Multiple sequence alignment - TraesCS6A01G216300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G216300 chr6A 100.000 8402 0 0 1 8402 398187010 398178609 0.000000e+00 15516.0
1 TraesCS6A01G216300 chr6A 98.438 128 1 1 6259 6385 398180632 398180505 3.050000e-54 224.0
2 TraesCS6A01G216300 chr6A 98.438 128 1 1 6379 6506 398180752 398180626 3.050000e-54 224.0
3 TraesCS6A01G216300 chr6A 97.778 45 1 0 4798 4842 398182170 398182126 2.510000e-10 78.7
4 TraesCS6A01G216300 chr6A 97.778 45 1 0 4841 4885 398182213 398182169 2.510000e-10 78.7
5 TraesCS6A01G216300 chr6D 96.519 2528 47 16 2342 4842 277135579 277138092 0.000000e+00 4143.0
6 TraesCS6A01G216300 chr6D 96.895 2061 39 3 4841 6884 277138048 277140100 0.000000e+00 3428.0
7 TraesCS6A01G216300 chr6D 90.816 1960 119 28 1 1957 277133678 277135579 0.000000e+00 2566.0
8 TraesCS6A01G216300 chr6D 91.809 586 27 7 7827 8402 277142798 277143372 0.000000e+00 797.0
9 TraesCS6A01G216300 chr6D 87.598 637 59 10 3064 3688 203459746 203459118 0.000000e+00 721.0
10 TraesCS6A01G216300 chr6D 96.339 437 14 1 6926 7360 277140094 277140530 0.000000e+00 717.0
11 TraesCS6A01G216300 chr6D 87.379 309 19 11 7534 7837 277140862 277141155 3.760000e-88 337.0
12 TraesCS6A01G216300 chr6D 84.877 324 38 6 2665 2982 203460058 203459740 4.890000e-82 316.0
13 TraesCS6A01G216300 chr6D 96.875 128 3 1 6379 6506 277139483 277139609 6.610000e-51 213.0
14 TraesCS6A01G216300 chr6D 96.875 128 3 1 6259 6385 277139603 277139730 6.610000e-51 213.0
15 TraesCS6A01G216300 chr6D 78.799 283 29 17 1690 1957 76055567 76055833 2.430000e-35 161.0
16 TraesCS6A01G216300 chr6B 97.743 1285 21 3 2395 3674 439062821 439064102 0.000000e+00 2206.0
17 TraesCS6A01G216300 chr6B 90.487 1703 101 28 1 1673 439060419 439062090 0.000000e+00 2191.0
18 TraesCS6A01G216300 chr6B 95.619 1187 33 9 5062 6230 439064789 439065974 0.000000e+00 1886.0
19 TraesCS6A01G216300 chr6B 90.289 1071 51 18 6616 7672 439066662 439067693 0.000000e+00 1352.0
20 TraesCS6A01G216300 chr6B 95.636 550 14 5 4526 5065 439064118 439064667 0.000000e+00 874.0
21 TraesCS6A01G216300 chr6B 90.302 629 36 15 7779 8402 439067736 439068344 0.000000e+00 800.0
22 TraesCS6A01G216300 chr6B 94.974 378 19 0 6226 6603 439066052 439066429 2.020000e-165 593.0
23 TraesCS6A01G216300 chr6B 94.521 292 13 2 1666 1957 439062331 439062619 1.660000e-121 448.0
24 TraesCS6A01G216300 chr6B 96.094 128 4 1 6259 6385 439066205 439066332 3.070000e-49 207.0
25 TraesCS6A01G216300 chr6B 95.161 124 6 0 6383 6506 439066088 439066211 6.650000e-46 196.0
26 TraesCS6A01G216300 chr6B 97.778 45 1 0 4798 4842 439064443 439064487 2.510000e-10 78.7
27 TraesCS6A01G216300 chr6B 82.955 88 9 6 1821 1908 65715593 65715674 3.250000e-09 75.0
28 TraesCS6A01G216300 chr6B 95.556 45 2 0 4841 4885 439064400 439064444 1.170000e-08 73.1
29 TraesCS6A01G216300 chr6B 81.818 88 12 4 1821 1908 65715361 65715444 4.210000e-08 71.3
30 TraesCS6A01G216300 chr6B 83.824 68 5 6 1890 1957 126185490 126185551 9.110000e-05 60.2
31 TraesCS6A01G216300 chr4B 88.114 631 63 7 3064 3688 484266242 484265618 0.000000e+00 739.0
32 TraesCS6A01G216300 chr4B 85.537 242 32 2 2743 2982 479491554 479491314 5.040000e-62 250.0
33 TraesCS6A01G216300 chr3B 86.875 640 63 9 3064 3688 279499176 279498543 0.000000e+00 697.0
34 TraesCS6A01G216300 chr3B 91.623 382 29 3 3064 3443 366546383 366546763 7.470000e-145 525.0
35 TraesCS6A01G216300 chr3B 85.350 314 42 3 2662 2973 266683464 266683775 1.050000e-83 322.0
36 TraesCS6A01G216300 chr3B 82.961 358 53 6 2627 2982 279499521 279499170 4.890000e-82 316.0
37 TraesCS6A01G216300 chr3B 96.970 66 2 0 1691 1756 236120983 236121048 2.480000e-20 111.0
38 TraesCS6A01G216300 chr1B 86.250 640 67 10 3064 3688 420223332 420223965 0.000000e+00 675.0
39 TraesCS6A01G216300 chr1B 86.120 634 67 9 3065 3683 200647866 200647239 0.000000e+00 664.0
40 TraesCS6A01G216300 chr1B 82.961 358 53 6 2627 2982 420222987 420223338 4.890000e-82 316.0
41 TraesCS6A01G216300 chr1B 81.844 358 56 7 2627 2982 200648211 200647861 8.250000e-75 292.0
42 TraesCS6A01G216300 chr1B 88.462 104 10 2 1690 1792 103351546 103351648 3.180000e-24 124.0
43 TraesCS6A01G216300 chr2B 91.099 382 31 3 3064 3443 539959596 539959976 1.620000e-141 514.0
44 TraesCS6A01G216300 chr2B 83.520 358 47 5 2627 2982 539959255 539959602 2.930000e-84 324.0
45 TraesCS6A01G216300 chr2B 94.595 37 1 1 1917 1953 177133482 177133447 1.000000e-03 56.5
46 TraesCS6A01G216300 chr3D 87.500 376 42 5 1947 2322 573027194 573027564 6.030000e-116 429.0
47 TraesCS6A01G216300 chr3D 84.960 379 51 6 1946 2322 604300100 604300474 6.160000e-101 379.0
48 TraesCS6A01G216300 chr3D 92.000 75 6 0 5965 6039 602862228 602862302 1.150000e-18 106.0
49 TraesCS6A01G216300 chr2D 86.667 390 49 2 1935 2322 75563523 75563911 6.030000e-116 429.0
50 TraesCS6A01G216300 chr7A 87.432 366 46 0 1957 2322 498321261 498321626 1.010000e-113 422.0
51 TraesCS6A01G216300 chr7A 86.387 191 18 6 6454 6637 326046734 326046923 1.430000e-47 202.0
52 TraesCS6A01G216300 chr7A 92.308 52 4 0 6333 6384 326046734 326046785 3.250000e-09 75.0
53 TraesCS6A01G216300 chr5B 87.228 368 43 4 1957 2322 387152733 387153098 4.690000e-112 416.0
54 TraesCS6A01G216300 chr5D 86.207 377 48 3 1957 2330 434932668 434932293 1.020000e-108 405.0
55 TraesCS6A01G216300 chr4D 86.813 364 46 2 1959 2322 11147594 11147233 1.020000e-108 405.0
56 TraesCS6A01G216300 chr4D 79.545 220 21 13 1690 1897 399220497 399220290 1.470000e-27 135.0
57 TraesCS6A01G216300 chr4D 92.000 75 6 0 5965 6039 134960541 134960467 1.150000e-18 106.0
58 TraesCS6A01G216300 chr4D 100.000 28 0 0 502 529 6391656 6391629 1.500000e-02 52.8
59 TraesCS6A01G216300 chr1D 86.027 365 51 0 1956 2320 198439582 198439946 7.910000e-105 392.0
60 TraesCS6A01G216300 chr1D 78.049 287 31 12 1691 1962 92321249 92320980 1.460000e-32 152.0
61 TraesCS6A01G216300 chr1D 78.814 236 32 6 1690 1908 69500943 69501177 8.790000e-30 143.0
62 TraesCS6A01G216300 chr1D 92.000 75 6 0 5965 6039 212448041 212448115 1.150000e-18 106.0
63 TraesCS6A01G216300 chr1D 92.000 75 6 0 5965 6039 275789043 275789117 1.150000e-18 106.0
64 TraesCS6A01G216300 chr4A 84.171 398 53 9 1955 2344 659827143 659827538 2.210000e-100 377.0
65 TraesCS6A01G216300 chr4A 85.797 345 40 4 3349 3688 648403398 648403058 2.880000e-94 357.0
66 TraesCS6A01G216300 chr4A 86.911 191 17 6 6454 6637 598242371 598242560 3.070000e-49 207.0
67 TraesCS6A01G216300 chr4A 92.308 52 4 0 6333 6384 598242371 598242422 3.250000e-09 75.0
68 TraesCS6A01G216300 chr1A 89.944 179 11 5 6464 6636 424726747 424726570 3.050000e-54 224.0
69 TraesCS6A01G216300 chr1A 88.889 180 12 4 6464 6636 227068298 227068476 1.840000e-51 215.0
70 TraesCS6A01G216300 chr1A 77.352 287 37 14 1690 1962 88795053 88794781 2.440000e-30 145.0
71 TraesCS6A01G216300 chr1A 88.889 117 11 2 6454 6568 30272393 30272509 8.790000e-30 143.0
72 TraesCS6A01G216300 chr1A 92.000 75 6 0 5965 6039 94666404 94666478 1.150000e-18 106.0
73 TraesCS6A01G216300 chr1A 100.000 43 0 0 6343 6385 424726747 424726705 6.990000e-11 80.5
74 TraesCS6A01G216300 chr3A 89.011 182 12 4 6464 6638 608337276 608337096 1.420000e-52 219.0
75 TraesCS6A01G216300 chr3A 84.071 113 11 6 1691 1796 168844787 168844675 1.490000e-17 102.0
76 TraesCS6A01G216300 chr7D 92.000 75 6 0 5965 6039 382087331 382087257 1.150000e-18 106.0
77 TraesCS6A01G216300 chr7D 92.000 75 6 0 5965 6039 626713663 626713737 1.150000e-18 106.0
78 TraesCS6A01G216300 chr7D 91.667 60 4 1 1903 1962 440255765 440255707 1.940000e-11 82.4
79 TraesCS6A01G216300 chr5A 100.000 43 0 0 6343 6385 496034163 496034205 6.990000e-11 80.5
80 TraesCS6A01G216300 chrUn 90.385 52 2 3 1912 1962 94850061 94850012 1.960000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G216300 chr6A 398178609 398187010 8401 True 15516.000000 15516 100.000000 1 8402 1 chr6A.!!$R1 8401
1 TraesCS6A01G216300 chr6D 277133678 277143372 9694 False 1551.750000 4143 94.188375 1 8402 8 chr6D.!!$F2 8401
2 TraesCS6A01G216300 chr6D 203459118 203460058 940 True 518.500000 721 86.237500 2665 3688 2 chr6D.!!$R1 1023
3 TraesCS6A01G216300 chr6B 439060419 439068344 7925 False 908.733333 2206 94.513333 1 8402 12 chr6B.!!$F3 8401
4 TraesCS6A01G216300 chr4B 484265618 484266242 624 True 739.000000 739 88.114000 3064 3688 1 chr4B.!!$R2 624
5 TraesCS6A01G216300 chr3B 279498543 279499521 978 True 506.500000 697 84.918000 2627 3688 2 chr3B.!!$R1 1061
6 TraesCS6A01G216300 chr1B 420222987 420223965 978 False 495.500000 675 84.605500 2627 3688 2 chr1B.!!$F2 1061
7 TraesCS6A01G216300 chr1B 200647239 200648211 972 True 478.000000 664 83.982000 2627 3683 2 chr1B.!!$R1 1056
8 TraesCS6A01G216300 chr2B 539959255 539959976 721 False 419.000000 514 87.309500 2627 3443 2 chr2B.!!$F1 816

