.00 45.42 5.18 R
3095 3226 0.807667 GCGGTGCCTACTGTGATGAG 60.808 60.000 0.00 0.00 35.54 2.90 R
4049 4232 0.902984 TACTCCATGACCACCTGCGT 60.903 55.000 0.00 0.00 0.00 5.24 R
4589 4773 2.552599 TCCAATGTTGCTCGGTAACA 57.447 45.000 9.24 9.24 41.72 2.41 R
5764 5995 1.068055 GTGAAACCAAGGCATCAGCTG 60.068 52.381 7.63 7.63 41.70 4.24 R
6752 6983 0.040514 TCGGAAGCATTTTGTGTGCG 60.041 50.000 0.00 0.00 46.86 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.569250 AATATTCCCACAACAACGTGC 57.431 42.857 0.00 0.00 35.47 5.34
23 24 0.869068 TATTCCCACAACAACGTGCG 59.131 50.000 0.00 0.00 35.47 5.34
24 25 1.791103 ATTCCCACAACAACGTGCGG 61.791 55.000 0.00 0.00 35.47 5.69
25 26 3.959975 CCCACAACAACGTGCGGG 61.960 66.667 0.00 0.00 34.59 6.13
26 27 3.959975 CCACAACAACGTGCGGGG 61.960 66.667 0.00 0.00 35.47 5.73
27 28 4.622456 CACAACAACGTGCGGGGC 62.622 66.667 0.00 0.00 0.00 5.80
29 30 3.669344 CAACAACGTGCGGGGCAT 61.669 61.111 0.00 0.00 41.91 4.40
30 31 3.361977 AACAACGTGCGGGGCATC 61.362 61.111 0.00 0.00 41.91 3.91
31 32 4.634703 ACAACGTGCGGGGCATCA 62.635 61.111 0.00 0.00 41.91 3.07
32 33 3.133464 CAACGTGCGGGGCATCAT 61.133 61.111 0.00 0.00 41.91 2.45
33 34 2.824041 AACGTGCGGGGCATCATC 60.824 61.111 0.00 0.00 41.91 2.92
34 35 3.329542 AACGTGCGGGGCATCATCT 62.330 57.895 0.00 0.00 41.91 2.90
35 36 1.966901 AACGTGCGGGGCATCATCTA 61.967 55.000 0.00 0.00 41.91 1.98
36 37 1.665916 CGTGCGGGGCATCATCTAG 60.666 63.158 0.00 0.00 41.91 2.43
37 38 1.447643 GTGCGGGGCATCATCTAGT 59.552 57.895 0.00 0.00 41.91 2.57
38 39 0.179045 GTGCGGGGCATCATCTAGTT 60.179 55.000 0.00 0.00 41.91 2.24
39 40 0.179048 TGCGGGGCATCATCTAGTTG 60.179 55.000 0.00 0.00 31.71 3.16
40 41 0.179045 GCGGGGCATCATCTAGTTGT 60.179 55.000 0.83 0.00 0.00 3.32
41 42 1.747206 GCGGGGCATCATCTAGTTGTT 60.747 52.381 0.83 0.00 0.00 2.83
42 43 1.942657 CGGGGCATCATCTAGTTGTTG 59.057 52.381 7.29 7.29 0.00 3.33
43 44 2.680805 CGGGGCATCATCTAGTTGTTGT 60.681 50.000 11.64 0.00 0.00 3.32
73 74 1.888436 GCTGACGTGGTGGGAGATCA 61.888 60.000 0.00 0.00 0.00 2.92
74 75 0.174389 CTGACGTGGTGGGAGATCAG 59.826 60.000 0.00 0.00 0.00 2.90
112 130 5.694674 GAGGCGATCGATCTAATTGATTC 57.305 43.478 21.57 5.96 35.14 2.52
113 131 5.139435 AGGCGATCGATCTAATTGATTCA 57.861 39.130 21.57 0.00 35.14 2.57
124 142 2.746279 ATTGATTCATAACCCGGCCA 57.254 45.000 2.24 0.00 0.00 5.36
125 143 2.516227 TTGATTCATAACCCGGCCAA 57.484 45.000 2.24 0.00 0.00 4.52
126 144 2.516227 TGATTCATAACCCGGCCAAA 57.484 45.000 2.24 0.00 0.00 3.28
127 145 2.808919 TGATTCATAACCCGGCCAAAA 58.191 42.857 2.24 0.00 0.00 2.44
128 146 2.757868 TGATTCATAACCCGGCCAAAAG 59.242 45.455 2.24 0.00 0.00 2.27
129 147 2.296073 TTCATAACCCGGCCAAAAGT 57.704 45.000 2.24 0.00 0.00 2.66
130 148 3.436577 TTCATAACCCGGCCAAAAGTA 57.563 42.857 2.24 0.00 0.00 2.24
131 149 3.436577 TCATAACCCGGCCAAAAGTAA 57.563 42.857 2.24 0.00 0.00 2.24
132 150 3.764218 TCATAACCCGGCCAAAAGTAAA 58.236 40.909 2.24 0.00 0.00 2.01
133 151 3.759618 TCATAACCCGGCCAAAAGTAAAG 59.240 43.478 2.24 0.00 0.00 1.85
134 152 2.368311 AACCCGGCCAAAAGTAAAGA 57.632 45.000 2.24 0.00 0.00 2.52
135 153 2.368311 ACCCGGCCAAAAGTAAAGAA 57.632 45.000 2.24 0.00 0.00 2.52
136 154 2.668625 ACCCGGCCAAAAGTAAAGAAA 58.331 42.857 2.24 0.00 0.00 2.52
137 155 2.626266 ACCCGGCCAAAAGTAAAGAAAG 59.374 45.455 2.24 0.00 0.00 2.62
138 156 2.626266 CCCGGCCAAAAGTAAAGAAAGT 59.374 45.455 2.24 0.00 0.00 2.66
139 157 3.069016 CCCGGCCAAAAGTAAAGAAAGTT 59.931 43.478 2.24 0.00 0.00 2.66
140 158 4.442332 CCCGGCCAAAAGTAAAGAAAGTTT 60.442 41.667 2.24 0.00 0.00 2.66
141 159 5.113383 CCGGCCAAAAGTAAAGAAAGTTTT 58.887 37.500 2.24 0.00 33.31 2.43
142 160 5.006261 CCGGCCAAAAGTAAAGAAAGTTTTG 59.994 40.000 2.24 9.05 44.18 2.44
143 161 5.808030 CGGCCAAAAGTAAAGAAAGTTTTGA 59.192 36.000 15.14 0.00 46.03 2.69
144 162 6.478673 CGGCCAAAAGTAAAGAAAGTTTTGAT 59.521 34.615 15.14 0.00 46.03 2.57
145 163 7.306574 CGGCCAAAAGTAAAGAAAGTTTTGATC 60.307 37.037 15.14 8.51 46.03 2.92
146 164 7.710907 GGCCAAAAGTAAAGAAAGTTTTGATCT 59.289 33.333 15.14 0.00 46.03 2.75
147 165 9.098355 GCCAAAAGTAAAGAAAGTTTTGATCTT 57.902 29.630 15.14 0.00 46.03 2.40
165 183 7.615582 TGATCTTATTGATTCATAATCCGGC 57.384 36.000 0.00 0.00 37.09 6.13
166 184 6.599244 TGATCTTATTGATTCATAATCCGGCC 59.401 38.462 0.00 0.00 37.09 6.13
167 185 5.875224 TCTTATTGATTCATAATCCGGCCA 58.125 37.500 2.24 0.00 37.09 5.36
168 186 6.303054 TCTTATTGATTCATAATCCGGCCAA 58.697 36.000 2.24 0.00 37.09 4.52
169 187 6.775142 TCTTATTGATTCATAATCCGGCCAAA 59.225 34.615 2.24 0.00 37.09 3.28
199 217 3.157750 AGGTAAACGTCCTCAGTCTCT 57.842 47.619 0.00 0.00 0.00 3.10
201 219 2.818432 GGTAAACGTCCTCAGTCTCTGA 59.182 50.000 0.00 0.00 38.25 3.27
211 229 3.534357 TCAGTCTCTGAGAGAAGGGTT 57.466 47.619 14.68 0.00 40.59 4.11
212 230 3.161067 TCAGTCTCTGAGAGAAGGGTTG 58.839 50.000 14.68 8.04 40.59 3.77
213 231 2.233431 CAGTCTCTGAGAGAAGGGTTGG 59.767 54.545 14.68 0.00 40.59 3.77
214 232 1.552792 GTCTCTGAGAGAAGGGTTGGG 59.447 57.143 14.68 0.00 40.59 4.12
215 233 1.433199 TCTCTGAGAGAAGGGTTGGGA 59.567 52.381 10.22 0.00 35.59 4.37
216 234 2.045047 TCTCTGAGAGAAGGGTTGGGAT 59.955 50.000 10.22 0.00 35.59 3.85
217 235 2.433970 CTCTGAGAGAAGGGTTGGGATC 59.566 54.545 2.60 0.00 0.00 3.36
218 236 1.488393 CTGAGAGAAGGGTTGGGATCC 59.512 57.143 1.92 1.92 0.00 3.36
219 237 1.081174 TGAGAGAAGGGTTGGGATCCT 59.919 52.381 12.58 0.00 34.29 3.24
220 238 1.765904 GAGAGAAGGGTTGGGATCCTC 59.234 57.143 12.58 2.25 32.02 3.71
221 239 1.367848 AGAGAAGGGTTGGGATCCTCT 59.632 52.381 12.58 4.27 32.02 3.69
222 240 1.488393 GAGAAGGGTTGGGATCCTCTG 59.512 57.143 12.58 0.00 32.02 3.35
223 241 0.106967 GAAGGGTTGGGATCCTCTGC 60.107 60.000 12.58 0.00 32.02 4.26
224 242 0.846427 AAGGGTTGGGATCCTCTGCA 60.846 55.000 12.58 0.00 32.02 4.41
225 243 1.225704 GGGTTGGGATCCTCTGCAG 59.774 63.158 12.58 7.63 0.00 4.41
226 244 1.566298 GGGTTGGGATCCTCTGCAGT 61.566 60.000 14.67 0.00 0.00 4.40
227 245 1.204146 GGTTGGGATCCTCTGCAGTA 58.796 55.000 14.67 0.81 0.00 2.74
228 246 1.134371 GGTTGGGATCCTCTGCAGTAC 60.134 57.143 14.67 0.00 0.00 2.73
229 247 1.834263 GTTGGGATCCTCTGCAGTACT 59.166 52.381 14.67 0.00 0.00 2.73
230 248 1.489481 TGGGATCCTCTGCAGTACTG 58.511 55.000 18.93 18.93 0.00 2.74
231 249 1.273267 TGGGATCCTCTGCAGTACTGT 60.273 52.381 23.44 2.01 0.00 3.55
232 250 2.024369 TGGGATCCTCTGCAGTACTGTA 60.024 50.000 23.44 18.51 0.00 2.74
233 251 3.235200 GGGATCCTCTGCAGTACTGTAT 58.765 50.000 23.44 4.21 0.00 2.29
234 252 3.006323 GGGATCCTCTGCAGTACTGTATG 59.994 52.174 23.44 14.21 0.00 2.39
235 253 3.006323 GGATCCTCTGCAGTACTGTATGG 59.994 52.174 23.44 21.28 0.00 2.74
236 254 3.101643 TCCTCTGCAGTACTGTATGGT 57.898 47.619 23.44 0.00 0.00 3.55
237 255 4.245251 TCCTCTGCAGTACTGTATGGTA 57.755 45.455 23.44 11.21 0.00 3.25
238 256 3.952323 TCCTCTGCAGTACTGTATGGTAC 59.048 47.826 23.44 6.13 41.47 3.34
257 275 2.462456 CAGTACAGTCACTGGCATGT 57.538 50.000 10.28 0.00 41.88 3.21
258 276 2.071540 CAGTACAGTCACTGGCATGTG 58.928 52.381 10.28 9.81 41.88 3.21
259 277 1.002430 AGTACAGTCACTGGCATGTGG 59.998 52.381 10.28 4.59 38.40 4.17
260 278 1.001974 GTACAGTCACTGGCATGTGGA 59.998 52.381 10.28 0.00 38.40 4.02
261 279 0.250467 ACAGTCACTGGCATGTGGAC 60.250 55.000 10.28 8.08 38.40 4.02
262 280 0.957395 CAGTCACTGGCATGTGGACC 60.957 60.000 14.28 0.00 38.40 4.46
263 281 1.675641 GTCACTGGCATGTGGACCC 60.676 63.158 14.28 0.00 38.40 4.46
264 282 2.747460 CACTGGCATGTGGACCCG 60.747 66.667 8.60 0.00 34.56 5.28
265 283 4.033776 ACTGGCATGTGGACCCGG 62.034 66.667 0.00 0.00 0.00 5.73
276 294 4.796495 GACCCGGCCCCACATGTC 62.796 72.222 0.00 0.00 0.00 3.06
278 296 4.127744 CCCGGCCCCACATGTCAT 62.128 66.667 0.00 0.00 0.00 3.06
279 297 2.516930 CCGGCCCCACATGTCATC 60.517 66.667 0.00 0.00 0.00 2.92
280 298 2.516930 CGGCCCCACATGTCATCC 60.517 66.667 0.00 0.00 0.00 3.51
281 299 3.010144 GGCCCCACATGTCATCCT 58.990 61.111 0.00 0.00 0.00 3.24
282 300 1.152881 GGCCCCACATGTCATCCTC 60.153 63.158 0.00 0.00 0.00 3.71
283 301 1.609239 GCCCCACATGTCATCCTCA 59.391 57.895 0.00 0.00 0.00 3.86
284 302 0.749454 GCCCCACATGTCATCCTCAC 60.749 60.000 0.00 0.00 0.00 3.51
285 303 0.914644 CCCCACATGTCATCCTCACT 59.085 55.000 0.00 0.00 0.00 3.41
286 304 2.118679 CCCCACATGTCATCCTCACTA 58.881 52.381 0.00 0.00 0.00 2.74
287 305 2.158900 CCCCACATGTCATCCTCACTAC 60.159 54.545 0.00 0.00 0.00 2.73
288 306 2.501316 CCCACATGTCATCCTCACTACA 59.499 50.000 0.00 0.00 0.00 2.74
289 307 3.431346 CCCACATGTCATCCTCACTACAG 60.431 52.174 0.00 0.00 0.00 2.74
290 308 3.193263 CACATGTCATCCTCACTACAGC 58.807 50.000 0.00 0.00 0.00 4.40
291 309 2.833943 ACATGTCATCCTCACTACAGCA 59.166 45.455 0.00 0.00 0.00 4.41
292 310 3.193263 CATGTCATCCTCACTACAGCAC 58.807 50.000 0.00 0.00 0.00 4.40
293 311 1.550524 TGTCATCCTCACTACAGCACC 59.449 52.381 0.00 0.00 0.00 5.01
294 312 1.550524 GTCATCCTCACTACAGCACCA 59.449 52.381 0.00 0.00 0.00 4.17
295 313 2.169352 GTCATCCTCACTACAGCACCAT 59.831 50.000 0.00 0.00 0.00 3.55
296 314 3.384789 GTCATCCTCACTACAGCACCATA 59.615 47.826 0.00 0.00 0.00 2.74
297 315 3.384789 TCATCCTCACTACAGCACCATAC 59.615 47.826 0.00 0.00 0.00 2.39
298 316 2.815158 TCCTCACTACAGCACCATACA 58.185 47.619 0.00 0.00 0.00 2.29
299 317 3.169908 TCCTCACTACAGCACCATACAA 58.830 45.455 0.00 0.00 0.00 2.41
300 318 3.774766 TCCTCACTACAGCACCATACAAT 59.225 43.478 0.00 0.00 0.00 2.71
301 319 4.959839 TCCTCACTACAGCACCATACAATA 59.040 41.667 0.00 0.00 0.00 1.90
302 320 5.050490 CCTCACTACAGCACCATACAATAC 58.950 45.833 0.00 0.00 0.00 1.89
303 321 5.163405 CCTCACTACAGCACCATACAATACT 60.163 44.000 0.00 0.00 0.00 2.12
304 322 5.660460 TCACTACAGCACCATACAATACTG 58.340 41.667 0.00 0.00 0.00 2.74
305 323 4.271049 CACTACAGCACCATACAATACTGC 59.729 45.833 0.00 0.00 0.00 4.40
306 324 3.348647 ACAGCACCATACAATACTGCA 57.651 42.857 0.00 0.00 0.00 4.41
307 325 3.273434 ACAGCACCATACAATACTGCAG 58.727 45.455 13.48 13.48 0.00 4.41
308 326 3.055167 ACAGCACCATACAATACTGCAGA 60.055 43.478 23.35 4.31 0.00 4.26
