Multiple sequence alignment - TraesCS6A01G216500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G216500 chr6A 100.000 2573 0 0 1 2573 398541563 398538991 0.000000e+00 4752
1 TraesCS6A01G216500 chr6A 88.204 373 37 4 1 371 493693264 493692897 3.040000e-119 438
2 TraesCS6A01G216500 chr6B 94.995 999 33 9 686 1679 438959552 438960538 0.000000e+00 1552
3 TraesCS6A01G216500 chr6D 91.585 1117 47 17 580 1679 277060738 277061824 0.000000e+00 1498
4 TraesCS6A01G216500 chr4B 92.617 894 57 9 1683 2572 636038478 636037590 0.000000e+00 1277
5 TraesCS6A01G216500 chr4B 91.173 895 70 8 1683 2572 110227491 110228381 0.000000e+00 1206
6 TraesCS6A01G216500 chr2B 91.937 893 64 8 1683 2572 174795356 174796243 0.000000e+00 1243
7 TraesCS6A01G216500 chr2B 87.838 370 35 6 2 371 76491729 76491370 2.370000e-115 425
8 TraesCS6A01G216500 chr1B 91.377 893 70 7 1683 2572 40432220 40431332 0.000000e+00 1216
9 TraesCS6A01G216500 chr1B 90.247 892 54 19 1683 2572 434411639 434412499 0.000000e+00 1134
10 TraesCS6A01G216500 chr1B 91.566 83 5 1 2019 2099 31150619 31150701 2.090000e-21 113
11 TraesCS6A01G216500 chr1B 91.566 83 5 1 2019 2099 560224074 560224156 2.090000e-21 113
12 TraesCS6A01G216500 chr7B 90.476 903 68 15 1682 2573 462493288 462492393 0.000000e+00 1175
13 TraesCS6A01G216500 chr7B 86.523 371 48 2 2 371 64422944 64423313 8.570000e-110 407
14 TraesCS6A01G216500 chr7B 85.946 370 46 4 2 371 690299319 690298956 8.630000e-105 390
15 TraesCS6A01G216500 chr3B 89.645 338 35 0 2 339 763488572 763488235 5.090000e-117 431
16 TraesCS6A01G216500 chr3B 86.992 369 40 5 2 370 3649336 3649696 2.380000e-110 409
17 TraesCS6A01G216500 chr3B 86.992 369 40 6 2 370 5187031 5186671 2.380000e-110 409
18 TraesCS6A01G216500 chr3B 84.806 283 40 3 1683 1964 743715729 743716009 5.420000e-72 281
19 TraesCS6A01G216500 chr5B 87.534 369 41 2 3 371 541942516 541942153 3.060000e-114 422
20 TraesCS6A01G216500 chr4A 86.792 371 44 2 1 371 742818827 742818462 2.380000e-110 409
21 TraesCS6A01G216500 chr3D 82.986 288 47 2 1683 1970 536239454 536239169 2.540000e-65 259
22 TraesCS6A01G216500 chr7D 79.830 352 58 11 1683 2027 64016406 64016751 7.110000e-61 244
23 TraesCS6A01G216500 chr5D 93.023 86 4 1 2019 2102 485356704 485356619 9.670000e-25 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G216500 chr6A 398538991 398541563 2572 True 4752 4752 100.000 1 2573 1 chr6A.!!$R1 2572
1 TraesCS6A01G216500 chr6B 438959552 438960538 986 False 1552 1552 94.995 686 1679 1 chr6B.!!$F1 993
2 TraesCS6A01G216500 chr6D 277060738 277061824 1086 False 1498 1498 91.585 580 1679 1 chr6D.!!$F1 1099
3 TraesCS6A01G216500 chr4B 636037590 636038478 888 True 1277 1277 92.617 1683 2572 1 chr4B.!!$R1 889
4 TraesCS6A01G216500 chr4B 110227491 110228381 890 False 1206 1206 91.173 1683 2572 1 chr4B.!!$F1 889
5 TraesCS6A01G216500 chr2B 174795356 174796243 887 False 1243 1243 91.937 1683 2572 1 chr2B.!!$F1 889
6 TraesCS6A01G216500 chr1B 40431332 40432220 888 True 1216 1216 91.377 1683 2572 1 chr1B.!!$R1 889
7 TraesCS6A01G216500 chr1B 434411639 434412499 860 False 1134 1134 90.247 1683 2572 1 chr1B.!!$F2 889
8 TraesCS6A01G216500 chr7B 462492393 462493288 895 True 1175 1175 90.476 1682 2573 1 chr7B.!!$R1 891

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
329 330 0.036105 TGCATGCATCTTCCAGACGT 60.036 50.0 18.46 0.0 0.0 4.34 F
337 338 0.039180 TCTTCCAGACGTAGAGGCCA 59.961 55.0 5.01 0.0 0.0 5.36 F
357 358 0.044855 AGGCCAGGGTACATTCTCCT 59.955 55.0 5.01 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1165 1192 0.105224 TGGTCGAGTCGGAAAGCAAA 59.895 50.0 13.54 0.0 0.0 3.68 R
1166 1193 0.320374 ATGGTCGAGTCGGAAAGCAA 59.680 50.0 13.54 0.0 0.0 3.91 R
2064 2097 1.402787 CAACTCCACCACCAAGCTTT 58.597 50.0 0.00 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.612517 TGATGCGTCAGTTTCTGCT 57.387 47.368 3.97 0.00 0.00 4.24
19 20 1.432514 TGATGCGTCAGTTTCTGCTC 58.567 50.000 3.97 0.00 0.00 4.26
20 21 1.001293 TGATGCGTCAGTTTCTGCTCT 59.999 47.619 3.97 0.00 0.00 4.09
21 22 1.392853 GATGCGTCAGTTTCTGCTCTG 59.607 52.381 0.00 0.00 0.00 3.35
22 23 0.389025 TGCGTCAGTTTCTGCTCTGA 59.611 50.000 0.00 0.00 38.20 3.27
23 24 1.202521 TGCGTCAGTTTCTGCTCTGAA 60.203 47.619 0.00 0.00 41.41 3.02
24 25 1.458827 GCGTCAGTTTCTGCTCTGAAG 59.541 52.381 0.00 0.00 41.41 3.02
25 26 2.864097 GCGTCAGTTTCTGCTCTGAAGA 60.864 50.000 10.98 0.00 41.41 2.87
26 27 3.583806 CGTCAGTTTCTGCTCTGAAGAT 58.416 45.455 0.00 0.00 41.41 2.40
27 28 4.738124 CGTCAGTTTCTGCTCTGAAGATA 58.262 43.478 0.00 0.00 41.41 1.98
28 29 4.797868 CGTCAGTTTCTGCTCTGAAGATAG 59.202 45.833 0.00 0.00 41.41 2.08
29 30 5.392487 CGTCAGTTTCTGCTCTGAAGATAGA 60.392 44.000 0.00 0.00 41.41 1.98
30 31 6.572519 GTCAGTTTCTGCTCTGAAGATAGAT 58.427 40.000 0.00 0.00 41.41 1.98
31 32 6.697019 GTCAGTTTCTGCTCTGAAGATAGATC 59.303 42.308 0.00 0.00 41.41 2.75
32 33 5.686841 CAGTTTCTGCTCTGAAGATAGATCG 59.313 44.000 0.00 0.00 34.02 3.69
33 34 5.592282 AGTTTCTGCTCTGAAGATAGATCGA 59.408 40.000 0.00 0.00 0.00 3.59
34 35 6.265196 AGTTTCTGCTCTGAAGATAGATCGAT 59.735 38.462 0.00 0.00 0.00 3.59
35 36 5.625921 TCTGCTCTGAAGATAGATCGATG 57.374 43.478 0.54 0.00 0.00 3.84
36 37 4.458642 TCTGCTCTGAAGATAGATCGATGG 59.541 45.833 0.54 0.00 0.00 3.51
37 38 4.401925 TGCTCTGAAGATAGATCGATGGA 58.598 43.478 0.54 0.00 0.00 3.41
38 39 4.829492 TGCTCTGAAGATAGATCGATGGAA 59.171 41.667 0.54 0.00 0.00 3.53
39 40 5.048154 TGCTCTGAAGATAGATCGATGGAAG 60.048 44.000 0.54 0.00 0.00 3.46
40 41 5.182950 GCTCTGAAGATAGATCGATGGAAGA 59.817 44.000 0.54 0.00 0.00 2.87
41 42 6.567687 TCTGAAGATAGATCGATGGAAGAC 57.432 41.667 0.54 0.00 0.00 3.01
42 43 5.180304 TCTGAAGATAGATCGATGGAAGACG 59.820 44.000 0.54 0.00 0.00 4.18
43 44 4.216472 TGAAGATAGATCGATGGAAGACGG 59.784 45.833 0.54 0.00 0.00 4.79
44 45 3.757270 AGATAGATCGATGGAAGACGGT 58.243 45.455 0.54 0.00 0.00 4.83
45 46 3.504134 AGATAGATCGATGGAAGACGGTG 59.496 47.826 0.54 0.00 0.00 4.94
46 47 0.747255 AGATCGATGGAAGACGGTGG 59.253 55.000 0.54 0.00 0.00 4.61
47 48 0.460311 GATCGATGGAAGACGGTGGT 59.540 55.000 0.54 0.00 0.00 4.16
48 49 0.175760 ATCGATGGAAGACGGTGGTG 59.824 55.000 0.00 0.00 0.00 4.17
49 50 0.896479 TCGATGGAAGACGGTGGTGA 60.896 55.000 0.00 0.00 0.00 4.02
50 51 0.736325 CGATGGAAGACGGTGGTGAC 60.736 60.000 0.00 0.00 0.00 3.67
51 52 0.736325 GATGGAAGACGGTGGTGACG 60.736 60.000 0.00 0.00 37.36 4.35
52 53 1.183030 ATGGAAGACGGTGGTGACGA 61.183 55.000 0.00 0.00 34.93 4.20
53 54 1.080705 GGAAGACGGTGGTGACGAG 60.081 63.158 0.00 0.00 34.93 4.18
54 55 1.733399 GAAGACGGTGGTGACGAGC 60.733 63.158 0.00 0.00 34.93 5.03
55 56 3.222354 AAGACGGTGGTGACGAGCC 62.222 63.158 0.00 0.00 34.93 4.70
56 57 3.681835 GACGGTGGTGACGAGCCT 61.682 66.667 0.00 0.00 34.93 4.58
57 58 3.222354 GACGGTGGTGACGAGCCTT 62.222 63.158 0.00 0.00 34.93 4.35
58 59 2.738521 CGGTGGTGACGAGCCTTG 60.739 66.667 0.00 0.00 0.00 3.61
59 60 3.050275 GGTGGTGACGAGCCTTGC 61.050 66.667 0.00 0.00 0.00 4.01
60 61 2.280797 GTGGTGACGAGCCTTGCA 60.281 61.111 0.00 0.00 0.00 4.08
61 62 1.891919 GTGGTGACGAGCCTTGCAA 60.892 57.895 0.00 0.00 0.00 4.08
62 63 1.073025 TGGTGACGAGCCTTGCAAT 59.927 52.632 0.00 0.00 0.00 3.56
63 64 1.236616 TGGTGACGAGCCTTGCAATG 61.237 55.000 0.00 0.00 0.00 2.82
64 65 1.237285 GGTGACGAGCCTTGCAATGT 61.237 55.000 0.00 0.00 0.00 2.71
65 66 0.110056 GTGACGAGCCTTGCAATGTG 60.110 55.000 0.00 0.00 0.00 3.21
66 67 1.154150 GACGAGCCTTGCAATGTGC 60.154 57.895 0.00 3.43 45.29 4.57
75 76 2.259204 GCAATGTGCGCATGTGGT 59.741 55.556 15.91 0.00 35.15 4.16
76 77 2.089936 GCAATGTGCGCATGTGGTG 61.090 57.895 15.91 9.37 35.15 4.17
89 90 2.510411 TGGTGCCCACTGTGAGTG 59.490 61.111 9.86 0.00 45.53 3.51
90 91 2.374525 TGGTGCCCACTGTGAGTGT 61.375 57.895 9.86 0.00 44.50 3.55
91 92 1.893808 GGTGCCCACTGTGAGTGTG 60.894 63.158 9.86 0.00 44.50 3.82
93 94 2.111878 GCCCACTGTGAGTGTGCT 59.888 61.111 9.86 0.00 44.48 4.40
