Multiple sequence alignment - TraesCS6A01G215800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G215800 chr6A 100.000 4939 0 0 1 4939 397528030 397523092 0.000000e+00 9121.0
1 TraesCS6A01G215800 chr6B 96.653 2241 43 7 2032 4260 439381191 439383411 0.000000e+00 3694.0
2 TraesCS6A01G215800 chr6B 94.842 698 19 5 4243 4939 439389902 439390583 0.000000e+00 1074.0
3 TraesCS6A01G215800 chr6B 91.181 635 35 12 657 1277 439379722 439380349 0.000000e+00 843.0
4 TraesCS6A01G215800 chr6B 96.211 475 8 4 1378 1846 439380739 439381209 0.000000e+00 769.0
5 TraesCS6A01G215800 chr6B 80.814 172 25 6 359 522 472708151 472708322 1.440000e-25 128.0
6 TraesCS6A01G215800 chr6B 89.899 99 9 1 1274 1371 439380509 439380607 5.190000e-25 126.0
7 TraesCS6A01G215800 chr6B 75.401 187 29 11 100 274 151841229 151841410 1.910000e-09 75.0
8 TraesCS6A01G215800 chr6D 96.481 1421 33 13 2032 3445 277651865 277653275 0.000000e+00 2331.0
9 TraesCS6A01G215800 chr6D 91.667 1212 42 23 644 1846 277650722 277651883 0.000000e+00 1624.0
10 TraesCS6A01G215800 chr6D 90.000 70 7 0 208 277 284508715 284508646 1.890000e-14 91.6
11 TraesCS6A01G215800 chr6D 84.946 93 9 4 185 272 387797060 387796968 6.810000e-14 89.8
12 TraesCS6A01G215800 chr5B 97.938 194 2 2 1838 2031 573807557 573807748 7.920000e-88 335.0
13 TraesCS6A01G215800 chr5B 94.860 214 6 3 1837 2050 275239860 275239652 3.690000e-86 329.0
14 TraesCS6A01G215800 chr5B 80.814 172 23 8 359 522 369476771 369476940 5.190000e-25 126.0
15 TraesCS6A01G215800 chr5B 78.836 189 29 9 359 538 593936470 593936284 3.120000e-22 117.0
16 TraesCS6A01G215800 chr5B 77.465 142 19 8 185 313 463155470 463155611 6.860000e-09 73.1
17 TraesCS6A01G215800 chr5A 96.098 205 5 3 1846 2050 2669075 2668874 1.020000e-86 331.0
18 TraesCS6A01G215800 chr5A 85.897 78 8 1 4862 4939 230918476 230918402 4.100000e-11 80.5
19 TraesCS6A01G215800 chr4A 96.098 205 5 2 1829 2032 114586481 114586279 1.020000e-86 331.0
20 TraesCS6A01G215800 chr4B 93.013 229 8 7 1848 2073 128540854 128540631 1.330000e-85 327.0
21 TraesCS6A01G215800 chr4B 92.793 222 9 6 1844 2063 63757115 63757331 1.030000e-81 315.0
22 TraesCS6A01G215800 chr7B 94.231 208 9 3 1842 2047 440006190 440005984 1.030000e-81 315.0
23 TraesCS6A01G215800 chr7B 91.667 228 13 5 1838 2064 358498509 358498287 1.340000e-80 311.0
24 TraesCS6A01G215800 chr7B 80.114 176 21 9 357 520 643163445 643163272 8.690000e-23 119.0
25 TraesCS6A01G215800 chr7B 77.717 184 35 6 345 522 24003982 24004165 1.880000e-19 108.0
26 TraesCS6A01G215800 chr7B 82.178 101 11 7 183 277 685481065 685480966 4.100000e-11 80.5
27 TraesCS6A01G215800 chr2A 93.689 206 11 2 1830 2033 644083296 644083501 1.730000e-79 307.0
28 TraesCS6A01G215800 chr2A 81.651 109 18 2 166 273 615362825 615362932 6.810000e-14 89.8
29 TraesCS6A01G215800 chrUn 81.714 175 21 5 359 522 35731564 35731390 8.620000e-28 135.0
30 TraesCS6A01G215800 chrUn 81.714 175 21 5 359 522 242150747 242150921 8.620000e-28 135.0
31 TraesCS6A01G215800 chrUn 80.000 185 18 13 105 277 229357221 229357398 8.690000e-23 119.0
32 TraesCS6A01G215800 chrUn 89.706 68 5 2 345 410 310404535 310404602 8.810000e-13 86.1
33 TraesCS6A01G215800 chr3D 92.391 92 7 0 4841 4932 422552667 422552758 1.120000e-26 132.0
34 TraesCS6A01G215800 chr3D 79.381 194 28 9 87 274 450241298 450241111 5.190000e-25 126.0
35 TraesCS6A01G215800 chr3B 92.391 92 7 0 4841 4932 550666352 550666443 1.120000e-26 132.0
36 TraesCS6A01G215800 chr7A 81.667 120 15 6 156 271 652605679 652605563 5.260000e-15 93.5
37 TraesCS6A01G215800 chr2D 88.462 78 6 2 4862 4939 210346170 210346244 1.890000e-14 91.6
38 TraesCS6A01G215800 chr2D 88.462 78 6 1 4862 4939 218299400 218299474 1.890000e-14 91.6
39 TraesCS6A01G215800 chr5D 80.000 135 16 7 281 404 497016654 497016520 6.810000e-14 89.8
40 TraesCS6A01G215800 chr5D 80.357 112 16 5 133 238 242648110 242647999 4.100000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G215800 chr6A 397523092 397528030 4938 True 9121.0 9121 100.000 1 4939 1 chr6A.!!$R1 4938
1 TraesCS6A01G215800 chr6B 439379722 439383411 3689 False 1358.0 3694 93.486 657 4260 4 chr6B.!!$F4 3603
2 TraesCS6A01G215800 chr6B 439389902 439390583 681 False 1074.0 1074 94.842 4243 4939 1 chr6B.!!$F2 696
3 TraesCS6A01G215800 chr6D 277650722 277653275 2553 False 1977.5 2331 94.074 644 3445 2 chr6D.!!$F1 2801

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
300 301 0.040067 CGGAAGCAAAACTGTGCCTC 60.040 55.0 0.0 0.0 46.14 4.70 F
305 306 0.040958 GCAAAACTGTGCCTCTCGTG 60.041 55.0 0.0 0.0 38.66 4.35 F
1999 2314 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.0 0.0 0.0 44.78 4.85 F
2012 2327 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.0 0.0 0.0 38.40 4.00 F
2804 3132 0.527565 AAATCATCAGCCGCACCAAC 59.472 50.0 0.0 0.0 0.00 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1969 2284 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.0 0.0 0.0 0.00 2.69 R