309 327 3.558829 CAGCACCATACAATACTGCAGAG 59.441 47.826 23.35 9.59 0.00 3.35
310 328 2.874701 GCACCATACAATACTGCAGAGG 59.125 50.000 23.35 8.85 0.00 3.69
311 329 3.432186 GCACCATACAATACTGCAGAGGA 60.432 47.826 23.35 5.37 0.00 3.71
312 330 4.744867 GCACCATACAATACTGCAGAGGAT 60.745 45.833 23.35 7.72 0.00 3.24
313 331 4.993584 CACCATACAATACTGCAGAGGATC 59.006 45.833 23.35 0.00 0.00 3.36
314 332 4.040952 ACCATACAATACTGCAGAGGATCC 59.959 45.833 23.35 2.48 33.66 3.36
315 333 4.564406 CCATACAATACTGCAGAGGATCCC 60.564 50.000 23.35 0.00 33.66 3.85
316 334 2.481441 ACAATACTGCAGAGGATCCCA 58.519 47.619 23.35 0.00 33.66 4.37
317 335 2.846206 ACAATACTGCAGAGGATCCCAA 59.154 45.455 23.35 0.00 33.66 4.12
318 336 3.209410 CAATACTGCAGAGGATCCCAAC 58.791 50.000 23.35 0.17 33.66 3.77
319 337 1.204146 TACTGCAGAGGATCCCAACC 58.796 55.000 23.35 0.00 33.66 3.77
320 338 1.225704 CTGCAGAGGATCCCAACCC 59.774 63.158 8.42 0.00 33.66 4.11
321 339 2.276309 CTGCAGAGGATCCCAACCCC 62.276 65.000 8.42 0.00 33.66 4.95
322 340 2.308722 GCAGAGGATCCCAACCCCA 61.309 63.158 8.55 0.00 33.66 4.96
344 362 3.679389 AGAGAAGTACTTTGCACCCATG 58.321 45.455 10.02 0.00 0.00 3.66
346 364 3.149196 AGAAGTACTTTGCACCCATGTG 58.851 45.455 10.02 0.00 45.65 3.21
347 365 2.949177 AGTACTTTGCACCCATGTGA 57.051 45.000 0.00 0.00 45.76 3.58
348 366 3.439857 AGTACTTTGCACCCATGTGAT 57.560 42.857 0.00 0.00 45.76 3.06
349 367 3.766545 AGTACTTTGCACCCATGTGATT 58.233 40.909 0.00 0.00 45.76 2.57
350 368 3.507233 AGTACTTTGCACCCATGTGATTG 59.493 43.478 0.00 0.00 45.76 2.67
351 369 1.001181 ACTTTGCACCCATGTGATTGC 59.999 47.619 0.00 0.00 45.76 3.56
352 370 0.038435 TTTGCACCCATGTGATTGCG 60.038 50.000 0.00 0.00 45.76 4.85
353 371 1.875420 TTGCACCCATGTGATTGCGG 61.875 55.000 0.00 0.00 45.76 5.69
354 372 3.067480 GCACCCATGTGATTGCGGG 62.067 63.158 0.00 0.00 45.76 6.13
355 373 2.044053 ACCCATGTGATTGCGGGG 60.044 61.111 0.00 0.00 43.52 5.73
356 374 2.834505 CCCATGTGATTGCGGGGG 60.835 66.667 0.00 0.00 34.81 5.40
357 375 2.275089 CCATGTGATTGCGGGGGA 59.725 61.111 0.00 0.00 0.00 4.81
358 376 2.120909 CCATGTGATTGCGGGGGAC 61.121 63.158 0.00 0.00 0.00 4.46
359 377 1.378382 CATGTGATTGCGGGGGACA 60.378 57.895 0.00 0.00 0.00 4.02
360 378 1.077501 ATGTGATTGCGGGGGACAG 60.078 57.895 0.00 0.00 0.00 3.51
361 379 1.561769 ATGTGATTGCGGGGGACAGA 61.562 55.000 0.00 0.00 0.00 3.41
362 380 1.450312 GTGATTGCGGGGGACAGAG 60.450 63.158 0.00 0.00 0.00 3.35
363 381 1.612146 TGATTGCGGGGGACAGAGA 60.612 57.895 0.00 0.00 0.00 3.10
364 382 0.982852 TGATTGCGGGGGACAGAGAT 60.983 55.000 0.00 0.00 0.00 2.75
365 383 0.250081 GATTGCGGGGGACAGAGATC 60.250 60.000 0.00 0.00 0.00 2.75
366 384 0.982852 ATTGCGGGGGACAGAGATCA 60.983 55.000 0.00 0.00 0.00 2.92
367 385 1.617018 TTGCGGGGGACAGAGATCAG 61.617 60.000 0.00 0.00 0.00 2.90
368 386 2.801631 GCGGGGGACAGAGATCAGG 61.802 68.421 0.00 0.00 0.00 3.86
369 387 1.381872 CGGGGGACAGAGATCAGGT 60.382 63.158 0.00 0.00 0.00 4.00
370 388 1.680522 CGGGGGACAGAGATCAGGTG 61.681 65.000 0.00 0.00 0.00 4.00
371 389 0.325671 GGGGGACAGAGATCAGGTGA 60.326 60.000 0.00 0.00 0.00 4.02
372 390 0.827368 GGGGACAGAGATCAGGTGAC 59.173 60.000 0.00 0.00 0.00 3.67
373 391 1.561643 GGGACAGAGATCAGGTGACA 58.438 55.000 0.00 0.00 0.00 3.58
374 392 2.114616 GGGACAGAGATCAGGTGACAT 58.885 52.381 0.00 0.00 0.00 3.06
375 393 2.158986 GGGACAGAGATCAGGTGACATG 60.159 54.545 0.00 0.00 0.00 3.21
376 394 2.548875 GACAGAGATCAGGTGACATGC 58.451 52.381 0.00 0.00 0.00 4.06
377 395 1.904537 ACAGAGATCAGGTGACATGCA 59.095 47.619 0.00 0.00 0.00 3.96
378 396 2.277969 CAGAGATCAGGTGACATGCAC 58.722 52.381 10.63 10.63 46.98 4.57
394 412 2.330254 CACCTTTGCATGTCACCGT 58.670 52.632 0.00 0.00 0.00 4.83
395 413 0.040157 CACCTTTGCATGTCACCGTG 60.040 55.000 0.00 0.00 0.00 4.94
396 414 0.465460 ACCTTTGCATGTCACCGTGT 60.465 50.000 0.00 0.00 0.00 4.49
397 415 0.040157 CCTTTGCATGTCACCGTGTG 60.040 55.000 0.00 0.00 34.45 3.82
398 416 0.661187 CTTTGCATGTCACCGTGTGC 60.661 55.000 5.81 5.81 38.05 4.57
399 417 2.069465 TTTGCATGTCACCGTGTGCC 62.069 55.000 9.42 0.00 36.79 5.01
400 418 2.669569 GCATGTCACCGTGTGCCT 60.670 61.111 0.00 0.00 32.98 4.75
401 419 2.260869 GCATGTCACCGTGTGCCTT 61.261 57.895 0.00 0.00 32.98 4.35
402 420 1.575922 CATGTCACCGTGTGCCTTG 59.424 57.895 0.00 0.00 32.98 3.61
403 421 2.260869 ATGTCACCGTGTGCCTTGC 61.261 57.895 0.00 0.00 32.98 4.01
404 422 4.012895 GTCACCGTGTGCCTTGCG 62.013 66.667 0.00 0.00 32.98 4.85
415 433 4.001248 CCTTGCGGCCTGAATTCA 57.999 55.556 8.12 8.12 0.00 2.57
416 434 2.266070 CCTTGCGGCCTGAATTCAA 58.734 52.632 9.88 0.00 0.00 2.69
417 435 0.602562 CCTTGCGGCCTGAATTCAAA 59.397 50.000 9.88 0.00 0.00 2.69
418 436 1.205417 CCTTGCGGCCTGAATTCAAAT 59.795 47.619 9.88 0.00 0.00 2.32
419 437 2.354003 CCTTGCGGCCTGAATTCAAATT 60.354 45.455 9.88 0.00 0.00 1.82
420 438 3.328505 CTTGCGGCCTGAATTCAAATTT 58.671 40.909 9.88 0.00 0.00 1.82
421 439 4.493547 CTTGCGGCCTGAATTCAAATTTA 58.506 39.130 9.88 0.00 0.00 1.40
422 440 4.527509 TGCGGCCTGAATTCAAATTTAA 57.472 36.364 9.88 0.00 0.00 1.52
423 441 4.887748 TGCGGCCTGAATTCAAATTTAAA 58.112 34.783 9.88 0.00 0.00 1.52
424 442 4.688413 TGCGGCCTGAATTCAAATTTAAAC 59.312 37.500 9.88 0.00 0.00 2.01
425 443 4.688413 GCGGCCTGAATTCAAATTTAAACA 59.312 37.500 9.88 0.00 0.00 2.83
426 444 5.351189 GCGGCCTGAATTCAAATTTAAACAT 59.649 36.000 9.88 0.00 0.00 2.71
427 445 6.128309 GCGGCCTGAATTCAAATTTAAACATT 60.128 34.615 9.88 0.00 0.00 2.71
428 446 7.064016 GCGGCCTGAATTCAAATTTAAACATTA 59.936 33.333 9.88 0.00 0.00 1.90
429 447 8.379902 CGGCCTGAATTCAAATTTAAACATTAC 58.620 33.333 9.88 0.00 0.00 1.89
430 448 8.379902 GGCCTGAATTCAAATTTAAACATTACG 58.620 33.333 9.88 0.00 0.00 3.18
431 449 9.134734 GCCTGAATTCAAATTTAAACATTACGA 57.865 29.630 9.88 0.00 0.00 3.43
466 484 6.715344 AAAAATCATGCATGTTCACATCAC 57.285 33.333 25.43 0.00 33.61 3.06
467 485 5.394224 AAATCATGCATGTTCACATCACA 57.606 34.783 25.43 3.20 33.61 3.58
468 486 5.592104 AATCATGCATGTTCACATCACAT 57.408 34.783 25.43 5.53 35.10 3.21
469 487 6.702716 AATCATGCATGTTCACATCACATA 57.297 33.333 25.43 2.45 32.88 2.29
470 488 6.894339 ATCATGCATGTTCACATCACATAT 57.106 33.333 25.43 4.81 32.88 1.78
471 489 6.702716 TCATGCATGTTCACATCACATATT 57.297 33.333 25.43 0.00 32.88 1.28
472 490 7.804843 TCATGCATGTTCACATCACATATTA 57.195 32.000 25.43 0.00 32.88 0.98
473 491 8.398878 TCATGCATGTTCACATCACATATTAT 57.601 30.769 25.43 0.00 32.88 1.28
474 492 8.293867 TCATGCATGTTCACATCACATATTATG 58.706 33.333 25.43 2.03 32.88 1.90
475 493 7.804843 TGCATGTTCACATCACATATTATGA 57.195 32.000 10.62 0.00 32.88 2.15
476 494 8.398878 TGCATGTTCACATCACATATTATGAT 57.601 30.769 10.62 0.00 37.27 2.45
477 495 9.504708 TGCATGTTCACATCACATATTATGATA 57.495 29.630 10.62 0.00 34.99 2.15
481 499 9.283768 TGTTCACATCACATATTATGATAACCC 57.716 33.333 10.62 0.00 34.99 4.11
482 500 8.730680 GTTCACATCACATATTATGATAACCCC 58.269 37.037 10.62 0.00 34.99 4.95
483 501 8.218423 TCACATCACATATTATGATAACCCCT 57.782 34.615 10.62 0.00 34.99 4.79
484 502 9.332713 TCACATCACATATTATGATAACCCCTA 57.667 33.333 10.62 0.00 34.99 3.53
485 503 9.958180 CACATCACATATTATGATAACCCCTAA 57.042 33.333 10.62 0.00 34.99 2.69
516 534 9.474920 TTCAGATCAAAATTTGAAACATACACC 57.525 29.630 12.75 0.00 43.95 4.16
517 535 7.807433 TCAGATCAAAATTTGAAACATACACCG 59.193 33.333 12.75 0.00 43.95 4.94
518 536 7.807433 CAGATCAAAATTTGAAACATACACCGA 59.193 33.333 12.75 0.00 43.95 4.69
519 537 8.023128 AGATCAAAATTTGAAACATACACCGAG 58.977 33.333 12.75 0.00 43.95 4.63
520 538 7.265647 TCAAAATTTGAAACATACACCGAGA 57.734 32.000 5.87 0.00 36.59 4.04
521 539 7.708051 TCAAAATTTGAAACATACACCGAGAA 58.292 30.769 5.87 0.00 36.59 2.87
522 540 7.860373 TCAAAATTTGAAACATACACCGAGAAG 59.140 33.333 5.87 0.00 36.59 2.85
523 541 4.742438 TTTGAAACATACACCGAGAAGC 57.258 40.909 0.00 0.00 0.00 3.86
524 542 3.394674 TGAAACATACACCGAGAAGCA 57.605 42.857 0.00 0.00 0.00 3.91
525 543 3.734463 TGAAACATACACCGAGAAGCAA 58.266 40.909 0.00 0.00 0.00 3.91
526 544 4.130857 TGAAACATACACCGAGAAGCAAA 58.869 39.130 0.00 0.00 0.00 3.68
527 545 4.576873 TGAAACATACACCGAGAAGCAAAA 59.423 37.500 0.00 0.00 0.00 2.44
528 546 5.066634 TGAAACATACACCGAGAAGCAAAAA 59.933 36.000 0.00 0.00 0.00 1.94
553 571 9.512588 AAAGAGAAATCTGTCATGAATAGTTGT 57.487 29.630 0.00 0.00 0.00 3.32
554 572 8.489990 AGAGAAATCTGTCATGAATAGTTGTG 57.510 34.615 0.00 0.00 0.00 3.33
555 573 8.316946 AGAGAAATCTGTCATGAATAGTTGTGA 58.683 33.333 0.00 0.00 0.00 3.58
556 574 8.853077 AGAAATCTGTCATGAATAGTTGTGAA 57.147 30.769 0.00 0.00 0.00 3.18
557 575 9.458727 AGAAATCTGTCATGAATAGTTGTGAAT 57.541 29.630 0.00 0.00 0.00 2.57
558 576 9.499585 GAAATCTGTCATGAATAGTTGTGAATG 57.500 33.333 0.00 0.00 0.00 2.67
559 577 6.990341 TCTGTCATGAATAGTTGTGAATGG 57.010 37.500 0.00 0.00 0.00 3.16
560 578 6.475504 TCTGTCATGAATAGTTGTGAATGGT 58.524 36.000 0.00 0.00 0.00 3.55
561 579 6.942005 TCTGTCATGAATAGTTGTGAATGGTT 59.058 34.615 0.00 0.00 0.00 3.67
562 580 7.119699 TCTGTCATGAATAGTTGTGAATGGTTC 59.880 37.037 0.00 0.00 0.00 3.62
563 581 6.942005 TGTCATGAATAGTTGTGAATGGTTCT 59.058 34.615 0.00 0.00 0.00 3.01
564 582 7.119699 TGTCATGAATAGTTGTGAATGGTTCTC 59.880 37.037 0.00 0.00 0.00 2.87
565 583 7.335422 GTCATGAATAGTTGTGAATGGTTCTCT 59.665 37.037 0.00 0.00 0.00 3.10
566 584 7.335171 TCATGAATAGTTGTGAATGGTTCTCTG 59.665 37.037 0.00 0.00 0.00 3.35
567 585 6.533730 TGAATAGTTGTGAATGGTTCTCTGT 58.466 36.000 0.00 0.00 0.00 3.41
568 586 7.676004 TGAATAGTTGTGAATGGTTCTCTGTA 58.324 34.615 0.00 0.00 0.00 2.74
569 587 8.321353 TGAATAGTTGTGAATGGTTCTCTGTAT 58.679 33.333 0.00 0.00 0.00 2.29
570 588 9.817809 GAATAGTTGTGAATGGTTCTCTGTATA 57.182 33.333 0.00 0.00 0.00 1.47
571 589 9.601217 AATAGTTGTGAATGGTTCTCTGTATAC 57.399 33.333 0.00 0.00 0.00 1.47
572 590 7.246171 AGTTGTGAATGGTTCTCTGTATACT 57.754 36.000 4.17 0.00 0.00 2.12
573 591 8.362464 AGTTGTGAATGGTTCTCTGTATACTA 57.638 34.615 4.17 0.00 0.00 1.82