94 95 1.371183 GCCCACTGTGAGTGTGCTA 59.629 57.895 9.86 0.00 44.48 3.49
95 96 0.671781 GCCCACTGTGAGTGTGCTAG 60.672 60.000 9.86 0.00 44.48 3.42
96 97 0.969149 CCCACTGTGAGTGTGCTAGA 59.031 55.000 9.86 0.00 44.50 2.43
97 98 1.337260 CCCACTGTGAGTGTGCTAGAC 60.337 57.143 9.86 0.00 44.50 2.59
98 99 1.337260 CCACTGTGAGTGTGCTAGACC 60.337 57.143 9.86 0.00 44.50 3.85
99 100 0.598562 ACTGTGAGTGTGCTAGACCG 59.401 55.000 0.00 0.00 0.00 4.79
100 101 0.109086 CTGTGAGTGTGCTAGACCGG 60.109 60.000 0.00 0.00 0.00 5.28
101 102 0.826256 TGTGAGTGTGCTAGACCGGT 60.826 55.000 6.92 6.92 0.00 5.28
102 103 0.388649 GTGAGTGTGCTAGACCGGTG 60.389 60.000 14.63 0.00 0.00 4.94
103 104 0.826256 TGAGTGTGCTAGACCGGTGT 60.826 55.000 14.63 12.06 0.00 4.16
104 105 0.388649 GAGTGTGCTAGACCGGTGTG 60.389 60.000 14.63 4.06 0.00 3.82
105 106 1.113517 AGTGTGCTAGACCGGTGTGT 61.114 55.000 14.63 0.00 0.00 3.72
106 107 0.944311 GTGTGCTAGACCGGTGTGTG 60.944 60.000 14.63 7.06 0.00 3.82
107 108 1.110518 TGTGCTAGACCGGTGTGTGA 61.111 55.000 14.63 0.00 0.00 3.58
108 109 0.666577 GTGCTAGACCGGTGTGTGAC 60.667 60.000 14.63 2.01 0.00 3.67
109 110 1.080025 GCTAGACCGGTGTGTGACC 60.080 63.158 14.63 0.00 42.07 4.02
110 111 1.590147 CTAGACCGGTGTGTGACCC 59.410 63.158 14.63 0.00 42.62 4.46
111 112 1.152504 TAGACCGGTGTGTGACCCA 60.153 57.895 14.63 0.00 42.62 4.51
112 113 1.183030 TAGACCGGTGTGTGACCCAG 61.183 60.000 14.63 0.00 42.62 4.45
113 114 2.766651 ACCGGTGTGTGACCCAGT 60.767 61.111 6.12 0.00 42.62 4.00
114 115 2.030562 CCGGTGTGTGACCCAGTC 59.969 66.667 0.00 0.00 42.62 3.51
115 116 2.030562 CGGTGTGTGACCCAGTCC 59.969 66.667 0.00 0.00 42.62 3.85
116 117 2.030562 GGTGTGTGACCCAGTCCG 59.969 66.667 0.00 0.00 39.10 4.79
117 118 2.030562 GTGTGTGACCCAGTCCGG 59.969 66.667 0.00 0.00 0.00 5.14
126 127 4.218722 CCAGTCCGGGTATGTTGC 57.781 61.111 0.00 0.00 0.00 4.17
127 128 1.602237 CCAGTCCGGGTATGTTGCT 59.398 57.895 0.00 0.00 0.00 3.91
128 129 0.828022 CCAGTCCGGGTATGTTGCTA 59.172 55.000 0.00 0.00 0.00 3.49
129 130 1.202533 CCAGTCCGGGTATGTTGCTAG 60.203 57.143 0.00 0.00 0.00 3.42
130 131 1.120530 AGTCCGGGTATGTTGCTAGG 58.879 55.000 0.00 0.00 0.00 3.02
131 132 0.532196 GTCCGGGTATGTTGCTAGGC 60.532 60.000 0.00 0.00 0.00 3.93
132 133 0.689745 TCCGGGTATGTTGCTAGGCT 60.690 55.000 0.00 0.00 0.00 4.58
133 134 0.532862 CCGGGTATGTTGCTAGGCTG 60.533 60.000 0.00 0.00 0.00 4.85
134 135 0.532862 CGGGTATGTTGCTAGGCTGG 60.533 60.000 0.00 0.00 0.00 4.85
135 136 0.179018 GGGTATGTTGCTAGGCTGGG 60.179 60.000 0.00 0.00 0.00 4.45
136 137 0.179018 GGTATGTTGCTAGGCTGGGG 60.179 60.000 0.00 0.00 0.00 4.96
137 138 0.819666 GTATGTTGCTAGGCTGGGGC 60.820 60.000 0.00 0.00 37.82 5.80
138 139 1.278302 TATGTTGCTAGGCTGGGGCA 61.278 55.000 0.00 2.08 40.87 5.36
139 140 1.941403 ATGTTGCTAGGCTGGGGCAT 61.941 55.000 11.21 1.26 40.87 4.40
140 141 1.825622 GTTGCTAGGCTGGGGCATC 60.826 63.158 11.21 7.90 40.87 3.91
141 142 3.060614 TTGCTAGGCTGGGGCATCC 62.061 63.158 11.21 0.00 40.87 3.51
142 143 4.632974 GCTAGGCTGGGGCATCCG 62.633 72.222 0.00 0.00 40.87 4.18
143 144 3.946201 CTAGGCTGGGGCATCCGG 61.946 72.222 0.00 0.00 44.90 5.14
148 149 2.595095 CTGGGGCATCCGGCTTTA 59.405 61.111 0.00 0.00 44.01 1.85
149 150 1.526917 CTGGGGCATCCGGCTTTAG 60.527 63.158 0.00 0.00 44.01 1.85
150 151 1.983119 CTGGGGCATCCGGCTTTAGA 61.983 60.000 0.00 0.00 44.01 2.10
151 152 1.352622 TGGGGCATCCGGCTTTAGAT 61.353 55.000 0.00 0.00 44.01 1.98
152 153 0.890996 GGGGCATCCGGCTTTAGATG 60.891 60.000 0.00 0.00 44.01 2.90
153 154 0.179018 GGGCATCCGGCTTTAGATGT 60.179 55.000 0.00 0.00 41.60 3.06
154 155 1.680338 GGCATCCGGCTTTAGATGTT 58.320 50.000 0.00 0.00 41.60 2.71
155 156 2.486548 GGGCATCCGGCTTTAGATGTTA 60.487 50.000 0.00 0.00 41.60 2.41
156 157 2.808543 GGCATCCGGCTTTAGATGTTAG 59.191 50.000 0.00 0.00 41.60 2.34
157 158 3.494398 GGCATCCGGCTTTAGATGTTAGA 60.494 47.826 0.00 0.00 41.60 2.10
158 159 3.495001 GCATCCGGCTTTAGATGTTAGAC 59.505 47.826 0.00 0.00 41.60 2.59
159 160 4.740934 GCATCCGGCTTTAGATGTTAGACT 60.741 45.833 0.00 0.00 41.60 3.24
160 161 5.360591 CATCCGGCTTTAGATGTTAGACTT 58.639 41.667 0.00 0.00 36.06 3.01
161 162 5.416271 TCCGGCTTTAGATGTTAGACTTT 57.584 39.130 0.00 0.00 0.00 2.66
162 163 5.175859 TCCGGCTTTAGATGTTAGACTTTG 58.824 41.667 0.00 0.00 0.00 2.77
163 164 4.332819 CCGGCTTTAGATGTTAGACTTTGG 59.667 45.833 0.00 0.00 0.00 3.28
164 165 4.935808 CGGCTTTAGATGTTAGACTTTGGT 59.064 41.667 0.00 0.00 0.00 3.67
165 166 5.163854 CGGCTTTAGATGTTAGACTTTGGTG 60.164 44.000 0.00 0.00 0.00 4.17
166 167 5.392057 GGCTTTAGATGTTAGACTTTGGTGC 60.392 44.000 0.00 0.00 0.00 5.01
167 168 5.412904 GCTTTAGATGTTAGACTTTGGTGCT 59.587 40.000 0.00 0.00 0.00 4.40
168 169 6.594159 GCTTTAGATGTTAGACTTTGGTGCTA 59.406 38.462 0.00 0.00 0.00 3.49
169 170 7.281100 GCTTTAGATGTTAGACTTTGGTGCTAT 59.719 37.037 0.00 0.00 0.00 2.97
170 171 8.492673 TTTAGATGTTAGACTTTGGTGCTATG 57.507 34.615 0.00 0.00 0.00 2.23
171 172 6.054860 AGATGTTAGACTTTGGTGCTATGT 57.945 37.500 0.00 0.00 0.00 2.29
172 173 6.109359 AGATGTTAGACTTTGGTGCTATGTC 58.891 40.000 0.00 0.00 0.00 3.06
173 174 5.483685 TGTTAGACTTTGGTGCTATGTCT 57.516 39.130 0.00 0.00 40.52 3.41
174 175 5.237815 TGTTAGACTTTGGTGCTATGTCTG 58.762 41.667 0.00 0.00 38.30 3.51
175 176 5.221641 TGTTAGACTTTGGTGCTATGTCTGT 60.222 40.000 0.00 0.00 38.30 3.41
176 177 4.357918 AGACTTTGGTGCTATGTCTGTT 57.642 40.909 0.00 0.00 36.74 3.16
177 178 4.718961 AGACTTTGGTGCTATGTCTGTTT 58.281 39.130 0.00 0.00 36.74 2.83
178 179 4.516698 AGACTTTGGTGCTATGTCTGTTTG 59.483 41.667 0.00 0.00 36.74 2.93
179 180 3.569701 ACTTTGGTGCTATGTCTGTTTGG 59.430 43.478 0.00 0.00 0.00 3.28
180 181 2.949177 TGGTGCTATGTCTGTTTGGT 57.051 45.000 0.00 0.00 0.00 3.67
181 182 4.359434 TTGGTGCTATGTCTGTTTGGTA 57.641 40.909 0.00 0.00 0.00 3.25
182 183 4.568072 TGGTGCTATGTCTGTTTGGTAT 57.432 40.909 0.00 0.00 0.00 2.73
183 184 4.917385 TGGTGCTATGTCTGTTTGGTATT 58.083 39.130 0.00 0.00 0.00 1.89
184 185 6.056090 TGGTGCTATGTCTGTTTGGTATTA 57.944 37.500 0.00 0.00 0.00 0.98
185 186 6.112734 TGGTGCTATGTCTGTTTGGTATTAG 58.887 40.000 0.00 0.00 0.00 1.73
186 187 5.527582 GGTGCTATGTCTGTTTGGTATTAGG 59.472 44.000 0.00 0.00 0.00 2.69
187 188 5.007724 GTGCTATGTCTGTTTGGTATTAGGC 59.992 44.000 0.00 0.00 0.00 3.93
188 189 5.104527 TGCTATGTCTGTTTGGTATTAGGCT 60.105 40.000 0.00 0.00 0.00 4.58
189 190 5.467063 GCTATGTCTGTTTGGTATTAGGCTC 59.533 44.000 0.00 0.00 0.00 4.70
190 191 3.857052 TGTCTGTTTGGTATTAGGCTCG 58.143 45.455 0.00 0.00 0.00 5.03
191 192 3.195661 GTCTGTTTGGTATTAGGCTCGG 58.804 50.000 0.00 0.00 0.00 4.63
192 193 3.101437 TCTGTTTGGTATTAGGCTCGGA 58.899 45.455 0.00 0.00 0.00 4.55
193 194 3.118884 TCTGTTTGGTATTAGGCTCGGAC 60.119 47.826 0.00 0.00 0.00 4.79
194 195 2.568062 TGTTTGGTATTAGGCTCGGACA 59.432 45.455 0.00 0.00 0.00 4.02
195 196 3.199071 TGTTTGGTATTAGGCTCGGACAT 59.801 43.478 0.00 0.00 0.00 3.06
196 197 4.196971 GTTTGGTATTAGGCTCGGACATT 58.803 43.478 0.00 0.00 0.00 2.71
197 198 4.497291 TTGGTATTAGGCTCGGACATTT 57.503 40.909 0.00 0.00 0.00 2.32
198 199 3.804036 TGGTATTAGGCTCGGACATTTG 58.196 45.455 0.00 0.00 0.00 2.32
199 200 3.139077 GGTATTAGGCTCGGACATTTGG 58.861 50.000 0.00 0.00 0.00 3.28
200 201 1.680338 ATTAGGCTCGGACATTTGGC 58.320 50.000 0.00 0.00 0.00 4.52
201 202 0.326595 TTAGGCTCGGACATTTGGCA 59.673 50.000 0.00 0.00 0.00 4.92
202 203 0.392461 TAGGCTCGGACATTTGGCAC 60.392 55.000 0.00 0.00 0.00 5.01
203 204 2.700773 GGCTCGGACATTTGGCACC 61.701 63.158 0.00 0.00 0.00 5.01
204 205 2.700773 GCTCGGACATTTGGCACCC 61.701 63.158 0.00 0.00 0.00 4.61
205 206 2.034999 TCGGACATTTGGCACCCC 59.965 61.111 0.00 0.00 0.00 4.95
206 207 2.035626 CGGACATTTGGCACCCCT 59.964 61.111 0.00 0.00 0.00 4.79
207 208 1.606313 CGGACATTTGGCACCCCTT 60.606 57.895 0.00 0.00 0.00 3.95
208 209 1.595093 CGGACATTTGGCACCCCTTC 61.595 60.000 0.00 0.00 0.00 3.46
209 210 0.541764 GGACATTTGGCACCCCTTCA 60.542 55.000 0.00 0.00 0.00 3.02