2016 2331 0.040204 ATGTTGAAGGGGAGCCTTGG 59.960 55.0 0.0 0.0 0.00 3.61 R
3619 3954 1.406219 CGCGTCTGAACAGTCATCGG 61.406 60.0 0.0 0.0 34.07 4.18 R
3637 3972 2.932614 CCTAAGCTCATCAACTTGTCCG 59.067 50.0 0.0 0.0 0.00 4.79 R
4066 4401 0.038159 CTCTTCCACTTCGCCGTTCT 60.038 55.0 0.0 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 3.418684 AAAACCGAACTAGGAGCATGT 57.581 42.857 0.00 0.00 34.73 3.21
45 46 4.546829 AAAACCGAACTAGGAGCATGTA 57.453 40.909 0.00 0.00 34.73 2.29
46 47 4.755266 AAACCGAACTAGGAGCATGTAT 57.245 40.909 0.00 0.00 34.73 2.29
47 48 4.755266 AACCGAACTAGGAGCATGTATT 57.245 40.909 0.00 0.00 34.73 1.89
48 49 4.755266 ACCGAACTAGGAGCATGTATTT 57.245 40.909 0.00 0.00 34.73 1.40
49 50 5.099042 ACCGAACTAGGAGCATGTATTTT 57.901 39.130 0.00 0.00 34.73 1.82
50 51 5.497474 ACCGAACTAGGAGCATGTATTTTT 58.503 37.500 0.00 0.00 34.73 1.94
51 52 5.585047 ACCGAACTAGGAGCATGTATTTTTC 59.415 40.000 0.00 0.00 34.73 2.29
52 53 5.007724 CCGAACTAGGAGCATGTATTTTTCC 59.992 44.000 0.00 0.00 0.00 3.13
53 54 5.817816 CGAACTAGGAGCATGTATTTTTCCT 59.182 40.000 0.00 0.99 41.07 3.36
54 55 6.316390 CGAACTAGGAGCATGTATTTTTCCTT 59.684 38.462 0.00 0.00 39.02 3.36
55 56 7.148239 CGAACTAGGAGCATGTATTTTTCCTTT 60.148 37.037 0.00 0.00 39.02 3.11
56 57 8.422577 AACTAGGAGCATGTATTTTTCCTTTT 57.577 30.769 0.00 0.00 39.02 2.27
57 58 8.422577 ACTAGGAGCATGTATTTTTCCTTTTT 57.577 30.769 0.00 0.00 39.02 1.94
58 59 8.306761 ACTAGGAGCATGTATTTTTCCTTTTTG 58.693 33.333 0.00 0.00 39.02 2.44
59 60 6.466812 AGGAGCATGTATTTTTCCTTTTTGG 58.533 36.000 0.00 0.00 34.71 3.28
60 61 6.043127 AGGAGCATGTATTTTTCCTTTTTGGT 59.957 34.615 0.00 0.00 34.71 3.67
61 62 7.234577 AGGAGCATGTATTTTTCCTTTTTGGTA 59.765 33.333 0.00 0.00 34.71 3.25
62 63 7.545615 GGAGCATGTATTTTTCCTTTTTGGTAG 59.454 37.037 0.00 0.00 37.07 3.18
63 64 6.873605 AGCATGTATTTTTCCTTTTTGGTAGC 59.126 34.615 0.00 0.00 37.07 3.58
64 65 6.092122 GCATGTATTTTTCCTTTTTGGTAGCC 59.908 38.462 0.00 0.00 37.07 3.93
65 66 6.732896 TGTATTTTTCCTTTTTGGTAGCCA 57.267 33.333 0.00 0.00 37.07 4.75
66 67 7.309770 TGTATTTTTCCTTTTTGGTAGCCAT 57.690 32.000 0.00 0.00 37.07 4.40
67 68 7.740805 TGTATTTTTCCTTTTTGGTAGCCATT 58.259 30.769 0.00 0.00 37.07 3.16
68 69 8.214364 TGTATTTTTCCTTTTTGGTAGCCATTT 58.786 29.630 0.00 0.00 37.07 2.32
69 70 7.744087 ATTTTTCCTTTTTGGTAGCCATTTC 57.256 32.000 0.00 0.00 37.07 2.17
70 71 4.882842 TTCCTTTTTGGTAGCCATTTCC 57.117 40.909 0.00 0.00 37.07 3.13
71 72 2.823154 TCCTTTTTGGTAGCCATTTCCG 59.177 45.455 0.00 0.00 37.07 4.30
72 73 2.823154 CCTTTTTGGTAGCCATTTCCGA 59.177 45.455 0.00 0.00 31.53 4.55
73 74 3.119495 CCTTTTTGGTAGCCATTTCCGAG 60.119 47.826 0.00 0.00 31.53 4.63
74 75 3.426787 TTTTGGTAGCCATTTCCGAGA 57.573 42.857 0.00 0.00 31.53 4.04
75 76 2.691409 TTGGTAGCCATTTCCGAGAG 57.309 50.000 0.00 0.00 31.53 3.20
76 77 1.209504 TTGGTAGCCATTTCCGAGAGG 59.790 52.381 0.00 0.00 43.50 3.69
87 88 4.577246 CGAGAGGCACGGGCTAGC 62.577 72.222 10.74 6.04 38.98 3.42
88 89 4.577246 GAGAGGCACGGGCTAGCG 62.577 72.222 10.74 0.00 38.98 4.26
90 91 4.143333 GAGGCACGGGCTAGCGAA 62.143 66.667 10.74 0.00 38.98 4.70
91 92 3.659089 GAGGCACGGGCTAGCGAAA 62.659 63.158 10.74 0.00 38.98 3.46
92 93 3.195698 GGCACGGGCTAGCGAAAG 61.196 66.667 10.74 2.25 40.87 2.62
93 94 2.434359 GCACGGGCTAGCGAAAGT 60.434 61.111 0.00 2.92 36.96 2.66
94 95 1.153706 GCACGGGCTAGCGAAAGTA 60.154 57.895 0.00 0.00 36.96 2.24
95 96 0.738412 GCACGGGCTAGCGAAAGTAA 60.738 55.000 0.00 0.00 36.96 2.24
96 97 1.717194 CACGGGCTAGCGAAAGTAAA 58.283 50.000 9.00 0.00 0.00 2.01
97 98 2.277084 CACGGGCTAGCGAAAGTAAAT 58.723 47.619 9.00 0.00 0.00 1.40
98 99 2.676342 CACGGGCTAGCGAAAGTAAATT 59.324 45.455 9.00 0.00 0.00 1.82
99 100 2.934553 ACGGGCTAGCGAAAGTAAATTC 59.065 45.455 9.00 0.00 0.00 2.17
100 101 2.933906 CGGGCTAGCGAAAGTAAATTCA 59.066 45.455 9.00 0.00 0.00 2.57
101 102 3.560068 CGGGCTAGCGAAAGTAAATTCAT 59.440 43.478 9.00 0.00 0.00 2.57
102 103 4.552767 CGGGCTAGCGAAAGTAAATTCATG 60.553 45.833 9.00 0.00 0.00 3.07
103 104 4.282873 GGCTAGCGAAAGTAAATTCATGC 58.717 43.478 9.00 0.00 0.00 4.06
104 105 4.282873 GCTAGCGAAAGTAAATTCATGCC 58.717 43.478 0.00 0.00 0.00 4.40
105 106 4.035675 GCTAGCGAAAGTAAATTCATGCCT 59.964 41.667 0.00 0.00 0.00 4.75
106 107 4.622701 AGCGAAAGTAAATTCATGCCTC 57.377 40.909 0.00 0.00 0.00 4.70
107 108 3.378427 AGCGAAAGTAAATTCATGCCTCC 59.622 43.478 0.00 0.00 0.00 4.30
108 109 3.489229 GCGAAAGTAAATTCATGCCTCCC 60.489 47.826 0.00 0.00 0.00 4.30
109 110 3.242739 CGAAAGTAAATTCATGCCTCCCG 60.243 47.826 0.00 0.00 0.00 5.14
110 111 2.348411 AGTAAATTCATGCCTCCCGG 57.652 50.000 0.00 0.00 0.00 5.73
111 112 1.843851 AGTAAATTCATGCCTCCCGGA 59.156 47.619 0.73 0.00 0.00 5.14
112 113 2.241176 AGTAAATTCATGCCTCCCGGAA 59.759 45.455 0.73 0.00 0.00 4.30
113 114 1.767759 AAATTCATGCCTCCCGGAAG 58.232 50.000 0.73 0.00 0.00 3.46
114 115 0.753111 AATTCATGCCTCCCGGAAGC 60.753 55.000 0.73 2.59 0.00 3.86