574 592 8.982723 AGTTGTGAATGGTTCTCTGTATACTAT 58.017 33.333 4.17 0.00 0.00 2.12
575 593 9.601217 GTTGTGAATGGTTCTCTGTATACTATT 57.399 33.333 4.17 0.00 0.00 1.73
576 594 9.817809 TTGTGAATGGTTCTCTGTATACTATTC 57.182 33.333 4.17 0.00 39.07 1.75
577 595 8.977412 TGTGAATGGTTCTCTGTATACTATTCA 58.023 33.333 4.17 8.53 43.14 2.57
579 597 8.977412 TGAATGGTTCTCTGTATACTATTCACA 58.023 33.333 4.17 0.00 41.64 3.58
580 598 9.988815 GAATGGTTCTCTGTATACTATTCACAT 57.011 33.333 4.17 0.00 38.71 3.21
581 599 9.988815 AATGGTTCTCTGTATACTATTCACATC 57.011 33.333 4.17 0.00 0.00 3.06
582 600 8.768501 TGGTTCTCTGTATACTATTCACATCT 57.231 34.615 4.17 0.00 0.00 2.90
583 601 8.633561 TGGTTCTCTGTATACTATTCACATCTG 58.366 37.037 4.17 0.00 0.00 2.90
584 602 8.851145 GGTTCTCTGTATACTATTCACATCTGA 58.149 37.037 4.17 0.00 0.00 3.27
585 603 9.891828 GTTCTCTGTATACTATTCACATCTGAG 57.108 37.037 4.17 0.00 0.00 3.35
586 604 9.634021 TTCTCTGTATACTATTCACATCTGAGT 57.366 33.333 4.17 0.00 0.00 3.41
587 605 9.634021 TCTCTGTATACTATTCACATCTGAGTT 57.366 33.333 4.17 0.00 0.00 3.01
596 614 9.566432 ACTATTCACATCTGAGTTTCTCTTTTT 57.434 29.630 0.00 0.00 0.00 1.94
617 635 4.840401 TTGCTTCTCGATGTATGTTTCG 57.160 40.909 0.00 0.00 36.72 3.46
618 636 4.104696 TGCTTCTCGATGTATGTTTCGA 57.895 40.909 0.00 0.00 41.70 3.71
626 644 6.961359 TCGATGTATGTTTCGAGTTTTGAT 57.039 33.333 0.00 0.00 39.29 2.57
627 645 6.989437 TCGATGTATGTTTCGAGTTTTGATC 58.011 36.000 0.00 0.00 39.29 2.92
628 646 6.811665 TCGATGTATGTTTCGAGTTTTGATCT 59.188 34.615 0.00 0.00 39.29 2.75
629 647 6.896613 CGATGTATGTTTCGAGTTTTGATCTG 59.103 38.462 0.00 0.00 37.55 2.90
630 648 7.201435 CGATGTATGTTTCGAGTTTTGATCTGA 60.201 37.037 0.00 0.00 37.55 3.27
631 649 7.722795 TGTATGTTTCGAGTTTTGATCTGAA 57.277 32.000 0.00 0.00 0.00 3.02
632 650 8.322906 TGTATGTTTCGAGTTTTGATCTGAAT 57.677 30.769 0.00 0.00 0.00 2.57
633 651 8.783093 TGTATGTTTCGAGTTTTGATCTGAATT 58.217 29.630 0.00 0.00 0.00 2.17
634 652 9.612620 GTATGTTTCGAGTTTTGATCTGAATTT 57.387 29.630 0.00 0.00 0.00 1.82
636 654 8.925161 TGTTTCGAGTTTTGATCTGAATTTTT 57.075 26.923 0.00 0.00 0.00 1.94
662 680 9.914834 TTTAAGGGTTATCTAAATATGTGCTGT 57.085 29.630 0.00 0.00 0.00 4.40
663 681 7.807977 AAGGGTTATCTAAATATGTGCTGTG 57.192 36.000 0.00 0.00 0.00 3.66
664 682 7.136822 AGGGTTATCTAAATATGTGCTGTGA 57.863 36.000 0.00 0.00 0.00 3.58
665 683 7.573710 AGGGTTATCTAAATATGTGCTGTGAA 58.426 34.615 0.00 0.00 0.00 3.18
666 684 8.220559 AGGGTTATCTAAATATGTGCTGTGAAT 58.779 33.333 0.00 0.00 0.00 2.57
667 685 9.502091 GGGTTATCTAAATATGTGCTGTGAATA 57.498 33.333 0.00 0.00 0.00 1.75
671 689 8.625786 ATCTAAATATGTGCTGTGAATATGCA 57.374 30.769 0.00 0.00 0.00 3.96
672 690 8.625786 TCTAAATATGTGCTGTGAATATGCAT 57.374 30.769 3.79 3.79 39.00 3.96
673 691 8.508875 TCTAAATATGTGCTGTGAATATGCATG 58.491 33.333 10.16 0.00 39.00 4.06
674 692 6.644248 AATATGTGCTGTGAATATGCATGT 57.356 33.333 10.16 0.00 39.00 3.21
675 693 4.994907 ATGTGCTGTGAATATGCATGTT 57.005 36.364 10.16 9.33 39.00 2.71
676 694 4.787260 TGTGCTGTGAATATGCATGTTT 57.213 36.364 10.16 2.65 39.00 2.83
677 695 5.136816 TGTGCTGTGAATATGCATGTTTT 57.863 34.783 10.16 0.00 39.00 2.43
678 696 5.539979 TGTGCTGTGAATATGCATGTTTTT 58.460 33.333 10.16 0.00 39.00 1.94
714 732 8.910599 TTTCGCAATGTTTAAATTTGAATTCG 57.089 26.923 14.55 9.81 0.00 3.34
715 733 7.043454 TCGCAATGTTTAAATTTGAATTCGG 57.957 32.000 14.55 0.00 0.00 4.30
716 734 6.090088 TCGCAATGTTTAAATTTGAATTCGGG 59.910 34.615 14.55 0.00 0.00 5.14
717 735 6.020984 GCAATGTTTAAATTTGAATTCGGGC 58.979 36.000 14.55 0.00 0.00 6.13
718 736 6.541969 CAATGTTTAAATTTGAATTCGGGCC 58.458 36.000 0.00 0.00 0.00 5.80
719 737 4.238514 TGTTTAAATTTGAATTCGGGCCG 58.761 39.130 22.51 22.51 0.00 6.13
720 738 2.570442 TAAATTTGAATTCGGGCCGC 57.430 45.000 23.83 7.83 0.00 6.53
721 739 0.605589 AAATTTGAATTCGGGCCGCA 59.394 45.000 23.83 12.24 0.00 5.69
722 740 0.605589 AATTTGAATTCGGGCCGCAA 59.394 45.000 23.83 16.89 0.00 4.85
723 741 0.173255 ATTTGAATTCGGGCCGCAAG 59.827 50.000 23.83 0.00 0.00 4.01
735 753 4.012895 CGCAAGGCACACGGTGAC 62.013 66.667 16.29 6.26 42.83 3.67
736 754 2.899838 GCAAGGCACACGGTGACA 60.900 61.111 16.29 0.00 45.35 3.58
737 755 2.260869 GCAAGGCACACGGTGACAT 61.261 57.895 16.29 0.98 45.35 3.06
738 756 1.575922 CAAGGCACACGGTGACATG 59.424 57.895 16.29 3.91 45.35 3.21
739 757 2.260869 AAGGCACACGGTGACATGC 61.261 57.895 16.29 13.96 45.35 4.06
740 758 2.956799 AAGGCACACGGTGACATGCA 62.957 55.000 16.29 0.00 45.35 3.96
741 759 2.551006 GGCACACGGTGACATGCAA 61.551 57.895 16.29 0.00 41.94 4.08
742 760 1.358402 GCACACGGTGACATGCAAA 59.642 52.632 16.29 0.00 38.00 3.68
743 761 0.661187 GCACACGGTGACATGCAAAG 60.661 55.000 16.29 0.00 38.00 2.77
744 762 0.040157 CACACGGTGACATGCAAAGG 60.040 55.000 16.29 0.00 35.23 3.11
745 763 0.465460 ACACGGTGACATGCAAAGGT 60.465 50.000 16.29 0.00 0.00 3.50
746 764 0.040157 CACGGTGACATGCAAAGGTG 60.040 55.000 0.74 0.00 0.00 4.00
763 781 2.687700 GTGCATGTCACCTGATCTCT 57.312 50.000 8.54 0.00 39.79 3.10
764 782 2.277969 GTGCATGTCACCTGATCTCTG 58.722 52.381 8.54 0.00 39.79 3.35
765 783 1.904537 TGCATGTCACCTGATCTCTGT 59.095 47.619 0.00 0.00 0.00 3.41
766 784 2.093816 TGCATGTCACCTGATCTCTGTC 60.094 50.000 0.00 0.00 0.00 3.51
767 785 2.741228 GCATGTCACCTGATCTCTGTCC 60.741 54.545 0.00 0.00 0.00 4.02
848 866 1.870993 GCGGCGAGGTATCCGTAAAAT 60.871 52.381 12.98 0.00 46.79 1.82
879 897 2.738521 GTGACGTGACAGGCGCAT 60.739 61.111 10.83 0.00 0.00 4.73
880 898 2.030412 TGACGTGACAGGCGCATT 59.970 55.556 10.83 0.00 0.00 3.56
881 899 2.316867 TGACGTGACAGGCGCATTG 61.317 57.895 10.83 9.92 0.00 2.82
882 900 2.280797 ACGTGACAGGCGCATTGT 60.281 55.556 15.49 15.49 0.00 2.71
917 935 2.359975 CACCTCGGAGCCAAACCC 60.360 66.667 0.00 0.00 0.00 4.11
977 995 2.363683 GATCTTTGCTTCCCTCACAGG 58.636 52.381 0.00 0.00 34.30 4.00
978 996 1.140312 TCTTTGCTTCCCTCACAGGT 58.860 50.000 0.00 0.00 31.93 4.00
979 997 1.072331 TCTTTGCTTCCCTCACAGGTC 59.928 52.381 0.00 0.00 31.93 3.85
980 998 0.843309 TTTGCTTCCCTCACAGGTCA 59.157 50.000 0.00 0.00 31.93 4.02
981 999 0.108585 TTGCTTCCCTCACAGGTCAC 59.891 55.000 0.00 0.00 31.93 3.67
982 1000 1.053835 TGCTTCCCTCACAGGTCACA 61.054 55.000 0.00 0.00 31.93 3.58
983 1001 0.321122 GCTTCCCTCACAGGTCACAG 60.321 60.000 0.00 0.00 31.93 3.66
1156 1174 2.041405 CCACCTCCCCCTCCTCTC 60.041 72.222 0.00 0.00 0.00 3.20
1173 1191 3.482436 CTCTCCCACGACTAAGAGCTAT 58.518 50.000 0.00 0.00 0.00 2.97
1185 1203 0.180642 AGAGCTATGACCGAGACCGA 59.819 55.000 0.00 0.00 38.22 4.69
1186 1204 0.589223 GAGCTATGACCGAGACCGAG 59.411 60.000 0.00 0.00 38.22 4.63
1189 1207 1.152819 TATGACCGAGACCGAGGGG 60.153 63.158 0.00 0.00 38.22 4.79
1225 1243 3.064324 CAAAGGGAAGCAGGGCGG 61.064 66.667 0.00 0.00 0.00 6.13
1263 1281 3.197614 GGCGACGAGGTGAGATCA 58.802 61.111 0.00 0.00 0.00 2.92
1269 1287 2.031595 CGACGAGGTGAGATCAATCGAT 60.032 50.000 19.63 0.00 38.71 3.59
1295 1313 2.740440 CACGGCGTGTGCATACCA 60.740 61.111 30.56 0.00 45.35 3.25
1296 1314 2.031314 ACGGCGTGTGCATACCAA 59.969 55.556 13.76 0.00 45.35 3.67
1299 1317 1.089481 CGGCGTGTGCATACCAAGAT 61.089 55.000 8.11 0.00 45.35 2.40
1344 1362 5.649782 AACACAGCTTATTTTCCCTGATG 57.350 39.130 0.00 0.00 0.00 3.07
1379 1397 0.319728 TCTTGTGGCTGACAGCTCTC 59.680 55.000 25.92 16.52 41.99 3.20
1416 1434 1.466192 CGCGTACGTGATCAAGGTACA 60.466 52.381 23.95 5.26 46.08 2.90
1436 1454 5.432885 ACACTTTTATCCAAGTTCCAACG 57.567 39.130 0.00 0.00 34.60 4.10
1441 1459 6.204108 ACTTTTATCCAAGTTCCAACGTACTG 59.796 38.462 0.00 0.00 32.81 2.74
1501 1522 1.810030 CGGCGCCTGTTCTTACTCC 60.810 63.158 26.68 0.00 0.00 3.85
1574 1595 2.358247 CCAACCTGAACGGGACCG 60.358 66.667 9.56 9.56 46.03 4.79
1604 1625 4.271816 CCGTCATCTCCCTCGGCG 62.272 72.222 0.00 0.00 36.68 6.46
1675 1696 9.574516 ACATTTTTATTCCTAGTTGAGACACTT 57.425 29.630 0.00 0.00 0.00 3.16
1682 1703 7.884816 TTCCTAGTTGAGACACTTATTTTCG 57.115 36.000 0.00 0.00 0.00 3.46
1683 1704 6.395629 TCCTAGTTGAGACACTTATTTTCGG 58.604 40.000 0.00 0.00 0.00 4.30
1684 1705 6.209986 TCCTAGTTGAGACACTTATTTTCGGA 59.790 38.462 0.00 0.00 0.00 4.55
1685 1706 6.310711 CCTAGTTGAGACACTTATTTTCGGAC 59.689 42.308 0.00 0.00 0.00 4.79
1686 1707 4.684703 AGTTGAGACACTTATTTTCGGACG 59.315 41.667 0.00 0.00 0.00 4.79
1687 1708 3.581755 TGAGACACTTATTTTCGGACGG 58.418 45.455 0.00 0.00 0.00 4.79
1688 1709 3.256383 TGAGACACTTATTTTCGGACGGA 59.744 43.478 0.00 0.00 0.00 4.69
1689 1710 3.846360 AGACACTTATTTTCGGACGGAG 58.154 45.455 0.00 0.00 0.00 4.63
1706 1736 3.067106 CGGAGTGAGTACAATGTTGCTT 58.933 45.455 0.00 0.00 0.00 3.91
1731 1761 4.728882 GCAATTCAAGCGAGGTGTTCATAG 60.729 45.833 0.00 0.00 0.00 2.23
1745 1775 6.211584 AGGTGTTCATAGAGTTCATACTGTGT 59.788 38.462 0.00 0.00 33.84 3.72
1904 1942 3.684305 TCCACAGCAAACACGATGATTAG 59.316 43.478 0.00 0.00 0.00 1.73
1935 1973 9.658799 TTCTTCTCCTAGAACATAGAAAATGTG 57.341 33.333 0.00 0.00 29.89 3.21
1936 1974 9.035890 TCTTCTCCTAGAACATAGAAAATGTGA 57.964 33.333 0.00 0.00 29.89 3.58
1937 1975 9.829507 CTTCTCCTAGAACATAGAAAATGTGAT 57.170 33.333 0.00 0.00 29.89 3.06
1986 2024 8.803235 GGAAGGTGTTCTTTTGGAAATATAGTT 58.197 33.333 0.00 0.00 35.50 2.24
2006 2044 4.222145 AGTTTAGAACCCATTCGCTCTACA 59.778 41.667 0.00 0.00 40.04 2.74
2099 2137 5.698832 GAGACTCTAATCATGGATGTCTCG 58.301 45.833 0.00 0.00 39.29 4.04
2134 2173 9.427821 AGGAACAAGAATGTCTCAGTATATACT 57.572 33.333 9.71 9.71 39.40 2.12
2140 2179 9.642343 AAGAATGTCTCAGTATATACTACCACA 57.358 33.333 15.03 15.93 34.13 4.17
2145 2184 6.654161 GTCTCAGTATATACTACCACATCCGT 59.346 42.308 15.03 0.00 34.13 4.69
2146 2185 7.821359 GTCTCAGTATATACTACCACATCCGTA 59.179 40.741 15.03 0.00 34.13 4.02
2150 2189 7.175467 CAGTATATACTACCACATCCGTACCAA 59.825 40.741 15.03 0.00 34.13 3.67
2152 2191 5.680594 ATACTACCACATCCGTACCAAAA 57.319 39.130 0.00 0.00 0.00 2.44
2155 2194 6.243216 ACTACCACATCCGTACCAAAATAT 57.757 37.500 0.00 0.00 0.00 1.28
2157 2196 7.794041 ACTACCACATCCGTACCAAAATATAA 58.206 34.615 0.00 0.00 0.00 0.98