210 211 1.560505 GACATTTGGCACCCCTTCAT 58.439 50.000 0.00 0.00 0.00 2.57
211 212 1.478105 GACATTTGGCACCCCTTCATC 59.522 52.381 0.00 0.00 0.00 2.92
212 213 1.203162 ACATTTGGCACCCCTTCATCA 60.203 47.619 0.00 0.00 0.00 3.07
213 214 1.901159 CATTTGGCACCCCTTCATCAA 59.099 47.619 0.00 0.00 0.00 2.57
214 215 1.631405 TTTGGCACCCCTTCATCAAG 58.369 50.000 0.00 0.00 0.00 3.02
225 226 3.321950 CCTTCATCAAGGGGATAGGAGT 58.678 50.000 0.00 0.00 45.27 3.85
226 227 4.493618 CCTTCATCAAGGGGATAGGAGTA 58.506 47.826 0.00 0.00 45.27 2.59
227 228 4.530161 CCTTCATCAAGGGGATAGGAGTAG 59.470 50.000 0.00 0.00 45.27 2.57
228 229 3.511477 TCATCAAGGGGATAGGAGTAGC 58.489 50.000 0.00 0.00 33.95 3.58
229 230 3.116746 TCATCAAGGGGATAGGAGTAGCA 60.117 47.826 0.00 0.00 33.95 3.49
230 231 3.414759 TCAAGGGGATAGGAGTAGCAA 57.585 47.619 0.00 0.00 0.00 3.91
231 232 3.039011 TCAAGGGGATAGGAGTAGCAAC 58.961 50.000 0.00 0.00 0.00 4.17
232 233 2.771943 CAAGGGGATAGGAGTAGCAACA 59.228 50.000 0.00 0.00 0.00 3.33
233 234 2.683768 AGGGGATAGGAGTAGCAACAG 58.316 52.381 0.00 0.00 0.00 3.16
234 235 2.247635 AGGGGATAGGAGTAGCAACAGA 59.752 50.000 0.00 0.00 0.00 3.41
235 236 3.116551 AGGGGATAGGAGTAGCAACAGAT 60.117 47.826 0.00 0.00 0.00 2.90
236 237 3.007398 GGGGATAGGAGTAGCAACAGATG 59.993 52.174 0.00 0.00 0.00 2.90
237 238 3.643792 GGGATAGGAGTAGCAACAGATGT 59.356 47.826 0.00 0.00 0.00 3.06
238 239 4.101741 GGGATAGGAGTAGCAACAGATGTT 59.898 45.833 0.00 0.00 39.12 2.71
249 250 3.895232 AACAGATGTTGCCTAGACGAT 57.105 42.857 0.00 0.00 36.80 3.73
250 251 3.170791 ACAGATGTTGCCTAGACGATG 57.829 47.619 0.00 0.00 0.00 3.84
251 252 2.159043 ACAGATGTTGCCTAGACGATGG 60.159 50.000 0.00 0.00 0.00 3.51
257 258 3.280920 GCCTAGACGATGGCTTCAG 57.719 57.895 0.00 0.00 45.26 3.02
258 259 0.747255 GCCTAGACGATGGCTTCAGA 59.253 55.000 0.00 0.00 45.26 3.27
259 260 1.537135 GCCTAGACGATGGCTTCAGAC 60.537 57.143 0.00 0.00 45.26 3.51
260 261 1.268794 CCTAGACGATGGCTTCAGACG 60.269 57.143 0.00 0.00 0.00 4.18
261 262 1.402259 CTAGACGATGGCTTCAGACGT 59.598 52.381 0.00 0.00 38.95 4.34
262 263 1.460504 AGACGATGGCTTCAGACGTA 58.539 50.000 0.00 0.00 37.43 3.57
263 264 1.132643 AGACGATGGCTTCAGACGTAC 59.867 52.381 0.00 0.00 37.43 3.67
264 265 1.132643 GACGATGGCTTCAGACGTACT 59.867 52.381 0.00 0.00 37.43 2.73
265 266 1.135373 ACGATGGCTTCAGACGTACTG 60.135 52.381 8.24 8.24 46.97 2.74
321 322 9.991906 AATTAATAAAATAGCTGCATGCATCTT 57.008 25.926 27.41 13.20 45.94 2.40
322 323 9.635520 ATTAATAAAATAGCTGCATGCATCTTC 57.364 29.630 27.41 13.99 45.94 2.87
323 324 4.317671 AAAATAGCTGCATGCATCTTCC 57.682 40.909 27.41 11.06 45.94 3.46
324 325 2.651382 ATAGCTGCATGCATCTTCCA 57.349 45.000 27.41 11.79 45.94 3.53
325 326 1.963172 TAGCTGCATGCATCTTCCAG 58.037 50.000 27.41 12.52 45.94 3.86
326 327 0.255033 AGCTGCATGCATCTTCCAGA 59.745 50.000 22.97 0.00 45.94 3.86
327 328 0.381089 GCTGCATGCATCTTCCAGAC 59.619 55.000 22.97 0.53 42.31 3.51
328 329 0.656259 CTGCATGCATCTTCCAGACG 59.344 55.000 22.97 0.79 0.00 4.18
329 330 0.036105 TGCATGCATCTTCCAGACGT 60.036 50.000 18.46 0.00 0.00 4.34
330 331 1.206849 TGCATGCATCTTCCAGACGTA 59.793 47.619 18.46 0.00 0.00 3.57
331 332 1.863454 GCATGCATCTTCCAGACGTAG 59.137 52.381 14.21 0.00 0.00 3.51
332 333 2.481969 GCATGCATCTTCCAGACGTAGA 60.482 50.000 14.21 0.00 0.00 2.59
333 334 3.379240 CATGCATCTTCCAGACGTAGAG 58.621 50.000 0.00 0.00 0.00 2.43
334 335 1.751351 TGCATCTTCCAGACGTAGAGG 59.249 52.381 0.00 0.00 0.00 3.69
335 336 1.537135 GCATCTTCCAGACGTAGAGGC 60.537 57.143 6.21 6.21 38.34 4.70
336 337 1.067821 CATCTTCCAGACGTAGAGGCC 59.932 57.143 0.00 0.00 0.00 5.19
337 338 0.039180 TCTTCCAGACGTAGAGGCCA 59.961 55.000 5.01 0.00 0.00 5.36
338 339 0.895530 CTTCCAGACGTAGAGGCCAA 59.104 55.000 5.01 0.00 0.00 4.52
339 340 0.895530 TTCCAGACGTAGAGGCCAAG 59.104 55.000 5.01 0.00 0.00 3.61
340 341 0.970937 TCCAGACGTAGAGGCCAAGG 60.971 60.000 5.01 0.00 0.00 3.61
341 342 1.153549 CAGACGTAGAGGCCAAGGC 60.154 63.158 5.01 1.52 41.06 4.35
351 352 2.683475 GCCAAGGCCAGGGTACAT 59.317 61.111 15.27 0.00 34.56 2.29
352 353 1.000359 GCCAAGGCCAGGGTACATT 60.000 57.895 15.27 0.00 34.56 2.71
353 354 1.037579 GCCAAGGCCAGGGTACATTC 61.038 60.000 15.27 0.00 34.56 2.67
354 355 0.625849 CCAAGGCCAGGGTACATTCT 59.374 55.000 5.01 0.00 0.00 2.40
355 356 1.408822 CCAAGGCCAGGGTACATTCTC 60.409 57.143 5.01 0.00 0.00 2.87
356 357 0.919710 AAGGCCAGGGTACATTCTCC 59.080 55.000 5.01 0.00 0.00 3.71
357 358 0.044855 AGGCCAGGGTACATTCTCCT 59.955 55.000 5.01 0.00 0.00 3.69
358 359 0.919710 GGCCAGGGTACATTCTCCTT 59.080 55.000 0.00 0.00 0.00 3.36
359 360 1.285078 GGCCAGGGTACATTCTCCTTT 59.715 52.381 0.00 0.00 0.00 3.11
360 361 2.291605 GGCCAGGGTACATTCTCCTTTT 60.292 50.000 0.00 0.00 0.00 2.27
361 362 3.017442 GCCAGGGTACATTCTCCTTTTC 58.983 50.000 0.00 0.00 0.00 2.29
362 363 3.561313 GCCAGGGTACATTCTCCTTTTCA 60.561 47.826 0.00 0.00 0.00 2.69
363 364 4.662278 CCAGGGTACATTCTCCTTTTCAA 58.338 43.478 0.00 0.00 0.00 2.69
364 365 5.076873 CCAGGGTACATTCTCCTTTTCAAA 58.923 41.667 0.00 0.00 0.00 2.69
365 366 5.716703 CCAGGGTACATTCTCCTTTTCAAAT 59.283 40.000 0.00 0.00 0.00 2.32
366 367 6.889722 CCAGGGTACATTCTCCTTTTCAAATA 59.110 38.462 0.00 0.00 0.00 1.40
367 368 7.396055 CCAGGGTACATTCTCCTTTTCAAATAA 59.604 37.037 0.00 0.00 0.00 1.40
368 369 8.802267 CAGGGTACATTCTCCTTTTCAAATAAA 58.198 33.333 0.00 0.00 0.00 1.40
369 370 9.374711 AGGGTACATTCTCCTTTTCAAATAAAA 57.625 29.630 0.00 0.00 0.00 1.52
370 371 9.990360 GGGTACATTCTCCTTTTCAAATAAAAA 57.010 29.630 0.00 0.00 0.00 1.94
374 375 9.264719 ACATTCTCCTTTTCAAATAAAAAGCAG 57.735 29.630 4.06 0.00 42.37 4.24
375 376 9.264719 CATTCTCCTTTTCAAATAAAAAGCAGT 57.735 29.630 4.06 0.00 42.37 4.40
376 377 8.871686 TTCTCCTTTTCAAATAAAAAGCAGTC 57.128 30.769 4.06 0.00 42.37 3.51
377 378 8.237811 TCTCCTTTTCAAATAAAAAGCAGTCT 57.762 30.769 4.06 0.00 42.37 3.24
378 379 8.137437 TCTCCTTTTCAAATAAAAAGCAGTCTG 58.863 33.333 0.00 0.00 42.37 3.51
379 380 6.701400 TCCTTTTCAAATAAAAAGCAGTCTGC 59.299 34.615 17.48 17.48 42.37 4.26
394 395 6.374565 GCAGTCTGCATTGAAATCTCTATT 57.625 37.500 20.16 0.00 44.26 1.73
395 396 6.793349 GCAGTCTGCATTGAAATCTCTATTT 58.207 36.000 20.16 0.00 44.26 1.40
396 397 7.256286 GCAGTCTGCATTGAAATCTCTATTTT 58.744 34.615 20.16 0.00 44.26 1.82
397 398 7.758528 GCAGTCTGCATTGAAATCTCTATTTTT 59.241 33.333 20.16 0.00 44.26 1.94
429 430 4.487714 TTTAGCAATGGAGGAGGTACTG 57.512 45.455 0.00 0.00 41.55 2.74
430 431 1.958288 AGCAATGGAGGAGGTACTGT 58.042 50.000 0.00 0.00 41.55 3.55
431 432 1.556911 AGCAATGGAGGAGGTACTGTG 59.443 52.381 0.00 0.00 41.55 3.66
432 433 1.279271 GCAATGGAGGAGGTACTGTGT 59.721 52.381 0.00 0.00 41.55 3.72
433 434 2.290323 GCAATGGAGGAGGTACTGTGTT 60.290 50.000 0.00 0.00 41.55 3.32
434 435 3.055385 GCAATGGAGGAGGTACTGTGTTA 60.055 47.826 0.00 0.00 41.55 2.41
435 436 4.564821 GCAATGGAGGAGGTACTGTGTTAA 60.565 45.833 0.00 0.00 41.55 2.01
436 437 5.556915 CAATGGAGGAGGTACTGTGTTAAA 58.443 41.667 0.00 0.00 41.55 1.52
437 438 5.836024 ATGGAGGAGGTACTGTGTTAAAA 57.164 39.130 0.00 0.00 41.55 1.52
438 439 5.633655 TGGAGGAGGTACTGTGTTAAAAA 57.366 39.130 0.00 0.00 41.55 1.94
468 469 2.298411 CTTGTGCAAGCACTGGTTTT 57.702 45.000 23.82 0.00 46.30 2.43
469 470 2.195922 CTTGTGCAAGCACTGGTTTTC 58.804 47.619 23.82 0.00 46.30 2.29
470 471 1.473258 TGTGCAAGCACTGGTTTTCT 58.527 45.000 23.82 0.00 46.30 2.52
471 472 2.649190 TGTGCAAGCACTGGTTTTCTA 58.351 42.857 23.82 0.00 46.30 2.10
472 473 3.020274 TGTGCAAGCACTGGTTTTCTAA 58.980 40.909 23.82 0.00 46.30 2.10
473 474 3.066621 TGTGCAAGCACTGGTTTTCTAAG 59.933 43.478 23.82 0.00 46.30 2.18
474 475 2.622942 TGCAAGCACTGGTTTTCTAAGG 59.377 45.455 0.00 0.00 0.00 2.69
475 476 2.029918 GCAAGCACTGGTTTTCTAAGGG 60.030 50.000 0.00 0.00 0.00 3.95
476 477 2.558359 CAAGCACTGGTTTTCTAAGGGG 59.442 50.000 0.00 0.00 0.00 4.79