115 116 1.925285 ATTCATGCCTCCCGGAAGCA 61.925 55.000 13.19 13.19 41.50 3.91
116 117 2.045045 CATGCCTCCCGGAAGCAA 60.045 61.111 14.75 0.00 40.46 3.91
117 118 1.678635 CATGCCTCCCGGAAGCAAA 60.679 57.895 14.75 0.00 40.46 3.68
118 119 1.076549 ATGCCTCCCGGAAGCAAAA 59.923 52.632 14.75 0.00 40.46 2.44
119 120 0.324645 ATGCCTCCCGGAAGCAAAAT 60.325 50.000 14.75 0.00 40.46 1.82
120 121 0.965363 TGCCTCCCGGAAGCAAAATC 60.965 55.000 8.34 0.00 32.56 2.17
121 122 1.993369 GCCTCCCGGAAGCAAAATCG 61.993 60.000 0.73 0.00 0.00 3.34
122 123 1.429423 CTCCCGGAAGCAAAATCGC 59.571 57.895 0.73 0.00 0.00 4.58
123 124 1.302913 TCCCGGAAGCAAAATCGCA 60.303 52.632 0.73 0.00 0.00 5.10
124 125 1.154035 CCCGGAAGCAAAATCGCAC 60.154 57.895 0.73 0.00 0.00 5.34
125 126 1.154035 CCGGAAGCAAAATCGCACC 60.154 57.895 0.00 0.00 0.00 5.01
126 127 1.586154 CCGGAAGCAAAATCGCACCT 61.586 55.000 0.00 0.00 0.00 4.00
127 128 0.179189 CGGAAGCAAAATCGCACCTC 60.179 55.000 0.00 0.00 0.00 3.85
128 129 1.168714 GGAAGCAAAATCGCACCTCT 58.831 50.000 0.00 0.00 0.00 3.69
129 130 1.541588 GGAAGCAAAATCGCACCTCTT 59.458 47.619 0.00 0.00 0.00 2.85
130 131 2.747446 GGAAGCAAAATCGCACCTCTTA 59.253 45.455 0.00 0.00 0.00 2.10
131 132 3.426292 GGAAGCAAAATCGCACCTCTTAC 60.426 47.826 0.00 0.00 0.00 2.34
132 133 2.778299 AGCAAAATCGCACCTCTTACA 58.222 42.857 0.00 0.00 0.00 2.41
133 134 3.146066 AGCAAAATCGCACCTCTTACAA 58.854 40.909 0.00 0.00 0.00 2.41
134 135 3.568007 AGCAAAATCGCACCTCTTACAAA 59.432 39.130 0.00 0.00 0.00 2.83
135 136 4.037446 AGCAAAATCGCACCTCTTACAAAA 59.963 37.500 0.00 0.00 0.00 2.44
136 137 4.742659 GCAAAATCGCACCTCTTACAAAAA 59.257 37.500 0.00 0.00 0.00 1.94
177 178 1.988293 TTTTCCATTTCCGAGTGGCA 58.012 45.000 0.00 0.00 35.43 4.92
178 179 2.214376 TTTCCATTTCCGAGTGGCAT 57.786 45.000 0.00 0.00 35.43 4.40
179 180 1.750193 TTCCATTTCCGAGTGGCATC 58.250 50.000 0.00 0.00 35.43 3.91
180 181 0.617935 TCCATTTCCGAGTGGCATCA 59.382 50.000 0.00 0.00 35.43 3.07
181 182 1.212688 TCCATTTCCGAGTGGCATCAT 59.787 47.619 0.00 0.00 35.43 2.45
182 183 1.605710 CCATTTCCGAGTGGCATCATC 59.394 52.381 0.00 0.00 34.14 2.92
183 184 2.291365 CATTTCCGAGTGGCATCATCA 58.709 47.619 0.00 0.00 34.14 3.07
184 185 2.715749 TTTCCGAGTGGCATCATCAT 57.284 45.000 0.00 0.00 34.14 2.45
185 186 1.957668 TTCCGAGTGGCATCATCATG 58.042 50.000 0.00 0.00 34.14 3.07
194 195 2.151295 CATCATCATGCCTCTCGCG 58.849 57.895 0.00 0.00 42.08 5.87
195 196 1.005275 ATCATCATGCCTCTCGCGG 60.005 57.895 6.13 0.00 42.08 6.46
196 197 1.466851 ATCATCATGCCTCTCGCGGA 61.467 55.000 6.13 1.01 42.08 5.54
197 198 1.227350 CATCATGCCTCTCGCGGAA 60.227 57.895 6.13 0.00 42.08 4.30
198 199 0.811219 CATCATGCCTCTCGCGGAAA 60.811 55.000 6.13 0.00 42.08 3.13
199 200 0.811616 ATCATGCCTCTCGCGGAAAC 60.812 55.000 6.13 0.00 42.08 2.78
200 201 1.741401 CATGCCTCTCGCGGAAACA 60.741 57.895 6.13 4.10 42.08 2.83
201 202 1.003839 ATGCCTCTCGCGGAAACAA 60.004 52.632 6.13 0.00 42.08 2.83
202 203 0.605319 ATGCCTCTCGCGGAAACAAA 60.605 50.000 6.13 0.00 42.08 2.83
203 204 0.816018 TGCCTCTCGCGGAAACAAAA 60.816 50.000 6.13 0.00 42.08 2.44
204 205 0.385598 GCCTCTCGCGGAAACAAAAC 60.386 55.000 6.13 0.00 0.00 2.43
205 206 0.237498 CCTCTCGCGGAAACAAAACC 59.763 55.000 6.13 0.00 0.00 3.27
206 207 0.941542 CTCTCGCGGAAACAAAACCA 59.058 50.000 6.13 0.00 0.00 3.67
207 208 1.535462 CTCTCGCGGAAACAAAACCAT 59.465 47.619 6.13 0.00 0.00 3.55
208 209 1.265635 TCTCGCGGAAACAAAACCATG 59.734 47.619 6.13 0.00 0.00 3.66
209 210 1.001815 CTCGCGGAAACAAAACCATGT 60.002 47.619 6.13 0.00 34.24 3.21
210 211 1.002251 TCGCGGAAACAAAACCATGTC 60.002 47.619 6.13 0.00 31.81 3.06
211 212 1.001815 CGCGGAAACAAAACCATGTCT 60.002 47.619 0.00 0.00 31.81 3.41
212 213 2.661594 GCGGAAACAAAACCATGTCTC 58.338 47.619 0.00 0.00 31.81 3.36
213 214 2.293399 GCGGAAACAAAACCATGTCTCT 59.707 45.455 0.00 0.00 31.81 3.10
214 215 3.609409 GCGGAAACAAAACCATGTCTCTC 60.609 47.826 0.00 0.00 31.81 3.20
215 216 3.363970 CGGAAACAAAACCATGTCTCTCG 60.364 47.826 0.00 0.00 31.81 4.04
216 217 3.555518 GAAACAAAACCATGTCTCTCGC 58.444 45.455 0.00 0.00 31.81 5.03
217 218 1.148310 ACAAAACCATGTCTCTCGCG 58.852 50.000 0.00 0.00 0.00 5.87
218 219 0.443869 CAAAACCATGTCTCTCGCGG 59.556 55.000 6.13 0.00 0.00 6.46
219 220 0.320374 AAAACCATGTCTCTCGCGGA 59.680 50.000 6.13 1.01 0.00 5.54
220 221 0.320374 AAACCATGTCTCTCGCGGAA 59.680 50.000 6.13 0.00 0.00 4.30
221 222 0.108615 AACCATGTCTCTCGCGGAAG 60.109 55.000 6.13 4.04 0.00 3.46
233 234 4.458164 CGGAAGCAAAATCGTGCC 57.542 55.556 0.00 0.00 46.14 5.01
234 235 1.875963 CGGAAGCAAAATCGTGCCT 59.124 52.632 0.00 0.00 46.14 4.75
235 236 0.240945 CGGAAGCAAAATCGTGCCTT 59.759 50.000 0.00 0.00 46.14 4.35
236 237 1.335872 CGGAAGCAAAATCGTGCCTTT 60.336 47.619 0.00 0.00 46.14 3.11
237 238 2.328473 GGAAGCAAAATCGTGCCTTTC 58.672 47.619 0.00 0.00 46.14 2.62
238 239 2.288152 GGAAGCAAAATCGTGCCTTTCA 60.288 45.455 0.00 0.00 46.14 2.69
239 240 2.422276 AGCAAAATCGTGCCTTTCAC 57.578 45.000 0.00 0.00 46.14 3.18