2159 2198 6.891388 ACCACATCCGTACCAAAATATAAGA 58.109 36.000 0.00 0.00 0.00 2.10
2160 2199 6.764560 ACCACATCCGTACCAAAATATAAGAC 59.235 38.462 0.00 0.00 0.00 3.01
2162 2201 6.477688 CACATCCGTACCAAAATATAAGACGT 59.522 38.462 0.00 0.00 0.00 4.34
2163 2202 7.010738 CACATCCGTACCAAAATATAAGACGTT 59.989 37.037 0.00 0.00 0.00 3.99
2164 2203 7.550196 ACATCCGTACCAAAATATAAGACGTTT 59.450 33.333 0.00 0.00 0.00 3.60
2166 2205 8.321650 TCCGTACCAAAATATAAGACGTTTTT 57.678 30.769 0.00 0.00 0.00 1.94
2167 2206 8.229137 TCCGTACCAAAATATAAGACGTTTTTG 58.771 33.333 11.96 11.96 38.28 2.44
2169 2208 9.043678 CGTACCAAAATATAAGACGTTTTTGTC 57.956 33.333 15.79 8.11 37.36 3.18
2170 2209 9.043678 GTACCAAAATATAAGACGTTTTTGTCG 57.956 33.333 15.79 7.45 43.70 4.35
2171 2210 7.079475 ACCAAAATATAAGACGTTTTTGTCGG 58.921 34.615 15.79 6.99 43.70 4.79
2172 2211 6.033091 CCAAAATATAAGACGTTTTTGTCGGC 59.967 38.462 15.79 0.00 43.70 5.54
2174 2213 7.599630 AAATATAAGACGTTTTTGTCGGCTA 57.400 32.000 0.00 0.00 46.42 3.93
2176 2215 5.927954 ATAAGACGTTTTTGTCGGCTAAA 57.072 34.783 0.00 0.00 46.42 1.85
2177 2216 3.597377 AGACGTTTTTGTCGGCTAAAC 57.403 42.857 0.00 2.47 45.23 2.01
2178 2217 3.200483 AGACGTTTTTGTCGGCTAAACT 58.800 40.909 13.62 0.00 45.23 2.66
2217 2268 7.899178 TCTTACATTTTGATAAGAAGTGCGA 57.101 32.000 0.00 0.00 35.08 5.10
2237 2288 7.716998 AGTGCGATTCCAGTTTGAATATCTTAT 59.283 33.333 0.00 0.00 35.15 1.73
2238 2289 7.800380 GTGCGATTCCAGTTTGAATATCTTATG 59.200 37.037 0.00 0.00 35.15 1.90
2324 2377 2.046314 GGTGTATGCCAGCCGTGT 60.046 61.111 0.00 0.00 35.48 4.49
2378 2438 4.320953 GTGCTGCTGCGTTATTTTTAGTTC 59.679 41.667 11.21 0.00 43.34 3.01
2385 2445 7.690637 TGCTGCGTTATTTTTAGTTCTATTTCG 59.309 33.333 0.00 0.00 0.00 3.46
2430 2490 6.178324 AGAGCACGGCATACATATAGTAGTA 58.822 40.000 0.00 0.00 35.85 1.82
2432 2492 5.944599 AGCACGGCATACATATAGTAGTACT 59.055 40.000 8.14 8.14 35.85 2.73
2434 2494 6.552629 CACGGCATACATATAGTAGTACTGG 58.447 44.000 13.29 2.79 35.85 4.00
2435 2495 5.125097 ACGGCATACATATAGTAGTACTGGC 59.875 44.000 13.29 5.82 35.85 4.85
2437 2497 5.450137 GGCATACATATAGTAGTACTGGCCG 60.450 48.000 13.29 2.06 35.85 6.13
2439 2499 2.824341 ACATATAGTAGTACTGGCCGGC 59.176 50.000 21.18 21.18 0.00 6.13
2440 2500 2.965671 TATAGTAGTACTGGCCGGCT 57.034 50.000 28.56 9.55 0.00 5.52
2441 2501 2.083628 ATAGTAGTACTGGCCGGCTT 57.916 50.000 28.56 13.73 0.00 4.35
2442 2502 1.856629 TAGTAGTACTGGCCGGCTTT 58.143 50.000 28.56 13.34 0.00 3.51
2443 2503 0.249398 AGTAGTACTGGCCGGCTTTG 59.751 55.000 28.56 18.45 0.00 2.77
2444 2504 1.078708 TAGTACTGGCCGGCTTTGC 60.079 57.895 28.56 14.10 0.00 3.68
2474 2534 0.953960 ATCTTTCGGAACCGTGGCAC 60.954 55.000 7.79 7.79 40.74 5.01
2482 2542 1.541670 GGAACCGTGGCACAAAGTAGA 60.542 52.381 19.09 0.00 44.16 2.59
2493 2553 5.709631 TGGCACAAAGTAGAAGCATCATAAA 59.290 36.000 0.00 0.00 31.92 1.40
2494 2554 6.208402 TGGCACAAAGTAGAAGCATCATAAAA 59.792 34.615 0.00 0.00 31.92 1.52
2531 2596 1.271054 CCCAGAAAGACAGTGGTCCAG 60.271 57.143 0.00 0.00 45.48 3.86
2569 2634 3.127533 GTGCACCTGACGCCATCC 61.128 66.667 5.22 0.00 0.00 3.51
2573 2638 1.884464 CACCTGACGCCATCCATCG 60.884 63.158 0.00 0.00 0.00 3.84
2602 2667 5.240891 TCAGGCTTTGAATAGTGAACTGAG 58.759 41.667 0.00 0.00 31.34 3.35
2609 2674 3.691118 TGAATAGTGAACTGAGCAATGGC 59.309 43.478 0.00 0.00 41.61 4.40
2630 2695 1.198637 CTGCAGGCTGTCAAAAGTAGC 59.801 52.381 17.16 0.00 36.74 3.58
2670 2735 1.860676 GCATATGTTTGCATGCAGGG 58.139 50.000 21.50 7.57 45.51 4.45
2671 2736 1.539496 GCATATGTTTGCATGCAGGGG 60.539 52.381 21.50 8.59 45.51 4.79
2672 2737 0.754472 ATATGTTTGCATGCAGGGGC 59.246 50.000 21.50 12.40 41.68 5.80
2673 2738 1.329171 TATGTTTGCATGCAGGGGCC 61.329 55.000 21.50 8.62 40.13 5.80
2674 2739 4.440127 GTTTGCATGCAGGGGCCG 62.440 66.667 21.50 0.00 40.13 6.13
2699 2764 2.037511 AGCATCATAGCCAGCTTCTCTC 59.962 50.000 0.00 0.00 32.52 3.20
2707 2772 0.795085 CCAGCTTCTCTCAAGCAACG 59.205 55.000 8.94 0.00 45.30 4.10
2712 2777 0.387929 TTCTCTCAAGCAACGACCGT 59.612 50.000 0.00 0.00 0.00 4.83
2775 2847 4.516698 CCTACCTGGCACAAACATCATATC 59.483 45.833 0.00 0.00 38.70 1.63
2783 2855 7.537715 TGGCACAAACATCATATCAACTTTAG 58.462 34.615 0.00 0.00 31.92 1.85
2804 2917 3.446184 CTGCTCAGCAAGTTTCTTACG 57.554 47.619 0.00 0.00 38.41 3.18
2833 2946 2.284150 TGAAACTGAGACGTTTTCAGCG 59.716 45.455 23.16 8.92 44.63 5.18
2849 2976 3.342719 TCAGCGAAAACAAGATATGCCA 58.657 40.909 0.00 0.00 0.00 4.92
2851 2978 3.853671 CAGCGAAAACAAGATATGCCAAC 59.146 43.478 0.00 0.00 0.00 3.77
2887 3016 1.802960 CAGAGACGTGCTTGCTCAAAT 59.197 47.619 0.00 0.00 0.00 2.32
2976 3107 1.590238 CGCAAAGTCATCGGATCTGTC 59.410 52.381 0.42 0.00 0.00 3.51
2980 3111 4.678044 GCAAAGTCATCGGATCTGTCACTA 60.678 45.833 0.42 0.00 0.00 2.74
3000 3131 1.236628 TAGCTATCCTCGCCGAAGAC 58.763 55.000 0.00 0.00 0.00 3.01
3095 3226 0.463474 GCCTTCCTCATCTCAGTGCC 60.463 60.000 0.00 0.00 0.00 5.01
3108 3239 1.827344 TCAGTGCCTCATCACAGTAGG 59.173 52.381 0.00 0.00 39.35 3.18
3130 3261 1.095228 CCGCATGTACAATCCCGCTT 61.095 55.000 0.00 0.00 0.00 4.68
3139 3270 2.577700 ACAATCCCGCTTACAACACAA 58.422 42.857 0.00 0.00 0.00 3.33
3220 3351 7.388776 TCTGACAGGTAACATTGATTTGAGAAG 59.611 37.037 1.81 0.00 41.41 2.85
3388 3519 1.195347 CTCTGCACGCTACAATCGAG 58.805 55.000 0.00 0.00 0.00 4.04
3400 3531 4.268884 GCTACAATCGAGTTTCCTCATGAC 59.731 45.833 0.00 0.00 37.59 3.06
3532 3714 0.321671 TGGAGAGGTCTTTCTTGCGG 59.678 55.000 0.00 0.00 0.00 5.69
4110 4293 9.541143 CAAAATGGTAAACTATTTTCTGTTGGT 57.459 29.630 12.55 0.00 42.53 3.67
4202 4385 5.373812 AGATAAATCACACCCCTAGTTGG 57.626 43.478 0.00 0.00 0.00 3.77
4248 4431 4.084745 TCGATGTGTACGCTTTCTGAAAAC 60.085 41.667 8.10 0.00 0.00 2.43
4284 4467 5.047802 CAGTCACATGCCTAATTGGAAAACT 60.048 40.000 0.00 0.00 38.35 2.66
4381 4565 5.486735 TTGATACTCCTTCACGGGTAAAA 57.513 39.130 0.00 0.00 0.00 1.52
4465 4649 6.111382 TGTTTTCATCTTCCATGTTGCAAAA 58.889 32.000 0.00 0.00 0.00 2.44
4466 4650 6.036953 TGTTTTCATCTTCCATGTTGCAAAAC 59.963 34.615 0.00 0.00 33.69 2.43
4467 4651 5.534207 TTCATCTTCCATGTTGCAAAACT 57.466 34.783 0.00 0.00 0.00 2.66
4476 4660 9.341899 CTTCCATGTTGCAAAACTACTATTTAC 57.658 33.333 0.00 0.00 0.00 2.01
4589 4773 0.962855 TCTAGAGACAGCGCTGCAGT 60.963 55.000 36.28 21.30 0.00 4.40
4707 4891 1.238439 CTTGTACAAGCAGGTGGGTG 58.762 55.000 22.03 0.00 0.00 4.61
4776 4960 7.467267 GCAGAACAGACAACATAAAGACAGAAA 60.467 37.037 0.00 0.00 0.00 2.52
4815 5006 6.147821 ACTGACTATCACATTTCAACCTTTCG 59.852 38.462 0.00 0.00 0.00 3.46
4861 5052 0.837691 ACCAGTGTGAGCATCCCAGA 60.838 55.000 0.00 0.00 0.00 3.86
4868 5059 5.008415 CAGTGTGAGCATCCCAGATAATTTC 59.992 44.000 0.00 0.00 0.00 2.17
4983 5174 7.680730 AGTTTTTCACTGTGATACTAGGTGAT 58.319 34.615 11.86 0.00 36.90 3.06
5070 5261 3.819902 TCAATTGCGCTATTGGCATATCA 59.180 39.130 33.50 16.95 40.62 2.15
5141 5332 4.807304 AGACGACGTAACAGTCAAATGTTT 59.193 37.500 0.00 0.00 40.47 2.83
5371 5562 3.512724 AGCCTTTAATGCAAGCATCTGTT 59.487 39.130 8.14 0.00 35.31 3.16
5498 5689 8.722480 TCCATGATTCTGACATGTAGTAAAAG 57.278 34.615 0.00 0.00 42.16 2.27
5679 5910 8.669243 GTGAACAACAAACAAAATTCCCATTTA 58.331 29.630 0.00 0.00 31.89 1.40
5924 6155 6.932356 ATGTTTATCCAGCACAAGATGTAG 57.068 37.500 0.00 0.00 0.00 2.74
6031 6262 0.253044 GCAACTGAGGAGGTATGCCA 59.747 55.000 1.54 0.00 37.19 4.92
6145 6376 3.985019 TCTAACCATTCGCCCACTTTA 57.015 42.857 0.00 0.00 0.00 1.85
6190 6421 6.500684 TCCAGCATTCAGAAGTTATTTCAC 57.499 37.500 0.00 0.00 38.31 3.18
6192 6423 5.327091 CAGCATTCAGAAGTTATTTCACCG 58.673 41.667 0.00 0.00 38.31 4.94
6365 6596 9.801873 CAACCCTCAATTAATGTAAACAATAGG 57.198 33.333 0.00 0.00 0.00 2.57
6494 6725 1.619827 CAAGATTTTGGAGGCTGCCAA 59.380 47.619 22.65 12.50 45.77 4.52
6600 6831 6.245408 AGAAAACCACCTGCATATTTCTGTA 58.755 36.000 0.00 0.00 36.19 2.74
6608 6839 5.409520 ACCTGCATATTTCTGTATACGCATG 59.590 40.000 0.00 0.00 0.00 4.06
7233 7465 9.748708 CTTTGATTCTTGTTCCTTTGTAATCAA 57.251 29.630 0.00 0.00 39.05 2.57
7256 7488 3.330701 AGTGAGGGCCTTGACATCTAAAA 59.669 43.478 7.89 0.00 0.00 1.52
7275 7507 1.738099 CCCCAGCGAGTTCGTTCAG 60.738 63.158 3.27 0.00 42.22 3.02
7373 7605 8.162746 ACACATTTCCCATTCAAAATTAACCAT 58.837 29.630 0.00 0.00 0.00 3.55
7374 7606 9.664332 CACATTTCCCATTCAAAATTAACCATA 57.336 29.630 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.303282 GCACGTTGTTGTGGGAATATTTT 58.697 39.130 0.00 0.00 40.26 1.82
1 2 3.908213 GCACGTTGTTGTGGGAATATTT 58.092 40.909 0.00 0.00 40.26 1.40
2 3 3.569250 GCACGTTGTTGTGGGAATATT 57.431 42.857 0.00 0.00 40.26 1.28
9 10 3.959975 CCCCGCACGTTGTTGTGG 61.960 66.667 0.00 0.00 45.39 4.17
10 11 4.622456 GCCCCGCACGTTGTTGTG 62.622 66.667 0.00 0.00 42.81 3.33
12 13 3.609214 GATGCCCCGCACGTTGTTG 62.609 63.158 0.00 0.00 43.04 3.33
13 14 3.361977 GATGCCCCGCACGTTGTT 61.362 61.111 0.00 0.00 43.04 2.83
14 15 3.918253 ATGATGCCCCGCACGTTGT 62.918 57.895 0.00 0.00 43.04 3.32
15 16 3.112126 GATGATGCCCCGCACGTTG 62.112 63.158 0.00 0.00 43.04 4.10
16 17 1.966901 TAGATGATGCCCCGCACGTT 61.967 55.000 0.00 0.00 43.04 3.99
17 18 2.369257 CTAGATGATGCCCCGCACGT 62.369 60.000 0.00 0.00 43.04 4.49
18 19 1.665916 CTAGATGATGCCCCGCACG 60.666 63.158 0.00 0.00 43.04 5.34
19 20 0.179045 AACTAGATGATGCCCCGCAC 60.179 55.000 0.00 0.00 43.04 5.34
20 21 0.179048 CAACTAGATGATGCCCCGCA 60.179 55.000 0.00 0.00 44.86 5.69
21 22 0.179045 ACAACTAGATGATGCCCCGC 60.179 55.000 7.05 0.00 0.00 6.13
22 23 1.942657 CAACAACTAGATGATGCCCCG 59.057 52.381 7.05 0.00 0.00 5.73
23 24 3.004752 ACAACAACTAGATGATGCCCC 57.995 47.619 7.05 0.00 0.00 5.80
24 25 5.066505 CCTTTACAACAACTAGATGATGCCC 59.933 44.000 7.05 0.00 0.00 5.36
25 26 5.648092 ACCTTTACAACAACTAGATGATGCC 59.352 40.000 7.05 0.00 0.00 4.40
26 27 6.743575 ACCTTTACAACAACTAGATGATGC 57.256 37.500 7.05 0.00 0.00 3.91
27 28 7.023575 GCAACCTTTACAACAACTAGATGATG 58.976 38.462 7.05 7.83 0.00 3.07