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
286 287 0.251077 AGGACGGGTCTAGTTCGTGT 60.251 55.000 11.11 0.00 37.25 4.49 F
757 773 0.325577 GCCCCATTTCCCAGGAATGT 60.326 55.000 0.00 0.00 33.79 2.71 F
1989 2271 0.167908 CGTGTGTTGCAATGCGGTAT 59.832 50.000 0.59 0.00 0.00 2.73 F
2169 2451 0.250945 TGCCCGTGATTTGCCTTACA 60.251 50.000 0.00 0.00 0.00 2.41 F
2283 2565 0.481128 GAAGGGGTGGTGGGAAGAAA 59.519 55.000 0.00 0.00 0.00 2.52 F
3957 4390 0.447801 GCTTATGCACCGGTTCAGTG 59.552 55.000 13.53 6.33 39.41 3.66 F
4285 4723 1.002468 CTTGTGTGTGCAGCCTGTAAC 60.002 52.381 0.00 0.00 0.00 2.50 F
4466 4909 2.201708 TCCGTGTGTACTGGCCGAA 61.202 57.895 0.00 0.00 0.00 4.30 F
6001 6642 3.166679 GGTGCCAGGTTAATAAAACCCA 58.833 45.455 3.33 0.00 41.18 4.51 F
6880 7871 0.247736 CCTGTGTCCCTTCCTTCTCG 59.752 60.000 0.00 0.00 0.00 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1970 2252 0.167908 ATACCGCATTGCAACACACG 59.832 50.000 0.00 3.10 0.00 4.49 R
2267 2549 0.187606 ACTTTTCTTCCCACCACCCC 59.812 55.000 0.00 0.00 0.00 4.95 R
3717 4150 1.654105 GGTCGGAGCGCATTATAATCG 59.346 52.381 11.47 10.88 0.00 3.34 R
3948 4381 2.040544 GTCCATGGGCACTGAACCG 61.041 63.158 12.68 0.00 0.00 4.44 R
4251 4689 0.670546 CACAAGTTCCCGCTCGTCAT 60.671 55.000 0.00 0.00 0.00 3.06 R
5370 5995 1.150827 CGTGAGCTCAGCAATGTCAA 58.849 50.000 18.89 0.00 0.00 3.18 R
6001 6642 1.143073 AGAGGAAGGCGGAAACAGTTT 59.857 47.619 0.00 0.00 0.00 2.66 R
6294 7017 6.673076 ATTTCAGTGAAATGTCGTAGAATGCG 60.673 38.462 26.51 0.00 42.06 4.73 R
6902 7893 0.034337 GACGTAACCACCAGCTGGAA 59.966 55.000 39.19 15.22 43.95 3.53 R
7721 8881 0.037326 CTTGTGGCGGCACTTCTCTA 60.037 55.000 37.33 17.72 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.122512 ACATATATTTCCACCTCGACTCG 57.877 43.478 0.00 0.00 0.00 4.18
83 84 9.883142 TGGATCAACTTTTCAAACAAAACTATT 57.117 25.926 0.00 0.00 0.00 1.73
139 140 5.106948 CGATGACAAAAGACACATAACAGCT 60.107 40.000 0.00 0.00 0.00 4.24
143 144 4.023707 ACAAAAGACACATAACAGCTGAGC 60.024 41.667 23.35 0.00 0.00 4.26
144 145 3.692257 AAGACACATAACAGCTGAGCT 57.308 42.857 23.35 0.00 40.77 4.09
203 204 1.841556 GGTCGCTATCCATCCCCCA 60.842 63.158 0.00 0.00 0.00 4.96
225 226 0.597637 ATACGCGCACACTAGGATGC 60.598 55.000 5.73 9.78 38.52 3.91
267 268 0.391130 GCTCATTGGCGAGTGTGGTA 60.391 55.000 0.00 0.00 35.33 3.25
285 286 1.399791 GTAGGACGGGTCTAGTTCGTG 59.600 57.143 11.11 0.00 37.25 4.35
286 287 0.251077 AGGACGGGTCTAGTTCGTGT 60.251 55.000 11.11 0.00 37.25 4.49
294 295 1.516386 CTAGTTCGTGTCGCGCCAT 60.516 57.895 0.00 0.00 41.07 4.40
296 297 1.348538 TAGTTCGTGTCGCGCCATTG 61.349 55.000 0.00 0.00 41.07 2.82
297 298 4.083600 TTCGTGTCGCGCCATTGC 62.084 61.111 0.00 0.00 41.07 3.56
312 313 2.285718 CCATTGCGTTTGTTGTTTGCTG 60.286 45.455 0.00 0.00 0.00 4.41
362 366 3.090037 TGGTTTGTTCTTTCCGGTTTCA 58.910 40.909 0.00 0.00 0.00 2.69
365 369 5.536916 TGGTTTGTTCTTTCCGGTTTCATAT 59.463 36.000 0.00 0.00 0.00 1.78
366 370 6.041069 TGGTTTGTTCTTTCCGGTTTCATATT 59.959 34.615 0.00 0.00 0.00 1.28
599 610 7.693969 ATACTGAACCCTCTCAAAGAAATTG 57.306 36.000 0.00 0.00 40.58 2.32
757 773 0.325577 GCCCCATTTCCCAGGAATGT 60.326 55.000 0.00 0.00 33.79 2.71
805 821 4.655027 GACGTTTTTCTTCCGTTTCTGTT 58.345 39.130 0.00 0.00 34.51 3.16
827 843 2.344025 CTACGAACTAAGGCCCACAAC 58.656 52.381 0.00 0.00 0.00 3.32
856 872 2.159179 AAAACTGAGGCCCACAAACT 57.841 45.000 0.00 0.00 0.00 2.66
862 878 3.012518 CTGAGGCCCACAAACTAATGAG 58.987 50.000 0.00 0.00 0.00 2.90
889 905 0.325933 TGTCAGTGAGGAAGGCATGG 59.674 55.000 0.00 0.00 0.00 3.66
974 990 2.833582 TGATCTCTCCGCCGGTCC 60.834 66.667 1.63 0.00 0.00 4.46
1101 1117 2.764925 CTGACGTAACGCGCGACTG 61.765 63.158 39.36 23.81 46.11 3.51
1429 1445 3.995669 CACGTTGACACCGCCACG 61.996 66.667 0.00 0.00 0.00 4.94
1468 1484 3.244596 ACCAGAAGAACTTGTCTAAGGCC 60.245 47.826 0.00 0.00 38.26 5.19
1664 1701 2.112297 TGGGTTGCAACGGGAGTC 59.888 61.111 22.67 8.02 46.69 3.36
1673 1710 3.482436 TGCAACGGGAGTCTAAACATTT 58.518 40.909 0.00 0.00 46.69 2.32
1674 1711 3.886505 TGCAACGGGAGTCTAAACATTTT 59.113 39.130 0.00 0.00 46.69 1.82
1676 1713 5.180492 TGCAACGGGAGTCTAAACATTTTAG 59.820 40.000 0.03 0.03 46.69 1.85
1793 2075 5.953183 TGCCATCTTATTGTTAAGCACTTG 58.047 37.500 0.00 0.00 35.72 3.16
1843 2125 4.080129 TGGGAGAAAAATCAGAGATGGGAG 60.080 45.833 0.00 0.00 0.00 4.30
1874 2156 2.106511 CAAACAGGAGAAGGGAAGGTGA 59.893 50.000 0.00 0.00 0.00 4.02
1924 2206 2.300437 AGAGGTTCGACAAAAGAGAGGG 59.700 50.000 0.00 0.00 0.00 4.30
1925 2207 2.037381 GAGGTTCGACAAAAGAGAGGGT 59.963 50.000 0.00 0.00 0.00 4.34
1926 2208 2.143925 GGTTCGACAAAAGAGAGGGTG 58.856 52.381 0.00 0.00 0.00 4.61
1927 2209 2.224209 GGTTCGACAAAAGAGAGGGTGA 60.224 50.000 0.00 0.00 0.00 4.02
1928 2210 3.463944 GTTCGACAAAAGAGAGGGTGAA 58.536 45.455 0.00 0.00 0.00 3.18
1929 2211 3.830744 TCGACAAAAGAGAGGGTGAAA 57.169 42.857 0.00 0.00 0.00 2.69
1930 2212 3.463944 TCGACAAAAGAGAGGGTGAAAC 58.536 45.455 0.00 0.00 0.00 2.78
1931 2213 3.118555 TCGACAAAAGAGAGGGTGAAACA 60.119 43.478 0.00 0.00 39.98 2.83
1932 2214 3.248602 CGACAAAAGAGAGGGTGAAACAG 59.751 47.826 0.00 0.00 39.98 3.16
1933 2215 3.555966 ACAAAAGAGAGGGTGAAACAGG 58.444 45.455 0.00 0.00 39.98 4.00
1934 2216 3.202151 ACAAAAGAGAGGGTGAAACAGGA 59.798 43.478 0.00 0.00 39.98 3.86
1935 2217 4.207165 CAAAAGAGAGGGTGAAACAGGAA 58.793 43.478 0.00 0.00 39.98 3.36
1936 2218 3.493767 AAGAGAGGGTGAAACAGGAAC 57.506 47.619 0.00 0.00 39.98 3.62
1937 2219 1.700186 AGAGAGGGTGAAACAGGAACC 59.300 52.381 0.00 0.00 39.98 3.62
1938 2220 1.700186 GAGAGGGTGAAACAGGAACCT 59.300 52.381 0.00 0.00 39.98 3.50
1939 2221 2.106684 GAGAGGGTGAAACAGGAACCTT 59.893 50.000 0.00 0.00 39.98 3.50
1940 2222 3.323775 AGAGGGTGAAACAGGAACCTTA 58.676 45.455 0.00 0.00 39.98 2.69
1941 2223 3.072622 AGAGGGTGAAACAGGAACCTTAC 59.927 47.826 0.00 0.00 39.98 2.34
1942 2224 2.148768 GGGTGAAACAGGAACCTTACG 58.851 52.381 0.00 0.00 39.98 3.18
1943 2225 2.486013 GGGTGAAACAGGAACCTTACGT 60.486 50.000 0.00 0.00 39.98 3.57
1944 2226 3.208594 GGTGAAACAGGAACCTTACGTT 58.791 45.455 0.00 0.00 39.98 3.99
1945 2227 3.249320 GGTGAAACAGGAACCTTACGTTC 59.751 47.826 0.00 0.00 44.63 3.95
1946 2228 4.124970 GTGAAACAGGAACCTTACGTTCT 58.875 43.478 0.00 0.00 43.39 3.01
1947 2229 4.573607 GTGAAACAGGAACCTTACGTTCTT 59.426 41.667 0.00 0.00 43.39 2.52
1948 2230 5.065602 GTGAAACAGGAACCTTACGTTCTTT 59.934 40.000 0.00 0.00 43.39 2.52
1949 2231 6.403964 GTGAAACAGGAACCTTACGTTCTTTT 60.404 38.462 0.00 1.40 43.39 2.27
1950 2232 7.839297 GTGAAACAGGAACCTTACGTTCTTTTT 60.839 37.037 0.00 1.12 43.39 1.94
1970 2252 8.789762 TCTTTTTAAAGTACTAGAACAATGCCC 58.210 33.333 0.00 0.00 37.31 5.36
1971 2253 6.730960 TTTAAAGTACTAGAACAATGCCCG 57.269 37.500 0.00 0.00 0.00 6.13
1972 2254 3.975168 AAGTACTAGAACAATGCCCGT 57.025 42.857 0.00 0.00 0.00 5.28
1973 2255 3.247006 AGTACTAGAACAATGCCCGTG 57.753 47.619 0.00 0.00 0.00 4.94
1974 2256 2.565834 AGTACTAGAACAATGCCCGTGT 59.434 45.455 0.00 0.00 0.00 4.49
1975 2257 1.808411 ACTAGAACAATGCCCGTGTG 58.192 50.000 0.00 0.00 0.00 3.82
1976 2258 1.071699 ACTAGAACAATGCCCGTGTGT 59.928 47.619 0.00 0.00 0.00 3.72
1977 2259 2.151202 CTAGAACAATGCCCGTGTGTT 58.849 47.619 0.00 0.00 38.17 3.32
1978 2260 0.667993 AGAACAATGCCCGTGTGTTG 59.332 50.000 0.00 0.00 35.67 3.33
1979 2261 0.939106 GAACAATGCCCGTGTGTTGC 60.939 55.000 0.00 0.00 35.67 4.17
1980 2262 1.670949 AACAATGCCCGTGTGTTGCA 61.671 50.000 0.00 0.00 39.68 4.08
1981 2263 1.067084 CAATGCCCGTGTGTTGCAA 59.933 52.632 0.00 0.00 38.69 4.08
1982 2264 0.319727 CAATGCCCGTGTGTTGCAAT 60.320 50.000 0.59 0.00 38.69 3.56
1983 2265 0.319727 AATGCCCGTGTGTTGCAATG 60.320 50.000 0.59 0.00 38.69 2.82
1984 2266 2.734346 GCCCGTGTGTTGCAATGC 60.734 61.111 0.59 0.00 0.00 3.56
1985 2267 2.428902 CCCGTGTGTTGCAATGCG 60.429 61.111 0.59 5.22 0.00 4.73
1986 2268 2.428902 CCGTGTGTTGCAATGCGG 60.429 61.111 0.59 10.70 0.00 5.69
1987 2269 2.331098 CGTGTGTTGCAATGCGGT 59.669 55.556 0.59 0.00 0.00 5.68
1988 2270 1.571953 CGTGTGTTGCAATGCGGTA 59.428 52.632 0.59 0.00 0.00 4.02
1989 2271 0.167908 CGTGTGTTGCAATGCGGTAT 59.832 50.000 0.59 0.00 0.00 2.73
1990 2272 1.395262 CGTGTGTTGCAATGCGGTATA 59.605 47.619 0.59 0.00 0.00 1.47
1991 2273 2.159639 CGTGTGTTGCAATGCGGTATAA 60.160 45.455 0.59 0.00 0.00 0.98
1992 2274 3.668226 CGTGTGTTGCAATGCGGTATAAA 60.668 43.478 0.59 0.00 0.00 1.40
1993 2275 4.420168 GTGTGTTGCAATGCGGTATAAAT 58.580 39.130 0.59 0.00 0.00 1.40
1994 2276 5.574082 GTGTGTTGCAATGCGGTATAAATA 58.426 37.500 0.59 0.00 0.00 1.40
1995 2277 6.205784 GTGTGTTGCAATGCGGTATAAATAT 58.794 36.000 0.59 0.00 0.00 1.28
1996 2278 6.695278 GTGTGTTGCAATGCGGTATAAATATT 59.305 34.615 0.59 0.00 0.00 1.28
1997 2279 6.915300 TGTGTTGCAATGCGGTATAAATATTC 59.085 34.615 0.59 0.00 0.00 1.75