477 478 1.780919 AGCACTGGTTTTCTAAGGGGT 59.219 47.619 0.00 0.00 0.00 4.95
478 479 1.886542 GCACTGGTTTTCTAAGGGGTG 59.113 52.381 0.00 0.00 0.00 4.61
479 480 2.514803 CACTGGTTTTCTAAGGGGTGG 58.485 52.381 0.00 0.00 0.00 4.61
480 481 2.141067 ACTGGTTTTCTAAGGGGTGGT 58.859 47.619 0.00 0.00 0.00 4.16
481 482 3.073356 CACTGGTTTTCTAAGGGGTGGTA 59.927 47.826 0.00 0.00 0.00 3.25
482 483 3.920841 ACTGGTTTTCTAAGGGGTGGTAT 59.079 43.478 0.00 0.00 0.00 2.73
483 484 4.263771 ACTGGTTTTCTAAGGGGTGGTATG 60.264 45.833 0.00 0.00 0.00 2.39
484 485 3.021695 GGTTTTCTAAGGGGTGGTATGC 58.978 50.000 0.00 0.00 0.00 3.14
485 486 3.562609 GGTTTTCTAAGGGGTGGTATGCA 60.563 47.826 0.00 0.00 0.00 3.96
486 487 4.083565 GTTTTCTAAGGGGTGGTATGCAA 58.916 43.478 0.00 0.00 0.00 4.08
487 488 3.644966 TTCTAAGGGGTGGTATGCAAG 57.355 47.619 0.00 0.00 0.00 4.01
488 489 2.557869 TCTAAGGGGTGGTATGCAAGT 58.442 47.619 0.00 0.00 0.00 3.16
489 490 2.504175 TCTAAGGGGTGGTATGCAAGTC 59.496 50.000 0.00 0.00 0.00 3.01
490 491 1.372501 AAGGGGTGGTATGCAAGTCT 58.627 50.000 0.00 0.00 0.00 3.24
491 492 1.372501 AGGGGTGGTATGCAAGTCTT 58.627 50.000 0.00 0.00 0.00 3.01
492 493 1.710809 AGGGGTGGTATGCAAGTCTTT 59.289 47.619 0.00 0.00 0.00 2.52
493 494 2.916934 AGGGGTGGTATGCAAGTCTTTA 59.083 45.455 0.00 0.00 0.00 1.85
494 495 3.527665 AGGGGTGGTATGCAAGTCTTTAT 59.472 43.478 0.00 0.00 0.00 1.40
495 496 3.632145 GGGGTGGTATGCAAGTCTTTATG 59.368 47.826 0.00 0.00 0.00 1.90
496 497 3.632145 GGGTGGTATGCAAGTCTTTATGG 59.368 47.826 0.00 0.00 0.00 2.74
497 498 4.270008 GGTGGTATGCAAGTCTTTATGGT 58.730 43.478 0.00 0.00 0.00 3.55
498 499 4.705023 GGTGGTATGCAAGTCTTTATGGTT 59.295 41.667 0.00 0.00 0.00 3.67
499 500 5.393027 GGTGGTATGCAAGTCTTTATGGTTG 60.393 44.000 0.00 0.00 0.00 3.77
500 501 5.414454 GTGGTATGCAAGTCTTTATGGTTGA 59.586 40.000 0.00 0.00 0.00 3.18
501 502 6.007076 TGGTATGCAAGTCTTTATGGTTGAA 58.993 36.000 0.00 0.00 0.00 2.69
502 503 6.072175 TGGTATGCAAGTCTTTATGGTTGAAC 60.072 38.462 0.00 0.00 0.00 3.18
503 504 6.151144 GGTATGCAAGTCTTTATGGTTGAACT 59.849 38.462 0.00 0.00 0.00 3.01
504 505 6.655078 ATGCAAGTCTTTATGGTTGAACTT 57.345 33.333 0.00 0.00 0.00 2.66
505 506 5.830912 TGCAAGTCTTTATGGTTGAACTTG 58.169 37.500 8.32 8.32 37.12 3.16
506 507 5.592282 TGCAAGTCTTTATGGTTGAACTTGA 59.408 36.000 15.14 0.85 36.42 3.02
507 508 6.145535 GCAAGTCTTTATGGTTGAACTTGAG 58.854 40.000 15.14 0.00 36.42 3.02
508 509 6.017109 GCAAGTCTTTATGGTTGAACTTGAGA 60.017 38.462 15.14 0.00 36.42 3.27
509 510 7.468631 GCAAGTCTTTATGGTTGAACTTGAGAA 60.469 37.037 15.14 0.00 36.42 2.87
510 511 8.571336 CAAGTCTTTATGGTTGAACTTGAGAAT 58.429 33.333 7.14 0.00 36.42 2.40
511 512 9.793259 AAGTCTTTATGGTTGAACTTGAGAATA 57.207 29.630 0.00 0.00 0.00 1.75
512 513 9.793259 AGTCTTTATGGTTGAACTTGAGAATAA 57.207 29.630 0.00 0.00 0.00 1.40
515 516 9.346725 CTTTATGGTTGAACTTGAGAATAAAGC 57.653 33.333 0.00 0.00 0.00 3.51
516 517 8.635765 TTATGGTTGAACTTGAGAATAAAGCT 57.364 30.769 0.00 0.00 0.00 3.74
517 518 6.560253 TGGTTGAACTTGAGAATAAAGCTC 57.440 37.500 0.00 0.00 0.00 4.09
518 519 6.299141 TGGTTGAACTTGAGAATAAAGCTCT 58.701 36.000 0.00 0.00 33.57 4.09
519 520 6.772716 TGGTTGAACTTGAGAATAAAGCTCTT 59.227 34.615 0.00 0.00 33.57 2.85
520 521 7.041098 TGGTTGAACTTGAGAATAAAGCTCTTC 60.041 37.037 0.00 0.00 33.57 2.87
521 522 7.041098 GGTTGAACTTGAGAATAAAGCTCTTCA 60.041 37.037 0.00 0.00 33.57 3.02
522 523 7.664082 TGAACTTGAGAATAAAGCTCTTCAG 57.336 36.000 0.00 0.00 33.57 3.02
523 524 7.445121 TGAACTTGAGAATAAAGCTCTTCAGA 58.555 34.615 0.00 0.00 33.57 3.27
524 525 7.933577 TGAACTTGAGAATAAAGCTCTTCAGAA 59.066 33.333 0.00 0.00 33.57 3.02
525 526 8.860780 AACTTGAGAATAAAGCTCTTCAGAAT 57.139 30.769 0.00 0.00 33.57 2.40
526 527 9.950496 AACTTGAGAATAAAGCTCTTCAGAATA 57.050 29.630 0.00 0.00 33.57 1.75
532 533 9.054922 AGAATAAAGCTCTTCAGAATATCAAGC 57.945 33.333 0.00 0.00 0.00 4.01
533 534 5.731599 AAAGCTCTTCAGAATATCAAGCG 57.268 39.130 0.00 0.00 33.62 4.68
534 535 3.129871 AGCTCTTCAGAATATCAAGCGC 58.870 45.455 0.00 0.00 33.62 5.92
535 536 2.868583 GCTCTTCAGAATATCAAGCGCA 59.131 45.455 11.47 0.00 29.96 6.09
536 537 3.497640 GCTCTTCAGAATATCAAGCGCAT 59.502 43.478 11.47 0.00 29.96 4.73
537 538 4.687948 GCTCTTCAGAATATCAAGCGCATA 59.312 41.667 11.47 0.00 29.96 3.14
538 539 5.178252 GCTCTTCAGAATATCAAGCGCATAA 59.822 40.000 11.47 0.00 29.96 1.90
539 540 6.293081 GCTCTTCAGAATATCAAGCGCATAAA 60.293 38.462 11.47 0.00 29.96 1.40
540 541 7.552458 TCTTCAGAATATCAAGCGCATAAAA 57.448 32.000 11.47 0.00 0.00 1.52
541 542 7.984391 TCTTCAGAATATCAAGCGCATAAAAA 58.016 30.769 11.47 0.00 0.00 1.94
542 543 8.623903 TCTTCAGAATATCAAGCGCATAAAAAT 58.376 29.630 11.47 0.00 0.00 1.82
543 544 8.786937 TTCAGAATATCAAGCGCATAAAAATC 57.213 30.769 11.47 0.00 0.00 2.17
544 545 8.158169 TCAGAATATCAAGCGCATAAAAATCT 57.842 30.769 11.47 2.50 0.00 2.40
545 546 9.271828 TCAGAATATCAAGCGCATAAAAATCTA 57.728 29.630 11.47 0.00 0.00 1.98
560 561 9.288576 CATAAAAATCTATGCTATCTTCCACCA 57.711 33.333 0.00 0.00 0.00 4.17
561 562 7.573968 AAAAATCTATGCTATCTTCCACCAC 57.426 36.000 0.00 0.00 0.00 4.16
562 563 6.506538 AAATCTATGCTATCTTCCACCACT 57.493 37.500 0.00 0.00 0.00 4.00
563 564 7.618019 AAATCTATGCTATCTTCCACCACTA 57.382 36.000 0.00 0.00 0.00 2.74
564 565 7.805083 AATCTATGCTATCTTCCACCACTAT 57.195 36.000 0.00 0.00 0.00 2.12
565 566 6.596309 TCTATGCTATCTTCCACCACTATG 57.404 41.667 0.00 0.00 0.00 2.23
566 567 6.314917 TCTATGCTATCTTCCACCACTATGA 58.685 40.000 0.00 0.00 0.00 2.15
567 568 6.956435 TCTATGCTATCTTCCACCACTATGAT 59.044 38.462 0.00 0.00 0.00 2.45
568 569 8.116026 TCTATGCTATCTTCCACCACTATGATA 58.884 37.037 0.00 0.00 0.00 2.15
569 570 6.994421 TGCTATCTTCCACCACTATGATAA 57.006 37.500 0.00 0.00 0.00 1.75
570 571 7.559335 TGCTATCTTCCACCACTATGATAAT 57.441 36.000 0.00 0.00 0.00 1.28
571 572 7.977818 TGCTATCTTCCACCACTATGATAATT 58.022 34.615 0.00 0.00 0.00 1.40
572 573 8.439971 TGCTATCTTCCACCACTATGATAATTT 58.560 33.333 0.00 0.00 0.00 1.82
573 574 8.940952 GCTATCTTCCACCACTATGATAATTTC 58.059 37.037 0.00 0.00 0.00 2.17
574 575 9.442047 CTATCTTCCACCACTATGATAATTTCC 57.558 37.037 0.00 0.00 0.00 3.13
575 576 7.206789 TCTTCCACCACTATGATAATTTCCA 57.793 36.000 0.00 0.00 0.00 3.53
576 577 7.054124 TCTTCCACCACTATGATAATTTCCAC 58.946 38.462 0.00 0.00 0.00 4.02
577 578 6.320434 TCCACCACTATGATAATTTCCACA 57.680 37.500 0.00 0.00 0.00 4.17
578 579 6.726379 TCCACCACTATGATAATTTCCACAA 58.274 36.000 0.00 0.00 0.00 3.33
609 610 3.950087 TGTGAGATTTACATGCATCGC 57.050 42.857 0.00 0.00 0.00 4.58
620 621 0.961857 ATGCATCGCCTTGAGCACAA 60.962 50.000 0.00 0.00 44.04 3.33
636 637 2.606308 GCACAACAGGCATGAGAAACTG 60.606 50.000 4.84 0.00 37.01 3.16
660 661 2.231964 TGAGCCCATTGACATTTTGCTC 59.768 45.455 0.00 0.00 42.99 4.26
665 692 4.340381 GCCCATTGACATTTTGCTCTCTAT 59.660 41.667 0.00 0.00 0.00 1.98
684 711 1.449778 GGTAGCGAACCCTCCTTGC 60.450 63.158 0.03 0.00 43.16 4.01
732 759 1.717645 CGTTAGTGTGTGAACGTAGCC 59.282 52.381 0.00 0.00 42.62 3.93
742 769 4.180817 TGTGAACGTAGCCTCACAATATG 58.819 43.478 16.35 0.00 46.19 1.78
771 798 6.932400 TGGTTTTAGAGAGCGTTCTTATTTGA 59.068 34.615 2.39 0.00 32.53 2.69
842 869 6.288294 GTCACTATGTTGGTATTCTGCCATA 58.712 40.000 0.00 0.00 35.71 2.74
843 870 6.936900 GTCACTATGTTGGTATTCTGCCATAT 59.063 38.462 0.00 0.00 35.71 1.78
1008 1035 4.569180 CCCGCGGGAATGGCAGAT 62.569 66.667 41.82 0.00 37.50 2.90
1009 1036 3.282157 CCGCGGGAATGGCAGATG 61.282 66.667 20.10 0.00 0.00 2.90
1147 1174 2.176273 CCCATCCTTCTCGCGCTTG 61.176 63.158 5.56 0.00 0.00 4.01
1162 1189 2.476185 GCGCTTGTCGATATTGTTTGCT 60.476 45.455 0.00 0.00 41.67 3.91
1163 1190 3.093574 CGCTTGTCGATATTGTTTGCTG 58.906 45.455 0.00 0.00 41.67 4.41
1164 1191 2.848302 GCTTGTCGATATTGTTTGCTGC 59.152 45.455 0.00 0.00 0.00 5.25
1165 1192 3.426695 GCTTGTCGATATTGTTTGCTGCT 60.427 43.478 0.00 0.00 0.00 4.24
1166 1193 4.726416 CTTGTCGATATTGTTTGCTGCTT 58.274 39.130 0.00 0.00 0.00 3.91