28 29 6.128282 CGCAACCTTTACAACAACTAGATGAT 60.128 38.462 7.05 0.00 0.00 2.45
29 30 5.178623 CGCAACCTTTACAACAACTAGATGA 59.821 40.000 7.05 0.00 0.00 2.92
30 31 5.382303 CGCAACCTTTACAACAACTAGATG 58.618 41.667 0.00 0.00 0.00 2.90
31 32 4.454504 CCGCAACCTTTACAACAACTAGAT 59.545 41.667 0.00 0.00 0.00 1.98
32 33 3.810941 CCGCAACCTTTACAACAACTAGA 59.189 43.478 0.00 0.00 0.00 2.43
33 34 3.608474 GCCGCAACCTTTACAACAACTAG 60.608 47.826 0.00 0.00 0.00 2.57
34 35 2.291190 GCCGCAACCTTTACAACAACTA 59.709 45.455 0.00 0.00 0.00 2.24
35 36 1.066454 GCCGCAACCTTTACAACAACT 59.934 47.619 0.00 0.00 0.00 3.16
36 37 1.066454 AGCCGCAACCTTTACAACAAC 59.934 47.619 0.00 0.00 0.00 3.32
37 38 1.066303 CAGCCGCAACCTTTACAACAA 59.934 47.619 0.00 0.00 0.00 2.83
38 39 0.665835 CAGCCGCAACCTTTACAACA 59.334 50.000 0.00 0.00 0.00 3.33
39 40 0.948678 TCAGCCGCAACCTTTACAAC 59.051 50.000 0.00 0.00 0.00 3.32
40 41 0.948678 GTCAGCCGCAACCTTTACAA 59.051 50.000 0.00 0.00 0.00 2.41
41 42 1.225376 CGTCAGCCGCAACCTTTACA 61.225 55.000 0.00 0.00 0.00 2.41
42 43 1.226030 ACGTCAGCCGCAACCTTTAC 61.226 55.000 0.00 0.00 41.42 2.01
43 44 1.070105 ACGTCAGCCGCAACCTTTA 59.930 52.632 0.00 0.00 41.42 1.85
74 75 1.583967 CTCGCGTGAGACATCCGTC 60.584 63.158 21.40 0.00 45.57 4.79
96 114 6.818644 CCGGGTTATGAATCAATTAGATCGAT 59.181 38.462 0.00 0.00 35.39 3.59
109 127 2.815158 ACTTTTGGCCGGGTTATGAAT 58.185 42.857 2.18 0.00 0.00 2.57
112 130 3.759618 TCTTTACTTTTGGCCGGGTTATG 59.240 43.478 2.18 0.00 0.00 1.90
113 131 4.036941 TCTTTACTTTTGGCCGGGTTAT 57.963 40.909 2.18 0.00 0.00 1.89
139 157 8.514594 GCCGGATTATGAATCAATAAGATCAAA 58.485 33.333 5.05 0.00 39.71 2.69
140 158 7.121168 GGCCGGATTATGAATCAATAAGATCAA 59.879 37.037 5.05 0.00 39.71 2.57
141 159 6.599244 GGCCGGATTATGAATCAATAAGATCA 59.401 38.462 5.05 0.00 39.71 2.92
142 160 6.599244 TGGCCGGATTATGAATCAATAAGATC 59.401 38.462 5.05 0.00 39.71 2.75
143 161 6.484288 TGGCCGGATTATGAATCAATAAGAT 58.516 36.000 5.05 0.00 39.71 2.40
144 162 5.875224 TGGCCGGATTATGAATCAATAAGA 58.125 37.500 5.05 0.00 39.71 2.10
145 163 6.573664 TTGGCCGGATTATGAATCAATAAG 57.426 37.500 5.05 0.00 39.71 1.73
146 164 6.968263 TTTGGCCGGATTATGAATCAATAA 57.032 33.333 5.05 0.00 39.71 1.40
147 165 6.549364 ACTTTTGGCCGGATTATGAATCAATA 59.451 34.615 5.05 0.00 39.71 1.90
148 166 5.363580 ACTTTTGGCCGGATTATGAATCAAT 59.636 36.000 5.05 0.00 39.71 2.57
149 167 4.709397 ACTTTTGGCCGGATTATGAATCAA 59.291 37.500 5.05 0.00 39.71 2.57
150 168 4.277476 ACTTTTGGCCGGATTATGAATCA 58.723 39.130 5.05 0.00 39.71 2.57
151 169 4.918810 ACTTTTGGCCGGATTATGAATC 57.081 40.909 5.05 0.00 37.17 2.52
152 170 6.605594 TCTTTACTTTTGGCCGGATTATGAAT 59.394 34.615 5.05 0.00 0.00 2.57
153 171 5.946972 TCTTTACTTTTGGCCGGATTATGAA 59.053 36.000 5.05 0.00 0.00 2.57
154 172 5.502079 TCTTTACTTTTGGCCGGATTATGA 58.498 37.500 5.05 0.00 0.00 2.15
155 173 5.828299 TCTTTACTTTTGGCCGGATTATG 57.172 39.130 5.05 0.00 0.00 1.90
156 174 6.127451 CCTTTCTTTACTTTTGGCCGGATTAT 60.127 38.462 5.05 0.00 0.00 1.28
157 175 5.184287 CCTTTCTTTACTTTTGGCCGGATTA 59.816 40.000 5.05 0.00 0.00 1.75
158 176 4.021456 CCTTTCTTTACTTTTGGCCGGATT 60.021 41.667 5.05 0.00 0.00 3.01
159 177 3.509967 CCTTTCTTTACTTTTGGCCGGAT 59.490 43.478 5.05 0.00 0.00 4.18
160 178 2.888414 CCTTTCTTTACTTTTGGCCGGA 59.112 45.455 5.05 0.00 0.00 5.14
161 179 2.626266 ACCTTTCTTTACTTTTGGCCGG 59.374 45.455 0.00 0.00 0.00 6.13
162 180 5.441709 TTACCTTTCTTTACTTTTGGCCG 57.558 39.130 0.00 0.00 0.00 6.13
163 181 5.688621 CGTTTACCTTTCTTTACTTTTGGCC 59.311 40.000 0.00 0.00 0.00 5.36
164 182 6.267817 ACGTTTACCTTTCTTTACTTTTGGC 58.732 36.000 0.00 0.00 0.00 4.52
165 183 6.914215 GGACGTTTACCTTTCTTTACTTTTGG 59.086 38.462 0.00 0.00 0.00 3.28
166 184 7.700505 AGGACGTTTACCTTTCTTTACTTTTG 58.299 34.615 0.00 0.00 33.55 2.44
167 185 7.553760 TGAGGACGTTTACCTTTCTTTACTTTT 59.446 33.333 0.00 0.00 37.93 2.27
168 186 7.049754 TGAGGACGTTTACCTTTCTTTACTTT 58.950 34.615 0.00 0.00 37.93 2.66
169 187 6.585416 TGAGGACGTTTACCTTTCTTTACTT 58.415 36.000 0.00 0.00 37.93 2.24
199 217 1.081174 AGGATCCCAACCCTTCTCTCA 59.919 52.381 8.55 0.00 0.00 3.27
201 219 1.367848 AGAGGATCCCAACCCTTCTCT 59.632 52.381 8.55 0.00 33.66 3.10
202 220 1.488393 CAGAGGATCCCAACCCTTCTC 59.512 57.143 8.55 0.00 33.66 2.87
203 221 1.589414 CAGAGGATCCCAACCCTTCT 58.411 55.000 8.55 0.00 33.66 2.85
204 222 0.106967 GCAGAGGATCCCAACCCTTC 60.107 60.000 8.55 0.00 33.66 3.46
205 223 0.846427 TGCAGAGGATCCCAACCCTT 60.846 55.000 8.55 0.00 33.66 3.95
206 224 1.229951 TGCAGAGGATCCCAACCCT 60.230 57.895 8.55 0.00 33.66 4.34
207 225 1.225704 CTGCAGAGGATCCCAACCC 59.774 63.158 8.42 0.00 33.66 4.11
208 226 1.134371 GTACTGCAGAGGATCCCAACC 60.134 57.143 23.35 0.00 33.66 3.77
209 227 1.834263 AGTACTGCAGAGGATCCCAAC 59.166 52.381 23.35 0.17 33.66 3.77
210 228 1.833630 CAGTACTGCAGAGGATCCCAA 59.166 52.381 23.35 0.00 33.66 4.12
211 229 1.273267 ACAGTACTGCAGAGGATCCCA 60.273 52.381 23.35 0.00 33.66 4.37
212 230 1.490574 ACAGTACTGCAGAGGATCCC 58.509 55.000 23.35 0.00 33.66 3.85
213 231 3.006323 CCATACAGTACTGCAGAGGATCC 59.994 52.174 23.35 2.48 33.66 3.36
214 232 3.639094 ACCATACAGTACTGCAGAGGATC 59.361 47.826 23.35 5.55 0.00 3.36
215 233 3.647636 ACCATACAGTACTGCAGAGGAT 58.352 45.455 23.35 6.42 0.00 3.24
216 234 3.101643 ACCATACAGTACTGCAGAGGA 57.898 47.619 23.35 4.04 0.00 3.71
217 235 3.699538 TGTACCATACAGTACTGCAGAGG 59.300 47.826 23.35 19.78 42.58 3.69
218 236 4.983671 TGTACCATACAGTACTGCAGAG 57.016 45.455 23.35 11.80 42.58 3.35
229 247 4.461431 CCAGTGACTGTACTGTACCATACA 59.539 45.833 12.15 7.58 45.12 2.29
230 248 4.677250 GCCAGTGACTGTACTGTACCATAC 60.677 50.000 12.15 8.94 45.12 2.39
231 249 3.446161 GCCAGTGACTGTACTGTACCATA 59.554 47.826 12.15 0.00 45.12 2.74
232 250 2.233922 GCCAGTGACTGTACTGTACCAT 59.766 50.000 12.15 3.33 45.12 3.55
233 251 1.616865 GCCAGTGACTGTACTGTACCA 59.383 52.381 12.15 3.68 45.12 3.25
234 252 1.616865 TGCCAGTGACTGTACTGTACC 59.383 52.381 12.15 1.09 45.12 3.34
235 253 3.254060 CATGCCAGTGACTGTACTGTAC 58.746 50.000 12.15 10.98 45.12 2.90
236 254 2.897326 ACATGCCAGTGACTGTACTGTA 59.103 45.455 12.15 0.00 45.12 2.74
237 255 1.694150 ACATGCCAGTGACTGTACTGT 59.306 47.619 12.15 4.92 45.12 3.55
238 256 2.071540 CACATGCCAGTGACTGTACTG 58.928 52.381 12.15 7.76 45.93 2.74
239 257 1.002430 CCACATGCCAGTGACTGTACT 59.998 52.381 12.15 0.00 42.05 2.73
240 258 1.001974 TCCACATGCCAGTGACTGTAC 59.998 52.381 12.15 3.90 42.05 2.90
241 259 1.001974 GTCCACATGCCAGTGACTGTA 59.998 52.381 12.15 0.34 42.05 2.74
242 260 0.250467 GTCCACATGCCAGTGACTGT 60.250 55.000 12.15 0.00 42.05 3.55
243 261 0.957395 GGTCCACATGCCAGTGACTG 60.957 60.000 5.42 5.42 42.05 3.51
244 262 1.376466 GGTCCACATGCCAGTGACT 59.624 57.895 7.16 0.00 42.05 3.41
245 263 1.675641 GGGTCCACATGCCAGTGAC 60.676 63.158 7.16 4.17 42.05 3.67
246 264 2.756400 GGGTCCACATGCCAGTGA 59.244 61.111 7.16 0.00 42.05 3.41
247 265 2.747460 CGGGTCCACATGCCAGTG 60.747 66.667 0.00 0.00 39.21 3.66
248 266 4.033776 CCGGGTCCACATGCCAGT 62.034 66.667 0.00 0.00 0.00 4.00
259 277 4.796495 GACATGTGGGGCCGGGTC 62.796 72.222 1.15 0.00 0.00 4.46
261 279 4.127744 ATGACATGTGGGGCCGGG 62.128 66.667 1.15 0.00 0.00 5.73
262 280 2.516930 GATGACATGTGGGGCCGG 60.517 66.667 1.15 0.00 0.00 6.13
263 281 2.516930 GGATGACATGTGGGGCCG 60.517 66.667 1.15 0.00 0.00 6.13
264 282 1.152881 GAGGATGACATGTGGGGCC 60.153 63.158 1.15 0.00 0.00 5.80
265 283 0.749454 GTGAGGATGACATGTGGGGC 60.749 60.000 1.15 0.00 0.00 5.80
266 284 0.914644 AGTGAGGATGACATGTGGGG 59.085 55.000 1.15 0.00 0.00 4.96
267 285 2.501316 TGTAGTGAGGATGACATGTGGG 59.499 50.000 1.15 0.00 0.00 4.61
268 286 3.790091 CTGTAGTGAGGATGACATGTGG 58.210 50.000 1.15 0.00 0.00 4.17
269 287 3.193263 GCTGTAGTGAGGATGACATGTG 58.807 50.000 1.15 0.00 0.00 3.21
270 288 2.833943 TGCTGTAGTGAGGATGACATGT 59.166 45.455 0.00 0.00 0.00 3.21
271 289 3.193263 GTGCTGTAGTGAGGATGACATG 58.807 50.000 0.00 0.00 0.00 3.21
272 290 2.169352 GGTGCTGTAGTGAGGATGACAT 59.831 50.000 0.00 0.00 0.00 3.06
273 291 1.550524 GGTGCTGTAGTGAGGATGACA 59.449 52.381 0.00 0.00 0.00 3.58
274 292 1.550524 TGGTGCTGTAGTGAGGATGAC 59.449 52.381 0.00 0.00 0.00 3.06
275 293 1.937191 TGGTGCTGTAGTGAGGATGA 58.063 50.000 0.00 0.00 0.00 2.92
276 294 2.996249 ATGGTGCTGTAGTGAGGATG 57.004 50.000 0.00 0.00 0.00 3.51
277 295 3.374764 TGTATGGTGCTGTAGTGAGGAT 58.625 45.455 0.00 0.00 0.00 3.24
278 296 2.815158 TGTATGGTGCTGTAGTGAGGA 58.185 47.619 0.00 0.00 0.00 3.71
279 297 3.610040 TTGTATGGTGCTGTAGTGAGG 57.390 47.619 0.00 0.00 0.00 3.86
280 298 5.750547 CAGTATTGTATGGTGCTGTAGTGAG 59.249 44.000 0.00 0.00 0.00 3.51
281 299 5.660460 CAGTATTGTATGGTGCTGTAGTGA 58.340 41.667 0.00 0.00 0.00 3.41
282 300 4.271049 GCAGTATTGTATGGTGCTGTAGTG 59.729 45.833 0.00 0.00 0.00 2.74
283 301 4.081142 TGCAGTATTGTATGGTGCTGTAGT 60.081 41.667 0.00 0.00 35.11 2.73
284 302 4.441792 TGCAGTATTGTATGGTGCTGTAG 58.558 43.478 0.00 0.00 35.11 2.74
285 303 4.161377 TCTGCAGTATTGTATGGTGCTGTA 59.839 41.667 14.67 0.00 35.35 2.74
286 304 3.055167 TCTGCAGTATTGTATGGTGCTGT 60.055 43.478 14.67 0.00 35.35 4.40
287 305 3.534554 TCTGCAGTATTGTATGGTGCTG 58.465 45.455 14.67 0.00 35.11 4.41
288 306 3.432749 CCTCTGCAGTATTGTATGGTGCT 60.433 47.826 14.67 0.00 35.11 4.40
289 307 2.874701 CCTCTGCAGTATTGTATGGTGC 59.125 50.000 14.67 0.00 34.62 5.01
290 308 4.406648 TCCTCTGCAGTATTGTATGGTG 57.593 45.455 14.67 0.00 0.00 4.17
291 309 4.040952 GGATCCTCTGCAGTATTGTATGGT 59.959 45.833 14.67 0.00 0.00 3.55
292 310 4.564406 GGGATCCTCTGCAGTATTGTATGG 60.564 50.000 14.67 4.81 0.00 2.74
293 311 4.040829 TGGGATCCTCTGCAGTATTGTATG 59.959 45.833 14.67 0.00 0.00 2.39
294 312 4.234550 TGGGATCCTCTGCAGTATTGTAT 58.765 43.478 14.67 0.23 0.00 2.29
295 313 3.653164 TGGGATCCTCTGCAGTATTGTA 58.347 45.455 14.67 0.00 0.00 2.41
296 314 2.481441 TGGGATCCTCTGCAGTATTGT 58.519 47.619 14.67 0.00 0.00 2.71
297 315 3.209410 GTTGGGATCCTCTGCAGTATTG 58.791 50.000 14.67 2.90 0.00 1.90