1998 2280 7.138736 GTGTTGCAATGCGGTATAAATATTCT 58.861 34.615 0.59 0.00 0.00 2.40
1999 2281 8.286800 GTGTTGCAATGCGGTATAAATATTCTA 58.713 33.333 0.59 0.00 0.00 2.10
2000 2282 8.503196 TGTTGCAATGCGGTATAAATATTCTAG 58.497 33.333 0.59 0.00 0.00 2.43
2001 2283 8.504005 GTTGCAATGCGGTATAAATATTCTAGT 58.496 33.333 0.59 0.00 0.00 2.57
2002 2284 9.713713 TTGCAATGCGGTATAAATATTCTAGTA 57.286 29.630 0.00 0.00 0.00 1.82
2003 2285 9.146984 TGCAATGCGGTATAAATATTCTAGTAC 57.853 33.333 0.00 0.00 0.00 2.73
2004 2286 8.318876 GCAATGCGGTATAAATATTCTAGTACG 58.681 37.037 0.00 0.00 0.00 3.67
2005 2287 9.350357 CAATGCGGTATAAATATTCTAGTACGT 57.650 33.333 0.00 0.00 0.00 3.57
2006 2288 9.918630 AATGCGGTATAAATATTCTAGTACGTT 57.081 29.630 0.00 0.00 0.00 3.99
2025 2307 8.724229 AGTACGTTAAATTGTGATTTACCTTCC 58.276 33.333 0.00 0.00 37.43 3.46
2026 2308 6.916440 ACGTTAAATTGTGATTTACCTTCCC 58.084 36.000 0.00 0.00 37.43 3.97
2027 2309 6.490721 ACGTTAAATTGTGATTTACCTTCCCA 59.509 34.615 0.00 0.00 37.43 4.37
2028 2310 7.177744 ACGTTAAATTGTGATTTACCTTCCCAT 59.822 33.333 0.00 0.00 37.43 4.00
2029 2311 8.679100 CGTTAAATTGTGATTTACCTTCCCATA 58.321 33.333 0.00 0.00 37.43 2.74
2035 2317 7.759489 TGTGATTTACCTTCCCATAATATGC 57.241 36.000 0.00 0.00 0.00 3.14
2036 2318 6.429692 TGTGATTTACCTTCCCATAATATGCG 59.570 38.462 0.00 0.00 0.00 4.73
2037 2319 6.653320 GTGATTTACCTTCCCATAATATGCGA 59.347 38.462 0.00 0.00 0.00 5.10
2038 2320 7.336931 GTGATTTACCTTCCCATAATATGCGAT 59.663 37.037 0.00 0.00 0.00 4.58
2039 2321 7.888021 TGATTTACCTTCCCATAATATGCGATT 59.112 33.333 0.00 0.00 0.00 3.34
2040 2322 7.447374 TTTACCTTCCCATAATATGCGATTG 57.553 36.000 0.00 0.00 0.00 2.67
2041 2323 4.985538 ACCTTCCCATAATATGCGATTGT 58.014 39.130 0.00 0.00 0.00 2.71
2042 2324 4.761739 ACCTTCCCATAATATGCGATTGTG 59.238 41.667 0.00 2.12 0.00 3.33
2043 2325 4.761739 CCTTCCCATAATATGCGATTGTGT 59.238 41.667 0.00 0.00 0.00 3.72
2044 2326 5.937540 CCTTCCCATAATATGCGATTGTGTA 59.062 40.000 0.00 0.00 0.00 2.90
2045 2327 6.429692 CCTTCCCATAATATGCGATTGTGTAA 59.570 38.462 0.00 2.18 0.00 2.41
2046 2328 7.040755 CCTTCCCATAATATGCGATTGTGTAAA 60.041 37.037 0.00 1.95 0.00 2.01
2047 2329 7.994425 TCCCATAATATGCGATTGTGTAAAT 57.006 32.000 0.00 0.00 0.00 1.40
2048 2330 9.508642 TTCCCATAATATGCGATTGTGTAAATA 57.491 29.630 0.00 0.00 0.00 1.40
2049 2331 9.508642 TCCCATAATATGCGATTGTGTAAATAA 57.491 29.630 0.00 0.00 0.00 1.40
2058 2340 8.613613 TGCGATTGTGTAAATAAATGTTCATC 57.386 30.769 0.00 0.00 0.00 2.92
2059 2341 8.239998 TGCGATTGTGTAAATAAATGTTCATCA 58.760 29.630 0.00 0.00 0.00 3.07
2060 2342 9.071221 GCGATTGTGTAAATAAATGTTCATCAA 57.929 29.630 0.00 0.00 0.00 2.57
2070 2352 9.801873 AAATAAATGTTCATCAAATTCTACCCG 57.198 29.630 0.00 0.00 0.00 5.28
2071 2353 6.834168 AAATGTTCATCAAATTCTACCCGT 57.166 33.333 0.00 0.00 0.00 5.28
2072 2354 5.818136 ATGTTCATCAAATTCTACCCGTG 57.182 39.130 0.00 0.00 0.00 4.94
2073 2355 4.900684 TGTTCATCAAATTCTACCCGTGA 58.099 39.130 0.00 0.00 0.00 4.35
2074 2356 5.496556 TGTTCATCAAATTCTACCCGTGAT 58.503 37.500 0.00 0.00 0.00 3.06
2075 2357 5.943416 TGTTCATCAAATTCTACCCGTGATT 59.057 36.000 0.00 0.00 0.00 2.57
2076 2358 6.432783 TGTTCATCAAATTCTACCCGTGATTT 59.567 34.615 0.00 0.00 0.00 2.17
2077 2359 7.608376 TGTTCATCAAATTCTACCCGTGATTTA 59.392 33.333 0.00 0.00 0.00 1.40
2078 2360 7.548196 TCATCAAATTCTACCCGTGATTTAC 57.452 36.000 0.00 0.00 0.00 2.01
2079 2361 6.540914 TCATCAAATTCTACCCGTGATTTACC 59.459 38.462 0.00 0.00 0.00 2.85
2080 2362 6.057321 TCAAATTCTACCCGTGATTTACCT 57.943 37.500 0.00 0.00 0.00 3.08
2081 2363 6.478129 TCAAATTCTACCCGTGATTTACCTT 58.522 36.000 0.00 0.00 0.00 3.50
2082 2364 7.622713 TCAAATTCTACCCGTGATTTACCTTA 58.377 34.615 0.00 0.00 0.00 2.69
2083 2365 8.269317 TCAAATTCTACCCGTGATTTACCTTAT 58.731 33.333 0.00 0.00 0.00 1.73
2084 2366 9.550406 CAAATTCTACCCGTGATTTACCTTATA 57.450 33.333 0.00 0.00 0.00 0.98
2086 2368 9.720769 AATTCTACCCGTGATTTACCTTATATG 57.279 33.333 0.00 0.00 0.00 1.78
2087 2369 7.844493 TCTACCCGTGATTTACCTTATATGT 57.156 36.000 0.00 0.00 0.00 2.29
2088 2370 8.253867 TCTACCCGTGATTTACCTTATATGTT 57.746 34.615 0.00 0.00 0.00 2.71
2089 2371 8.145767 TCTACCCGTGATTTACCTTATATGTTG 58.854 37.037 0.00 0.00 0.00 3.33
2090 2372 6.891388 ACCCGTGATTTACCTTATATGTTGA 58.109 36.000 0.00 0.00 0.00 3.18
2091 2373 7.514721 ACCCGTGATTTACCTTATATGTTGAT 58.485 34.615 0.00 0.00 0.00 2.57
2092 2374 7.660208 ACCCGTGATTTACCTTATATGTTGATC 59.340 37.037 0.00 0.00 0.00 2.92
2093 2375 7.659799 CCCGTGATTTACCTTATATGTTGATCA 59.340 37.037 0.00 0.00 0.00 2.92
2094 2376 9.219603 CCGTGATTTACCTTATATGTTGATCAT 57.780 33.333 0.00 0.00 40.25 2.45
2109 2391 7.320443 TGTTGATCATTAGTGATTTACCTGC 57.680 36.000 1.86 0.00 44.96 4.85
2110 2392 6.318648 TGTTGATCATTAGTGATTTACCTGCC 59.681 38.462 1.86 0.00 44.96 4.85
2111 2393 5.376625 TGATCATTAGTGATTTACCTGCCC 58.623 41.667 1.86 0.00 44.96 5.36
2112 2394 4.853468 TCATTAGTGATTTACCTGCCCA 57.147 40.909 0.00 0.00 0.00 5.36
2113 2395 5.387113 TCATTAGTGATTTACCTGCCCAT 57.613 39.130 0.00 0.00 0.00 4.00
2114 2396 6.508030 TCATTAGTGATTTACCTGCCCATA 57.492 37.500 0.00 0.00 0.00 2.74
2115 2397 6.905736 TCATTAGTGATTTACCTGCCCATAA 58.094 36.000 0.00 0.00 0.00 1.90
2116 2398 7.526041 TCATTAGTGATTTACCTGCCCATAAT 58.474 34.615 0.00 0.00 0.00 1.28
2117 2399 8.664992 TCATTAGTGATTTACCTGCCCATAATA 58.335 33.333 0.00 0.00 0.00 0.98
2118 2400 9.466497 CATTAGTGATTTACCTGCCCATAATAT 57.534 33.333 0.00 0.00 0.00 1.28
2119 2401 8.862325 TTAGTGATTTACCTGCCCATAATATG 57.138 34.615 0.00 0.00 0.00 1.78
2120 2402 6.852404 AGTGATTTACCTGCCCATAATATGT 58.148 36.000 0.00 0.00 0.00 2.29
2121 2403 6.716628 AGTGATTTACCTGCCCATAATATGTG 59.283 38.462 0.00 0.00 0.00 3.21
2122 2404 6.714810 GTGATTTACCTGCCCATAATATGTGA 59.285 38.462 0.00 0.00 0.00 3.58
2123 2405 7.394359 GTGATTTACCTGCCCATAATATGTGAT 59.606 37.037 0.00 0.00 0.00 3.06
2124 2406 7.949565 TGATTTACCTGCCCATAATATGTGATT 59.050 33.333 0.00 0.00 0.00 2.57
2125 2407 8.725606 ATTTACCTGCCCATAATATGTGATTT 57.274 30.769 0.00 0.00 0.00 2.17
2126 2408 8.546083 TTTACCTGCCCATAATATGTGATTTT 57.454 30.769 0.00 0.00 0.00 1.82
2127 2409 6.409524 ACCTGCCCATAATATGTGATTTTG 57.590 37.500 0.00 0.00 0.00 2.44
2128 2410 5.898972 ACCTGCCCATAATATGTGATTTTGT 59.101 36.000 0.00 0.00 0.00 2.83
2129 2411 7.066142 ACCTGCCCATAATATGTGATTTTGTA 58.934 34.615 0.00 0.00 0.00 2.41
2130 2412 7.563188 ACCTGCCCATAATATGTGATTTTGTAA 59.437 33.333 0.00 0.00 0.00 2.41
2131 2413 8.420222 CCTGCCCATAATATGTGATTTTGTAAA 58.580 33.333 0.00 0.00 0.00 2.01
2132 2414 9.985730 CTGCCCATAATATGTGATTTTGTAAAT 57.014 29.630 0.00 0.00 0.00 1.40
2154 2436 8.496707 AAATAAATGTTCATCAAATTCTGCCC 57.503 30.769 0.00 0.00 0.00 5.36
2155 2437 3.788333 ATGTTCATCAAATTCTGCCCG 57.212 42.857 0.00 0.00 0.00 6.13
2156 2438 2.513753 TGTTCATCAAATTCTGCCCGT 58.486 42.857 0.00 0.00 0.00 5.28
2157 2439 2.228582 TGTTCATCAAATTCTGCCCGTG 59.771 45.455 0.00 0.00 0.00 4.94
2158 2440 2.487762 GTTCATCAAATTCTGCCCGTGA 59.512 45.455 0.00 0.00 0.00 4.35
2159 2441 3.003394 TCATCAAATTCTGCCCGTGAT 57.997 42.857 0.00 0.00 0.00 3.06
2160 2442 3.355378 TCATCAAATTCTGCCCGTGATT 58.645 40.909 0.00 0.00 0.00 2.57
2161 2443 3.763360 TCATCAAATTCTGCCCGTGATTT 59.237 39.130 0.00 0.00 0.00 2.17
2162 2444 3.574284 TCAAATTCTGCCCGTGATTTG 57.426 42.857 0.00 0.00 0.00 2.32
2163 2445 1.994779 CAAATTCTGCCCGTGATTTGC 59.005 47.619 0.00 0.00 0.00 3.68
2164 2446 0.532115 AATTCTGCCCGTGATTTGCC 59.468 50.000 0.00 0.00 0.00 4.52
2165 2447 0.323725 ATTCTGCCCGTGATTTGCCT 60.324 50.000 0.00 0.00 0.00 4.75
2166 2448 0.539438 TTCTGCCCGTGATTTGCCTT 60.539 50.000 0.00 0.00 0.00 4.35
2167 2449 0.326595 TCTGCCCGTGATTTGCCTTA 59.673 50.000 0.00 0.00 0.00 2.69
2168 2450 0.451783 CTGCCCGTGATTTGCCTTAC 59.548 55.000 0.00 0.00 0.00 2.34
2169 2451 0.250945 TGCCCGTGATTTGCCTTACA 60.251 50.000 0.00 0.00 0.00 2.41
2170 2452 1.102978 GCCCGTGATTTGCCTTACAT 58.897 50.000 0.00 0.00 0.00 2.29
2171 2453 1.476488 GCCCGTGATTTGCCTTACATT 59.524 47.619 0.00 0.00 0.00 2.71
2172 2454 2.094234 GCCCGTGATTTGCCTTACATTT 60.094 45.455 0.00 0.00 0.00 2.32
2173 2455 3.616317 GCCCGTGATTTGCCTTACATTTT 60.616 43.478 0.00 0.00 0.00 1.82
2174 2456 3.925913 CCCGTGATTTGCCTTACATTTTG 59.074 43.478 0.00 0.00 0.00 2.44
2175 2457 4.321601 CCCGTGATTTGCCTTACATTTTGA 60.322 41.667 0.00 0.00 0.00 2.69
2176 2458 5.410067 CCGTGATTTGCCTTACATTTTGAT 58.590 37.500 0.00 0.00 0.00 2.57
2177 2459 5.868801 CCGTGATTTGCCTTACATTTTGATT 59.131 36.000 0.00 0.00 0.00 2.57
2178 2460 7.032580 CCGTGATTTGCCTTACATTTTGATTA 58.967 34.615 0.00 0.00 0.00 1.75
2179 2461 7.220683 CCGTGATTTGCCTTACATTTTGATTAG 59.779 37.037 0.00 0.00 0.00 1.73
2180 2462 7.967854 CGTGATTTGCCTTACATTTTGATTAGA 59.032 33.333 0.00 0.00 0.00 2.10
2181 2463 9.638239 GTGATTTGCCTTACATTTTGATTAGAA 57.362 29.630 0.00 0.00 0.00 2.10