240 241 1.680735 AGCAAAATCGTGCCTTTCACA 59.319 42.857 0.00 0.00 46.14 3.58
241 242 2.100584 AGCAAAATCGTGCCTTTCACAA 59.899 40.909 0.00 0.00 46.14 3.33
242 243 2.863137 GCAAAATCGTGCCTTTCACAAA 59.137 40.909 0.00 0.00 45.92 2.83
243 244 3.308323 GCAAAATCGTGCCTTTCACAAAA 59.692 39.130 0.00 0.00 45.92 2.44
244 245 4.201763 GCAAAATCGTGCCTTTCACAAAAA 60.202 37.500 0.00 0.00 45.92 1.94
283 284 3.848272 TTTTCATTTCCAAGCTAGCGG 57.152 42.857 9.55 5.63 0.00 5.52
284 285 2.779755 TTCATTTCCAAGCTAGCGGA 57.220 45.000 9.55 8.25 0.00 5.54
285 286 2.779755 TCATTTCCAAGCTAGCGGAA 57.220 45.000 17.28 17.28 39.54 4.30
286 287 2.632377 TCATTTCCAAGCTAGCGGAAG 58.368 47.619 19.44 12.06 42.14 3.46
298 299 4.633980 CGGAAGCAAAACTGTGCC 57.366 55.556 0.00 0.00 46.14 5.01
299 300 2.032981 CGGAAGCAAAACTGTGCCT 58.967 52.632 0.00 0.00 46.14 4.75
300 301 0.040067 CGGAAGCAAAACTGTGCCTC 60.040 55.000 0.00 0.00 46.14 4.70
301 302 1.322442 GGAAGCAAAACTGTGCCTCT 58.678 50.000 0.00 0.00 46.14 3.69
302 303 1.268079 GGAAGCAAAACTGTGCCTCTC 59.732 52.381 0.00 0.00 46.14 3.20
303 304 0.947244 AAGCAAAACTGTGCCTCTCG 59.053 50.000 0.00 0.00 46.14 4.04
304 305 0.179045 AGCAAAACTGTGCCTCTCGT 60.179 50.000 0.00 0.00 46.14 4.18
305 306 0.040958 GCAAAACTGTGCCTCTCGTG 60.041 55.000 0.00 0.00 38.66 4.35
306 307 1.581934 CAAAACTGTGCCTCTCGTGA 58.418 50.000 0.00 0.00 0.00 4.35
307 308 1.939934 CAAAACTGTGCCTCTCGTGAA 59.060 47.619 0.00 0.00 0.00 3.18
308 309 2.325583 AAACTGTGCCTCTCGTGAAA 57.674 45.000 0.00 0.00 0.00 2.69
309 310 2.325583 AACTGTGCCTCTCGTGAAAA 57.674 45.000 0.00 0.00 0.00 2.29
310 311 2.325583 ACTGTGCCTCTCGTGAAAAA 57.674 45.000 0.00 0.00 0.00 1.94
349 350 4.232641 GTTTTCGAGAGTTACATCGCAG 57.767 45.455 5.34 0.00 38.79 5.18
350 351 3.842732 TTTCGAGAGTTACATCGCAGA 57.157 42.857 5.34 0.00 45.75 4.26
351 352 3.842732 TTCGAGAGTTACATCGCAGAA 57.157 42.857 5.34 0.00 43.58 3.02
352 353 3.132629 TCGAGAGTTACATCGCAGAAC 57.867 47.619 5.34 0.00 43.58 3.01
353 354 2.159421 TCGAGAGTTACATCGCAGAACC 60.159 50.000 5.34 0.00 43.58 3.62
354 355 2.415491 CGAGAGTTACATCGCAGAACCA 60.415 50.000 0.00 0.00 43.58 3.67
355 356 3.585862 GAGAGTTACATCGCAGAACCAA 58.414 45.455 0.00 0.00 43.58 3.67
356 357 3.994392 GAGAGTTACATCGCAGAACCAAA 59.006 43.478 0.00 0.00 43.58 3.28
357 358 4.385825 AGAGTTACATCGCAGAACCAAAA 58.614 39.130 0.00 0.00 43.58 2.44
358 359 4.213482 AGAGTTACATCGCAGAACCAAAAC 59.787 41.667 0.00 0.00 43.58 2.43
359 360 3.252458 AGTTACATCGCAGAACCAAAACC 59.748 43.478 0.00 0.00 43.58 3.27
360 361 0.591170 ACATCGCAGAACCAAAACCG 59.409 50.000 0.00 0.00 43.58 4.44
361 362 0.591170 CATCGCAGAACCAAAACCGT 59.409 50.000 0.00 0.00 43.58 4.83
362 363 0.591170 ATCGCAGAACCAAAACCGTG 59.409 50.000 0.00 0.00 43.58 4.94
363 364 1.657181 CGCAGAACCAAAACCGTGC 60.657 57.895 0.00 0.00 0.00 5.34
364 365 1.299850 GCAGAACCAAAACCGTGCC 60.300 57.895 0.00 0.00 0.00 5.01
365 366 1.734388 GCAGAACCAAAACCGTGCCT 61.734 55.000 0.00 0.00 0.00 4.75
366 367 0.310854 CAGAACCAAAACCGTGCCTC 59.689 55.000 0.00 0.00 0.00 4.70
367 368 0.182775 AGAACCAAAACCGTGCCTCT 59.817 50.000 0.00 0.00 0.00 3.69
368 369 0.591659 GAACCAAAACCGTGCCTCTC 59.408 55.000 0.00 0.00 0.00 3.20
369 370 1.164041 AACCAAAACCGTGCCTCTCG 61.164 55.000 0.00 0.00 0.00 4.04
370 371 2.556287 CAAAACCGTGCCTCTCGC 59.444 61.111 0.00 0.00 38.31 5.03
377 378 3.637714 GTGCCTCTCGCGAAAACA 58.362 55.556 11.33 3.24 42.08 2.83
378 379 1.938861 GTGCCTCTCGCGAAAACAA 59.061 52.632 11.33 0.00 42.08 2.83
379 380 0.306533 GTGCCTCTCGCGAAAACAAA 59.693 50.000 11.33 0.00 42.08 2.83
380 381 1.018148 TGCCTCTCGCGAAAACAAAA 58.982 45.000 11.33 0.00 42.08 2.44
381 382 1.268335 TGCCTCTCGCGAAAACAAAAC 60.268 47.619 11.33 0.00 42.08 2.43
382 383 1.924629 GCCTCTCGCGAAAACAAAACC 60.925 52.381 11.33 0.00 0.00 3.27
383 384 1.658968 CTCTCGCGAAAACAAAACCG 58.341 50.000 11.33 0.00 0.00 4.44
384 385 1.004292 CTCTCGCGAAAACAAAACCGT 60.004 47.619 11.33 0.00 0.00 4.83
385 386 1.109296 CTCGCGAAAACAAAACCGTG 58.891 50.000 11.33 0.00 0.00 4.94
386 387 0.862283 TCGCGAAAACAAAACCGTGC 60.862 50.000 6.20 0.00 33.21 5.34
387 388 1.803286 CGCGAAAACAAAACCGTGCC 61.803 55.000 0.00 0.00 0.00 5.01
388 389 0.526739 GCGAAAACAAAACCGTGCCT 60.527 50.000 0.00 0.00 0.00 4.75
389 390 1.472990 CGAAAACAAAACCGTGCCTC 58.527 50.000 0.00 0.00 0.00 4.70
390 391 1.064952 CGAAAACAAAACCGTGCCTCT 59.935 47.619 0.00 0.00 0.00 3.69
391 392 2.727777 GAAAACAAAACCGTGCCTCTC 58.272 47.619 0.00 0.00 0.00 3.20
392 393 1.757682 AAACAAAACCGTGCCTCTCA 58.242 45.000 0.00 0.00 0.00 3.27
393 394 1.021968 AACAAAACCGTGCCTCTCAC 58.978 50.000 0.00 0.00 42.23 3.51
394 395 0.107410 ACAAAACCGTGCCTCTCACA 60.107 50.000 0.00 0.00 45.92 3.58
395 396 1.021202 CAAAACCGTGCCTCTCACAA 58.979 50.000 0.00 0.00 45.92 3.33
396 397 1.403679 CAAAACCGTGCCTCTCACAAA 59.596 47.619 0.00 0.00 45.92 2.83
397 398 1.757682 AAACCGTGCCTCTCACAAAA 58.242 45.000 0.00 0.00 45.92 2.44