298 316 2.173569 GGTTGGGATCCTCTGCAGTATT 59.826 50.000 14.67 0.00 0.00 1.89
299 317 1.771255 GGTTGGGATCCTCTGCAGTAT 59.229 52.381 14.67 6.15 0.00 2.12
300 318 1.204146 GGTTGGGATCCTCTGCAGTA 58.796 55.000 14.67 0.81 0.00 2.74
301 319 1.566298 GGGTTGGGATCCTCTGCAGT 61.566 60.000 14.67 0.00 0.00 4.40
302 320 1.225704 GGGTTGGGATCCTCTGCAG 59.774 63.158 12.58 7.63 0.00 4.41
303 321 2.308722 GGGGTTGGGATCCTCTGCA 61.309 63.158 12.58 0.00 0.00 4.41
304 322 1.863155 TTGGGGTTGGGATCCTCTGC 61.863 60.000 12.58 0.00 0.00 4.26
305 323 0.257039 CTTGGGGTTGGGATCCTCTG 59.743 60.000 12.58 0.00 0.00 3.35
306 324 0.121197 TCTTGGGGTTGGGATCCTCT 59.879 55.000 12.58 0.00 0.00 3.69
307 325 0.548510 CTCTTGGGGTTGGGATCCTC 59.451 60.000 12.58 2.25 0.00 3.71
308 326 0.121197 TCTCTTGGGGTTGGGATCCT 59.879 55.000 12.58 0.00 0.00 3.24
309 327 0.999712 TTCTCTTGGGGTTGGGATCC 59.000 55.000 1.92 1.92 0.00 3.36
310 328 1.636003 ACTTCTCTTGGGGTTGGGATC 59.364 52.381 0.00 0.00 0.00 3.36
311 329 1.760405 ACTTCTCTTGGGGTTGGGAT 58.240 50.000 0.00 0.00 0.00 3.85
312 330 1.982958 GTACTTCTCTTGGGGTTGGGA 59.017 52.381 0.00 0.00 0.00 4.37
313 331 1.985895 AGTACTTCTCTTGGGGTTGGG 59.014 52.381 0.00 0.00 0.00 4.12
314 332 3.790089 AAGTACTTCTCTTGGGGTTGG 57.210 47.619 1.12 0.00 0.00 3.77
315 333 3.253432 GCAAAGTACTTCTCTTGGGGTTG 59.747 47.826 8.95 0.44 0.00 3.77
316 334 3.117663 TGCAAAGTACTTCTCTTGGGGTT 60.118 43.478 8.95 0.00 0.00 4.11
317 335 2.441750 TGCAAAGTACTTCTCTTGGGGT 59.558 45.455 8.95 0.00 0.00 4.95
318 336 2.814336 GTGCAAAGTACTTCTCTTGGGG 59.186 50.000 8.95 0.00 0.00 4.96
319 337 2.814336 GGTGCAAAGTACTTCTCTTGGG 59.186 50.000 8.95 0.00 0.00 4.12
320 338 2.814336 GGGTGCAAAGTACTTCTCTTGG 59.186 50.000 8.95 0.00 0.00 3.61
321 339 3.476552 TGGGTGCAAAGTACTTCTCTTG 58.523 45.455 8.95 4.60 0.00 3.02
322 340 3.857157 TGGGTGCAAAGTACTTCTCTT 57.143 42.857 8.95 0.00 0.00 2.85
344 362 1.450312 CTCTGTCCCCCGCAATCAC 60.450 63.158 0.00 0.00 0.00 3.06
346 364 0.250081 GATCTCTGTCCCCCGCAATC 60.250 60.000 0.00 0.00 0.00 2.67
347 365 0.982852 TGATCTCTGTCCCCCGCAAT 60.983 55.000 0.00 0.00 0.00 3.56
348 366 1.612146 TGATCTCTGTCCCCCGCAA 60.612 57.895 0.00 0.00 0.00 4.85
349 367 2.038813 TGATCTCTGTCCCCCGCA 59.961 61.111 0.00 0.00 0.00 5.69
350 368 2.801631 CCTGATCTCTGTCCCCCGC 61.802 68.421 0.00 0.00 0.00 6.13
351 369 1.381872 ACCTGATCTCTGTCCCCCG 60.382 63.158 0.00 0.00 0.00 5.73
352 370 0.325671 TCACCTGATCTCTGTCCCCC 60.326 60.000 0.00 0.00 0.00 5.40
353 371 0.827368 GTCACCTGATCTCTGTCCCC 59.173 60.000 0.00 0.00 0.00 4.81
354 372 1.561643 TGTCACCTGATCTCTGTCCC 58.438 55.000 0.00 0.00 0.00 4.46
355 373 2.741228 GCATGTCACCTGATCTCTGTCC 60.741 54.545 0.00 0.00 0.00 4.02
356 374 2.093816 TGCATGTCACCTGATCTCTGTC 60.094 50.000 0.00 0.00 0.00 3.51
357 375 1.904537 TGCATGTCACCTGATCTCTGT 59.095 47.619 0.00 0.00 0.00 3.41
358 376 2.277969 GTGCATGTCACCTGATCTCTG 58.722 52.381 8.54 0.00 39.79 3.35
359 377 2.687700 GTGCATGTCACCTGATCTCT 57.312 50.000 8.54 0.00 39.79 3.10
376 394 0.040157 CACGGTGACATGCAAAGGTG 60.040 55.000 0.74 0.00 0.00 4.00
377 395 0.465460 ACACGGTGACATGCAAAGGT 60.465 50.000 16.29 0.00 0.00 3.50
378 396 0.040157 CACACGGTGACATGCAAAGG 60.040 55.000 16.29 0.00 35.23 3.11
379 397 0.661187 GCACACGGTGACATGCAAAG 60.661 55.000 16.29 0.00 38.00 2.77
380 398 1.358402 GCACACGGTGACATGCAAA 59.642 52.632 16.29 0.00 38.00 3.68
381 399 2.551006 GGCACACGGTGACATGCAA 61.551 57.895 16.29 0.00 41.94 4.08
382 400 2.956799 AAGGCACACGGTGACATGCA 62.957 55.000 16.29 0.00 45.35 3.96
383 401 2.260869 AAGGCACACGGTGACATGC 61.261 57.895 16.29 13.96 45.35 4.06
384 402 1.575922 CAAGGCACACGGTGACATG 59.424 57.895 16.29 3.91 45.35 3.21
385 403 2.260869 GCAAGGCACACGGTGACAT 61.261 57.895 16.29 0.98 45.35 3.06
386 404 2.899838 GCAAGGCACACGGTGACA 60.900 61.111 16.29 0.00 45.35 3.58
387 405 4.012895 CGCAAGGCACACGGTGAC 62.013 66.667 16.29 6.26 42.83 3.67
399 417 2.660189 ATTTGAATTCAGGCCGCAAG 57.340 45.000 8.41 0.00 0.00 4.01
400 418 3.399440 AAATTTGAATTCAGGCCGCAA 57.601 38.095 8.41 0.00 0.00 4.85
401 419 4.527509 TTAAATTTGAATTCAGGCCGCA 57.472 36.364 8.41 0.00 0.00 5.69
402 420 4.688413 TGTTTAAATTTGAATTCAGGCCGC 59.312 37.500 8.41 0.00 0.00 6.53
403 421 6.966435 ATGTTTAAATTTGAATTCAGGCCG 57.034 33.333 8.41 0.00 0.00 6.13
404 422 8.379902 CGTAATGTTTAAATTTGAATTCAGGCC 58.620 33.333 8.41 0.00 0.00 5.19
405 423 9.134734 TCGTAATGTTTAAATTTGAATTCAGGC 57.865 29.630 8.41 0.00 0.00 4.85
443 461 6.224584 TGTGATGTGAACATGCATGATTTTT 58.775 32.000 32.75 16.45 36.57 1.94
444 462 5.785243 TGTGATGTGAACATGCATGATTTT 58.215 33.333 32.75 16.83 36.57 1.82
445 463 5.394224 TGTGATGTGAACATGCATGATTT 57.606 34.783 32.75 17.59 36.57 2.17
446 464 5.592104 ATGTGATGTGAACATGCATGATT 57.408 34.783 32.75 21.39 36.89 2.57
447 465 6.894339 ATATGTGATGTGAACATGCATGAT 57.106 33.333 32.75 22.02 38.67 2.45
448 466 6.702716 AATATGTGATGTGAACATGCATGA 57.297 33.333 32.75 10.72 38.67 3.07
449 467 8.293867 TCATAATATGTGATGTGAACATGCATG 58.706 33.333 25.09 25.09 38.67 4.06
450 468 8.398878 TCATAATATGTGATGTGAACATGCAT 57.601 30.769 0.00 7.74 38.67 3.96
451 469 7.804843 TCATAATATGTGATGTGAACATGCA 57.195 32.000 0.00 0.00 38.67 3.96
455 473 9.283768 GGGTTATCATAATATGTGATGTGAACA 57.716 33.333 12.01 0.00 36.96 3.18
456 474 8.730680 GGGGTTATCATAATATGTGATGTGAAC 58.269 37.037 12.01 9.14 36.96 3.18
457 475 8.668653 AGGGGTTATCATAATATGTGATGTGAA 58.331 33.333 12.01 0.00 36.96 3.18
458 476 8.218423 AGGGGTTATCATAATATGTGATGTGA 57.782 34.615 12.01 0.00 36.96 3.58
459 477 9.958180 TTAGGGGTTATCATAATATGTGATGTG 57.042 33.333 12.01 0.00 36.96 3.21
490 508 9.474920 GGTGTATGTTTCAAATTTTGATCTGAA 57.525 29.630 12.39 1.78 39.84 3.02
491 509 7.807433 CGGTGTATGTTTCAAATTTTGATCTGA 59.193 33.333 12.39 0.00 39.84 3.27
492 510 7.807433 TCGGTGTATGTTTCAAATTTTGATCTG 59.193 33.333 12.39 3.04 39.84 2.90
493 511 7.881142 TCGGTGTATGTTTCAAATTTTGATCT 58.119 30.769 12.39 1.71 39.84 2.75
494 512 8.020819 TCTCGGTGTATGTTTCAAATTTTGATC 58.979 33.333 12.39 9.48 39.84 2.92
495 513 7.881142 TCTCGGTGTATGTTTCAAATTTTGAT 58.119 30.769 12.39 0.96 39.84 2.57
496 514 7.265647 TCTCGGTGTATGTTTCAAATTTTGA 57.734 32.000 7.74 7.74 38.04 2.69
497 515 7.358352 GCTTCTCGGTGTATGTTTCAAATTTTG 60.358 37.037 2.59 2.59 0.00 2.44
498 516 6.640907 GCTTCTCGGTGTATGTTTCAAATTTT 59.359 34.615 0.00 0.00 0.00 1.82
499 517 6.149633 GCTTCTCGGTGTATGTTTCAAATTT 58.850 36.000 0.00 0.00 0.00 1.82
500 518 5.240623 TGCTTCTCGGTGTATGTTTCAAATT 59.759 36.000 0.00 0.00 0.00 1.82
501 519 4.759693 TGCTTCTCGGTGTATGTTTCAAAT 59.240 37.500 0.00 0.00 0.00 2.32
502 520 4.130857 TGCTTCTCGGTGTATGTTTCAAA 58.869 39.130 0.00 0.00 0.00 2.69
503 521 3.734463 TGCTTCTCGGTGTATGTTTCAA 58.266 40.909 0.00 0.00 0.00 2.69
504 522 3.394674 TGCTTCTCGGTGTATGTTTCA 57.605 42.857 0.00 0.00 0.00 2.69
505 523 4.742438 TTTGCTTCTCGGTGTATGTTTC 57.258 40.909 0.00 0.00 0.00 2.78
506 524 5.508200 TTTTTGCTTCTCGGTGTATGTTT 57.492 34.783 0.00 0.00 0.00 2.83
527 545 9.512588 ACAACTATTCATGACAGATTTCTCTTT 57.487 29.630 9.90 0.00 0.00 2.52
528 546 8.944029 CACAACTATTCATGACAGATTTCTCTT 58.056 33.333 9.90 0.00 0.00 2.85
529 547 8.316946 TCACAACTATTCATGACAGATTTCTCT 58.683 33.333 9.90 0.00 0.00 3.10
530 548 8.484641 TCACAACTATTCATGACAGATTTCTC 57.515 34.615 9.90 0.00 0.00 2.87
531 549 8.853077 TTCACAACTATTCATGACAGATTTCT 57.147 30.769 9.90 0.00 0.00 2.52
532 550 9.499585 CATTCACAACTATTCATGACAGATTTC 57.500 33.333 9.90 0.00 0.00 2.17
533 551 8.464404 CCATTCACAACTATTCATGACAGATTT 58.536 33.333 9.90 0.00 0.00 2.17
534 552 7.613022 ACCATTCACAACTATTCATGACAGATT 59.387 33.333 9.90 0.00 0.00 2.40
535 553 7.114754 ACCATTCACAACTATTCATGACAGAT 58.885 34.615 9.90 0.00 0.00 2.90
536 554 6.475504 ACCATTCACAACTATTCATGACAGA 58.524 36.000 9.90 0.00 0.00 3.41
537 555 6.748333 ACCATTCACAACTATTCATGACAG 57.252 37.500 0.00 0.00 0.00 3.51
538 556 6.942005 AGAACCATTCACAACTATTCATGACA 59.058 34.615 0.00 0.00 0.00 3.58
539 557 7.335422 AGAGAACCATTCACAACTATTCATGAC 59.665 37.037 0.00 0.00 0.00 3.06
540 558 7.335171 CAGAGAACCATTCACAACTATTCATGA 59.665 37.037 0.00 0.00 0.00 3.07
541 559 7.120285 ACAGAGAACCATTCACAACTATTCATG 59.880 37.037 0.00 0.00 0.00 3.07
542 560 7.170965 ACAGAGAACCATTCACAACTATTCAT 58.829 34.615 0.00 0.00 0.00 2.57
543 561 6.533730 ACAGAGAACCATTCACAACTATTCA 58.466 36.000 0.00 0.00 0.00 2.57
544 562 8.723942 ATACAGAGAACCATTCACAACTATTC 57.276 34.615 0.00 0.00 0.00 1.75
545 563 9.601217 GTATACAGAGAACCATTCACAACTATT 57.399 33.333 0.00 0.00 0.00 1.73
546 564 8.982723 AGTATACAGAGAACCATTCACAACTAT 58.017 33.333 5.50 0.00 0.00 2.12
547 565 8.362464 AGTATACAGAGAACCATTCACAACTA 57.638 34.615 5.50 0.00 0.00 2.24
548 566 7.246171 AGTATACAGAGAACCATTCACAACT 57.754 36.000 5.50 0.00 0.00 3.16
549 567 9.601217 AATAGTATACAGAGAACCATTCACAAC 57.399 33.333 5.50 0.00 0.00 3.32
550 568 9.817809 GAATAGTATACAGAGAACCATTCACAA 57.182 33.333 5.50 0.00 0.00 3.33
551 569 8.977412 TGAATAGTATACAGAGAACCATTCACA 58.023 33.333 5.50 0.00 0.00 3.58
552 570 9.250624 GTGAATAGTATACAGAGAACCATTCAC 57.749 37.037 5.50 9.18 41.12 3.18
553 571 8.977412 TGTGAATAGTATACAGAGAACCATTCA 58.023 33.333 5.50 4.46 0.00 2.57
554 572 9.988815 ATGTGAATAGTATACAGAGAACCATTC 57.011 33.333 5.50 2.26 0.00 2.67
555 573 9.988815 GATGTGAATAGTATACAGAGAACCATT 57.011 33.333 5.50 0.00 0.00 3.16
556 574 9.373450 AGATGTGAATAGTATACAGAGAACCAT 57.627 33.333 5.50 0.00 0.00 3.55
557 575 8.633561 CAGATGTGAATAGTATACAGAGAACCA 58.366 37.037 5.50 0.00 0.00 3.67
558 576 8.851145 TCAGATGTGAATAGTATACAGAGAACC 58.149 37.037 5.50 0.00 0.00 3.62
559 577 9.891828 CTCAGATGTGAATAGTATACAGAGAAC 57.108 37.037 5.50 0.00 30.14 3.01
560 578 9.634021 ACTCAGATGTGAATAGTATACAGAGAA 57.366 33.333 5.50 0.00 30.14 2.87
561 579 9.634021 AACTCAGATGTGAATAGTATACAGAGA 57.366 33.333 5.50 0.00 30.14 3.10
570 588 9.566432 AAAAAGAGAAACTCAGATGTGAATAGT 57.434 29.630 0.00 0.00 32.06 2.12
593 611 6.073494 TCGAAACATACATCGAGAAGCAAAAA 60.073 34.615 0.00 0.00 42.61 1.94