2224 2506 7.891498 AGTGAAATTGGTTTACAAGGTAAGT 57.109 32.000 0.00 0.00 43.48 2.24
2225 2507 8.983702 AGTGAAATTGGTTTACAAGGTAAGTA 57.016 30.769 0.00 0.00 43.48 2.24
2226 2508 9.411189 AGTGAAATTGGTTTACAAGGTAAGTAA 57.589 29.630 0.00 0.00 43.48 2.24
2234 2516 9.865152 TGGTTTACAAGGTAAGTAAATTAAGGT 57.135 29.630 0.00 0.00 41.74 3.50
2240 2522 9.802039 ACAAGGTAAGTAAATTAAGGTGATTCA 57.198 29.630 0.00 0.00 0.00 2.57
2253 2535 9.681062 ATTAAGGTGATTCATTATTATACGGGG 57.319 33.333 0.00 0.00 0.00 5.73
2254 2536 6.945636 AGGTGATTCATTATTATACGGGGA 57.054 37.500 0.00 0.00 0.00 4.81
2255 2537 7.324388 AGGTGATTCATTATTATACGGGGAA 57.676 36.000 0.00 0.00 0.00 3.97
2256 2538 7.394816 AGGTGATTCATTATTATACGGGGAAG 58.605 38.462 0.00 0.00 0.00 3.46
2257 2539 6.598064 GGTGATTCATTATTATACGGGGAAGG 59.402 42.308 0.00 0.00 0.00 3.46
2258 2540 7.166167 GTGATTCATTATTATACGGGGAAGGT 58.834 38.462 0.00 0.00 0.00 3.50
2259 2541 7.664318 GTGATTCATTATTATACGGGGAAGGTT 59.336 37.037 0.00 0.00 0.00 3.50
2260 2542 7.663905 TGATTCATTATTATACGGGGAAGGTTG 59.336 37.037 0.00 0.00 0.00 3.77
2261 2543 5.871834 TCATTATTATACGGGGAAGGTTGG 58.128 41.667 0.00 0.00 0.00 3.77
2262 2544 5.607592 TCATTATTATACGGGGAAGGTTGGA 59.392 40.000 0.00 0.00 0.00 3.53
2263 2545 3.851458 ATTATACGGGGAAGGTTGGAC 57.149 47.619 0.00 0.00 0.00 4.02
2264 2546 1.113788 TATACGGGGAAGGTTGGACG 58.886 55.000 0.00 0.00 0.00 4.79
2265 2547 0.615544 ATACGGGGAAGGTTGGACGA 60.616 55.000 0.00 0.00 0.00 4.20
2266 2548 0.831288 TACGGGGAAGGTTGGACGAA 60.831 55.000 0.00 0.00 0.00 3.85
2267 2549 1.375523 CGGGGAAGGTTGGACGAAG 60.376 63.158 0.00 0.00 0.00 3.79
2268 2550 1.002502 GGGGAAGGTTGGACGAAGG 60.003 63.158 0.00 0.00 0.00 3.46
2269 2551 1.002502 GGGAAGGTTGGACGAAGGG 60.003 63.158 0.00 0.00 0.00 3.95
2270 2552 1.002502 GGAAGGTTGGACGAAGGGG 60.003 63.158 0.00 0.00 0.00 4.79
2271 2553 1.759236 GAAGGTTGGACGAAGGGGT 59.241 57.895 0.00 0.00 0.00 4.95
2272 2554 0.605589 GAAGGTTGGACGAAGGGGTG 60.606 60.000 0.00 0.00 0.00 4.61
2273 2555 2.033602 GGTTGGACGAAGGGGTGG 59.966 66.667 0.00 0.00 0.00 4.61
2274 2556 2.826003 GGTTGGACGAAGGGGTGGT 61.826 63.158 0.00 0.00 0.00 4.16
2275 2557 1.599797 GTTGGACGAAGGGGTGGTG 60.600 63.158 0.00 0.00 0.00 4.17
2276 2558 2.824880 TTGGACGAAGGGGTGGTGG 61.825 63.158 0.00 0.00 0.00 4.61
2277 2559 4.029809 GGACGAAGGGGTGGTGGG 62.030 72.222 0.00 0.00 0.00 4.61
2278 2560 2.926242 GACGAAGGGGTGGTGGGA 60.926 66.667 0.00 0.00 0.00 4.37
2279 2561 2.448931 ACGAAGGGGTGGTGGGAA 60.449 61.111 0.00 0.00 0.00 3.97
2280 2562 2.351276 CGAAGGGGTGGTGGGAAG 59.649 66.667 0.00 0.00 0.00 3.46
2281 2563 2.221299 CGAAGGGGTGGTGGGAAGA 61.221 63.158 0.00 0.00 0.00 2.87
2282 2564 1.774894 CGAAGGGGTGGTGGGAAGAA 61.775 60.000 0.00 0.00 0.00 2.52
2283 2565 0.481128 GAAGGGGTGGTGGGAAGAAA 59.519 55.000 0.00 0.00 0.00 2.52
2284 2566 0.938192 AAGGGGTGGTGGGAAGAAAA 59.062 50.000 0.00 0.00 0.00 2.29
2575 2984 5.948588 TCAACAAATATTGATTCACACCCG 58.051 37.500 0.00 0.00 33.62 5.28
2758 3169 7.493320 GGTGCATGACATGTTGATTAAATTCAT 59.507 33.333 16.62 0.00 0.00 2.57
2973 3384 8.135529 GGTATGACTTACTTGCTTTTGACTTTT 58.864 33.333 0.00 0.00 0.00 2.27
3668 4101 0.861837 CGTGCTGTGTTCTCTGGTTC 59.138 55.000 0.00 0.00 0.00 3.62
3766 4199 3.717294 GGGCGGGTCACATGTCCT 61.717 66.667 0.00 0.00 0.00 3.85
3779 4212 4.122776 CACATGTCCTACTCAGCATAACC 58.877 47.826 0.00 0.00 0.00 2.85
3908 4341 7.667575 AGCTACATAGTAATGATCTATGGGG 57.332 40.000 14.56 9.12 45.03 4.96
3909 4342 6.613271 AGCTACATAGTAATGATCTATGGGGG 59.387 42.308 14.56 7.38 45.03 5.40
3948 4381 2.122783 TGGGTTACTGCTTATGCACC 57.877 50.000 0.00 0.00 45.31 5.01
3957 4390 0.447801 GCTTATGCACCGGTTCAGTG 59.552 55.000 13.53 6.33 39.41 3.66
3962 4395 2.034066 CACCGGTTCAGTGCCCAT 59.966 61.111 2.97 0.00 0.00 4.00
3974 4407 1.901833 AGTGCCCATGGACATTTTTCC 59.098 47.619 15.22 0.00 36.03 3.13
4232 4670 6.216801 TGAACCGATGCAAGTAGTAGTAAT 57.783 37.500 0.00 0.00 0.00 1.89
4271 4709 1.300697 GACGAGCGGGAACTTGTGT 60.301 57.895 0.00 0.00 34.29 3.72
4280 4718 1.103398 GGAACTTGTGTGTGCAGCCT 61.103 55.000 0.00 0.00 0.00 4.58
4285 4723 1.002468 CTTGTGTGTGCAGCCTGTAAC 60.002 52.381 0.00 0.00 0.00 2.50
4415 4854 6.354130 ACCATATCTGCCACGTATTTTTACT 58.646 36.000 0.00 0.00 0.00 2.24
4466 4909 2.201708 TCCGTGTGTACTGGCCGAA 61.202 57.895 0.00 0.00 0.00 4.30
4650 5105 5.949354 TGGTGATATCCTTAACCCAAGTTTG 59.051 40.000 7.33 0.00 37.42 2.93
4652 5107 6.436218 GGTGATATCCTTAACCCAAGTTTGTT 59.564 38.462 0.00 0.00 37.42 2.83
4725 5180 7.855904 GGTATGTCATTCCGCTAAAATTTGTAG 59.144 37.037 0.00 0.00 0.00 2.74
4756 5211 8.607459 CAATAGCCTTAACAGTTAGAATGAGTG 58.393 37.037 0.00 0.00 0.00 3.51
4808 5263 7.981102 GGTTTAAGAGAACCTATGACAAACT 57.019 36.000 0.00 0.00 44.55 2.66
4810 5265 9.668497 GGTTTAAGAGAACCTATGACAAACTAT 57.332 33.333 0.00 0.00 44.55 2.12
4815 5270 8.950208 AGAGAACCTATGACAAACTATAAAGC 57.050 34.615 0.00 0.00 0.00 3.51
4816 5271 8.540388 AGAGAACCTATGACAAACTATAAAGCA 58.460 33.333 0.00 0.00 0.00 3.91
4817 5272 9.162764 GAGAACCTATGACAAACTATAAAGCAA 57.837 33.333 0.00 0.00 0.00 3.91
4818 5273 9.515226 AGAACCTATGACAAACTATAAAGCAAA 57.485 29.630 0.00 0.00 0.00 3.68
5207 5830 8.793592 AGGAATTTGAAAAACTGTATCAGGTAC 58.206 33.333 1.90 0.00 35.51 3.34
5235 5858 6.054860 ACAGCATATAACCACTTCTCTGTT 57.945 37.500 0.00 0.00 0.00 3.16
5247 5870 4.466370 CACTTCTCTGTTATCTGTACCCCA 59.534 45.833 0.00 0.00 0.00 4.96
5270 5895 7.414762 CCCATTGGTCCTAAACAATTAGTAACG 60.415 40.741 1.20 0.00 37.42 3.18
5370 5995 5.885465 ACCAGAATCTCCTGAAAGATTTGT 58.115 37.500 1.05 0.00 44.16 2.83
5405 6030 3.812053 GCTCACGATATCTTTGAATGGCT 59.188 43.478 0.34 0.00 0.00 4.75
5620 6260 6.709643 CGCTTCAAGACAAGGTAAATATGAG 58.290 40.000 0.00 0.00 0.00 2.90
5710 6350 3.445805 TCTGTTATACGCATCACTGACCA 59.554 43.478 0.00 0.00 0.00 4.02
5736 6376 8.468720 TGTGCTGATCAAATATTGACATTTTG 57.531 30.769 0.00 0.00 43.48 2.44
5750 6390 6.185114 TGACATTTTGTGGGGAATCAAATT 57.815 33.333 0.00 0.00 34.30 1.82
5842 6482 5.630069 GCAGACTTCCTCATAAGAATTGGGA 60.630 44.000 0.00 0.00 0.00 4.37
6001 6642 3.166679 GGTGCCAGGTTAATAAAACCCA 58.833 45.455 3.33 0.00 41.18 4.51
6294 7017 3.119388 ACCAGCATGTGCAATGACATTAC 60.119 43.478 7.83 0.00 45.16 1.89
6554 7277 6.488769 AATCCCATAACACGGTATTAGACA 57.511 37.500 0.00 0.00 0.00 3.41
6838 7781 2.588877 CCATGCGCGGTAGGGAAG 60.589 66.667 8.83 0.00 0.00 3.46
6839 7782 3.272334 CATGCGCGGTAGGGAAGC 61.272 66.667 8.83 0.00 0.00 3.86
6840 7783 3.470888 ATGCGCGGTAGGGAAGCT 61.471 61.111 8.83 0.00 0.00 3.74
6841 7784 2.131709 ATGCGCGGTAGGGAAGCTA 61.132 57.895 8.83 0.00 0.00 3.32
6842 7785 2.279318 GCGCGGTAGGGAAGCTAC 60.279 66.667 8.83 0.00 0.00 3.58
6843 7786 3.072486 GCGCGGTAGGGAAGCTACA 62.072 63.158 8.83 0.00 0.00 2.74
6844 7787 1.065928 CGCGGTAGGGAAGCTACAG 59.934 63.158 0.00 0.00 0.00 2.74
6845 7788 1.664321 CGCGGTAGGGAAGCTACAGT 61.664 60.000 0.00 0.00 0.00 3.55
6879 7870 0.615850 CCCTGTGTCCCTTCCTTCTC 59.384 60.000 0.00 0.00 0.00 2.87
6880 7871 0.247736 CCTGTGTCCCTTCCTTCTCG 59.752 60.000 0.00 0.00 0.00 4.04
6881 7872 0.247736 CTGTGTCCCTTCCTTCTCGG 59.752 60.000 0.00 0.00 0.00 4.63
6882 7873 1.079057 GTGTCCCTTCCTTCTCGGC 60.079 63.158 0.00 0.00 0.00 5.54
6883 7874 1.229209 TGTCCCTTCCTTCTCGGCT 60.229 57.895 0.00 0.00 0.00 5.52
6884 7875 0.836400 TGTCCCTTCCTTCTCGGCTT 60.836 55.000 0.00 0.00 0.00 4.35
6885 7876 0.391793 GTCCCTTCCTTCTCGGCTTG 60.392 60.000 0.00 0.00 0.00 4.01
6886 7877 1.078143 CCCTTCCTTCTCGGCTTGG 60.078 63.158 0.00 0.00 0.00 3.61
6887 7878 1.553690 CCCTTCCTTCTCGGCTTGGA 61.554 60.000 0.00 0.00 0.00 3.53
6888 7879 0.391793 CCTTCCTTCTCGGCTTGGAC 60.392 60.000 0.00 0.00 0.00 4.02
6889 7880 0.391793 CTTCCTTCTCGGCTTGGACC 60.392 60.000 0.00 0.00 0.00 4.46
6890 7881 0.836400 TTCCTTCTCGGCTTGGACCT 60.836 55.000 0.00 0.00 0.00 3.85
6891 7882 1.078848 CCTTCTCGGCTTGGACCTG 60.079 63.158 0.00 0.00 0.00 4.00
6892 7883 1.078848 CTTCTCGGCTTGGACCTGG 60.079 63.158 0.00 0.00 0.00 4.45
6893 7884 1.535444 TTCTCGGCTTGGACCTGGA 60.535 57.895 0.00 0.00 0.00 3.86
6894 7885 1.827399 TTCTCGGCTTGGACCTGGAC 61.827 60.000 0.00 0.00 0.00 4.02
6895 7886 2.525629 TCGGCTTGGACCTGGACA 60.526 61.111 0.00 0.00 0.00 4.02
6896 7887 2.358737 CGGCTTGGACCTGGACAC 60.359 66.667 0.00 0.00 0.00 3.67
6897 7888 2.034221 GGCTTGGACCTGGACACC 59.966 66.667 0.00 1.41 0.00 4.16
6898 7889 2.829384 GGCTTGGACCTGGACACCA 61.829 63.158 0.00 4.28 0.00 4.17
6899 7890 1.380302 GCTTGGACCTGGACACCAT 59.620 57.895 0.00 0.00 33.56 3.55
6900 7891 0.962356 GCTTGGACCTGGACACCATG 60.962 60.000 0.00 10.11 33.56 3.66
6901 7892 0.962356 CTTGGACCTGGACACCATGC 60.962 60.000 0.00 0.00 33.56 4.06
6902 7893 1.426251 TTGGACCTGGACACCATGCT 61.426 55.000 0.00 0.00 33.56 3.79