398 399 1.757682 AACCGTGCCTCTCACAAAAA 58.242 45.000 0.00 0.00 45.92 1.94
443 444 8.687824 TTTTGTCAAAAAGCTAAGAAAGACAG 57.312 30.769 8.31 0.00 36.31 3.51
444 445 6.377327 TGTCAAAAAGCTAAGAAAGACAGG 57.623 37.500 0.00 0.00 31.81 4.00
445 446 5.885912 TGTCAAAAAGCTAAGAAAGACAGGT 59.114 36.000 0.00 0.00 31.81 4.00
446 447 7.051623 TGTCAAAAAGCTAAGAAAGACAGGTA 58.948 34.615 0.00 0.00 31.81 3.08
447 448 7.226720 TGTCAAAAAGCTAAGAAAGACAGGTAG 59.773 37.037 0.00 0.00 31.81 3.18
448 449 7.441458 GTCAAAAAGCTAAGAAAGACAGGTAGA 59.559 37.037 0.00 0.00 0.00 2.59
449 450 7.990886 TCAAAAAGCTAAGAAAGACAGGTAGAA 59.009 33.333 0.00 0.00 0.00 2.10
450 451 8.621286 CAAAAAGCTAAGAAAGACAGGTAGAAA 58.379 33.333 0.00 0.00 0.00 2.52
451 452 8.747538 AAAAGCTAAGAAAGACAGGTAGAAAA 57.252 30.769 0.00 0.00 0.00 2.29
452 453 7.731882 AAGCTAAGAAAGACAGGTAGAAAAC 57.268 36.000 0.00 0.00 0.00 2.43
488 489 7.411486 AAAAACCCCCAAAACCATTAAAAAG 57.589 32.000 0.00 0.00 0.00 2.27
489 490 4.093472 ACCCCCAAAACCATTAAAAAGC 57.907 40.909 0.00 0.00 0.00 3.51
490 491 3.181438 ACCCCCAAAACCATTAAAAAGCC 60.181 43.478 0.00 0.00 0.00 4.35
491 492 3.070748 CCCCAAAACCATTAAAAAGCCG 58.929 45.455 0.00 0.00 0.00 5.52
492 493 3.244249 CCCCAAAACCATTAAAAAGCCGA 60.244 43.478 0.00 0.00 0.00 5.54
493 494 4.381411 CCCAAAACCATTAAAAAGCCGAA 58.619 39.130 0.00 0.00 0.00 4.30
494 495 4.816925 CCCAAAACCATTAAAAAGCCGAAA 59.183 37.500 0.00 0.00 0.00 3.46
495 496 5.297029 CCCAAAACCATTAAAAAGCCGAAAA 59.703 36.000 0.00 0.00 0.00 2.29
496 497 6.195868 CCAAAACCATTAAAAAGCCGAAAAC 58.804 36.000 0.00 0.00 0.00 2.43
497 498 6.183360 CCAAAACCATTAAAAAGCCGAAAACA 60.183 34.615 0.00 0.00 0.00 2.83
498 499 5.977171 AACCATTAAAAAGCCGAAAACAC 57.023 34.783 0.00 0.00 0.00 3.32
499 500 5.012328 ACCATTAAAAAGCCGAAAACACA 57.988 34.783 0.00 0.00 0.00 3.72
500 501 5.606505 ACCATTAAAAAGCCGAAAACACAT 58.393 33.333 0.00 0.00 0.00 3.21
501 502 5.465056 ACCATTAAAAAGCCGAAAACACATG 59.535 36.000 0.00 0.00 0.00 3.21
502 503 5.373262 CATTAAAAAGCCGAAAACACATGC 58.627 37.500 0.00 0.00 0.00 4.06
503 504 1.486439 AAAAGCCGAAAACACATGCG 58.514 45.000 0.00 0.00 0.00 4.73
504 505 0.665835 AAAGCCGAAAACACATGCGA 59.334 45.000 0.00 0.00 0.00 5.10
505 506 0.665835 AAGCCGAAAACACATGCGAA 59.334 45.000 0.00 0.00 0.00 4.70
506 507 0.665835 AGCCGAAAACACATGCGAAA 59.334 45.000 0.00 0.00 0.00 3.46
507 508 1.066303 AGCCGAAAACACATGCGAAAA 59.934 42.857 0.00 0.00 0.00 2.29
508 509 1.855360 GCCGAAAACACATGCGAAAAA 59.145 42.857 0.00 0.00 0.00 1.94
541 542 7.520119 AAAAACAAAATTCGAAGGAAGACAC 57.480 32.000 3.35 0.00 35.19 3.67
542 543 4.468095 ACAAAATTCGAAGGAAGACACG 57.532 40.909 3.35 0.00 35.19 4.49
543 544 3.875134 ACAAAATTCGAAGGAAGACACGT 59.125 39.130 3.35 0.00 35.19 4.49
544 545 4.211389 CAAAATTCGAAGGAAGACACGTG 58.789 43.478 15.48 15.48 35.19 4.49
545 546 2.080286 ATTCGAAGGAAGACACGTGG 57.920 50.000 21.57 1.66 35.19 4.94
546 547 0.599204 TTCGAAGGAAGACACGTGGC 60.599 55.000 21.57 18.79 0.00 5.01
547 548 2.372690 CGAAGGAAGACACGTGGCG 61.373 63.158 21.57 6.26 0.00 5.69
548 549 2.027625 GAAGGAAGACACGTGGCGG 61.028 63.158 21.57 0.00 0.00 6.13
549 550 4.681978 AGGAAGACACGTGGCGGC 62.682 66.667 21.57 14.15 0.00 6.53
567 568 3.131478 GGTTGGGCACGCGCTAAT 61.131 61.111 5.73 0.00 38.60 1.73
568 569 2.696759 GGTTGGGCACGCGCTAATT 61.697 57.895 5.73 0.00 38.60 1.40
569 570 1.514014 GTTGGGCACGCGCTAATTG 60.514 57.895 5.73 0.00 38.60 2.32
570 571 2.695759 TTGGGCACGCGCTAATTGG 61.696 57.895 5.73 0.00 38.60 3.16
571 572 4.552745 GGGCACGCGCTAATTGGC 62.553 66.667 5.73 9.11 38.60 4.52
572 573 3.809775 GGCACGCGCTAATTGGCA 61.810 61.111 14.59 0.00 38.60 4.92
573 574 2.408835 GCACGCGCTAATTGGCAT 59.591 55.556 14.59 0.00 34.30 4.40
574 575 1.940758 GCACGCGCTAATTGGCATG 60.941 57.895 14.59 9.55 34.30 4.06
575 576 1.940758 CACGCGCTAATTGGCATGC 60.941 57.895 14.59 9.90 0.00 4.06
576 577 2.114670 ACGCGCTAATTGGCATGCT 61.115 52.632 18.92 0.00 0.00 3.79
577 578 1.369689 CGCGCTAATTGGCATGCTC 60.370 57.895 18.92 8.46 0.00 4.26
578 579 1.779025 CGCGCTAATTGGCATGCTCT 61.779 55.000 18.92 2.17 0.00 4.09
579 580 1.229428 GCGCTAATTGGCATGCTCTA 58.771 50.000 18.92 5.22 0.00 2.43
580 581 1.603802 GCGCTAATTGGCATGCTCTAA 59.396 47.619 18.92 11.03 0.00 2.10
581 582 2.350197 GCGCTAATTGGCATGCTCTAAG 60.350 50.000 18.92 10.04 0.00 2.18
582 583 2.350197 CGCTAATTGGCATGCTCTAAGC 60.350 50.000 18.92 17.70 42.82 3.09
586 587 4.916358 GGCATGCTCTAAGCCCAT 57.084 55.556 18.92 0.00 41.51 4.00
587 588 2.638744 GGCATGCTCTAAGCCCATC 58.361 57.895 18.92 0.00 41.51 3.51
588 589 0.892814 GGCATGCTCTAAGCCCATCC 60.893 60.000 18.92 0.00 41.51 3.51
589 590 0.179009 GCATGCTCTAAGCCCATCCA 60.179 55.000 11.37 0.00 41.51 3.41
590 591 1.547223 GCATGCTCTAAGCCCATCCAT 60.547 52.381 11.37 0.00 41.51 3.41
591 592 2.160205 CATGCTCTAAGCCCATCCATG 58.840 52.381 0.00 0.00 41.51 3.66
592 593 1.216064 TGCTCTAAGCCCATCCATGT 58.784 50.000 0.00 0.00 41.51 3.21