1174 1201 1.938625 TGTTTGCTGCTTTGCTTTCC 58.061 45.000 0.00 0.00 0.00 3.13
1311 1338 1.471119 TGAACGGTAAGGAGCTCGAT 58.529 50.000 7.83 1.00 0.00 3.59
1314 1341 0.683504 ACGGTAAGGAGCTCGATGGT 60.684 55.000 7.83 0.00 0.00 3.55
1500 1527 2.764314 TTACGGAGGCGGACGCTAC 61.764 63.158 16.72 10.31 41.60 3.58
1655 1686 5.119279 CCGAGTTATCTTGTCTCTTGTGTTG 59.881 44.000 0.00 0.00 0.00 3.33
1664 1695 3.823873 TGTCTCTTGTGTTGTGTGGTTTT 59.176 39.130 0.00 0.00 0.00 2.43
1723 1754 4.989277 ACTACAATTCGGGTTAGGGTTTT 58.011 39.130 0.00 0.00 0.00 2.43
1778 1809 0.822164 CTACCAAGTTCGGGATCGGT 59.178 55.000 0.00 0.00 36.95 4.69
1784 1815 2.265589 AGTTCGGGATCGGTTGTTTT 57.734 45.000 0.00 0.00 36.95 2.43
1852 1885 1.680989 GTTGGGCCCGCACCTAAAT 60.681 57.895 19.37 0.00 31.25 1.40
1872 1905 2.925724 TCAACCATCTGTTTGACCGTT 58.074 42.857 0.00 0.00 34.00 4.44
1974 2007 0.323908 CTTCTCTCCCCGGTGTCTCT 60.324 60.000 0.00 0.00 0.00 3.10
1996 2029 4.924187 CCGGCGATCCTCCCCTCT 62.924 72.222 9.30 0.00 0.00 3.69
2128 2161 4.385405 GCTGGAGTGCGCACCTCT 62.385 66.667 35.51 19.09 0.00 3.69
2132 2165 4.687215 GAGTGCGCACCTCTGCCA 62.687 66.667 35.51 0.00 40.73 4.92
2178 2211 4.069232 CCGCAGGCGAGGAACAGA 62.069 66.667 16.21 0.00 46.14 3.41
2213 2246 3.303135 AGGCGTGACTCGAGGCAA 61.303 61.111 25.66 4.11 42.86 4.52
2521 2593 4.664688 AGGGACCTGATTGAAAACTCAT 57.335 40.909 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.001293 AGAGCAGAAACTGACGCATCA 59.999 47.619 2.81 0.00 32.44 3.07
1 2 1.392853 CAGAGCAGAAACTGACGCATC 59.607 52.381 2.81 0.00 36.38 3.91
2 3 1.001293 TCAGAGCAGAAACTGACGCAT 59.999 47.619 2.81 0.00 38.08 4.73
3 4 0.389025 TCAGAGCAGAAACTGACGCA 59.611 50.000 2.81 0.00 38.08 5.24
4 5 1.458827 CTTCAGAGCAGAAACTGACGC 59.541 52.381 2.81 0.00 41.82 5.19
5 6 3.018598 TCTTCAGAGCAGAAACTGACG 57.981 47.619 2.81 0.00 41.82 4.35
6 7 5.960113 TCTATCTTCAGAGCAGAAACTGAC 58.040 41.667 2.81 0.00 41.82 3.51
7 8 6.459435 CGATCTATCTTCAGAGCAGAAACTGA 60.459 42.308 2.81 0.00 40.66 3.41
8 9 5.686841 CGATCTATCTTCAGAGCAGAAACTG 59.313 44.000 0.00 0.00 30.18 3.16
9 10 5.592282 TCGATCTATCTTCAGAGCAGAAACT 59.408 40.000 0.00 0.00 30.18 2.66
10 11 5.826586 TCGATCTATCTTCAGAGCAGAAAC 58.173 41.667 0.00 0.00 30.18 2.78
11 12 6.445475 CATCGATCTATCTTCAGAGCAGAAA 58.555 40.000 0.00 0.00 30.18 2.52
12 13 5.048154 CCATCGATCTATCTTCAGAGCAGAA 60.048 44.000 0.00 0.00 30.18 3.02
13 14 4.458642 CCATCGATCTATCTTCAGAGCAGA 59.541 45.833 0.00 0.00 30.18 4.26
14 15 4.458642 TCCATCGATCTATCTTCAGAGCAG 59.541 45.833 0.00 0.00 30.18 4.24
15 16 4.401925 TCCATCGATCTATCTTCAGAGCA 58.598 43.478 0.00 0.00 30.18 4.26
16 17 5.182950 TCTTCCATCGATCTATCTTCAGAGC 59.817 44.000 0.00 0.00 0.00 4.09
17 18 6.611381 GTCTTCCATCGATCTATCTTCAGAG 58.389 44.000 0.00 0.00 0.00 3.35
18 19 5.180304 CGTCTTCCATCGATCTATCTTCAGA 59.820 44.000 0.00 0.00 0.00 3.27
19 20 5.389778 CGTCTTCCATCGATCTATCTTCAG 58.610 45.833 0.00 0.00 0.00 3.02
20 21 4.216472 CCGTCTTCCATCGATCTATCTTCA 59.784 45.833 0.00 0.00 0.00 3.02
21 22 4.216687 ACCGTCTTCCATCGATCTATCTTC 59.783 45.833 0.00 0.00 0.00 2.87
22 23 4.022762 CACCGTCTTCCATCGATCTATCTT 60.023 45.833 0.00 0.00 0.00 2.40
23 24 3.504134 CACCGTCTTCCATCGATCTATCT 59.496 47.826 0.00 0.00 0.00 1.98
24 25 3.366476 CCACCGTCTTCCATCGATCTATC 60.366 52.174 0.00 0.00 0.00 2.08
25 26 2.558795 CCACCGTCTTCCATCGATCTAT 59.441 50.000 0.00 0.00 0.00 1.98
26 27 1.954382 CCACCGTCTTCCATCGATCTA 59.046 52.381 0.00 0.00 0.00 1.98
27 28 0.747255 CCACCGTCTTCCATCGATCT 59.253 55.000 0.00 0.00 0.00 2.75
28 29 0.460311 ACCACCGTCTTCCATCGATC 59.540 55.000 0.00 0.00 0.00 3.69
29 30 0.175760 CACCACCGTCTTCCATCGAT 59.824 55.000 0.00 0.00 0.00 3.59
30 31 0.896479 TCACCACCGTCTTCCATCGA 60.896 55.000 0.00 0.00 0.00 3.59
31 32 0.736325 GTCACCACCGTCTTCCATCG 60.736 60.000 0.00 0.00 0.00 3.84
32 33 0.736325 CGTCACCACCGTCTTCCATC 60.736 60.000 0.00 0.00 0.00 3.51
33 34 1.183030 TCGTCACCACCGTCTTCCAT 61.183 55.000 0.00 0.00 0.00 3.41
34 35 1.802337 CTCGTCACCACCGTCTTCCA 61.802 60.000 0.00 0.00 0.00 3.53
35 36 1.080705 CTCGTCACCACCGTCTTCC 60.081 63.158 0.00 0.00 0.00 3.46
36 37 1.733399 GCTCGTCACCACCGTCTTC 60.733 63.158 0.00 0.00 0.00 2.87
37 38 2.338984 GCTCGTCACCACCGTCTT 59.661 61.111 0.00 0.00 0.00 3.01
38 39 3.681835 GGCTCGTCACCACCGTCT 61.682 66.667 0.00 0.00 0.00 4.18
39 40 3.222354 AAGGCTCGTCACCACCGTC 62.222 63.158 0.00 0.00 0.00 4.79
40 41 3.231736 AAGGCTCGTCACCACCGT 61.232 61.111 0.00 0.00 0.00 4.83
41 42 2.738521 CAAGGCTCGTCACCACCG 60.739 66.667 0.00 0.00 0.00 4.94
42 43 3.050275 GCAAGGCTCGTCACCACC 61.050 66.667 0.00 0.00 0.00 4.61
43 44 1.237285 ATTGCAAGGCTCGTCACCAC 61.237 55.000 4.94 0.00 0.00 4.16
44 45 1.073025 ATTGCAAGGCTCGTCACCA 59.927 52.632 4.94 0.00 0.00 4.17
45 46 1.237285 ACATTGCAAGGCTCGTCACC 61.237 55.000 11.69 0.00 0.00 4.02
46 47 0.110056 CACATTGCAAGGCTCGTCAC 60.110 55.000 11.69 0.00 0.00 3.67
47 48 1.855213 GCACATTGCAAGGCTCGTCA 61.855 55.000 11.69 0.00 44.26 4.35
48 49 1.154150 GCACATTGCAAGGCTCGTC 60.154 57.895 11.69 0.00 44.26 4.20
49 50 2.956987 GCACATTGCAAGGCTCGT 59.043 55.556 11.69 0.00 44.26 4.18
50 51 2.202388 CGCACATTGCAAGGCTCG 60.202 61.111 11.69 10.89 45.36 5.03
51 52 2.505557 GCGCACATTGCAAGGCTC 60.506 61.111 11.69 2.91 45.36 4.70
52 53 2.642254 ATGCGCACATTGCAAGGCT 61.642 52.632 14.90 0.00 46.87 4.58
53 54 2.125832 ATGCGCACATTGCAAGGC 60.126 55.556 14.90 10.53 46.87 4.35
54 55 1.080366 ACATGCGCACATTGCAAGG 60.080 52.632 14.90 10.01 46.87 3.61
55 56 1.348538 CCACATGCGCACATTGCAAG 61.349 55.000 14.90 1.04 46.87 4.01
56 57 1.373121 CCACATGCGCACATTGCAA 60.373 52.632 14.90 0.00 46.87 4.08
57 58 2.258897 CCACATGCGCACATTGCA 59.741 55.556 14.90 0.00 45.36 4.08
58 59 2.089936 CACCACATGCGCACATTGC 61.090 57.895 14.90 0.00 40.69 3.56
59 60 2.089936 GCACCACATGCGCACATTG 61.090 57.895 14.90 10.70 46.55 2.82
60 61 2.259204 GCACCACATGCGCACATT 59.741 55.556 14.90 0.00 46.55 2.71
80 81 0.598562 CGGTCTAGCACACTCACAGT 59.401 55.000 0.00 0.00 0.00 3.55
81 82 0.109086 CCGGTCTAGCACACTCACAG 60.109 60.000 0.00 0.00 0.00 3.66
82 83 0.826256 ACCGGTCTAGCACACTCACA 60.826 55.000 0.00 0.00 0.00 3.58
83 84 0.388649 CACCGGTCTAGCACACTCAC 60.389 60.000 2.59 0.00 0.00 3.51
84 85 0.826256 ACACCGGTCTAGCACACTCA 60.826 55.000 2.59 0.00 0.00 3.41
85 86 0.388649 CACACCGGTCTAGCACACTC 60.389 60.000 2.59 0.00 0.00 3.51
86 87 1.113517 ACACACCGGTCTAGCACACT 61.114 55.000 2.59 0.00 0.00 3.55
87 88 0.944311 CACACACCGGTCTAGCACAC 60.944 60.000 2.59 0.00 0.00 3.82
88 89 1.110518 TCACACACCGGTCTAGCACA 61.111 55.000 2.59 0.00 0.00 4.57
89 90 0.666577 GTCACACACCGGTCTAGCAC 60.667 60.000 2.59 0.00 0.00 4.40
90 91 1.663739 GTCACACACCGGTCTAGCA 59.336 57.895 2.59 0.00 0.00 3.49
91 92 1.080025 GGTCACACACCGGTCTAGC 60.080 63.158 2.59 0.00 34.56 3.42
99 100 2.030562 CGGACTGGGTCACACACC 59.969 66.667 0.14 0.00 45.97 4.16
100 101 2.030562 CCGGACTGGGTCACACAC 59.969 66.667 0.00 0.00 33.68 3.82
109 110 0.828022 TAGCAACATACCCGGACTGG 59.172 55.000 0.73 0.00 37.55 4.00
110 111 1.202533 CCTAGCAACATACCCGGACTG 60.203 57.143 0.73 0.00 0.00 3.51
111 112 1.120530 CCTAGCAACATACCCGGACT 58.879 55.000 0.73 0.00 0.00 3.85
112 113 0.532196 GCCTAGCAACATACCCGGAC 60.532 60.000 0.73 0.00 0.00 4.79
113 114 0.689745 AGCCTAGCAACATACCCGGA 60.690 55.000 0.73 0.00 0.00 5.14
114 115 0.532862 CAGCCTAGCAACATACCCGG 60.533 60.000 0.00 0.00 0.00 5.73
115 116 0.532862 CCAGCCTAGCAACATACCCG 60.533 60.000 0.00 0.00 0.00 5.28
116 117 0.179018 CCCAGCCTAGCAACATACCC 60.179 60.000 0.00 0.00 0.00 3.69
117 118 0.179018 CCCCAGCCTAGCAACATACC 60.179 60.000 0.00 0.00 0.00 2.73
118 119 0.819666 GCCCCAGCCTAGCAACATAC 60.820 60.000 0.00 0.00 0.00 2.39
119 120 1.278302 TGCCCCAGCCTAGCAACATA 61.278 55.000 0.00 0.00 38.69 2.29
120 121 1.941403 ATGCCCCAGCCTAGCAACAT 61.941 55.000 0.00 0.00 40.46 2.71
121 122 2.556840 GATGCCCCAGCCTAGCAACA 62.557 60.000 0.00 0.00 40.46 3.33