6903 7894 1.380302 GGACCTGGACACCATGCTT 59.620 57.895 0.00 0.00 30.82 3.91
6904 7895 0.678048 GGACCTGGACACCATGCTTC 60.678 60.000 0.00 0.00 30.82 3.86
6905 7896 0.678048 GACCTGGACACCATGCTTCC 60.678 60.000 0.00 0.00 30.82 3.46
6906 7897 1.379916 CCTGGACACCATGCTTCCA 59.620 57.895 7.67 7.67 37.07 3.53
6908 7899 1.303561 TGGACACCATGCTTCCAGC 60.304 57.895 4.49 0.00 42.82 4.85
6909 7900 1.001641 GGACACCATGCTTCCAGCT 60.002 57.895 0.00 0.00 42.97 4.24
6910 7901 1.310933 GGACACCATGCTTCCAGCTG 61.311 60.000 6.78 6.78 42.97 4.24
6911 7902 1.303888 ACACCATGCTTCCAGCTGG 60.304 57.895 27.87 27.87 42.97 4.85
6912 7903 1.303888 CACCATGCTTCCAGCTGGT 60.304 57.895 31.58 10.06 46.32 4.00
6913 7904 1.303888 ACCATGCTTCCAGCTGGTG 60.304 57.895 31.58 24.58 44.87 4.17
6914 7905 2.776370 ACCATGCTTCCAGCTGGTGG 62.776 60.000 31.58 30.09 44.87 4.61
6921 7912 4.278956 CCAGCTGGTGGTTACGTC 57.721 61.111 25.53 0.00 42.17 4.34
6922 7913 1.736645 CCAGCTGGTGGTTACGTCG 60.737 63.158 25.53 0.00 42.17 5.12
6923 7914 1.006571 CAGCTGGTGGTTACGTCGT 60.007 57.895 5.57 2.21 0.00 4.34
6924 7915 1.007336 CAGCTGGTGGTTACGTCGTC 61.007 60.000 5.57 0.00 0.00 4.20
6925 7916 1.735559 GCTGGTGGTTACGTCGTCC 60.736 63.158 0.00 0.00 0.00 4.79
6926 7917 1.962144 CTGGTGGTTACGTCGTCCT 59.038 57.895 0.00 0.00 0.00 3.85
6949 7940 4.891168 TCGGCTGATACATACCAAACTCTA 59.109 41.667 0.00 0.00 0.00 2.43
7007 7998 6.610830 ACAAAATATGATCTTTGCCCATACCA 59.389 34.615 5.35 0.00 36.24 3.25
7017 8008 5.587043 TCTTTGCCCATACCATTTACGTTAG 59.413 40.000 0.00 0.00 0.00 2.34
7109 8104 0.034616 ACCTGCAGCACTCTCTGTTC 59.965 55.000 8.66 0.00 36.49 3.18
7308 8306 4.453480 ACCTTGGAAATGAAACAGAGGA 57.547 40.909 0.00 0.00 0.00 3.71
7408 8406 2.552031 CTGATGACAGCTGATCCACTG 58.448 52.381 23.35 9.83 37.33 3.66
7469 8467 7.921214 TCATAGTGACGAATAGTTCCTTCATTC 59.079 37.037 0.00 0.00 0.00 2.67
7470 8468 5.420409 AGTGACGAATAGTTCCTTCATTCC 58.580 41.667 0.00 0.00 0.00 3.01
7472 8470 4.158949 TGACGAATAGTTCCTTCATTCCGA 59.841 41.667 0.00 0.00 0.00 4.55
7473 8471 5.080969 ACGAATAGTTCCTTCATTCCGAA 57.919 39.130 0.00 0.00 0.00 4.30
7484 8482 4.701956 TTCATTCCGAAGAAGAAATGGC 57.298 40.909 0.00 0.00 34.86 4.40
7485 8483 3.955471 TCATTCCGAAGAAGAAATGGCT 58.045 40.909 0.00 0.00 34.86 4.75
7486 8484 5.097742 TCATTCCGAAGAAGAAATGGCTA 57.902 39.130 0.00 0.00 34.86 3.93
7488 8486 5.528690 TCATTCCGAAGAAGAAATGGCTATG 59.471 40.000 0.00 0.00 34.86 2.23
7489 8487 3.206150 TCCGAAGAAGAAATGGCTATGC 58.794 45.455 0.00 0.00 0.00 3.14
7502 8500 3.888583 TGGCTATGCATCTTGTGAATGA 58.111 40.909 0.19 0.00 0.00 2.57
7579 8739 9.994432 CACAAGAATGACCATAGAATTTTACTC 57.006 33.333 0.00 0.00 0.00 2.59
7580 8740 8.883731 ACAAGAATGACCATAGAATTTTACTCG 58.116 33.333 0.00 0.00 0.00 4.18
7587 8747 8.932791 TGACCATAGAATTTTACTCGACTTTTC 58.067 33.333 0.00 0.00 0.00 2.29
7592 8752 0.785979 TTTACTCGACTTTTCGCGCC 59.214 50.000 0.00 0.00 45.46 6.53
7612 8772 0.315869 GAACGCACGGACAGTTTGTG 60.316 55.000 0.00 2.51 36.70 3.33
7619 8779 3.744426 GCACGGACAGTTTGTGTAACTAT 59.256 43.478 7.66 0.00 45.29 2.12
7657 8817 8.915654 CAGTGGAGCTATTTTATTTTGTTTGTC 58.084 33.333 0.00 0.00 0.00 3.18
7672 8832 8.659925 TTTTGTTTGTCAGATGCATGTATTTT 57.340 26.923 2.46 0.00 0.00 1.82
7673 8833 8.659925 TTTGTTTGTCAGATGCATGTATTTTT 57.340 26.923 2.46 0.00 0.00 1.94
7721 8881 5.587844 CAGCTCTGGTTATTCATTAAGCTGT 59.412 40.000 11.76 0.00 40.49 4.40
7739 8899 0.320421 GTAGAGAAGTGCCGCCACAA 60.320 55.000 0.00 0.00 44.53 3.33
7755 8915 3.002759 GCCACAAGACACAGAAAGAAGTC 59.997 47.826 0.00 0.00 0.00 3.01
7756 8916 4.191544 CCACAAGACACAGAAAGAAGTCA 58.808 43.478 0.00 0.00 33.56 3.41
7757 8917 4.635765 CCACAAGACACAGAAAGAAGTCAA 59.364 41.667 0.00 0.00 33.56 3.18
7758 8918 5.447818 CCACAAGACACAGAAAGAAGTCAAC 60.448 44.000 0.00 0.00 33.56 3.18
7759 8919 5.122239 CACAAGACACAGAAAGAAGTCAACA 59.878 40.000 0.00 0.00 33.56 3.33
7760 8920 5.122396 ACAAGACACAGAAAGAAGTCAACAC 59.878 40.000 0.00 0.00 33.56 3.32
7765 8925 3.374058 ACAGAAAGAAGTCAACACAACCG 59.626 43.478 0.00 0.00 0.00 4.44
7808 8969 0.901580 ACATTGCCCCCTGAGCTTTG 60.902 55.000 0.00 0.00 0.00 2.77
7813 8974 1.536073 GCCCCCTGAGCTTTGAAACC 61.536 60.000 0.00 0.00 0.00 3.27
7825 10639 4.105486 GCTTTGAAACCGGCTATTTCATC 58.895 43.478 16.74 8.02 43.65 2.92
7840 10654 0.329261 TCATCCCCTGGAGTTTGCAG 59.671 55.000 0.00 0.00 34.05 4.41
7858 10672 3.263170 TGCAGAACTAGATAAAGCACCCA 59.737 43.478 0.00 0.00 0.00 4.51
7862 10676 3.914426 ACTAGATAAAGCACCCACTGG 57.086 47.619 0.00 0.00 37.80 4.00
7889 10703 1.018148 GATCTGCTCCGACGAAGAGA 58.982 55.000 0.00 0.00 32.86 3.10
7894 10708 0.806241 GCTCCGACGAAGAGAGAAGT 59.194 55.000 0.00 0.00 32.86 3.01
7917 10731 3.057548 CAGCCTTGCGTGCATGGA 61.058 61.111 25.73 0.81 41.96 3.41
7924 10749 0.243365 TTGCGTGCATGGAAATGACC 59.757 50.000 10.76 0.00 0.00 4.02
7930 10755 2.756760 GTGCATGGAAATGACCATCACT 59.243 45.455 3.24 0.00 46.24 3.41
7931 10756 2.756207 TGCATGGAAATGACCATCACTG 59.244 45.455 0.00 0.00 46.24 3.66
7932 10757 2.100252 GCATGGAAATGACCATCACTGG 59.900 50.000 0.00 0.00 46.24 4.00
7933 10758 3.623703 CATGGAAATGACCATCACTGGA 58.376 45.455 0.00 0.00 46.24 3.86
7934 10759 3.071874 TGGAAATGACCATCACTGGAC 57.928 47.619 0.00 0.00 46.37 4.02
7935 10760 2.644299 TGGAAATGACCATCACTGGACT 59.356 45.455 0.00 0.00 46.37 3.85
7936 10761 3.843619 TGGAAATGACCATCACTGGACTA 59.156 43.478 0.00 0.00 46.37 2.59
7937 10762 4.474651 TGGAAATGACCATCACTGGACTAT 59.525 41.667 0.00 0.00 46.37 2.12
7938 10763 4.818546 GGAAATGACCATCACTGGACTATG 59.181 45.833 0.00 0.00 46.37 2.23
7939 10764 5.396772 GGAAATGACCATCACTGGACTATGA 60.397 44.000 0.00 0.00 46.37 2.15
7940 10765 4.679373 ATGACCATCACTGGACTATGAC 57.321 45.455 0.00 0.00 46.37 3.06
7944 10769 5.660864 TGACCATCACTGGACTATGACATTA 59.339 40.000 0.00 0.00 46.37 1.90
7966 10791 2.743928 CCACCCAGCGAGCAAGAC 60.744 66.667 0.00 0.00 0.00 3.01
7981 10806 1.678598 AAGACCGACGACACCCACAA 61.679 55.000 0.00 0.00 0.00 3.33
7984 10809 1.521906 CCGACGACACCCACAAACA 60.522 57.895 0.00 0.00 0.00 2.83
8113 10950 7.924412 GGAATACATTACATCAGGAACTCGTTA 59.076 37.037 0.00 0.00 34.60 3.18
8246 11084 4.101114 TCCAAGGACCAAGTGCTTAGATA 58.899 43.478 0.98 0.00 42.02 1.98
8250 11088 7.054124 CCAAGGACCAAGTGCTTAGATAAATA 58.946 38.462 0.98 0.00 42.02 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.072211 AGTCACAGTTATCACGAGTCGA 58.928 45.455 21.50 0.00 0.00 4.20
24 25 6.534079 GGTACCATACAAGTCACAGTTATCAC 59.466 42.308 7.15 0.00 0.00 3.06
83 84 5.087323 GGAGTGACCCTGATCCTATAATCA 58.913 45.833 0.00 0.00 34.55 2.57
203 204 0.528924 TCCTAGTGTGCGCGTATGTT 59.471 50.000 8.43 0.00 0.00 2.71
225 226 1.839994 TGGCTCCTCTAGTGGATTTGG 59.160 52.381 13.80 4.00 35.30 3.28
252 253 0.249398 GTCCTACCACACTCGCCAAT 59.751 55.000 0.00 0.00 0.00 3.16
261 262 0.700564 ACTAGACCCGTCCTACCACA 59.299 55.000 0.00 0.00 0.00 4.17
267 268 0.251077 ACACGAACTAGACCCGTCCT 60.251 55.000 0.00 0.00 33.96 3.85
294 295 1.354040 CCAGCAAACAACAAACGCAA 58.646 45.000 0.00 0.00 0.00 4.85
296 297 0.805711 AGCCAGCAAACAACAAACGC 60.806 50.000 0.00 0.00 0.00 4.84
297 298 0.922717 CAGCCAGCAAACAACAAACG 59.077 50.000 0.00 0.00 0.00 3.60
337 341 4.538746 ACCGGAAAGAACAAACCAAAAA 57.461 36.364 9.46 0.00 0.00 1.94
338 342 4.538746 AACCGGAAAGAACAAACCAAAA 57.461 36.364 9.46 0.00 0.00 2.44
339 343 4.021368 TGAAACCGGAAAGAACAAACCAAA 60.021 37.500 9.46 0.00 0.00 3.28
340 344 3.510360 TGAAACCGGAAAGAACAAACCAA 59.490 39.130 9.46 0.00 0.00 3.67
341 345 3.090037 TGAAACCGGAAAGAACAAACCA 58.910 40.909 9.46 0.00 0.00 3.67
342 346 3.786516 TGAAACCGGAAAGAACAAACC 57.213 42.857 9.46 0.00 0.00 3.27
343 347 7.940178 AAATATGAAACCGGAAAGAACAAAC 57.060 32.000 9.46 0.00 0.00 2.93
344 348 8.950208 AAAAATATGAAACCGGAAAGAACAAA 57.050 26.923 9.46 0.00 0.00 2.83
739 755 2.949447 CTACATTCCTGGGAAATGGGG 58.051 52.381 6.14 2.29 37.69 4.96
757 773 2.357637 GGCCAATAAACAGATTGCGCTA 59.642 45.455 9.73 0.00 35.79 4.26
805 821 0.248289 GTGGGCCTTAGTTCGTAGCA 59.752 55.000 4.53 0.00 0.00 3.49
827 843 1.068541 GCCTCAGTTTTTGTTAGGGCG 60.069 52.381 0.00 0.00 0.00 6.13
856 872 1.915489 ACTGACACATGGGGCTCATTA 59.085 47.619 0.48 0.00 32.92 1.90
862 878 1.377725 CCTCACTGACACATGGGGC 60.378 63.158 0.00 0.00 27.07 5.80
889 905 4.794648 TGCGGGTGGTGCCTATGC 62.795 66.667 0.00 0.00 37.43 3.14
1054 1070 1.286248 AGATTAGGGGAAAGCACCGT 58.714 50.000 0.00 0.00 44.66 4.83
1396 1412 1.227999 CGTGCCAGACCGTGACATTT 61.228 55.000 0.00 0.00 0.00 2.32
1468 1484 4.929808 AGTTCTAGTAGCACGAACCAATTG 59.070 41.667 0.00 0.00 38.17 2.32
1555 1571 4.824479 TCATATGAAGTGTTCAGCCTCA 57.176 40.909 1.98 0.00 43.98 3.86
1760 2042 7.486407 AACAATAAGATGGCAATTTTCCTCT 57.514 32.000 0.00 0.00 0.00 3.69
1793 2075 6.178239 AGTAATATTCTTTGGCACGTCAAC 57.822 37.500 0.00 0.00 0.00 3.18