593 594 2.407562 TGCTCTAAGCCCATCCATGTA 58.592 47.619 0.00 0.00 41.51 2.29
594 595 2.777114 TGCTCTAAGCCCATCCATGTAA 59.223 45.455 0.00 0.00 41.51 2.41
595 596 3.395607 TGCTCTAAGCCCATCCATGTAAT 59.604 43.478 0.00 0.00 41.51 1.89
596 597 4.006319 GCTCTAAGCCCATCCATGTAATC 58.994 47.826 0.00 0.00 34.48 1.75
597 598 4.248859 CTCTAAGCCCATCCATGTAATCG 58.751 47.826 0.00 0.00 0.00 3.34
598 599 3.646162 TCTAAGCCCATCCATGTAATCGT 59.354 43.478 0.00 0.00 0.00 3.73
599 600 3.297134 AAGCCCATCCATGTAATCGTT 57.703 42.857 0.00 0.00 0.00 3.85
600 601 2.575532 AGCCCATCCATGTAATCGTTG 58.424 47.619 0.00 0.00 0.00 4.10
601 602 1.608590 GCCCATCCATGTAATCGTTGG 59.391 52.381 0.00 0.00 0.00 3.77
602 603 2.748132 GCCCATCCATGTAATCGTTGGA 60.748 50.000 0.00 0.00 0.00 3.53
603 604 3.550820 CCCATCCATGTAATCGTTGGAA 58.449 45.455 0.00 0.00 31.92 3.53
604 605 3.565482 CCCATCCATGTAATCGTTGGAAG 59.435 47.826 0.00 0.00 31.92 3.46
605 606 3.565482 CCATCCATGTAATCGTTGGAAGG 59.435 47.826 0.00 0.00 32.30 3.46
606 607 2.639065 TCCATGTAATCGTTGGAAGGC 58.361 47.619 0.00 0.00 0.00 4.35
607 608 2.238646 TCCATGTAATCGTTGGAAGGCT 59.761 45.455 0.00 0.00 0.00 4.58
608 609 2.614057 CCATGTAATCGTTGGAAGGCTC 59.386 50.000 0.00 0.00 0.00 4.70
609 610 3.535561 CATGTAATCGTTGGAAGGCTCT 58.464 45.455 0.00 0.00 0.00 4.09
610 611 3.247006 TGTAATCGTTGGAAGGCTCTC 57.753 47.619 0.00 0.00 0.00 3.20
611 612 2.194271 GTAATCGTTGGAAGGCTCTCG 58.806 52.381 0.00 0.00 0.00 4.04
612 613 0.895530 AATCGTTGGAAGGCTCTCGA 59.104 50.000 0.00 0.00 0.00 4.04
613 614 0.895530 ATCGTTGGAAGGCTCTCGAA 59.104 50.000 0.00 0.00 0.00 3.71
614 615 0.243907 TCGTTGGAAGGCTCTCGAAG 59.756 55.000 0.00 0.00 0.00 3.79
615 616 0.737715 CGTTGGAAGGCTCTCGAAGG 60.738 60.000 0.00 0.00 0.00 3.46
616 617 0.608640 GTTGGAAGGCTCTCGAAGGA 59.391 55.000 0.00 0.00 0.00 3.36
617 618 1.002087 GTTGGAAGGCTCTCGAAGGAA 59.998 52.381 0.00 0.00 0.00 3.36
618 619 0.608640 TGGAAGGCTCTCGAAGGAAC 59.391 55.000 0.00 0.00 0.00 3.62
619 620 0.458716 GGAAGGCTCTCGAAGGAACG 60.459 60.000 0.00 0.00 0.00 3.95
620 621 1.079317 GAAGGCTCTCGAAGGAACGC 61.079 60.000 0.00 0.00 0.00 4.84
621 622 1.536943 AAGGCTCTCGAAGGAACGCT 61.537 55.000 0.00 0.00 0.00 5.07
622 623 0.680280 AGGCTCTCGAAGGAACGCTA 60.680 55.000 0.00 0.00 0.00 4.26
623 624 0.525882 GGCTCTCGAAGGAACGCTAC 60.526 60.000 0.00 0.00 0.00 3.58
624 625 0.452585 GCTCTCGAAGGAACGCTACT 59.547 55.000 0.00 0.00 0.00 2.57
625 626 1.532298 GCTCTCGAAGGAACGCTACTC 60.532 57.143 0.00 0.00 0.00 2.59
626 627 1.738350 CTCTCGAAGGAACGCTACTCA 59.262 52.381 0.00 0.00 0.00 3.41
627 628 2.156917 TCTCGAAGGAACGCTACTCAA 58.843 47.619 0.00 0.00 0.00 3.02
628 629 2.095364 TCTCGAAGGAACGCTACTCAAC 60.095 50.000 0.00 0.00 0.00 3.18
629 630 1.884579 TCGAAGGAACGCTACTCAACT 59.115 47.619 0.00 0.00 0.00 3.16
630 631 2.295349 TCGAAGGAACGCTACTCAACTT 59.705 45.455 0.00 0.00 0.00 2.66
631 632 2.408704 CGAAGGAACGCTACTCAACTTG 59.591 50.000 0.00 0.00 0.00 3.16
632 633 1.797025 AGGAACGCTACTCAACTTGC 58.203 50.000 0.00 0.00 0.00 4.01
633 634 1.344763 AGGAACGCTACTCAACTTGCT 59.655 47.619 0.00 0.00 0.00 3.91
634 635 2.561419 AGGAACGCTACTCAACTTGCTA 59.439 45.455 0.00 0.00 0.00 3.49
635 636 3.195825 AGGAACGCTACTCAACTTGCTAT 59.804 43.478 0.00 0.00 0.00 2.97
636 637 3.552294 GGAACGCTACTCAACTTGCTATC 59.448 47.826 0.00 0.00 0.00 2.08
637 638 2.798680 ACGCTACTCAACTTGCTATCG 58.201 47.619 0.00 0.00 0.00 2.92
638 639 2.422479 ACGCTACTCAACTTGCTATCGA 59.578 45.455 0.00 0.00 0.00 3.59
639 640 3.119602 ACGCTACTCAACTTGCTATCGAA 60.120 43.478 0.00 0.00 0.00 3.71
640 641 3.483922 CGCTACTCAACTTGCTATCGAAG 59.516 47.826 0.00 0.00 0.00 3.79
641 642 4.673441 GCTACTCAACTTGCTATCGAAGA 58.327 43.478 0.00 0.00 45.75 2.87
642 643 5.103000 GCTACTCAACTTGCTATCGAAGAA 58.897 41.667 0.00 0.00 43.58 2.52
667 668 9.614792 AAAACTAGTTGCTCTAGAAGAAAAGAA 57.385 29.630 9.34 0.00 46.53 2.52
776 781 2.182030 CTCTCCAACCCGTCGCTC 59.818 66.667 0.00 0.00 0.00 5.03
777 782 2.282958 TCTCCAACCCGTCGCTCT 60.283 61.111 0.00 0.00 0.00 4.09
778 783 2.182030 CTCCAACCCGTCGCTCTC 59.818 66.667 0.00 0.00 0.00 3.20
779 784 3.685214 CTCCAACCCGTCGCTCTCG 62.685 68.421 0.00 0.00 0.00 4.04
781 786 4.421479 CAACCCGTCGCTCTCGCT 62.421 66.667 0.00 0.00 35.26 4.93
905 911 2.050350 CCGTCCGTTAGGCTCTCCA 61.050 63.158 0.00 0.00 37.47 3.86
933 939 0.118346 TACCCACCACCACCATCTCT 59.882 55.000 0.00 0.00 0.00 3.10
946 952 1.134159 CCATCTCTCTCCCTGCTTTGG 60.134 57.143 0.00 0.00 0.00 3.28
947 953 1.558756 CATCTCTCTCCCTGCTTTGGT 59.441 52.381 0.00 0.00 0.00 3.67
949 955 1.625818 TCTCTCTCCCTGCTTTGGTTC 59.374 52.381 0.00 0.00 0.00 3.62
1055 1063 4.065110 GCTTGTTCGGAAGCAGGT 57.935 55.556 9.11 0.00 46.46 4.00
1121 1135 1.135527 CAAATCGGATGGCTGCAACAT 59.864 47.619 0.50 3.40 0.00 2.71
1172 1186 1.495951 CGTAGGTTTGCGGCACTTC 59.504 57.895 0.05 0.00 0.00 3.01
1277 1458 2.359107 ACTGCCATGCTGGTCGTG 60.359 61.111 4.45 0.00 40.46 4.35
1306 1487 9.538508 AATCTAAATGGAAATTCTATTTGCTGC 57.461 29.630 22.15 0.00 37.94 5.25