122 123 1.825622 GATGCCCCAGCCTAGCAAC 60.826 63.158 0.00 0.00 40.46 4.17
123 124 2.597340 GATGCCCCAGCCTAGCAA 59.403 61.111 0.00 0.00 40.46 3.91
124 125 3.492353 GGATGCCCCAGCCTAGCA 61.492 66.667 0.00 0.00 36.92 3.49
125 126 4.632974 CGGATGCCCCAGCCTAGC 62.633 72.222 0.00 0.00 37.84 3.42
126 127 3.946201 CCGGATGCCCCAGCCTAG 61.946 72.222 0.00 0.00 37.84 3.02
130 131 3.714487 TAAAGCCGGATGCCCCAGC 62.714 63.158 5.05 0.00 42.71 4.85
131 132 1.526917 CTAAAGCCGGATGCCCCAG 60.527 63.158 5.05 0.00 42.71 4.45
132 133 1.352622 ATCTAAAGCCGGATGCCCCA 61.353 55.000 5.05 0.00 42.71 4.96
133 134 0.890996 CATCTAAAGCCGGATGCCCC 60.891 60.000 5.05 0.00 42.71 5.80
134 135 0.179018 ACATCTAAAGCCGGATGCCC 60.179 55.000 5.05 0.00 41.93 5.36
135 136 1.680338 AACATCTAAAGCCGGATGCC 58.320 50.000 5.05 0.00 41.93 4.40
136 137 3.495001 GTCTAACATCTAAAGCCGGATGC 59.505 47.826 5.05 0.00 41.93 3.91
137 138 4.950050 AGTCTAACATCTAAAGCCGGATG 58.050 43.478 5.05 0.22 43.30 3.51
138 139 5.615925 AAGTCTAACATCTAAAGCCGGAT 57.384 39.130 5.05 0.00 0.00 4.18
139 140 5.175859 CAAAGTCTAACATCTAAAGCCGGA 58.824 41.667 5.05 0.00 0.00 5.14
140 141 4.332819 CCAAAGTCTAACATCTAAAGCCGG 59.667 45.833 0.00 0.00 0.00 6.13
141 142 4.935808 ACCAAAGTCTAACATCTAAAGCCG 59.064 41.667 0.00 0.00 0.00 5.52
142 143 5.392057 GCACCAAAGTCTAACATCTAAAGCC 60.392 44.000 0.00 0.00 0.00 4.35
143 144 5.412904 AGCACCAAAGTCTAACATCTAAAGC 59.587 40.000 0.00 0.00 0.00 3.51
144 145 8.607459 CATAGCACCAAAGTCTAACATCTAAAG 58.393 37.037 0.00 0.00 0.00 1.85
145 146 8.100791 ACATAGCACCAAAGTCTAACATCTAAA 58.899 33.333 0.00 0.00 0.00 1.85
146 147 7.620880 ACATAGCACCAAAGTCTAACATCTAA 58.379 34.615 0.00 0.00 0.00 2.10
147 148 7.124298 AGACATAGCACCAAAGTCTAACATCTA 59.876 37.037 0.00 0.00 37.75 1.98
148 149 6.054860 ACATAGCACCAAAGTCTAACATCT 57.945 37.500 0.00 0.00 0.00 2.90
149 150 6.036517 CAGACATAGCACCAAAGTCTAACATC 59.963 42.308 0.00 0.00 37.45 3.06
150 151 5.877012 CAGACATAGCACCAAAGTCTAACAT 59.123 40.000 0.00 0.00 37.45 2.71
151 152 5.221641 ACAGACATAGCACCAAAGTCTAACA 60.222 40.000 0.00 0.00 37.45 2.41
152 153 5.238583 ACAGACATAGCACCAAAGTCTAAC 58.761 41.667 0.00 0.00 37.45 2.34
153 154 5.483685 ACAGACATAGCACCAAAGTCTAA 57.516 39.130 0.00 0.00 37.45 2.10
154 155 5.483685 AACAGACATAGCACCAAAGTCTA 57.516 39.130 0.00 0.00 37.45 2.59
155 156 4.357918 AACAGACATAGCACCAAAGTCT 57.642 40.909 0.00 0.00 39.95 3.24
156 157 4.320494 CCAAACAGACATAGCACCAAAGTC 60.320 45.833 0.00 0.00 0.00 3.01
157 158 3.569701 CCAAACAGACATAGCACCAAAGT 59.430 43.478 0.00 0.00 0.00 2.66
158 159 3.569701 ACCAAACAGACATAGCACCAAAG 59.430 43.478 0.00 0.00 0.00 2.77
159 160 3.561143 ACCAAACAGACATAGCACCAAA 58.439 40.909 0.00 0.00 0.00 3.28
160 161 3.222173 ACCAAACAGACATAGCACCAA 57.778 42.857 0.00 0.00 0.00 3.67
161 162 2.949177 ACCAAACAGACATAGCACCA 57.051 45.000 0.00 0.00 0.00 4.17
162 163 5.527582 CCTAATACCAAACAGACATAGCACC 59.472 44.000 0.00 0.00 0.00 5.01
163 164 5.007724 GCCTAATACCAAACAGACATAGCAC 59.992 44.000 0.00 0.00 0.00 4.40
164 165 5.104527 AGCCTAATACCAAACAGACATAGCA 60.105 40.000 0.00 0.00 0.00 3.49
165 166 5.368989 AGCCTAATACCAAACAGACATAGC 58.631 41.667 0.00 0.00 0.00 2.97
166 167 5.692204 CGAGCCTAATACCAAACAGACATAG 59.308 44.000 0.00 0.00 0.00 2.23
167 168 5.452776 CCGAGCCTAATACCAAACAGACATA 60.453 44.000 0.00 0.00 0.00 2.29
168 169 4.442706 CGAGCCTAATACCAAACAGACAT 58.557 43.478 0.00 0.00 0.00 3.06
169 170 3.369052 CCGAGCCTAATACCAAACAGACA 60.369 47.826 0.00 0.00 0.00 3.41
170 171 3.118884 TCCGAGCCTAATACCAAACAGAC 60.119 47.826 0.00 0.00 0.00 3.51
171 172 3.101437 TCCGAGCCTAATACCAAACAGA 58.899 45.455 0.00 0.00 0.00 3.41
172 173 3.195661 GTCCGAGCCTAATACCAAACAG 58.804 50.000 0.00 0.00 0.00 3.16
173 174 2.568062 TGTCCGAGCCTAATACCAAACA 59.432 45.455 0.00 0.00 0.00 2.83
174 175 3.255969 TGTCCGAGCCTAATACCAAAC 57.744 47.619 0.00 0.00 0.00 2.93
175 176 4.497291 AATGTCCGAGCCTAATACCAAA 57.503 40.909 0.00 0.00 0.00 3.28
176 177 4.196193 CAAATGTCCGAGCCTAATACCAA 58.804 43.478 0.00 0.00 0.00 3.67
177 178 3.433031 CCAAATGTCCGAGCCTAATACCA 60.433 47.826 0.00 0.00 0.00 3.25
178 179 3.139077 CCAAATGTCCGAGCCTAATACC 58.861 50.000 0.00 0.00 0.00 2.73
179 180 2.548480 GCCAAATGTCCGAGCCTAATAC 59.452 50.000 0.00 0.00 0.00 1.89
180 181 2.171659 TGCCAAATGTCCGAGCCTAATA 59.828 45.455 0.00 0.00 0.00 0.98
181 182 1.064758 TGCCAAATGTCCGAGCCTAAT 60.065 47.619 0.00 0.00 0.00 1.73
182 183 0.326595 TGCCAAATGTCCGAGCCTAA 59.673 50.000 0.00 0.00 0.00 2.69
183 184 0.392461 GTGCCAAATGTCCGAGCCTA 60.392 55.000 0.00 0.00 0.00 3.93
184 185 1.675641 GTGCCAAATGTCCGAGCCT 60.676 57.895 0.00 0.00 0.00 4.58
185 186 2.700773 GGTGCCAAATGTCCGAGCC 61.701 63.158 0.00 0.00 0.00 4.70
186 187 2.700773 GGGTGCCAAATGTCCGAGC 61.701 63.158 0.00 0.00 0.00 5.03
187 188 2.046285 GGGGTGCCAAATGTCCGAG 61.046 63.158 0.00 0.00 0.00 4.63
188 189 2.034999 GGGGTGCCAAATGTCCGA 59.965 61.111 0.00 0.00 0.00 4.55
189 190 1.595093 GAAGGGGTGCCAAATGTCCG 61.595 60.000 0.00 0.00 0.00 4.79
190 191 0.541764 TGAAGGGGTGCCAAATGTCC 60.542 55.000 0.00 0.00 0.00 4.02
191 192 1.478105 GATGAAGGGGTGCCAAATGTC 59.522 52.381 0.00 0.00 0.00 3.06
192 193 1.203162 TGATGAAGGGGTGCCAAATGT 60.203 47.619 0.00 0.00 0.00 2.71
193 194 1.559368 TGATGAAGGGGTGCCAAATG 58.441 50.000 0.00 0.00 0.00 2.32
194 195 2.181975 CTTGATGAAGGGGTGCCAAAT 58.818 47.619 0.00 0.00 0.00 2.32
195 196 1.631405 CTTGATGAAGGGGTGCCAAA 58.369 50.000 0.00 0.00 0.00 3.28
196 197 0.251742 CCTTGATGAAGGGGTGCCAA 60.252 55.000 2.47 0.00 44.76 4.52
197 198 1.383799 CCTTGATGAAGGGGTGCCA 59.616 57.895 2.47 0.00 44.76 4.92
198 199 4.344237 CCTTGATGAAGGGGTGCC 57.656 61.111 2.47 0.00 44.76 5.01
205 206 4.020662 GCTACTCCTATCCCCTTGATGAAG 60.021 50.000 0.00 0.00 34.76 3.02
206 207 3.904339 GCTACTCCTATCCCCTTGATGAA 59.096 47.826 0.00 0.00 34.76 2.57
207 208 3.116746 TGCTACTCCTATCCCCTTGATGA 60.117 47.826 0.00 0.00 34.76 2.92
208 209 3.242867 TGCTACTCCTATCCCCTTGATG 58.757 50.000 0.00 0.00 34.76 3.07
209 210 3.637821 TGCTACTCCTATCCCCTTGAT 57.362 47.619 0.00 0.00 37.49 2.57
210 211 3.039011 GTTGCTACTCCTATCCCCTTGA 58.961 50.000 0.00 0.00 0.00 3.02
211 212 2.771943 TGTTGCTACTCCTATCCCCTTG 59.228 50.000 0.00 0.00 0.00 3.61
212 213 3.041946 CTGTTGCTACTCCTATCCCCTT 58.958 50.000 0.00 0.00 0.00 3.95
213 214 2.247635 TCTGTTGCTACTCCTATCCCCT 59.752 50.000 0.00 0.00 0.00 4.79
214 215 2.679082 TCTGTTGCTACTCCTATCCCC 58.321 52.381 0.00 0.00 0.00 4.81
215 216 3.643792 ACATCTGTTGCTACTCCTATCCC 59.356 47.826 0.00 0.00 0.00 3.85
216 217 4.946478 ACATCTGTTGCTACTCCTATCC 57.054 45.455 0.00 0.00 0.00 2.59
229 230 3.525537 CATCGTCTAGGCAACATCTGTT 58.474 45.455 0.00 0.00 39.12 3.16
230 231 2.159043 CCATCGTCTAGGCAACATCTGT 60.159 50.000 0.00 0.00 41.41 3.41
231 232 2.477825 CCATCGTCTAGGCAACATCTG 58.522 52.381 0.00 0.00 41.41 2.90
232 233 2.898729 CCATCGTCTAGGCAACATCT 57.101 50.000 0.00 0.00 41.41 2.90
240 241 1.268794 CGTCTGAAGCCATCGTCTAGG 60.269 57.143 0.00 0.00 0.00 3.02
241 242 1.402259 ACGTCTGAAGCCATCGTCTAG 59.598 52.381 0.00 0.00 31.07 2.43
242 243 1.460504 ACGTCTGAAGCCATCGTCTA 58.539 50.000 0.00 0.00 31.07 2.59
243 244 1.132643 GTACGTCTGAAGCCATCGTCT 59.867 52.381 0.00 0.00 35.57 4.18
244 245 1.132643 AGTACGTCTGAAGCCATCGTC 59.867 52.381 0.00 0.00 35.57 4.20
245 246 1.135373 CAGTACGTCTGAAGCCATCGT 60.135 52.381 8.72 0.00 46.27 3.73
246 247 1.550065 CAGTACGTCTGAAGCCATCG 58.450 55.000 8.72 0.00 46.27 3.84
295 296 9.991906 AAGATGCATGCAGCTATTTTATTAATT 57.008 25.926 36.30 15.15 42.29 1.40
296 297 9.635520 GAAGATGCATGCAGCTATTTTATTAAT 57.364 29.630 36.30 18.21 42.29 1.40
297 298 8.084073 GGAAGATGCATGCAGCTATTTTATTAA 58.916 33.333 36.30 2.66 42.29 1.40
298 299 7.231115 TGGAAGATGCATGCAGCTATTTTATTA 59.769 33.333 36.30 15.24 42.29 0.98
299 300 6.041182 TGGAAGATGCATGCAGCTATTTTATT 59.959 34.615 36.30 20.46 42.29 1.40