1843 2125 5.509670 CCCTTCTCCTGTTTGATTTTGTTCC 60.510 44.000 0.00 0.00 0.00 3.62
1874 2156 5.477291 CGTCCAACCTCACTATATATGGTCT 59.523 44.000 0.00 0.00 0.00 3.85
1944 2226 8.789762 GGGCATTGTTCTAGTACTTTAAAAAGA 58.210 33.333 0.00 0.00 39.31 2.52
1945 2227 7.749126 CGGGCATTGTTCTAGTACTTTAAAAAG 59.251 37.037 0.00 0.90 41.73 2.27
1946 2228 7.229106 ACGGGCATTGTTCTAGTACTTTAAAAA 59.771 33.333 0.00 0.00 0.00 1.94
1947 2229 6.711645 ACGGGCATTGTTCTAGTACTTTAAAA 59.288 34.615 0.00 0.00 0.00 1.52
1948 2230 6.148150 CACGGGCATTGTTCTAGTACTTTAAA 59.852 38.462 0.00 0.00 0.00 1.52
1949 2231 5.640357 CACGGGCATTGTTCTAGTACTTTAA 59.360 40.000 0.00 0.00 0.00 1.52
1950 2232 5.172934 CACGGGCATTGTTCTAGTACTTTA 58.827 41.667 0.00 0.00 0.00 1.85
1951 2233 4.000988 CACGGGCATTGTTCTAGTACTTT 58.999 43.478 0.00 0.00 0.00 2.66
1952 2234 3.007614 ACACGGGCATTGTTCTAGTACTT 59.992 43.478 0.00 0.00 0.00 2.24
1953 2235 2.565834 ACACGGGCATTGTTCTAGTACT 59.434 45.455 0.00 0.00 0.00 2.73
1954 2236 2.671396 CACACGGGCATTGTTCTAGTAC 59.329 50.000 0.00 0.00 0.00 2.73
1955 2237 2.300723 ACACACGGGCATTGTTCTAGTA 59.699 45.455 0.00 0.00 0.00 1.82
1956 2238 1.071699 ACACACGGGCATTGTTCTAGT 59.928 47.619 0.00 0.00 0.00 2.57
1957 2239 1.808411 ACACACGGGCATTGTTCTAG 58.192 50.000 0.00 0.00 0.00 2.43
1958 2240 1.876799 CAACACACGGGCATTGTTCTA 59.123 47.619 0.00 0.00 30.98 2.10
1959 2241 0.667993 CAACACACGGGCATTGTTCT 59.332 50.000 0.00 0.00 30.98 3.01
1960 2242 0.939106 GCAACACACGGGCATTGTTC 60.939 55.000 3.68 0.00 30.98 3.18
1961 2243 1.067250 GCAACACACGGGCATTGTT 59.933 52.632 3.68 0.00 33.69 2.83
1962 2244 1.670949 TTGCAACACACGGGCATTGT 61.671 50.000 0.00 0.00 37.39 2.71
1963 2245 0.319727 ATTGCAACACACGGGCATTG 60.320 50.000 0.00 0.00 37.39 2.82
1964 2246 0.319727 CATTGCAACACACGGGCATT 60.320 50.000 0.00 0.00 37.39 3.56
1965 2247 1.289694 CATTGCAACACACGGGCAT 59.710 52.632 0.00 0.00 37.39 4.40
1966 2248 2.726909 CATTGCAACACACGGGCA 59.273 55.556 0.00 0.00 35.41 5.36
1967 2249 2.734346 GCATTGCAACACACGGGC 60.734 61.111 0.00 0.00 0.00 6.13
1968 2250 2.428902 CGCATTGCAACACACGGG 60.429 61.111 0.00 0.00 0.00 5.28
1969 2251 1.846849 TACCGCATTGCAACACACGG 61.847 55.000 22.39 22.39 45.86 4.94
1970 2252 0.167908 ATACCGCATTGCAACACACG 59.832 50.000 0.00 3.10 0.00 4.49
1971 2253 3.479505 TTATACCGCATTGCAACACAC 57.520 42.857 0.00 0.00 0.00 3.82
1972 2254 4.710423 ATTTATACCGCATTGCAACACA 57.290 36.364 0.00 0.00 0.00 3.72
1973 2255 7.138736 AGAATATTTATACCGCATTGCAACAC 58.861 34.615 0.00 0.00 0.00 3.32
1974 2256 7.270757 AGAATATTTATACCGCATTGCAACA 57.729 32.000 0.00 0.00 0.00 3.33
1975 2257 8.504005 ACTAGAATATTTATACCGCATTGCAAC 58.496 33.333 0.00 0.00 0.00 4.17
1976 2258 8.615878 ACTAGAATATTTATACCGCATTGCAA 57.384 30.769 9.69 0.00 0.00 4.08
1977 2259 9.146984 GTACTAGAATATTTATACCGCATTGCA 57.853 33.333 9.69 0.00 0.00 4.08
1978 2260 8.318876 CGTACTAGAATATTTATACCGCATTGC 58.681 37.037 0.00 0.00 0.00 3.56
1979 2261 9.350357 ACGTACTAGAATATTTATACCGCATTG 57.650 33.333 0.00 0.00 0.00 2.82
1980 2262 9.918630 AACGTACTAGAATATTTATACCGCATT 57.081 29.630 0.00 0.00 0.00 3.56
1999 2281 8.724229 GGAAGGTAAATCACAATTTAACGTACT 58.276 33.333 0.00 0.00 45.72 2.73
2000 2282 7.964559 GGGAAGGTAAATCACAATTTAACGTAC 59.035 37.037 0.00 0.00 45.72 3.67
2001 2283 7.664731 TGGGAAGGTAAATCACAATTTAACGTA 59.335 33.333 0.00 0.00 45.72 3.57
2002 2284 6.490721 TGGGAAGGTAAATCACAATTTAACGT 59.509 34.615 1.47 0.00 45.72 3.99
2003 2285 6.915349 TGGGAAGGTAAATCACAATTTAACG 58.085 36.000 1.47 0.00 45.72 3.18
2009 2291 8.806146 GCATATTATGGGAAGGTAAATCACAAT 58.194 33.333 5.84 0.00 33.14 2.71
2010 2292 7.040755 CGCATATTATGGGAAGGTAAATCACAA 60.041 37.037 13.89 0.00 45.09 3.33
2011 2293 6.429692 CGCATATTATGGGAAGGTAAATCACA 59.570 38.462 13.89 0.00 45.09 3.58
2012 2294 6.842163 CGCATATTATGGGAAGGTAAATCAC 58.158 40.000 13.89 0.00 45.09 3.06
2032 2314 9.236691 GATGAACATTTATTTACACAATCGCAT 57.763 29.630 0.00 0.00 0.00 4.73
2033 2315 8.239998 TGATGAACATTTATTTACACAATCGCA 58.760 29.630 0.00 0.00 0.00 5.10
2034 2316 8.613613 TGATGAACATTTATTTACACAATCGC 57.386 30.769 0.00 0.00 0.00 4.58
2044 2326 9.801873 CGGGTAGAATTTGATGAACATTTATTT 57.198 29.630 0.00 0.00 0.00 1.40
2045 2327 8.966868 ACGGGTAGAATTTGATGAACATTTATT 58.033 29.630 0.00 0.00 0.00 1.40
2046 2328 8.405531 CACGGGTAGAATTTGATGAACATTTAT 58.594 33.333 0.00 0.00 0.00 1.40
2047 2329 7.608376 TCACGGGTAGAATTTGATGAACATTTA 59.392 33.333 0.00 0.00 0.00 1.40
2048 2330 6.432783 TCACGGGTAGAATTTGATGAACATTT 59.567 34.615 0.00 0.00 0.00 2.32
2049 2331 5.943416 TCACGGGTAGAATTTGATGAACATT 59.057 36.000 0.00 0.00 0.00 2.71
2050 2332 5.496556 TCACGGGTAGAATTTGATGAACAT 58.503 37.500 0.00 0.00 0.00 2.71
2051 2333 4.900684 TCACGGGTAGAATTTGATGAACA 58.099 39.130 0.00 0.00 0.00 3.18
2052 2334 6.436843 AATCACGGGTAGAATTTGATGAAC 57.563 37.500 0.00 0.00 0.00 3.18
2053 2335 7.066525 GGTAAATCACGGGTAGAATTTGATGAA 59.933 37.037 0.00 0.00 0.00 2.57
2054 2336 6.540914 GGTAAATCACGGGTAGAATTTGATGA 59.459 38.462 0.00 0.00 0.00 2.92
2055 2337 6.542370 AGGTAAATCACGGGTAGAATTTGATG 59.458 38.462 0.00 0.00 0.00 3.07
2056 2338 6.659824 AGGTAAATCACGGGTAGAATTTGAT 58.340 36.000 0.00 0.00 0.00 2.57
2057 2339 6.057321 AGGTAAATCACGGGTAGAATTTGA 57.943 37.500 0.00 0.00 0.00 2.69
2058 2340 6.753107 AAGGTAAATCACGGGTAGAATTTG 57.247 37.500 0.00 0.00 0.00 2.32
2060 2342 9.720769 CATATAAGGTAAATCACGGGTAGAATT 57.279 33.333 0.00 0.00 0.00 2.17
2061 2343 8.877195 ACATATAAGGTAAATCACGGGTAGAAT 58.123 33.333 0.00 0.00 0.00 2.40
2062 2344 8.253867 ACATATAAGGTAAATCACGGGTAGAA 57.746 34.615 0.00 0.00 0.00 2.10
2063 2345 7.844493 ACATATAAGGTAAATCACGGGTAGA 57.156 36.000 0.00 0.00 0.00 2.59
2064 2346 8.145767 TCAACATATAAGGTAAATCACGGGTAG 58.854 37.037 0.00 0.00 0.00 3.18
2065 2347 8.020777 TCAACATATAAGGTAAATCACGGGTA 57.979 34.615 0.00 0.00 0.00 3.69
2066 2348 6.891388 TCAACATATAAGGTAAATCACGGGT 58.109 36.000 0.00 0.00 0.00 5.28
2067 2349 7.659799 TGATCAACATATAAGGTAAATCACGGG 59.340 37.037 0.00 0.00 0.00 5.28
2068 2350 8.601845 TGATCAACATATAAGGTAAATCACGG 57.398 34.615 0.00 0.00 0.00 4.94
2083 2365 9.056005 GCAGGTAAATCACTAATGATCAACATA 57.944 33.333 0.00 0.00 45.26 2.29
2084 2366 7.013655 GGCAGGTAAATCACTAATGATCAACAT 59.986 37.037 0.00 0.00 45.26 2.71
2085 2367 6.318648 GGCAGGTAAATCACTAATGATCAACA 59.681 38.462 0.00 0.00 45.26 3.33
2086 2368 6.238759 GGGCAGGTAAATCACTAATGATCAAC 60.239 42.308 0.00 0.00 45.26 3.18
2087 2369 5.827797 GGGCAGGTAAATCACTAATGATCAA 59.172 40.000 0.00 0.00 45.26 2.57
2088 2370 5.104151 TGGGCAGGTAAATCACTAATGATCA 60.104 40.000 0.00 0.00 45.26 2.92
2089 2371 5.376625 TGGGCAGGTAAATCACTAATGATC 58.623 41.667 0.00 0.00 45.26 2.92
2091 2373 4.853468 TGGGCAGGTAAATCACTAATGA 57.147 40.909 0.00 0.00 39.83 2.57
2092 2374 7.765695 ATTATGGGCAGGTAAATCACTAATG 57.234 36.000 0.00 0.00 0.00 1.90
2093 2375 9.466497 CATATTATGGGCAGGTAAATCACTAAT 57.534 33.333 0.00 0.00 0.00 1.73
2094 2376 8.444783 ACATATTATGGGCAGGTAAATCACTAA 58.555 33.333 8.48 0.00 33.60 2.24
2095 2377 7.882791 CACATATTATGGGCAGGTAAATCACTA 59.117 37.037 8.48 0.00 33.60 2.74
2096 2378 6.716628 CACATATTATGGGCAGGTAAATCACT 59.283 38.462 8.48 0.00 33.60 3.41
2097 2379 6.714810 TCACATATTATGGGCAGGTAAATCAC 59.285 38.462 8.48 0.00 32.41 3.06
2098 2380 6.846988 TCACATATTATGGGCAGGTAAATCA 58.153 36.000 8.48 0.00 32.41 2.57
2099 2381 7.944729 ATCACATATTATGGGCAGGTAAATC 57.055 36.000 8.48 0.00 32.41 2.17
2100 2382 8.725606 AAATCACATATTATGGGCAGGTAAAT 57.274 30.769 8.48 0.00 32.41 1.40
2101 2383 8.420222 CAAAATCACATATTATGGGCAGGTAAA 58.580 33.333 8.48 0.00 32.41 2.01
2102 2384 7.563188 ACAAAATCACATATTATGGGCAGGTAA 59.437 33.333 8.48 0.00 32.41 2.85
2103 2385 7.066142 ACAAAATCACATATTATGGGCAGGTA 58.934 34.615 8.48 0.00 32.41 3.08
2104 2386 5.898972 ACAAAATCACATATTATGGGCAGGT 59.101 36.000 8.48 0.00 32.41 4.00
2105 2387 6.409524 ACAAAATCACATATTATGGGCAGG 57.590 37.500 8.48 0.00 32.41 4.85
2106 2388 9.985730 ATTTACAAAATCACATATTATGGGCAG 57.014 29.630 8.48 0.00 32.41 4.85
2128 2410 9.598517 GGGCAGAATTTGATGAACATTTATTTA 57.401 29.630 0.00 0.00 0.00 1.40
2129 2411 7.278424 CGGGCAGAATTTGATGAACATTTATTT 59.722 33.333 0.00 0.00 0.00 1.40
2130 2412 6.757947 CGGGCAGAATTTGATGAACATTTATT 59.242 34.615 0.00 0.00 0.00 1.40
2131 2413 6.127366 ACGGGCAGAATTTGATGAACATTTAT 60.127 34.615 0.00 0.00 0.00 1.40
2132 2414 5.184864 ACGGGCAGAATTTGATGAACATTTA 59.815 36.000 0.00 0.00 0.00 1.40
2133 2415 4.021192 ACGGGCAGAATTTGATGAACATTT 60.021 37.500 0.00 0.00 0.00 2.32
2134 2416 3.511146 ACGGGCAGAATTTGATGAACATT 59.489 39.130 0.00 0.00 0.00 2.71
2135 2417 3.091545 ACGGGCAGAATTTGATGAACAT 58.908 40.909 0.00 0.00 0.00 2.71
2136 2418 2.228582 CACGGGCAGAATTTGATGAACA 59.771 45.455 0.00 0.00 0.00 3.18
2137 2419 2.487762 TCACGGGCAGAATTTGATGAAC 59.512 45.455 0.00 0.00 0.00 3.18