594 612 5.407084 TCGAAACATACATCGAGAAGCAAAA 59.593 36.000 0.00 0.00 42.61 2.44
595 613 4.926832 TCGAAACATACATCGAGAAGCAAA 59.073 37.500 0.00 0.00 42.61 3.68
596 614 4.490743 TCGAAACATACATCGAGAAGCAA 58.509 39.130 0.00 0.00 42.61 3.91
597 615 4.104696 TCGAAACATACATCGAGAAGCA 57.895 40.909 0.00 0.00 42.61 3.91
603 621 6.811665 AGATCAAAACTCGAAACATACATCGA 59.188 34.615 0.00 0.00 45.01 3.59
604 622 6.896613 CAGATCAAAACTCGAAACATACATCG 59.103 38.462 0.00 0.00 40.31 3.84
605 623 7.963981 TCAGATCAAAACTCGAAACATACATC 58.036 34.615 0.00 0.00 0.00 3.06
606 624 7.905604 TCAGATCAAAACTCGAAACATACAT 57.094 32.000 0.00 0.00 0.00 2.29
607 625 7.722795 TTCAGATCAAAACTCGAAACATACA 57.277 32.000 0.00 0.00 0.00 2.29
608 626 9.612620 AAATTCAGATCAAAACTCGAAACATAC 57.387 29.630 0.00 0.00 0.00 2.39
610 628 9.533253 AAAAATTCAGATCAAAACTCGAAACAT 57.467 25.926 0.00 0.00 0.00 2.71
611 629 8.925161 AAAAATTCAGATCAAAACTCGAAACA 57.075 26.923 0.00 0.00 0.00 2.83
636 654 9.914834 ACAGCACATATTTAGATAACCCTTAAA 57.085 29.630 0.00 0.00 0.00 1.52
637 655 9.337396 CACAGCACATATTTAGATAACCCTTAA 57.663 33.333 0.00 0.00 0.00 1.85
638 656 8.710239 TCACAGCACATATTTAGATAACCCTTA 58.290 33.333 0.00 0.00 0.00 2.69
639 657 7.573710 TCACAGCACATATTTAGATAACCCTT 58.426 34.615 0.00 0.00 0.00 3.95
640 658 7.136822 TCACAGCACATATTTAGATAACCCT 57.863 36.000 0.00 0.00 0.00 4.34
641 659 7.801716 TTCACAGCACATATTTAGATAACCC 57.198 36.000 0.00 0.00 0.00 4.11
645 663 9.723601 TGCATATTCACAGCACATATTTAGATA 57.276 29.630 0.00 0.00 32.55 1.98
646 664 8.625786 TGCATATTCACAGCACATATTTAGAT 57.374 30.769 0.00 0.00 32.55 1.98
647 665 8.508875 CATGCATATTCACAGCACATATTTAGA 58.491 33.333 0.00 0.00 41.60 2.10
648 666 8.294577 ACATGCATATTCACAGCACATATTTAG 58.705 33.333 0.00 0.00 41.60 1.85
649 667 8.168790 ACATGCATATTCACAGCACATATTTA 57.831 30.769 0.00 0.00 41.60 1.40
650 668 7.046292 ACATGCATATTCACAGCACATATTT 57.954 32.000 0.00 0.00 41.60 1.40
651 669 6.644248 ACATGCATATTCACAGCACATATT 57.356 33.333 0.00 0.00 41.60 1.28
652 670 6.644248 AACATGCATATTCACAGCACATAT 57.356 33.333 0.00 0.00 41.60 1.78
653 671 6.453926 AAACATGCATATTCACAGCACATA 57.546 33.333 0.00 0.00 41.60 2.29
654 672 4.994907 AACATGCATATTCACAGCACAT 57.005 36.364 0.00 0.00 41.60 3.21
655 673 4.787260 AAACATGCATATTCACAGCACA 57.213 36.364 0.00 0.00 41.60 4.57
688 706 9.362911 CGAATTCAAATTTAAACATTGCGAAAA 57.637 25.926 6.22 2.16 0.00 2.29
689 707 8.006590 CCGAATTCAAATTTAAACATTGCGAAA 58.993 29.630 6.22 0.00 0.00 3.46
690 708 7.359598 CCCGAATTCAAATTTAAACATTGCGAA 60.360 33.333 6.22 2.95 0.00 4.70
691 709 6.090088 CCCGAATTCAAATTTAAACATTGCGA 59.910 34.615 6.22 3.66 0.00 5.10
692 710 6.239945 CCCGAATTCAAATTTAAACATTGCG 58.760 36.000 6.22 7.85 0.00 4.85
693 711 6.020984 GCCCGAATTCAAATTTAAACATTGC 58.979 36.000 6.22 0.00 0.00 3.56
694 712 6.541969 GGCCCGAATTCAAATTTAAACATTG 58.458 36.000 6.22 8.56 0.00 2.82
695 713 5.350091 CGGCCCGAATTCAAATTTAAACATT 59.650 36.000 0.00 0.00 0.00 2.71
696 714 4.867608 CGGCCCGAATTCAAATTTAAACAT 59.132 37.500 0.00 0.00 0.00 2.71
697 715 4.238514 CGGCCCGAATTCAAATTTAAACA 58.761 39.130 0.00 0.00 0.00 2.83
698 716 3.061563 GCGGCCCGAATTCAAATTTAAAC 59.938 43.478 7.68 0.00 0.00 2.01
699 717 3.254892 GCGGCCCGAATTCAAATTTAAA 58.745 40.909 7.68 0.00 0.00 1.52
700 718 2.231478 TGCGGCCCGAATTCAAATTTAA 59.769 40.909 7.68 0.00 0.00 1.52
701 719 1.819288 TGCGGCCCGAATTCAAATTTA 59.181 42.857 7.68 0.00 0.00 1.40
702 720 0.605589 TGCGGCCCGAATTCAAATTT 59.394 45.000 7.68 0.00 0.00 1.82
703 721 0.605589 TTGCGGCCCGAATTCAAATT 59.394 45.000 7.68 0.00 0.00 1.82
704 722 0.173255 CTTGCGGCCCGAATTCAAAT 59.827 50.000 7.68 0.00 0.00 2.32
705 723 1.583986 CTTGCGGCCCGAATTCAAA 59.416 52.632 7.68 0.00 0.00 2.69
706 724 2.339556 CCTTGCGGCCCGAATTCAA 61.340 57.895 7.68 0.00 0.00 2.69
707 725 2.749839 CCTTGCGGCCCGAATTCA 60.750 61.111 7.68 0.00 0.00 2.57
718 736 4.012895 GTCACCGTGTGCCTTGCG 62.013 66.667 0.00 0.00 32.98 4.85
719 737 2.260869 ATGTCACCGTGTGCCTTGC 61.261 57.895 0.00 0.00 32.98 4.01
720 738 1.575922 CATGTCACCGTGTGCCTTG 59.424 57.895 0.00 0.00 32.98 3.61
721 739 2.260869 GCATGTCACCGTGTGCCTT 61.261 57.895 0.00 0.00 32.98 4.35
722 740 2.669569 GCATGTCACCGTGTGCCT 60.670 61.111 0.00 0.00 32.98 4.75
723 741 2.069465 TTTGCATGTCACCGTGTGCC 62.069 55.000 9.42 0.00 36.79 5.01
724 742 0.661187 CTTTGCATGTCACCGTGTGC 60.661 55.000 5.81 5.81 38.05 4.57
725 743 0.040157 CCTTTGCATGTCACCGTGTG 60.040 55.000 0.00 0.00 34.45 3.82
726 744 0.465460 ACCTTTGCATGTCACCGTGT 60.465 50.000 0.00 0.00 0.00 4.49
727 745 0.040157 CACCTTTGCATGTCACCGTG 60.040 55.000 0.00 0.00 0.00 4.94
728 746 2.330254 CACCTTTGCATGTCACCGT 58.670 52.632 0.00 0.00 0.00 4.83
744 762 2.277969 CAGAGATCAGGTGACATGCAC 58.722 52.381 10.63 10.63 46.98 4.57
745 763 1.904537 ACAGAGATCAGGTGACATGCA 59.095 47.619 0.00 0.00 0.00 3.96
746 764 2.548875 GACAGAGATCAGGTGACATGC 58.451 52.381 0.00 0.00 0.00 4.06
747 765 2.480932 CGGACAGAGATCAGGTGACATG 60.481 54.545 0.00 0.00 0.00 3.21
748 766 1.753649 CGGACAGAGATCAGGTGACAT 59.246 52.381 0.00 0.00 0.00 3.06
749 767 1.177401 CGGACAGAGATCAGGTGACA 58.823 55.000 0.00 0.00 0.00 3.58
750 768 1.464734 TCGGACAGAGATCAGGTGAC 58.535 55.000 0.00 0.00 0.00 3.67
751 769 2.428530 CAATCGGACAGAGATCAGGTGA 59.571 50.000 0.00 0.00 0.00 4.02
752 770 2.819115 CAATCGGACAGAGATCAGGTG 58.181 52.381 0.00 0.00 0.00 4.00
753 771 1.137872 GCAATCGGACAGAGATCAGGT 59.862 52.381 0.00 0.00 0.00 4.00
754 772 1.863267 GCAATCGGACAGAGATCAGG 58.137 55.000 0.00 0.00 0.00 3.86
755 773 1.485397 CGCAATCGGACAGAGATCAG 58.515 55.000 0.00 0.00 0.00 2.90
756 774 3.648528 CGCAATCGGACAGAGATCA 57.351 52.632 0.00 0.00 0.00 2.92
767 785 1.153449 TAACTGGCTCCCGCAATCG 60.153 57.895 0.00 0.00 38.10 3.34
782 800 7.763172 TTGGTTGTTTGAAACATCATGTAAC 57.237 32.000 11.97 5.02 41.79 2.50
832 850 3.611057 CGGAGGATTTTACGGATACCTCG 60.611 52.174 0.00 0.00 43.06 4.63
837 855 4.037208 GTCTCACGGAGGATTTTACGGATA 59.963 45.833 1.76 0.00 0.00 2.59
848 866 1.970114 GTCACGGTCTCACGGAGGA 60.970 63.158 1.76 0.00 38.39 3.71
878 896 2.030027 TCCAGTGAGTCTCCCACAAT 57.970 50.000 0.00 0.00 37.01 2.71
879 897 1.625315 CATCCAGTGAGTCTCCCACAA 59.375 52.381 0.00 0.00 37.01 3.33
880 898 1.269958 CATCCAGTGAGTCTCCCACA 58.730 55.000 0.00 0.00 37.01 4.17
881 899 0.107945 GCATCCAGTGAGTCTCCCAC 60.108 60.000 0.00 0.00 34.89 4.61
882 900 0.545071 TGCATCCAGTGAGTCTCCCA 60.545 55.000 0.00 0.00 0.00 4.37
917 935 4.007940 CAACCAACCGTCGCCGTG 62.008 66.667 0.00 0.00 0.00 4.94
977 995 0.861837 CACCGTCTCTTTGCTGTGAC 59.138 55.000 0.00 0.00 0.00 3.67
978 996 0.750249 TCACCGTCTCTTTGCTGTGA 59.250 50.000 0.00 0.00 0.00 3.58
979 997 1.143305 CTCACCGTCTCTTTGCTGTG 58.857 55.000 0.00 0.00 0.00 3.66
980 998 0.601311 GCTCACCGTCTCTTTGCTGT 60.601 55.000 0.00 0.00 0.00 4.40
981 999 0.601046 TGCTCACCGTCTCTTTGCTG 60.601 55.000 0.00 0.00 0.00 4.41
982 1000 0.322975 ATGCTCACCGTCTCTTTGCT 59.677 50.000 0.00 0.00 0.00 3.91
983 1001 0.445436 CATGCTCACCGTCTCTTTGC 59.555 55.000 0.00 0.00 0.00 3.68
1149 1167 2.294074 CTCTTAGTCGTGGGAGAGGAG 58.706 57.143 0.00 0.00 33.63 3.69
1150 1168 1.682394 GCTCTTAGTCGTGGGAGAGGA 60.682 57.143 0.00 0.00 36.88 3.71
1152 1170 1.757682 AGCTCTTAGTCGTGGGAGAG 58.242 55.000 0.00 0.00 38.87 3.20
1154 1172 3.003897 GTCATAGCTCTTAGTCGTGGGAG 59.996 52.174 0.00 0.00 0.00 4.30
1156 1174 2.034812 GGTCATAGCTCTTAGTCGTGGG 59.965 54.545 0.00 0.00 0.00 4.61
1173 1191 4.753662 CCCCCTCGGTCTCGGTCA 62.754 72.222 0.00 0.00 36.95 4.02
1225 1243 3.512516 GCATCCTGGTTCAGCGGC 61.513 66.667 0.00 0.00 0.00 6.53
1226 1244 3.197790 CGCATCCTGGTTCAGCGG 61.198 66.667 13.75 0.00 44.20 5.52
1263 1281 2.201732 GCCGTGTACACATGATCGATT 58.798 47.619 24.98 0.00 34.90 3.34
1269 1287 0.941936 CACACGCCGTGTACACATGA 60.942 55.000 23.93 0.00 45.65 3.07
1274 1292 1.009903 GTATGCACACGCCGTGTACA 61.010 55.000 23.95 23.95 45.65 2.90
1288 1306 2.555757 GGGAATGCAGATCTTGGTATGC 59.444 50.000 0.00 0.00 39.14 3.14
1323 1341 4.922206 TCATCAGGGAAAATAAGCTGTGT 58.078 39.130 0.00 0.00 0.00 3.72
1324 1342 5.393461 GGTTCATCAGGGAAAATAAGCTGTG 60.393 44.000 0.00 0.00 0.00 3.66
1344 1362 2.289945 ACAAGAGTGATCTGCAGGGTTC 60.290 50.000 15.13 9.39 0.00 3.62
1391 1409 2.144833 TTGATCACGTACGCGGTGGT 62.145 55.000 16.72 5.03 43.45 4.16
1416 1434 6.204108 CAGTACGTTGGAACTTGGATAAAAGT 59.796 38.462 0.00 0.00 42.21 2.66
1436 1454 3.377485 TGCTAGCTGTGTAGTAGCAGTAC 59.623 47.826 17.23 0.00 43.27 2.73
1441 1459 1.751924 AGGTGCTAGCTGTGTAGTAGC 59.248 52.381 17.23 2.25 41.43 3.58
1501 1522 4.348081 CGCAGCAACACATAAGCG 57.652 55.556 0.00 0.00 39.17 4.68
1604 1625 3.130160 CCTGAAGCGCTTCTGCCC 61.130 66.667 40.70 22.41 40.14 5.36
1626 1647 8.618240 TGTAAGAAGAGGAGGGATTGTTATTA 57.382 34.615 0.00 0.00 0.00 0.98
1634 1655 9.634021 GAATAAAAATGTAAGAAGAGGAGGGAT 57.366 33.333 0.00 0.00 0.00 3.85
1663 1684 4.684703 CGTCCGAAAATAAGTGTCTCAACT 59.315 41.667 0.00 0.00 0.00 3.16
1664 1685 4.143179 CCGTCCGAAAATAAGTGTCTCAAC 60.143 45.833 0.00 0.00 0.00 3.18
1667 1688 3.841643 TCCGTCCGAAAATAAGTGTCTC 58.158 45.455 0.00 0.00 0.00 3.36
1668 1689 3.257624 ACTCCGTCCGAAAATAAGTGTCT 59.742 43.478 0.00 0.00 0.00 3.41
1669 1690 3.367025 CACTCCGTCCGAAAATAAGTGTC 59.633 47.826 0.00 0.00 0.00 3.67
1672 1693 3.257624 ACTCACTCCGTCCGAAAATAAGT 59.742 43.478 0.00 0.00 0.00 2.24
1673 1694 3.846360 ACTCACTCCGTCCGAAAATAAG 58.154 45.455 0.00 0.00 0.00 1.73
1674 1695 3.947910 ACTCACTCCGTCCGAAAATAA 57.052 42.857 0.00 0.00 0.00 1.40
1675 1696 3.758023 TGTACTCACTCCGTCCGAAAATA 59.242 43.478 0.00 0.00 0.00 1.40
1677 1698 1.955778 TGTACTCACTCCGTCCGAAAA 59.044 47.619 0.00 0.00 0.00 2.29
1680 1701 1.471287 CATTGTACTCACTCCGTCCGA 59.529 52.381 0.00 0.00 0.00 4.55
1681 1702 1.201647 ACATTGTACTCACTCCGTCCG 59.798 52.381 0.00 0.00 0.00 4.79
1682 1703 2.993899 CAACATTGTACTCACTCCGTCC 59.006 50.000 0.00 0.00 0.00 4.79