300 301 5.537295 TGGAAGATGCATGCAGCTATTTTAT 59.463 36.000 36.30 21.21 42.29 1.40
301 302 4.888823 TGGAAGATGCATGCAGCTATTTTA 59.111 37.500 36.30 18.97 42.29 1.52
302 303 3.702548 TGGAAGATGCATGCAGCTATTTT 59.297 39.130 36.30 22.36 42.29 1.82
303 304 3.293337 TGGAAGATGCATGCAGCTATTT 58.707 40.909 36.30 22.74 42.29 1.40
304 305 2.885266 CTGGAAGATGCATGCAGCTATT 59.115 45.455 36.30 23.50 42.29 1.73
305 306 2.105993 TCTGGAAGATGCATGCAGCTAT 59.894 45.455 36.30 25.49 42.29 2.97
306 307 1.487558 TCTGGAAGATGCATGCAGCTA 59.512 47.619 36.30 21.31 42.29 3.32
307 308 0.255033 TCTGGAAGATGCATGCAGCT 59.745 50.000 31.79 31.79 45.31 4.24
308 309 2.789842 TCTGGAAGATGCATGCAGC 58.210 52.632 27.98 27.98 38.67 5.25
318 319 0.039180 TGGCCTCTACGTCTGGAAGA 59.961 55.000 3.32 0.00 43.69 2.87
319 320 0.895530 TTGGCCTCTACGTCTGGAAG 59.104 55.000 3.32 0.00 0.00 3.46
320 321 0.895530 CTTGGCCTCTACGTCTGGAA 59.104 55.000 3.32 0.00 0.00 3.53
321 322 0.970937 CCTTGGCCTCTACGTCTGGA 60.971 60.000 3.32 0.00 0.00 3.86
322 323 1.517832 CCTTGGCCTCTACGTCTGG 59.482 63.158 3.32 0.00 0.00 3.86
323 324 1.153549 GCCTTGGCCTCTACGTCTG 60.154 63.158 3.32 0.00 0.00 3.51
324 325 2.359967 GGCCTTGGCCTCTACGTCT 61.360 63.158 22.47 0.00 0.00 4.18
325 326 2.187163 GGCCTTGGCCTCTACGTC 59.813 66.667 22.47 0.00 0.00 4.34
326 327 2.606519 TGGCCTTGGCCTCTACGT 60.607 61.111 28.37 0.00 0.00 3.57
327 328 2.187946 CTGGCCTTGGCCTCTACG 59.812 66.667 28.37 10.26 0.00 3.51
328 329 2.592308 CCTGGCCTTGGCCTCTAC 59.408 66.667 28.37 5.17 0.00 2.59
329 330 2.189558 TACCCTGGCCTTGGCCTCTA 62.190 60.000 28.37 10.27 0.00 2.43
330 331 3.579451 TACCCTGGCCTTGGCCTCT 62.579 63.158 28.37 12.27 0.00 3.69
331 332 3.015145 TACCCTGGCCTTGGCCTC 61.015 66.667 28.37 6.60 0.00 4.70
332 333 3.339093 GTACCCTGGCCTTGGCCT 61.339 66.667 28.37 13.00 0.00 5.19
333 334 2.514516 AATGTACCCTGGCCTTGGCC 62.515 60.000 22.91 22.91 0.00 5.36
334 335 1.000359 AATGTACCCTGGCCTTGGC 60.000 57.895 3.32 2.49 0.00 4.52
335 336 0.625849 AGAATGTACCCTGGCCTTGG 59.374 55.000 3.32 6.98 0.00 3.61
336 337 1.408822 GGAGAATGTACCCTGGCCTTG 60.409 57.143 3.32 0.00 0.00 3.61
337 338 0.919710 GGAGAATGTACCCTGGCCTT 59.080 55.000 3.32 0.00 0.00 4.35
338 339 0.044855 AGGAGAATGTACCCTGGCCT 59.955 55.000 3.32 0.00 0.00 5.19
339 340 0.919710 AAGGAGAATGTACCCTGGCC 59.080 55.000 0.00 0.00 0.00 5.36
340 341 2.808906 AAAGGAGAATGTACCCTGGC 57.191 50.000 0.00 0.00 0.00 4.85
341 342 4.301072 TGAAAAGGAGAATGTACCCTGG 57.699 45.455 0.00 0.00 0.00 4.45
342 343 6.840780 ATTTGAAAAGGAGAATGTACCCTG 57.159 37.500 0.00 0.00 0.00 4.45
343 344 8.950007 TTTATTTGAAAAGGAGAATGTACCCT 57.050 30.769 0.00 0.00 0.00 4.34
344 345 9.990360 TTTTTATTTGAAAAGGAGAATGTACCC 57.010 29.630 0.00 0.00 0.00 3.69
354 355 6.701400 GCAGACTGCTTTTTATTTGAAAAGGA 59.299 34.615 20.41 7.83 43.50 3.36
355 356 6.479660 TGCAGACTGCTTTTTATTTGAAAAGG 59.520 34.615 26.94 0.00 45.31 3.11
356 357 7.467557 TGCAGACTGCTTTTTATTTGAAAAG 57.532 32.000 26.94 5.89 45.31 2.27
357 358 8.336806 CAATGCAGACTGCTTTTTATTTGAAAA 58.663 29.630 26.94 2.97 45.31 2.29
358 359 7.710044 TCAATGCAGACTGCTTTTTATTTGAAA 59.290 29.630 26.94 3.42 45.31 2.69
359 360 7.208777 TCAATGCAGACTGCTTTTTATTTGAA 58.791 30.769 26.94 3.62 45.31 2.69
360 361 6.747125 TCAATGCAGACTGCTTTTTATTTGA 58.253 32.000 26.94 16.51 45.31 2.69
361 362 7.410800 TTCAATGCAGACTGCTTTTTATTTG 57.589 32.000 26.94 14.68 45.31 2.32
362 363 8.611654 ATTTCAATGCAGACTGCTTTTTATTT 57.388 26.923 26.94 8.68 45.31 1.40
363 364 8.092687 AGATTTCAATGCAGACTGCTTTTTATT 58.907 29.630 26.94 15.23 45.31 1.40
364 365 7.609056 AGATTTCAATGCAGACTGCTTTTTAT 58.391 30.769 26.94 17.55 45.31 1.40
365 366 6.985117 AGATTTCAATGCAGACTGCTTTTTA 58.015 32.000 26.94 14.46 45.31 1.52
366 367 5.850614 AGATTTCAATGCAGACTGCTTTTT 58.149 33.333 26.94 15.24 45.31 1.94
367 368 5.243283 AGAGATTTCAATGCAGACTGCTTTT 59.757 36.000 26.94 17.54 45.31 2.27
368 369 4.765856 AGAGATTTCAATGCAGACTGCTTT 59.234 37.500 26.94 23.18 45.31 3.51
369 370 4.333690 AGAGATTTCAATGCAGACTGCTT 58.666 39.130 26.94 18.71 45.31 3.91
370 371 3.952931 AGAGATTTCAATGCAGACTGCT 58.047 40.909 26.94 10.88 45.31 4.24
371 372 6.374565 AATAGAGATTTCAATGCAGACTGC 57.625 37.500 20.86 20.86 45.29 4.40
402 403 9.784376 AGTACCTCCTCCATTGCTAAATATATA 57.216 33.333 0.00 0.00 0.00 0.86
403 404 8.543774 CAGTACCTCCTCCATTGCTAAATATAT 58.456 37.037 0.00 0.00 0.00 0.86
404 405 7.512746 ACAGTACCTCCTCCATTGCTAAATATA 59.487 37.037 0.00 0.00 0.00 0.86
405 406 6.330250 ACAGTACCTCCTCCATTGCTAAATAT 59.670 38.462 0.00 0.00 0.00 1.28
406 407 5.665812 ACAGTACCTCCTCCATTGCTAAATA 59.334 40.000 0.00 0.00 0.00 1.40
407 408 4.475016 ACAGTACCTCCTCCATTGCTAAAT 59.525 41.667 0.00 0.00 0.00 1.40
408 409 3.844211 ACAGTACCTCCTCCATTGCTAAA 59.156 43.478 0.00 0.00 0.00 1.85
409 410 3.197766 CACAGTACCTCCTCCATTGCTAA 59.802 47.826 0.00 0.00 0.00 3.09
410 411 2.766263 CACAGTACCTCCTCCATTGCTA 59.234 50.000 0.00 0.00 0.00 3.49
411 412 1.556911 CACAGTACCTCCTCCATTGCT 59.443 52.381 0.00 0.00 0.00 3.91
412 413 1.279271 ACACAGTACCTCCTCCATTGC 59.721 52.381 0.00 0.00 0.00 3.56
413 414 3.703001 AACACAGTACCTCCTCCATTG 57.297 47.619 0.00 0.00 0.00 2.82
414 415 5.836024 TTTAACACAGTACCTCCTCCATT 57.164 39.130 0.00 0.00 0.00 3.16
415 416 5.836024 TTTTAACACAGTACCTCCTCCAT 57.164 39.130 0.00 0.00 0.00 3.41
416 417 5.633655 TTTTTAACACAGTACCTCCTCCA 57.366 39.130 0.00 0.00 0.00 3.86
449 450 2.159198 AGAAAACCAGTGCTTGCACAAG 60.159 45.455 24.82 17.80 41.24 3.16
450 451 1.824230 AGAAAACCAGTGCTTGCACAA 59.176 42.857 24.82 0.00 0.00 3.33
451 452 1.473258 AGAAAACCAGTGCTTGCACA 58.527 45.000 24.82 0.00 0.00 4.57
452 453 3.550842 CCTTAGAAAACCAGTGCTTGCAC 60.551 47.826 16.98 16.98 0.00 4.57
453 454 2.622942 CCTTAGAAAACCAGTGCTTGCA 59.377 45.455 0.00 0.00 0.00 4.08
454 455 2.029918 CCCTTAGAAAACCAGTGCTTGC 60.030 50.000 0.00 0.00 0.00 4.01
455 456 2.558359 CCCCTTAGAAAACCAGTGCTTG 59.442 50.000 0.00 0.00 0.00 4.01
456 457 2.177016 ACCCCTTAGAAAACCAGTGCTT 59.823 45.455 0.00 0.00 0.00 3.91
457 458 1.780919 ACCCCTTAGAAAACCAGTGCT 59.219 47.619 0.00 0.00 0.00 4.40
458 459 1.886542 CACCCCTTAGAAAACCAGTGC 59.113 52.381 0.00 0.00 0.00 4.40
459 460 2.158519 ACCACCCCTTAGAAAACCAGTG 60.159 50.000 0.00 0.00 0.00 3.66
460 461 2.141067 ACCACCCCTTAGAAAACCAGT 58.859 47.619 0.00 0.00 0.00 4.00
461 462 2.971901 ACCACCCCTTAGAAAACCAG 57.028 50.000 0.00 0.00 0.00 4.00
462 463 3.562609 GCATACCACCCCTTAGAAAACCA 60.563 47.826 0.00 0.00 0.00 3.67
463 464 3.021695 GCATACCACCCCTTAGAAAACC 58.978 50.000 0.00 0.00 0.00 3.27
464 465 3.692690 TGCATACCACCCCTTAGAAAAC 58.307 45.455 0.00 0.00 0.00 2.43
465 466 4.202631 ACTTGCATACCACCCCTTAGAAAA 60.203 41.667 0.00 0.00 0.00 2.29
466 467 3.332485 ACTTGCATACCACCCCTTAGAAA 59.668 43.478 0.00 0.00 0.00 2.52
467 468 2.916934 ACTTGCATACCACCCCTTAGAA 59.083 45.455 0.00 0.00 0.00 2.10
468 469 2.504175 GACTTGCATACCACCCCTTAGA 59.496 50.000 0.00 0.00 0.00 2.10
469 470 2.505819 AGACTTGCATACCACCCCTTAG 59.494 50.000 0.00 0.00 0.00 2.18
470 471 2.557869 AGACTTGCATACCACCCCTTA 58.442 47.619 0.00 0.00 0.00 2.69
471 472 1.372501 AGACTTGCATACCACCCCTT 58.627 50.000 0.00 0.00 0.00 3.95
472 473 1.372501 AAGACTTGCATACCACCCCT 58.627 50.000 0.00 0.00 0.00 4.79
473 474 2.215942 AAAGACTTGCATACCACCCC 57.784 50.000 0.00 0.00 0.00 4.95
474 475 3.632145 CCATAAAGACTTGCATACCACCC 59.368 47.826 0.00 0.00 0.00 4.61
475 476 4.270008 ACCATAAAGACTTGCATACCACC 58.730 43.478 0.00 0.00 0.00 4.61
476 477 5.414454 TCAACCATAAAGACTTGCATACCAC 59.586 40.000 0.00 0.00 0.00 4.16
477 478 5.565509 TCAACCATAAAGACTTGCATACCA 58.434 37.500 0.00 0.00 0.00 3.25
478 479 6.151144 AGTTCAACCATAAAGACTTGCATACC 59.849 38.462 0.00 0.00 0.00 2.73
479 480 7.145932 AGTTCAACCATAAAGACTTGCATAC 57.854 36.000 0.00 0.00 0.00 2.39
480 481 7.446931 TCAAGTTCAACCATAAAGACTTGCATA 59.553 33.333 8.68 0.00 34.92 3.14
481 482 6.265196 TCAAGTTCAACCATAAAGACTTGCAT 59.735 34.615 8.68 0.00 34.92 3.96