2138 2420 2.789213 TCACGGGCAGAATTTGATGAA 58.211 42.857 0.00 0.00 0.00 2.57
2139 2421 2.488204 TCACGGGCAGAATTTGATGA 57.512 45.000 0.00 0.00 0.00 2.92
2140 2422 3.788333 AATCACGGGCAGAATTTGATG 57.212 42.857 0.00 0.00 0.00 3.07
2141 2423 3.676873 GCAAATCACGGGCAGAATTTGAT 60.677 43.478 22.80 8.03 38.02 2.57
2142 2424 2.352617 GCAAATCACGGGCAGAATTTGA 60.353 45.455 22.80 6.35 38.02 2.69
2143 2425 1.994779 GCAAATCACGGGCAGAATTTG 59.005 47.619 18.05 18.05 38.40 2.32
2144 2426 1.066929 GGCAAATCACGGGCAGAATTT 60.067 47.619 0.00 0.00 0.00 1.82
2145 2427 0.532115 GGCAAATCACGGGCAGAATT 59.468 50.000 0.00 0.00 0.00 2.17
2146 2428 0.323725 AGGCAAATCACGGGCAGAAT 60.324 50.000 0.00 0.00 0.00 2.40
2147 2429 0.539438 AAGGCAAATCACGGGCAGAA 60.539 50.000 0.00 0.00 0.00 3.02
2148 2430 0.326595 TAAGGCAAATCACGGGCAGA 59.673 50.000 0.00 0.00 0.00 4.26
2149 2431 0.451783 GTAAGGCAAATCACGGGCAG 59.548 55.000 0.00 0.00 0.00 4.85
2150 2432 0.250945 TGTAAGGCAAATCACGGGCA 60.251 50.000 0.00 0.00 0.00 5.36
2151 2433 1.102978 ATGTAAGGCAAATCACGGGC 58.897 50.000 0.00 0.00 0.00 6.13
2152 2434 3.866883 AAATGTAAGGCAAATCACGGG 57.133 42.857 0.00 0.00 0.00 5.28
2153 2435 4.804108 TCAAAATGTAAGGCAAATCACGG 58.196 39.130 0.00 0.00 0.00 4.94
2154 2436 6.949578 AATCAAAATGTAAGGCAAATCACG 57.050 33.333 0.00 0.00 0.00 4.35
2155 2437 9.638239 TTCTAATCAAAATGTAAGGCAAATCAC 57.362 29.630 0.00 0.00 0.00 3.06
2198 2480 8.755028 ACTTACCTTGTAAACCAATTTCACTTT 58.245 29.630 0.00 0.00 31.20 2.66
2199 2481 8.301252 ACTTACCTTGTAAACCAATTTCACTT 57.699 30.769 0.00 0.00 31.20 3.16
2200 2482 7.891498 ACTTACCTTGTAAACCAATTTCACT 57.109 32.000 0.00 0.00 31.20 3.41
2208 2490 9.865152 ACCTTAATTTACTTACCTTGTAAACCA 57.135 29.630 0.00 0.00 40.98 3.67
2214 2496 9.802039 TGAATCACCTTAATTTACTTACCTTGT 57.198 29.630 0.00 0.00 0.00 3.16
2227 2509 9.681062 CCCCGTATAATAATGAATCACCTTAAT 57.319 33.333 0.00 0.00 0.00 1.40
2228 2510 8.882282 TCCCCGTATAATAATGAATCACCTTAA 58.118 33.333 0.00 0.00 0.00 1.85
2229 2511 8.438618 TCCCCGTATAATAATGAATCACCTTA 57.561 34.615 0.00 0.00 0.00 2.69
2230 2512 7.324388 TCCCCGTATAATAATGAATCACCTT 57.676 36.000 0.00 0.00 0.00 3.50
2231 2513 6.945636 TCCCCGTATAATAATGAATCACCT 57.054 37.500 0.00 0.00 0.00 4.00
2232 2514 6.598064 CCTTCCCCGTATAATAATGAATCACC 59.402 42.308 0.00 0.00 0.00 4.02
2233 2515 7.166167 ACCTTCCCCGTATAATAATGAATCAC 58.834 38.462 0.00 0.00 0.00 3.06
2234 2516 7.324388 ACCTTCCCCGTATAATAATGAATCA 57.676 36.000 0.00 0.00 0.00 2.57
2235 2517 7.120726 CCAACCTTCCCCGTATAATAATGAATC 59.879 40.741 0.00 0.00 0.00 2.52
2236 2518 6.946009 CCAACCTTCCCCGTATAATAATGAAT 59.054 38.462 0.00 0.00 0.00 2.57
2237 2519 6.101442 TCCAACCTTCCCCGTATAATAATGAA 59.899 38.462 0.00 0.00 0.00 2.57
2238 2520 5.607592 TCCAACCTTCCCCGTATAATAATGA 59.392 40.000 0.00 0.00 0.00 2.57
2239 2521 5.704053 GTCCAACCTTCCCCGTATAATAATG 59.296 44.000 0.00 0.00 0.00 1.90
2240 2522 5.511888 CGTCCAACCTTCCCCGTATAATAAT 60.512 44.000 0.00 0.00 0.00 1.28
2241 2523 4.202243 CGTCCAACCTTCCCCGTATAATAA 60.202 45.833 0.00 0.00 0.00 1.40
2242 2524 3.321682 CGTCCAACCTTCCCCGTATAATA 59.678 47.826 0.00 0.00 0.00 0.98
2243 2525 2.103601 CGTCCAACCTTCCCCGTATAAT 59.896 50.000 0.00 0.00 0.00 1.28
2244 2526 1.481772 CGTCCAACCTTCCCCGTATAA 59.518 52.381 0.00 0.00 0.00 0.98
2245 2527 1.113788 CGTCCAACCTTCCCCGTATA 58.886 55.000 0.00 0.00 0.00 1.47
2246 2528 0.615544 TCGTCCAACCTTCCCCGTAT 60.616 55.000 0.00 0.00 0.00 3.06
2247 2529 0.831288 TTCGTCCAACCTTCCCCGTA 60.831 55.000 0.00 0.00 0.00 4.02
2248 2530 2.108278 CTTCGTCCAACCTTCCCCGT 62.108 60.000 0.00 0.00 0.00 5.28
2249 2531 1.375523 CTTCGTCCAACCTTCCCCG 60.376 63.158 0.00 0.00 0.00 5.73
2250 2532 1.002502 CCTTCGTCCAACCTTCCCC 60.003 63.158 0.00 0.00 0.00 4.81
2251 2533 1.002502 CCCTTCGTCCAACCTTCCC 60.003 63.158 0.00 0.00 0.00 3.97
2252 2534 1.002502 CCCCTTCGTCCAACCTTCC 60.003 63.158 0.00 0.00 0.00 3.46
2253 2535 0.605589 CACCCCTTCGTCCAACCTTC 60.606 60.000 0.00 0.00 0.00 3.46
2254 2536 1.454539 CACCCCTTCGTCCAACCTT 59.545 57.895 0.00 0.00 0.00 3.50
2255 2537 2.526046 CCACCCCTTCGTCCAACCT 61.526 63.158 0.00 0.00 0.00 3.50
2256 2538 2.033602 CCACCCCTTCGTCCAACC 59.966 66.667 0.00 0.00 0.00 3.77
2257 2539 1.599797 CACCACCCCTTCGTCCAAC 60.600 63.158 0.00 0.00 0.00 3.77
2258 2540 2.824880 CCACCACCCCTTCGTCCAA 61.825 63.158 0.00 0.00 0.00 3.53
2259 2541 3.246112 CCACCACCCCTTCGTCCA 61.246 66.667 0.00 0.00 0.00 4.02
2260 2542 4.029809 CCCACCACCCCTTCGTCC 62.030 72.222 0.00 0.00 0.00 4.79
2261 2543 2.465055 CTTCCCACCACCCCTTCGTC 62.465 65.000 0.00 0.00 0.00 4.20
2262 2544 2.448931 TTCCCACCACCCCTTCGT 60.449 61.111 0.00 0.00 0.00 3.85
2263 2545 1.774894 TTCTTCCCACCACCCCTTCG 61.775 60.000 0.00 0.00 0.00 3.79
2264 2546 0.481128 TTTCTTCCCACCACCCCTTC 59.519 55.000 0.00 0.00 0.00 3.46
2265 2547 0.938192 TTTTCTTCCCACCACCCCTT 59.062 50.000 0.00 0.00 0.00 3.95
2266 2548 0.482887 CTTTTCTTCCCACCACCCCT 59.517 55.000 0.00 0.00 0.00 4.79
2267 2549 0.187606 ACTTTTCTTCCCACCACCCC 59.812 55.000 0.00 0.00 0.00 4.95
2268 2550 1.133606 TCACTTTTCTTCCCACCACCC 60.134 52.381 0.00 0.00 0.00 4.61
2269 2551 2.358322 TCACTTTTCTTCCCACCACC 57.642 50.000 0.00 0.00 0.00 4.61
2270 2552 3.488553 CGTTTCACTTTTCTTCCCACCAC 60.489 47.826 0.00 0.00 0.00 4.16
2271 2553 2.685897 CGTTTCACTTTTCTTCCCACCA 59.314 45.455 0.00 0.00 0.00 4.17
2272 2554 2.034179 CCGTTTCACTTTTCTTCCCACC 59.966 50.000 0.00 0.00 0.00 4.61
2273 2555 2.034179 CCCGTTTCACTTTTCTTCCCAC 59.966 50.000 0.00 0.00 0.00 4.61
2274 2556 2.092321 TCCCGTTTCACTTTTCTTCCCA 60.092 45.455 0.00 0.00 0.00 4.37
2275 2557 2.578786 TCCCGTTTCACTTTTCTTCCC 58.421 47.619 0.00 0.00 0.00 3.97
2276 2558 3.243301 GGTTCCCGTTTCACTTTTCTTCC 60.243 47.826 0.00 0.00 0.00 3.46
2277 2559 3.630769 AGGTTCCCGTTTCACTTTTCTTC 59.369 43.478 0.00 0.00 0.00 2.87
2278 2560 3.628008 AGGTTCCCGTTTCACTTTTCTT 58.372 40.909 0.00 0.00 0.00 2.52
2279 2561 3.292492 AGGTTCCCGTTTCACTTTTCT 57.708 42.857 0.00 0.00 0.00 2.52
2280 2562 4.336153 TGTAAGGTTCCCGTTTCACTTTTC 59.664 41.667 0.00 0.00 0.00 2.29
2281 2563 4.271661 TGTAAGGTTCCCGTTTCACTTTT 58.728 39.130 0.00 0.00 0.00 2.27
2282 2564 3.888583 TGTAAGGTTCCCGTTTCACTTT 58.111 40.909 0.00 0.00 0.00 2.66
2283 2565 3.564053 TGTAAGGTTCCCGTTTCACTT 57.436 42.857 0.00 0.00 0.00 3.16
2284 2566 3.782656 ATGTAAGGTTCCCGTTTCACT 57.217 42.857 0.00 0.00 0.00 3.41
2575 2984 5.367945 TGACTAGTTGGAATCATTACCCC 57.632 43.478 0.00 0.00 0.00 4.95
2758 3169 4.322650 GCAGAAAATTGAACCATTGGCCTA 60.323 41.667 3.32 0.00 0.00 3.93
2973 3384 7.744087 ATTAATTCACTGTAGAAACACTGCA 57.256 32.000 0.00 0.00 38.80 4.41
3668 4101 7.683704 GCAACCCTATATATATACACCCACTCG 60.684 44.444 0.00 0.00 0.00 4.18
3717 4150 1.654105 GGTCGGAGCGCATTATAATCG 59.346 52.381 11.47 10.88 0.00 3.34
3766 4199 7.630082 AGAAAAATAGGTGGTTATGCTGAGTA 58.370 34.615 0.00 0.00 0.00 2.59
3779 4212 7.112779 ACTATCCTCCACAAGAAAAATAGGTG 58.887 38.462 0.00 0.00 0.00 4.00
3839 4272 7.489160 AGAACGTACAGATGCATCAGTAATAA 58.511 34.615 27.46 10.31 31.86 1.40
3848 4281 2.209838 CGGAGAACGTACAGATGCAT 57.790 50.000 0.00 0.00 37.93 3.96
3948 4381 2.040544 GTCCATGGGCACTGAACCG 61.041 63.158 12.68 0.00 0.00 4.44
3957 4390 3.701205 AAAGGAAAAATGTCCATGGGC 57.299 42.857 10.20 10.20 40.48 5.36
4105 4540 7.775561 AGAATCAAAACCATTACCATCTAGACC 59.224 37.037 0.00 0.00 0.00 3.85
4251 4689 0.670546 CACAAGTTCCCGCTCGTCAT 60.671 55.000 0.00 0.00 0.00 3.06
4271 4709 2.465860 ATTACGTTACAGGCTGCACA 57.534 45.000 15.89 0.00 0.00 4.57
4310 4749 2.224523 ACACATAGTAATGGGCCATCCG 60.225 50.000 21.48 7.31 40.45 4.18
4415 4854 6.148150 CACACGCACCTAATTTTCTTAAGGTA 59.852 38.462 1.85 0.00 40.39 3.08
4473 4916 2.728427 CTACGCTCCGGCCGTATCAC 62.728 65.000 26.12 7.61 34.44 3.06
4474 4917 2.516695 TACGCTCCGGCCGTATCA 60.517 61.111 26.12 3.59 34.44 2.15
4650 5105 6.821665 TCCAGCTATAACAATAACTGGTGAAC 59.178 38.462 12.32 0.00 44.07 3.18
4652 5107 6.553953 TCCAGCTATAACAATAACTGGTGA 57.446 37.500 12.32 0.00 44.07 4.02
4756 5211 3.425162 ACTTCCCCAGTCAGAATGTTC 57.575 47.619 0.00 0.00 37.40 3.18
4819 5274 9.936329 TCCTAGAAATATTAAAAGATGCCCTTT 57.064 29.630 0.00 0.00 46.47 3.11
4820 5275 9.355916 GTCCTAGAAATATTAAAAGATGCCCTT 57.644 33.333 0.00 0.00 36.47 3.95
4821 5276 8.502738 TGTCCTAGAAATATTAAAAGATGCCCT 58.497 33.333 0.00 0.00 0.00 5.19
4822 5277 8.691661 TGTCCTAGAAATATTAAAAGATGCCC 57.308 34.615 0.00 0.00 0.00 5.36
5207 5830 3.079960 AGTGGTTATATGCTGTCGACG 57.920 47.619 11.62 7.05 0.00 5.12
5247 5870 7.662669 ACACGTTACTAATTGTTTAGGACCAAT 59.337 33.333 0.00 0.00 39.36 3.16
5270 5895 7.809806 GGGCTTGCATATATATTTCTTCAACAC 59.190 37.037 0.00 0.00 0.00 3.32
5370 5995 1.150827 CGTGAGCTCAGCAATGTCAA 58.849 50.000 18.89 0.00 0.00 3.18
5631 6271 6.774656 CCCAGCATTTCAGGATAACTAGAATT 59.225 38.462 0.00 0.00 0.00 2.17