1683 1704 2.412089 GCAACATTGTACTCACTCCGTC 59.588 50.000 0.00 0.00 0.00 4.79
1684 1705 2.037251 AGCAACATTGTACTCACTCCGT 59.963 45.455 0.00 0.00 0.00 4.69
1685 1706 2.688507 AGCAACATTGTACTCACTCCG 58.311 47.619 0.00 0.00 0.00 4.63
1686 1707 4.787598 CAAAGCAACATTGTACTCACTCC 58.212 43.478 0.00 0.00 0.00 3.85
1687 1708 4.222114 GCAAAGCAACATTGTACTCACTC 58.778 43.478 0.00 0.00 0.00 3.51
1688 1709 3.631686 TGCAAAGCAACATTGTACTCACT 59.368 39.130 0.00 0.00 34.76 3.41
1689 1710 3.963665 TGCAAAGCAACATTGTACTCAC 58.036 40.909 0.00 0.00 34.76 3.51
1690 1711 4.645762 TTGCAAAGCAACATTGTACTCA 57.354 36.364 0.00 0.00 43.99 3.41
1706 1736 1.317613 ACACCTCGCTTGAATTGCAA 58.682 45.000 0.00 0.00 34.73 4.08
1718 1748 5.974158 CAGTATGAACTCTATGAACACCTCG 59.026 44.000 0.00 0.00 39.69 4.63
1731 1761 3.247648 ACGCACAAACACAGTATGAACTC 59.752 43.478 0.00 0.00 39.69 3.01
1745 1775 1.528076 ATGGGACTGCACGCACAAA 60.528 52.632 0.00 0.00 35.70 2.83
1904 1942 8.779354 TTCTATGTTCTAGGAGAAGAAAAAGC 57.221 34.615 0.00 0.00 37.24 3.51
1986 2024 4.222145 ACTTGTAGAGCGAATGGGTTCTAA 59.778 41.667 0.00 0.00 32.58 2.10
2006 2044 4.688879 TGTGACGATGATTAAAAGCGACTT 59.311 37.500 6.23 0.00 0.00 3.01
2099 2137 6.573434 AGACATTCTTGTTCCTTTTTGAACC 58.427 36.000 1.84 0.00 43.17 3.62
2134 2173 7.927629 GTCTTATATTTTGGTACGGATGTGGTA 59.072 37.037 0.00 0.00 0.00 3.25
2140 2179 8.496707 AAAACGTCTTATATTTTGGTACGGAT 57.503 30.769 0.00 0.00 33.44 4.18
2145 2184 8.229137 CCGACAAAAACGTCTTATATTTTGGTA 58.771 33.333 19.47 0.00 43.54 3.25
2146 2185 7.079475 CCGACAAAAACGTCTTATATTTTGGT 58.921 34.615 19.47 6.19 43.54 3.67
2150 2189 6.490566 AGCCGACAAAAACGTCTTATATTT 57.509 33.333 0.00 0.00 33.54 1.40
2152 2191 7.332678 AGTTTAGCCGACAAAAACGTCTTATAT 59.667 33.333 0.00 0.00 37.99 0.86
2155 2194 4.810491 AGTTTAGCCGACAAAAACGTCTTA 59.190 37.500 0.00 0.00 37.99 2.10
2157 2196 3.200483 AGTTTAGCCGACAAAAACGTCT 58.800 40.909 0.00 0.00 37.99 4.18
2159 2198 3.059393 GCTAGTTTAGCCGACAAAAACGT 60.059 43.478 0.00 0.00 45.95 3.99
2160 2199 3.476181 GCTAGTTTAGCCGACAAAAACG 58.524 45.455 0.00 0.00 45.95 3.60
2191 2230 8.604035 TCGCACTTCTTATCAAAATGTAAGATC 58.396 33.333 0.00 0.00 36.95 2.75
2192 2231 8.492673 TCGCACTTCTTATCAAAATGTAAGAT 57.507 30.769 0.00 0.00 36.95 2.40
2193 2232 7.899178 TCGCACTTCTTATCAAAATGTAAGA 57.101 32.000 0.00 0.00 35.69 2.10
2194 2233 9.214953 GAATCGCACTTCTTATCAAAATGTAAG 57.785 33.333 0.00 0.00 0.00 2.34
2198 2237 6.554419 TGGAATCGCACTTCTTATCAAAATG 58.446 36.000 0.00 0.00 0.00 2.32
2202 2241 4.832248 ACTGGAATCGCACTTCTTATCAA 58.168 39.130 0.00 0.00 0.00 2.57
2203 2242 4.471904 ACTGGAATCGCACTTCTTATCA 57.528 40.909 0.00 0.00 0.00 2.15
2204 2243 5.351465 TCAAACTGGAATCGCACTTCTTATC 59.649 40.000 0.00 0.00 0.00 1.75
2205 2244 5.245531 TCAAACTGGAATCGCACTTCTTAT 58.754 37.500 0.00 0.00 0.00 1.73
2206 2245 4.637276 TCAAACTGGAATCGCACTTCTTA 58.363 39.130 0.00 0.00 0.00 2.10
2207 2246 3.476552 TCAAACTGGAATCGCACTTCTT 58.523 40.909 0.00 0.00 0.00 2.52
2208 2247 3.126001 TCAAACTGGAATCGCACTTCT 57.874 42.857 0.00 0.00 0.00 2.85
2209 2248 3.896648 TTCAAACTGGAATCGCACTTC 57.103 42.857 0.00 0.00 0.00 3.01
2213 2264 7.714813 TCATAAGATATTCAAACTGGAATCGCA 59.285 33.333 0.00 0.00 38.41 5.10
2215 2266 8.226448 GCTCATAAGATATTCAAACTGGAATCG 58.774 37.037 0.00 0.00 38.41 3.34
2217 2268 7.716998 ACGCTCATAAGATATTCAAACTGGAAT 59.283 33.333 0.00 0.00 40.45 3.01
2237 2288 2.238942 TTGCTCTTCTTTCACGCTCA 57.761 45.000 0.00 0.00 0.00 4.26
2238 2289 3.241804 CGTATTGCTCTTCTTTCACGCTC 60.242 47.826 0.00 0.00 0.00 5.03
2369 2429 9.976511 TCAGAGAGAACGAAATAGAACTAAAAA 57.023 29.630 0.00 0.00 0.00 1.94
2370 2430 9.627395 CTCAGAGAGAACGAAATAGAACTAAAA 57.373 33.333 0.00 0.00 0.00 1.52
2371 2431 9.011095 TCTCAGAGAGAACGAAATAGAACTAAA 57.989 33.333 0.00 0.00 35.59 1.85
2439 2499 1.021390 AGATCGTCGGCAAGGCAAAG 61.021 55.000 0.00 0.00 0.00 2.77
2440 2500 0.605319 AAGATCGTCGGCAAGGCAAA 60.605 50.000 0.00 0.00 0.00 3.68
2441 2501 0.605319 AAAGATCGTCGGCAAGGCAA 60.605 50.000 0.00 0.00 0.00 4.52
2442 2502 1.003839 AAAGATCGTCGGCAAGGCA 60.004 52.632 0.00 0.00 0.00 4.75
2443 2503 1.716172 GAAAGATCGTCGGCAAGGC 59.284 57.895 0.00 0.00 0.00 4.35
2444 2504 1.999051 CGAAAGATCGTCGGCAAGG 59.001 57.895 12.46 0.00 44.06 3.61
2482 2542 7.662669 AGTGCCTTTCAAAATTTTATGATGCTT 59.337 29.630 2.44 0.00 0.00 3.91
2515 2580 8.091449 CCTATATTATCTGGACCACTGTCTTTC 58.909 40.741 0.00 0.00 41.47 2.62
2516 2581 7.016661 CCCTATATTATCTGGACCACTGTCTTT 59.983 40.741 0.00 0.00 41.47 2.52
2569 2634 2.270923 TCAAAGCCTGAATCGACGATG 58.729 47.619 11.83 0.00 0.00 3.84
2609 2674 1.808945 CTACTTTTGACAGCCTGCAGG 59.191 52.381 29.34 29.34 38.53 4.85
2617 2682 5.105146 ACTCTCCCATAGCTACTTTTGACAG 60.105 44.000 0.00 0.00 0.00 3.51
2630 2695 0.529337 CGCACTGCACTCTCCCATAG 60.529 60.000 1.11 0.00 0.00 2.23
2658 2723 4.992740 ACGGCCCCTGCATGCAAA 62.993 61.111 22.88 0.00 40.13 3.68
2670 2735 2.901292 GCTATGATGCTGCACGGCC 61.901 63.158 3.57 0.00 0.00 6.13
2671 2736 2.635899 GCTATGATGCTGCACGGC 59.364 61.111 3.57 1.38 0.00 5.68
2672 2737 1.504647 CTGGCTATGATGCTGCACGG 61.505 60.000 3.57 0.00 0.00 4.94
2673 2738 1.939597 CTGGCTATGATGCTGCACG 59.060 57.895 3.57 0.00 0.00 5.34
2674 2739 0.818445 AGCTGGCTATGATGCTGCAC 60.818 55.000 3.57 0.00 35.90 4.57
2707 2772 4.057428 AGGAGCAGTGCGACGGTC 62.057 66.667 10.00 0.63 0.00 4.79
2712 2777 0.671472 CATTGACAGGAGCAGTGCGA 60.671 55.000 10.00 0.00 0.00 5.10
2794 2907 3.386768 TCAGCTTCTGCGTAAGAAACT 57.613 42.857 2.24 3.00 44.38 2.66
2800 2913 3.059884 CTCAGTTTCAGCTTCTGCGTAA 58.940 45.455 0.00 0.00 45.42 3.18
2803 2916 1.458827 GTCTCAGTTTCAGCTTCTGCG 59.541 52.381 0.00 0.00 45.42 5.18
2804 2917 1.458827 CGTCTCAGTTTCAGCTTCTGC 59.541 52.381 0.00 0.00 40.05 4.26
2814 2927 2.546778 TCGCTGAAAACGTCTCAGTTT 58.453 42.857 21.96 5.80 45.21 2.66
2833 2946 3.832276 TGCGTTGGCATATCTTGTTTTC 58.168 40.909 0.00 0.00 46.21 2.29
2976 3107 2.357075 TCGGCGAGGATAGCTATAGTG 58.643 52.381 4.99 0.00 36.74 2.74
2980 3111 1.813786 GTCTTCGGCGAGGATAGCTAT 59.186 52.381 24.55 5.76 36.74 2.97
3000 3131 1.164041 ACCAAACGGCTCCTGTTTCG 61.164 55.000 0.00 0.00 37.44 3.46
3072 3203 2.435069 CACTGAGATGAGGAAGGCTGAT 59.565 50.000 0.00 0.00 0.00 2.90
3073 3204 1.829849 CACTGAGATGAGGAAGGCTGA 59.170 52.381 0.00 0.00 0.00 4.26
3095 3226 0.807667 GCGGTGCCTACTGTGATGAG 60.808 60.000 0.00 0.00 35.54 2.90
3108 3239 1.727467 GGGATTGTACATGCGGTGC 59.273 57.895 0.00 0.00 0.00 5.01
3130 3261 5.126779 TGCAACCAGATACTTTGTGTTGTA 58.873 37.500 0.00 0.00 36.39 2.41
3220 3351 7.538575 ACCTTCACAAATAATGCTGTTCATAC 58.461 34.615 0.00 0.00 34.33 2.39
3301 3432 1.544825 TTCTCTGGGACTTGGCTCCG 61.545 60.000 0.00 0.00 0.00 4.63
3388 3519 7.760340 AGAATTAGTACTTCGTCATGAGGAAAC 59.240 37.037 26.03 22.12 35.18 2.78
3400 3531 5.518847 TCATTTGCCGAGAATTAGTACTTCG 59.481 40.000 0.00 3.57 0.00 3.79
3532 3714 2.069273 GAGATGCACATACGCCCATAC 58.931 52.381 0.00 0.00 0.00 2.39
3750 3932 1.066605 CTGCAGCAATGGCCTGATTAC 59.933 52.381 3.32 0.00 42.56 1.89
3782 3964 7.986085 ACTTGCTTGTCAATATATCCATACC 57.014 36.000 0.00 0.00 33.57 2.73
4049 4232 0.902984 TACTCCATGACCACCTGCGT 60.903 55.000 0.00 0.00 0.00 5.24
4110 4293 2.492025 AGGAGGATGCCCAAGATTACA 58.508 47.619 0.00 0.00 33.88 2.41
4248 4431 5.879223 AGGCATGTGACTGAAATCTTCTAAG 59.121 40.000 0.00 0.00 27.68 2.18
4381 4565 4.251268 GTTGGTGCCTTCGATAGTAAAGT 58.749 43.478 0.00 0.00 37.40 2.66
4589 4773 2.552599 TCCAATGTTGCTCGGTAACA 57.447 45.000 9.24 9.24 41.72 2.41
4776 4960 6.876257 GTGATAGTCAGTCCAATTCTTCTGTT 59.124 38.462 0.00 0.00 0.00 3.16
4815 5006 7.189693 TGTCTACAAGAACATGTTCATTGAC 57.810 36.000 33.40 29.86 41.84 3.18
4898 5089 8.281531 TCATACCATGTTGAAAATTAGGGAGAT 58.718 33.333 0.00 0.00 0.00 2.75
4900 5091 7.880160 TCATACCATGTTGAAAATTAGGGAG 57.120 36.000 0.00 0.00 0.00 4.30
4983 5174 3.069872 ACTGCTGGAAAAACATTGCATCA 59.930 39.130 0.00 0.00 0.00 3.07
5111 5302 3.499048 ACTGTTACGTCGTCTAATGCTG 58.501 45.455 0.00 0.00 0.00 4.41
5276 5467 6.584563 CAGGTTTCTTTTGTCGTTTGAGAAAA 59.415 34.615 0.00 1.25 42.90 2.29
5342 5533 6.035368 TGCTTGCATTAAAGGCTGAAATAA 57.965 33.333 0.00 0.00 0.00 1.40
5350 5541 3.515330 ACAGATGCTTGCATTAAAGGC 57.485 42.857 9.59 0.00 0.00 4.35
5498 5689 7.683437 ACCACTTTAAAAGGTACTATTCTGC 57.317 36.000 9.60 0.00 38.49 4.26
5764 5995 1.068055 GTGAAACCAAGGCATCAGCTG 60.068 52.381 7.63 7.63 41.70 4.24
5924 6155 8.453320 ACAAAGTTAAATGTAGTATTTACCCGC 58.547 33.333 0.00 0.00 0.00 6.13
6031 6262 9.178758 GAGACCTTAAAATGAACAAGATGGTAT 57.821 33.333 0.00 0.00 0.00 2.73
6105 6336 9.569122 GGTTAGAATCCTAAACTATGCCATTTA 57.431 33.333 0.00 0.00 39.05 1.40
6190 6421 7.801716 TTGATCCCTTTAATCTGAATTACGG 57.198 36.000 0.00 0.00 0.00 4.02
6365 6596 8.658499 ACAGTTTCCATTTACCTATATCGTTC 57.342 34.615 0.00 0.00 0.00 3.95
6453 6684 3.388024 TGCAAACTTCTCTCCTGTACTGT 59.612 43.478 0.00 0.00 0.00 3.55
6494 6725 3.544684 TCAGCTTTGACGGCATAATCAT 58.455 40.909 0.00 0.00 0.00 2.45
6600 6831 2.908688 TGTCCTGTATGCATGCGTAT 57.091 45.000 21.99 9.26 0.00 3.06
6608 6839 7.775397 AATTTTGCAAATATGTCCTGTATGC 57.225 32.000 13.65 0.00 0.00 3.14
6717 6948 4.695396 TGTAGGTCGTTTTAACAGCAAGA 58.305 39.130 0.00 0.00 0.00 3.02
6752 6983 0.040514 TCGGAAGCATTTTGTGTGCG 60.041 50.000 0.00 0.00 46.86 5.34
6805 7036 6.316140 CACAGTAATATGCTACTTTGCAGGAA 59.684 38.462 0.00 0.00 46.71 3.36
6853 7085 5.070180 TCATCTGCCATTTCCTTTTTGTTCA 59.930 36.000 0.00 0.00 0.00 3.18
6854 7086 5.540911 TCATCTGCCATTTCCTTTTTGTTC 58.459 37.500 0.00 0.00 0.00 3.18
7066 7298 1.838112 ACCAGGTGGCATACATTGTG 58.162 50.000 0.00 0.00 39.32 3.33
7233 7465 1.366319 AGATGTCAAGGCCCTCACTT 58.634 50.000 0.00 0.00 0.00 3.16
7256 7488 2.342648 GAACGAACTCGCTGGGGT 59.657 61.111 0.00 0.00 44.43 4.95
7275 7507 7.148255 TGTCAATCTTATTACAGGTGCAATCAC 60.148 37.037 0.00 0.00 42.40 3.06
7498 7730 4.398044 ACGCACTATCCAAAATAAACCTGG 59.602 41.667 0.00 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.