482 483 5.592282 TCAAGTTCAACCATAAAGACTTGCA 59.408 36.000 8.68 0.00 34.92 4.08
483 484 6.017109 TCTCAAGTTCAACCATAAAGACTTGC 60.017 38.462 8.68 0.00 34.92 4.01
484 485 7.496529 TCTCAAGTTCAACCATAAAGACTTG 57.503 36.000 7.51 7.51 35.87 3.16
485 486 8.697507 ATTCTCAAGTTCAACCATAAAGACTT 57.302 30.769 0.00 0.00 0.00 3.01
486 487 9.793259 TTATTCTCAAGTTCAACCATAAAGACT 57.207 29.630 0.00 0.00 0.00 3.24
489 490 9.346725 GCTTTATTCTCAAGTTCAACCATAAAG 57.653 33.333 0.00 0.00 36.60 1.85
490 491 9.077885 AGCTTTATTCTCAAGTTCAACCATAAA 57.922 29.630 0.00 0.00 0.00 1.40
491 492 8.635765 AGCTTTATTCTCAAGTTCAACCATAA 57.364 30.769 0.00 0.00 0.00 1.90
492 493 8.103305 AGAGCTTTATTCTCAAGTTCAACCATA 58.897 33.333 0.00 0.00 34.75 2.74
493 494 6.944862 AGAGCTTTATTCTCAAGTTCAACCAT 59.055 34.615 0.00 0.00 34.75 3.55
494 495 6.299141 AGAGCTTTATTCTCAAGTTCAACCA 58.701 36.000 0.00 0.00 34.75 3.67
495 496 6.809630 AGAGCTTTATTCTCAAGTTCAACC 57.190 37.500 0.00 0.00 34.75 3.77
496 497 7.865707 TGAAGAGCTTTATTCTCAAGTTCAAC 58.134 34.615 8.25 0.00 34.75 3.18
497 498 7.933577 TCTGAAGAGCTTTATTCTCAAGTTCAA 59.066 33.333 8.25 0.00 34.75 2.69
498 499 7.445121 TCTGAAGAGCTTTATTCTCAAGTTCA 58.555 34.615 8.25 0.00 34.75 3.18
499 500 7.897575 TCTGAAGAGCTTTATTCTCAAGTTC 57.102 36.000 8.25 0.00 33.02 3.01
500 501 8.860780 ATTCTGAAGAGCTTTATTCTCAAGTT 57.139 30.769 0.00 0.00 33.15 2.66
506 507 9.054922 GCTTGATATTCTGAAGAGCTTTATTCT 57.945 33.333 1.83 0.00 0.00 2.40
507 508 8.008844 CGCTTGATATTCTGAAGAGCTTTATTC 58.991 37.037 1.83 0.00 0.00 1.75
508 509 7.519649 GCGCTTGATATTCTGAAGAGCTTTATT 60.520 37.037 0.00 0.00 38.86 1.40
509 510 6.073331 GCGCTTGATATTCTGAAGAGCTTTAT 60.073 38.462 0.00 0.00 38.86 1.40
510 511 5.235186 GCGCTTGATATTCTGAAGAGCTTTA 59.765 40.000 0.00 0.00 38.86 1.85
511 512 4.034975 GCGCTTGATATTCTGAAGAGCTTT 59.965 41.667 0.00 0.00 38.86 3.51
512 513 3.559242 GCGCTTGATATTCTGAAGAGCTT 59.441 43.478 0.00 0.00 38.86 3.74
513 514 3.129871 GCGCTTGATATTCTGAAGAGCT 58.870 45.455 0.00 0.00 38.86 4.09
514 515 2.868583 TGCGCTTGATATTCTGAAGAGC 59.131 45.455 9.73 0.00 41.32 4.09
515 516 6.775939 TTATGCGCTTGATATTCTGAAGAG 57.224 37.500 9.73 0.00 0.00 2.85
516 517 7.552458 TTTTATGCGCTTGATATTCTGAAGA 57.448 32.000 9.73 0.00 0.00 2.87
517 518 8.792831 ATTTTTATGCGCTTGATATTCTGAAG 57.207 30.769 9.73 0.00 0.00 3.02
518 519 8.623903 AGATTTTTATGCGCTTGATATTCTGAA 58.376 29.630 9.73 0.00 0.00 3.02
519 520 8.158169 AGATTTTTATGCGCTTGATATTCTGA 57.842 30.769 9.73 0.00 0.00 3.27
522 523 8.792538 GCATAGATTTTTATGCGCTTGATATTC 58.207 33.333 9.73 1.00 44.40 1.75
523 524 8.679288 GCATAGATTTTTATGCGCTTGATATT 57.321 30.769 9.73 0.00 44.40 1.28
534 535 9.288576 TGGTGGAAGATAGCATAGATTTTTATG 57.711 33.333 0.00 0.00 34.78 1.90
535 536 9.289782 GTGGTGGAAGATAGCATAGATTTTTAT 57.710 33.333 0.00 0.00 0.00 1.40
536 537 8.494433 AGTGGTGGAAGATAGCATAGATTTTTA 58.506 33.333 0.00 0.00 0.00 1.52
537 538 7.349598 AGTGGTGGAAGATAGCATAGATTTTT 58.650 34.615 0.00 0.00 0.00 1.94
538 539 6.904626 AGTGGTGGAAGATAGCATAGATTTT 58.095 36.000 0.00 0.00 0.00 1.82
539 540 6.506538 AGTGGTGGAAGATAGCATAGATTT 57.493 37.500 0.00 0.00 0.00 2.17
540 541 7.455953 TCATAGTGGTGGAAGATAGCATAGATT 59.544 37.037 0.00 0.00 0.00 2.40
541 542 6.956435 TCATAGTGGTGGAAGATAGCATAGAT 59.044 38.462 0.00 0.00 0.00 1.98
542 543 6.314917 TCATAGTGGTGGAAGATAGCATAGA 58.685 40.000 0.00 0.00 0.00 1.98
543 544 6.596309 TCATAGTGGTGGAAGATAGCATAG 57.404 41.667 0.00 0.00 0.00 2.23
544 545 8.664669 TTATCATAGTGGTGGAAGATAGCATA 57.335 34.615 0.00 0.00 0.00 3.14
545 546 7.559335 TTATCATAGTGGTGGAAGATAGCAT 57.441 36.000 0.00 0.00 0.00 3.79
546 547 6.994421 TTATCATAGTGGTGGAAGATAGCA 57.006 37.500 0.00 0.00 0.00 3.49
547 548 8.854614 AAATTATCATAGTGGTGGAAGATAGC 57.145 34.615 0.00 0.00 0.00 2.97
548 549 9.442047 GGAAATTATCATAGTGGTGGAAGATAG 57.558 37.037 0.00 0.00 0.00 2.08
549 550 8.944138 TGGAAATTATCATAGTGGTGGAAGATA 58.056 33.333 0.00 0.00 0.00 1.98
550 551 7.721399 GTGGAAATTATCATAGTGGTGGAAGAT 59.279 37.037 0.00 0.00 0.00 2.40
551 552 7.054124 GTGGAAATTATCATAGTGGTGGAAGA 58.946 38.462 0.00 0.00 0.00 2.87
552 553 6.828273 TGTGGAAATTATCATAGTGGTGGAAG 59.172 38.462 0.00 0.00 0.00 3.46
553 554 6.726379 TGTGGAAATTATCATAGTGGTGGAA 58.274 36.000 0.00 0.00 0.00 3.53
554 555 6.320434 TGTGGAAATTATCATAGTGGTGGA 57.680 37.500 0.00 0.00 0.00 4.02
555 556 6.603201 ACTTGTGGAAATTATCATAGTGGTGG 59.397 38.462 0.00 0.00 0.00 4.61
556 557 7.465916 CGACTTGTGGAAATTATCATAGTGGTG 60.466 40.741 0.00 0.00 0.00 4.17
557 558 6.538742 CGACTTGTGGAAATTATCATAGTGGT 59.461 38.462 0.00 0.00 0.00 4.16
558 559 6.761242 TCGACTTGTGGAAATTATCATAGTGG 59.239 38.462 0.00 0.00 0.00 4.00
559 560 7.770801 TCGACTTGTGGAAATTATCATAGTG 57.229 36.000 0.00 0.00 0.00 2.74
560 561 8.964476 AATCGACTTGTGGAAATTATCATAGT 57.036 30.769 0.00 0.00 0.00 2.12
561 562 9.869844 GAAATCGACTTGTGGAAATTATCATAG 57.130 33.333 0.00 0.00 0.00 2.23
562 563 9.613428 AGAAATCGACTTGTGGAAATTATCATA 57.387 29.630 0.00 0.00 0.00 2.15
563 564 8.511604 AGAAATCGACTTGTGGAAATTATCAT 57.488 30.769 0.00 0.00 0.00 2.45
564 565 7.921786 AGAAATCGACTTGTGGAAATTATCA 57.078 32.000 0.00 0.00 0.00 2.15
565 566 8.606727 CAAGAAATCGACTTGTGGAAATTATC 57.393 34.615 6.18 0.00 39.57 1.75
576 577 7.796838 TGTAAATCTCACAAGAAATCGACTTG 58.203 34.615 11.53 11.53 46.69 3.16
577 578 7.962964 TGTAAATCTCACAAGAAATCGACTT 57.037 32.000 0.00 0.00 34.49 3.01
578 579 7.413438 GCATGTAAATCTCACAAGAAATCGACT 60.413 37.037 0.00 0.00 34.49 4.18
609 610 0.242825 CATGCCTGTTGTGCTCAAGG 59.757 55.000 0.50 1.75 33.97 3.61
620 621 3.554934 TCAAACAGTTTCTCATGCCTGT 58.445 40.909 0.00 0.00 39.73 4.00
636 637 3.187022 GCAAAATGTCAATGGGCTCAAAC 59.813 43.478 0.00 0.00 0.00 2.93
684 711 1.076777 ATGGAACCCATGGAAGGCG 60.077 57.895 15.22 0.00 43.39 5.52
742 769 2.371910 ACGCTCTCTAAAACCAGCTC 57.628 50.000 0.00 0.00 0.00 4.09
771 798 2.490509 TGGTGTCGACATTGTAGATCGT 59.509 45.455 23.12 0.00 37.16 3.73
842 869 0.176680 GTCCAGCTGACACCGATCAT 59.823 55.000 17.39 0.00 43.85 2.45
843 870 1.591703 GTCCAGCTGACACCGATCA 59.408 57.895 17.39 0.00 43.85 2.92
941 968 2.635427 GGAGAGAAGAAGACAACCCACT 59.365 50.000 0.00 0.00 0.00 4.00
1143 1170 2.848302 GCAGCAAACAATATCGACAAGC 59.152 45.455 0.00 0.00 0.00 4.01
1147 1174 3.301642 GCAAAGCAGCAAACAATATCGAC 59.698 43.478 0.00 0.00 0.00 4.20
1162 1189 0.249699 TCGAGTCGGAAAGCAAAGCA 60.250 50.000 13.54 0.00 0.00 3.91
1163 1190 0.164002 GTCGAGTCGGAAAGCAAAGC 59.836 55.000 13.54 0.00 0.00 3.51
1164 1191 0.790814 GGTCGAGTCGGAAAGCAAAG 59.209 55.000 13.54 0.00 0.00 2.77
1165 1192 0.105224 TGGTCGAGTCGGAAAGCAAA 59.895 50.000 13.54 0.00 0.00 3.68
1166 1193 0.320374 ATGGTCGAGTCGGAAAGCAA 59.680 50.000 13.54 0.00 0.00 3.91
1174 1201 3.710044 CCATGCATGGTCGAGTCG 58.290 61.111 33.68 6.09 43.05 4.18
1311 1338 3.964221 GACGACGATGCTGCGACCA 62.964 63.158 0.00 0.00 34.83 4.02
1314 1341 2.086426 GTTGACGACGATGCTGCGA 61.086 57.895 0.00 0.00 34.83 5.10
1479 1506 4.842091 CGTCCGCCTCCGTAACCG 62.842 72.222 0.00 0.00 0.00 4.44
1621 1652 1.955080 AGATAACTCGGGATCACGACC 59.045 52.381 17.88 3.53 38.06 4.79
1655 1686 5.871465 AAAACACAAATGGAAAACCACAC 57.129 34.783 0.00 0.00 0.00 3.82
1750 1781 4.081862 TCCCGAACTTGGTAGTTATCAGTG 60.082 45.833 0.00 0.00 44.51 3.66
1751 1782 4.091549 TCCCGAACTTGGTAGTTATCAGT 58.908 43.478 0.00 0.00 44.51 3.41
1872 1905 7.040755 CCCATATGTCAGTTAACAGTCAAACAA 60.041 37.037 8.61 0.00 31.50 2.83
2064 2097 1.402787 CAACTCCACCACCAAGCTTT 58.597 50.000 0.00 0.00 0.00 3.51
2196 2229 3.288308 CTTGCCTCGAGTCACGCCT 62.288 63.158 12.31 0.00 42.26 5.52
2277 2347 3.751246 GCCTTGCCTTGCATGCGA 61.751 61.111 14.09 10.84 38.76 5.10
2310 2380 4.443266 GCAGCGCCGTTCCTCTCT 62.443 66.667 2.29 0.00 0.00 3.10
2541 2613 6.697641 ATCAGGTCCCTGTAAGTTTTCTAA 57.302 37.500 12.88 0.00 43.96 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.