5710 6350 9.093970 CAAAATGTCAATATTTGATCAGCACAT 57.906 29.630 0.00 0.00 42.47 3.21
5736 6376 5.852827 TGAAGTCAAAATTTGATTCCCCAC 58.147 37.500 11.87 0.00 42.47 4.61
5750 6390 3.631144 CAAGCGAGCAAATGAAGTCAAA 58.369 40.909 0.00 0.00 0.00 2.69
5842 6482 7.869937 CGACATTCTAGTCCACATATCAAAGAT 59.130 37.037 0.00 0.00 35.07 2.40
6001 6642 1.143073 AGAGGAAGGCGGAAACAGTTT 59.857 47.619 0.00 0.00 0.00 2.66
6294 7017 6.673076 ATTTCAGTGAAATGTCGTAGAATGCG 60.673 38.462 26.51 0.00 42.06 4.73
6554 7277 5.413523 CCGGTAACAAATTTGTACTAGGCTT 59.586 40.000 23.53 8.50 41.31 4.35
6627 7570 2.988010 ACCAGCATAAATCGCAGAGA 57.012 45.000 0.00 0.00 43.63 3.10
6640 7583 1.301401 AGCGACGCTTTAACCAGCA 60.301 52.632 18.46 0.00 40.09 4.41
6641 7584 1.132640 CAGCGACGCTTTAACCAGC 59.867 57.895 21.97 0.00 36.40 4.85
6843 7786 0.396811 GGGAACACCAGTGTAGCACT 59.603 55.000 3.43 0.00 46.51 4.40
6844 7787 0.396811 AGGGAACACCAGTGTAGCAC 59.603 55.000 3.43 1.04 44.13 4.40
6845 7788 0.396435 CAGGGAACACCAGTGTAGCA 59.604 55.000 3.43 0.00 44.13 3.49
6859 7802 0.193574 AGAAGGAAGGGACACAGGGA 59.806 55.000 0.00 0.00 0.00 4.20
6879 7870 2.358737 GTGTCCAGGTCCAAGCCG 60.359 66.667 0.00 0.00 0.00 5.52
6880 7871 2.034221 GGTGTCCAGGTCCAAGCC 59.966 66.667 0.00 0.00 0.00 4.35
6881 7872 0.962356 CATGGTGTCCAGGTCCAAGC 60.962 60.000 5.22 0.00 36.75 4.01
6882 7873 0.962356 GCATGGTGTCCAGGTCCAAG 60.962 60.000 0.00 3.05 37.65 3.61
6883 7874 1.074775 GCATGGTGTCCAGGTCCAA 59.925 57.895 0.00 0.00 37.65 3.53
6884 7875 1.426251 AAGCATGGTGTCCAGGTCCA 61.426 55.000 0.00 3.91 37.65 4.02
6885 7876 0.678048 GAAGCATGGTGTCCAGGTCC 60.678 60.000 0.00 0.00 37.65 4.46
6886 7877 0.678048 GGAAGCATGGTGTCCAGGTC 60.678 60.000 16.40 2.53 37.65 3.85
6887 7878 1.380302 GGAAGCATGGTGTCCAGGT 59.620 57.895 16.40 0.00 37.65 4.00
6888 7879 1.379916 TGGAAGCATGGTGTCCAGG 59.620 57.895 18.72 0.00 36.51 4.45
6901 7892 0.034896 ACGTAACCACCAGCTGGAAG 59.965 55.000 39.19 28.67 43.95 3.46
6902 7893 0.034337 GACGTAACCACCAGCTGGAA 59.966 55.000 39.19 15.22 43.95 3.53
6903 7894 1.669440 GACGTAACCACCAGCTGGA 59.331 57.895 39.19 13.98 43.95 3.86
6905 7896 1.006571 ACGACGTAACCACCAGCTG 60.007 57.895 6.78 6.78 0.00 4.24
6906 7897 1.288127 GACGACGTAACCACCAGCT 59.712 57.895 0.00 0.00 0.00 4.24
6907 7898 1.735559 GGACGACGTAACCACCAGC 60.736 63.158 0.00 0.00 0.00 4.85
6908 7899 0.109412 GAGGACGACGTAACCACCAG 60.109 60.000 0.00 0.00 0.00 4.00
6909 7900 1.855213 CGAGGACGACGTAACCACCA 61.855 60.000 0.00 0.00 42.66 4.17
6910 7901 1.154150 CGAGGACGACGTAACCACC 60.154 63.158 0.00 0.00 42.66 4.61
6911 7902 1.154150 CCGAGGACGACGTAACCAC 60.154 63.158 0.00 0.00 42.66 4.16
6912 7903 2.981560 GCCGAGGACGACGTAACCA 61.982 63.158 0.00 0.00 42.66 3.67
6913 7904 2.202531 GCCGAGGACGACGTAACC 60.203 66.667 0.00 0.00 42.66 2.85
6914 7905 1.513586 CAGCCGAGGACGACGTAAC 60.514 63.158 0.00 0.00 42.66 2.50
6915 7906 1.028330 ATCAGCCGAGGACGACGTAA 61.028 55.000 0.00 0.00 42.66 3.18
6916 7907 0.179076 TATCAGCCGAGGACGACGTA 60.179 55.000 0.00 0.00 42.66 3.57
6917 7908 1.450848 TATCAGCCGAGGACGACGT 60.451 57.895 0.00 0.00 42.66 4.34
6918 7909 1.009900 GTATCAGCCGAGGACGACG 60.010 63.158 0.00 0.00 42.66 5.12
6919 7910 0.669077 ATGTATCAGCCGAGGACGAC 59.331 55.000 0.00 0.00 42.66 4.34
6920 7911 1.878088 GTATGTATCAGCCGAGGACGA 59.122 52.381 0.00 0.00 42.66 4.20
6921 7912 1.068472 GGTATGTATCAGCCGAGGACG 60.068 57.143 0.00 0.00 39.43 4.79
6922 7913 1.961394 TGGTATGTATCAGCCGAGGAC 59.039 52.381 0.00 0.00 0.00 3.85
6923 7914 2.375014 TGGTATGTATCAGCCGAGGA 57.625 50.000 0.00 0.00 0.00 3.71
6924 7915 3.131396 GTTTGGTATGTATCAGCCGAGG 58.869 50.000 0.00 0.00 0.00 4.63
6925 7916 4.051922 GAGTTTGGTATGTATCAGCCGAG 58.948 47.826 0.00 0.00 0.00 4.63
6926 7917 3.704566 AGAGTTTGGTATGTATCAGCCGA 59.295 43.478 0.00 0.00 0.00 5.54
6949 7940 9.880157 ACCTACGTTGTAACATTAATGAATACT 57.120 29.630 22.16 10.30 0.00 2.12
7007 7998 5.453648 TGCAAACGCAAATCTAACGTAAAT 58.546 33.333 0.00 0.00 39.49 1.40
7017 8008 4.864247 AGATTGGTAATGCAAACGCAAATC 59.136 37.500 0.00 3.74 44.09 2.17
7030 8021 5.393866 AGTGTTTGGTTCCAGATTGGTAAT 58.606 37.500 0.00 0.00 39.03 1.89
7077 8072 5.362717 AGTGCTGCAGGTAGTATAACATACA 59.637 40.000 17.12 0.00 0.00 2.29
7109 8104 3.380479 TTCTCACCCACTTGAACTACG 57.620 47.619 0.00 0.00 0.00 3.51
7260 8255 3.753272 GAGTTGCATAGAGCCAAAAGTGA 59.247 43.478 0.00 0.00 44.83 3.41
7262 8257 3.503748 GTGAGTTGCATAGAGCCAAAAGT 59.496 43.478 0.00 0.00 44.83 2.66
7408 8406 2.601979 GCGAAAAATGCCAAAACAAGCC 60.602 45.455 0.00 0.00 0.00 4.35
7469 8467 2.945008 TGCATAGCCATTTCTTCTTCGG 59.055 45.455 0.00 0.00 0.00 4.30
7470 8468 4.514441 AGATGCATAGCCATTTCTTCTTCG 59.486 41.667 0.00 0.00 0.00 3.79
7472 8470 5.655532 ACAAGATGCATAGCCATTTCTTCTT 59.344 36.000 0.00 0.00 0.00 2.52
7473 8471 5.067413 CACAAGATGCATAGCCATTTCTTCT 59.933 40.000 0.00 0.00 0.00 2.85
7474 8472 5.066893 TCACAAGATGCATAGCCATTTCTTC 59.933 40.000 0.00 0.00 0.00 2.87
7477 8475 4.906065 TCACAAGATGCATAGCCATTTC 57.094 40.909 0.00 0.00 0.00 2.17
7480 8478 4.466827 TCATTCACAAGATGCATAGCCAT 58.533 39.130 0.00 0.00 0.00 4.40
7481 8479 3.881089 CTCATTCACAAGATGCATAGCCA 59.119 43.478 0.00 0.00 0.00 4.75
7482 8480 4.132336 TCTCATTCACAAGATGCATAGCC 58.868 43.478 0.00 0.00 0.00 3.93
7483 8481 5.746307 TTCTCATTCACAAGATGCATAGC 57.254 39.130 0.00 0.00 0.00 2.97
7484 8482 7.856398 GTCATTTCTCATTCACAAGATGCATAG 59.144 37.037 0.00 0.00 0.00 2.23
7485 8483 7.466320 CGTCATTTCTCATTCACAAGATGCATA 60.466 37.037 0.00 0.00 0.00 3.14
7486 8484 6.561614 GTCATTTCTCATTCACAAGATGCAT 58.438 36.000 0.00 0.00 0.00 3.96
7488 8486 5.026462 CGTCATTTCTCATTCACAAGATGC 58.974 41.667 0.00 0.00 0.00 3.91
7489 8487 5.026462 GCGTCATTTCTCATTCACAAGATG 58.974 41.667 0.00 0.00 0.00 2.90
7502 8500 4.213482 GTGTAACTGGAAAGCGTCATTTCT 59.787 41.667 8.92 0.00 38.86 2.52
7592 8752 1.083657 CAAACTGTCCGTGCGTTCG 60.084 57.895 0.00 0.00 0.00 3.95
7619 8779 7.665559 AAAATAGCTCCACTGTTTTCTGTGATA 59.334 33.333 0.00 0.00 43.78 2.15
7673 8833 5.473504 GCTGATGTGTTTCCTAGGAGAAAAA 59.526 40.000 12.26 0.00 37.49 1.94
7721 8881 0.037326 CTTGTGGCGGCACTTCTCTA 60.037 55.000 37.33 17.72 0.00 2.43
7739 8899 4.832248 TGTGTTGACTTCTTTCTGTGTCT 58.168 39.130 0.00 0.00 0.00 3.41
7755 8915 2.260869 CCTCAGGGCGGTTGTGTTG 61.261 63.158 0.00 0.00 0.00 3.33
7756 8916 2.113139 CCTCAGGGCGGTTGTGTT 59.887 61.111 0.00 0.00 0.00 3.32
7757 8917 2.279037 AAACCTCAGGGCGGTTGTGT 62.279 55.000 0.00 0.00 43.66 3.72
7758 8918 1.515521 GAAACCTCAGGGCGGTTGTG 61.516 60.000 0.00 0.00 43.66 3.33
7759 8919 1.228154 GAAACCTCAGGGCGGTTGT 60.228 57.895 0.00 0.00 43.66 3.32
7760 8920 1.228124 TGAAACCTCAGGGCGGTTG 60.228 57.895 0.00 0.00 43.66 3.77
7808 8969 1.954382 GGGGATGAAATAGCCGGTTTC 59.046 52.381 1.90 6.17 34.98 2.78
7813 8974 0.764890 TCCAGGGGATGAAATAGCCG 59.235 55.000 0.00 0.00 34.98 5.52
7825 10639 0.111253 AGTTCTGCAAACTCCAGGGG 59.889 55.000 8.03 0.00 0.00 4.79
7840 10654 4.192317 CCAGTGGGTGCTTTATCTAGTTC 58.808 47.826 0.00 0.00 0.00 3.01
7858 10672 0.990374 AGCAGATCAAAGCTCCCAGT 59.010 50.000 0.00 0.00 36.00 4.00
7889 10703 1.373497 CAAGGCTGCGTCGACTTCT 60.373 57.895 14.70 0.87 0.00 2.85
7917 10731 5.045651 TGTCATAGTCCAGTGATGGTCATTT 60.046 40.000 0.00 0.00 0.00 2.32
7924 10749 5.460091 CGTGTAATGTCATAGTCCAGTGATG 59.540 44.000 0.00 0.00 0.00 3.07
7930 10755 2.498078 TGGCGTGTAATGTCATAGTCCA 59.502 45.455 0.00 0.00 28.59 4.02
7931 10756 2.864343 GTGGCGTGTAATGTCATAGTCC 59.136 50.000 0.00 0.00 41.00 3.85
7932 10757 2.864343 GGTGGCGTGTAATGTCATAGTC 59.136 50.000 0.00 0.00 41.00 2.59
7933 10758 2.419574 GGGTGGCGTGTAATGTCATAGT 60.420 50.000 0.00 0.00 41.00 2.12
7934 10759 2.210116 GGGTGGCGTGTAATGTCATAG 58.790 52.381 0.00 0.00 41.00 2.23
7935 10760 1.555533 TGGGTGGCGTGTAATGTCATA 59.444 47.619 0.00 0.00 41.00 2.15
7936 10761 0.326595 TGGGTGGCGTGTAATGTCAT 59.673 50.000 0.00 0.00 41.00 3.06
7937 10762 0.321210 CTGGGTGGCGTGTAATGTCA 60.321 55.000 0.00 0.00 33.22 3.58
7938 10763 1.644786 GCTGGGTGGCGTGTAATGTC 61.645 60.000 0.00 0.00 0.00 3.06
7939 10764 1.674322 GCTGGGTGGCGTGTAATGT 60.674 57.895 0.00 0.00 0.00 2.71
7940 10765 3.187058 GCTGGGTGGCGTGTAATG 58.813 61.111 0.00 0.00 0.00 1.90
7966 10791 0.882927 ATGTTTGTGGGTGTCGTCGG 60.883 55.000 0.00 0.00 0.00 4.79
7992 10821 3.517296 ATGTGTGTGGGTGTCCATTTA 57.483 42.857 0.00 0.00 46.09 1.40
8106 10943 4.761975 TGTTTCAAGACCAGTTAACGAGT 58.238 39.130 0.00 1.43 0.00 4.18
8109 10946 5.212194 CCAATGTTTCAAGACCAGTTAACG 58.788 41.667 0.00 0.00 0.00 3.18
8113 10950 4.709397 TGAACCAATGTTTCAAGACCAGTT 59.291 37.500 0.00 0.00 33.97 3.16
8246 11084 9.382275 GAACCAATGTGGCTAAATTGAATATTT 57.618 29.630 14.21 0.22 42.67 1.40
8250 11088 6.211184 TGAGAACCAATGTGGCTAAATTGAAT 59.789 34.615 14.21 2.73 42.67 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.