1391 1698 4.632251 TGTTGCATATAATGTCGTTTCCGT 59.368 37.500 0.00 0.00 35.01 4.69
1548 1855 8.985805 GTTGTAATAACGTCTTAGATTATGGGG 58.014 37.037 0.00 0.00 0.00 4.96
1564 1871 0.395686 GGGGCGGAGGGAGTAATAAC 59.604 60.000 0.00 0.00 0.00 1.89
1565 1872 0.395686 GGGCGGAGGGAGTAATAACC 59.604 60.000 0.00 0.00 0.00 2.85
1833 2148 0.322322 TTCCGTTCGGGCTAACATGT 59.678 50.000 11.37 0.00 34.94 3.21
1834 2149 1.184431 TCCGTTCGGGCTAACATGTA 58.816 50.000 11.37 0.00 34.94 2.29
1835 2150 1.135024 TCCGTTCGGGCTAACATGTAC 60.135 52.381 11.37 0.00 34.94 2.90
1836 2151 1.134907 CCGTTCGGGCTAACATGTACT 60.135 52.381 0.00 0.00 0.00 2.73
1837 2152 2.190981 CGTTCGGGCTAACATGTACTC 58.809 52.381 0.00 0.00 0.00 2.59
1838 2153 2.416296 CGTTCGGGCTAACATGTACTCA 60.416 50.000 0.00 0.00 0.00 3.41
1839 2154 3.737047 CGTTCGGGCTAACATGTACTCAT 60.737 47.826 0.00 0.00 34.21 2.90
1865 2180 4.233558 AAAAAGGGGCAGCCCGGT 62.234 61.111 25.18 11.58 46.66 5.28
1866 2181 4.994756 AAAAGGGGCAGCCCGGTG 62.995 66.667 25.18 0.00 46.66 4.94
1872 2187 4.794648 GGCAGCCCGGTGCATGTA 62.795 66.667 19.47 0.00 45.93 2.29
1873 2188 3.204827 GCAGCCCGGTGCATGTAG 61.205 66.667 13.70 0.91 43.41 2.74
1874 2189 3.204827 CAGCCCGGTGCATGTAGC 61.205 66.667 15.92 2.56 44.83 3.58
1875 2190 3.402681 AGCCCGGTGCATGTAGCT 61.403 61.111 15.92 4.82 45.94 3.32
1876 2191 2.897350 GCCCGGTGCATGTAGCTC 60.897 66.667 11.25 0.00 45.94 4.09
1882 2197 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
1883 2198 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
1884 2199 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
1885 2200 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
1888 2203 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
1903 2218 3.400054 CAGGGTCGGGGAAGGGTC 61.400 72.222 0.00 0.00 0.00 4.46
1904 2219 4.735599 AGGGTCGGGGAAGGGTCC 62.736 72.222 0.00 0.00 44.10 4.46
1910 2225 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
1911 2226 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
1912 2227 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
1913 2228 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
1914 2229 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
1915 2230 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
1916 2231 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
1917 2232 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
1927 2242 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
1928 2243 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
1929 2244 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
1930 2245 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
1931 2246 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
1932 2247 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
1933 2248 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
1934 2249 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
1935 2250 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
1936 2251 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
1937 2252 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
1938 2253 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
1939 2254 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
1940 2255 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
1941 2256 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
1942 2257 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
1943 2258 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
1944 2259 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
1945 2260 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
1946 2261 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
1947 2262 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
1948 2263 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
1949 2264 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
1950 2265 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
1951 2266 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
1952 2267 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
1953 2268 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
1965 2280 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
1966 2281 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
1967 2282 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
1968 2283 2.912956 TGTAAGAGGCTGTTTCCAGGAT 59.087 45.455 0.90 0.00 39.22 3.24
1969 2284 3.330701 TGTAAGAGGCTGTTTCCAGGATT 59.669 43.478 0.90 0.00 39.22 3.01
1970 2285 3.532641 AAGAGGCTGTTTCCAGGATTT 57.467 42.857 0.00 0.00 39.22 2.17
1971 2286 2.800250 AGAGGCTGTTTCCAGGATTTG 58.200 47.619 0.00 0.00 39.22 2.32
1972 2287 2.376518 AGAGGCTGTTTCCAGGATTTGA 59.623 45.455 0.00 0.00 39.22 2.69
1973 2288 3.157087 GAGGCTGTTTCCAGGATTTGAA 58.843 45.455 0.00 0.00 39.22 2.69
1974 2289 2.893489 AGGCTGTTTCCAGGATTTGAAC 59.107 45.455 0.00 0.00 39.22 3.18
1975 2290 2.029020 GGCTGTTTCCAGGATTTGAACC 60.029 50.000 0.00 0.00 39.22 3.62
1976 2291 2.029020 GCTGTTTCCAGGATTTGAACCC 60.029 50.000 0.00 0.00 39.22 4.11
1977 2292 2.228822 CTGTTTCCAGGATTTGAACCCG 59.771 50.000 0.00 0.00 34.90 5.28
1978 2293 2.235891 GTTTCCAGGATTTGAACCCGT 58.764 47.619 0.00 0.00 0.00 5.28
1979 2294 1.904287 TTCCAGGATTTGAACCCGTG 58.096 50.000 0.00 0.00 0.00 4.94
1980 2295 1.060729 TCCAGGATTTGAACCCGTGA 58.939 50.000 0.00 0.00 0.00 4.35
1981 2296 1.165270 CCAGGATTTGAACCCGTGAC 58.835 55.000 0.00 0.00 0.00 3.67
1982 2297 1.165270 CAGGATTTGAACCCGTGACC 58.835 55.000 0.00 0.00 0.00 4.02
1983 2298 1.064825 AGGATTTGAACCCGTGACCT 58.935 50.000 0.00 0.00 0.00 3.85
1984 2299 1.003233 AGGATTTGAACCCGTGACCTC 59.997 52.381 0.00 0.00 0.00 3.85
1985 2300 1.271163 GGATTTGAACCCGTGACCTCA 60.271 52.381 0.00 0.00 0.00 3.86
1986 2301 2.618045 GGATTTGAACCCGTGACCTCAT 60.618 50.000 0.00 0.00 0.00 2.90
1987 2302 1.890876 TTTGAACCCGTGACCTCATG 58.109 50.000 0.00 0.00 0.00 3.07
1998 2313 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
1999 2314 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
2000 2315 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
2001 2316 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
2002 2317 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
2003 2318 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
2004 2319 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
2005 2320 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
2006 2321 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
2007 2322 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
2008 2323 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
2009 2324 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
2010 2325 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
2011 2326 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
2012 2327 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
2013 2328 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
2017 2332 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
2018 2333 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
2019 2334 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
2020 2335 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
2021 2336 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
2022 2337 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
2023 2338 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
2024 2339 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
2457 2776 9.160496 ACAACAAATACAAAACATGTTTGACAT 57.840 25.926 23.93 13.75 43.63 3.06
2608 2936 1.098869 TGCGAAAAAGTGACAGCCAA 58.901 45.000 0.00 0.00 0.00 4.52
2621 2949 3.197265 GACAGCCAATGTTGCAAAAAGT 58.803 40.909 0.00 0.00 44.17 2.66
2804 3132 0.527565 AAATCATCAGCCGCACCAAC 59.472 50.000 0.00 0.00 0.00 3.77
3059 3394 2.945008 TCTTGTTGCAGTGAACAGGAAG 59.055 45.455 13.79 7.84 38.56 3.46
3295 3630 5.483937 ACTTCCCCTTTTCAAAAGAAACAGT 59.516 36.000 11.73 5.39 0.00 3.55
3312 3647 7.715657 AGAAACAGTGTCTTTGCAAAATGATA 58.284 30.769 13.84 3.63 0.00 2.15
3605 3940 4.889832 AAACAGTCAACTCAGAGCTTTG 57.110 40.909 0.00 0.00 0.00 2.77
3607 3942 1.534595 CAGTCAACTCAGAGCTTTGGC 59.465 52.381 4.15 0.00 39.06 4.52
3619 3954 7.605691 ACTCAGAGCTTTGGCATATTATGATAC 59.394 37.037 7.87 0.00 41.70 2.24
3637 3972 0.388649 ACCGATGACTGTTCAGACGC 60.389 55.000 6.83 0.00 35.50 5.19
3642 3977 1.007734 GACTGTTCAGACGCGGACA 60.008 57.895 12.47 6.22 0.00 4.02
3673 4008 2.417719 CTTAGGGAGTGTCAACTGCAC 58.582 52.381 0.00 0.00 46.04 4.57
3674 4009 1.717032 TAGGGAGTGTCAACTGCACT 58.283 50.000 6.52 6.52 46.04 4.40
3698 4033 5.857283 TGGGGATAATGATTTCATACTCCCT 59.143 40.000 25.05 3.91 46.29 4.20
3722 4057 8.265055 CCTGAGACCAACTATTTCCACTATAAA 58.735 37.037 0.00 0.00 0.00 1.40
3762 4097 5.654603 TGAGCCTTGTTCTTCGAATAGTA 57.345 39.130 0.00 0.00 0.00 1.82
3936 4271 3.004752 ACAGAGACAACCTTGCTTTGT 57.995 42.857 0.00 0.00 39.94 2.83
4066 4401 9.474313 AATTTTGGATAAATGGCTACTTGTAGA 57.526 29.630 11.54 0.00 0.00 2.59
4084 4419 0.038526 GAGAACGGCGAAGTGGAAGA 60.039 55.000 16.62 0.00 0.00 2.87
4134 4469 2.930950 TGGTTTCTGAAGGTCCACAAG 58.069 47.619 0.00 0.00 0.00 3.16
4152 4487 0.971959 AGGTACGTTGCGGGGTATCA 60.972 55.000 0.00 0.00 0.00 2.15
4178 4513 3.773560 AGCTTCTCTGTTGTCCTACTCT 58.226 45.455 0.00 0.00 0.00 3.24
4346 4681 2.351738 CCAATTTGCCGAGAAGGTTGTC 60.352 50.000 0.00 0.00 43.70 3.18
4397 4733 9.376075 CATGTACAGTATGATTCTCTTTGAGTT 57.624 33.333 0.33 0.00 39.69 3.01
4446 4782 0.821301 TTCCGCAGTTGCATTGACCA 60.821 50.000 4.84 0.00 42.21 4.02
4626 4962 4.727507 ATCTCGTGATATACTGGCCATC 57.272 45.455 5.51 0.00 0.00 3.51
4629 4965 3.089284 TCGTGATATACTGGCCATCGAT 58.911 45.455 5.51 2.24 0.00 3.59
4787 5123 5.535406 TGTTTGACGGGCCTAAATTTAGAAA 59.465 36.000 23.95 12.64 32.47 2.52
4798 5134 8.856247 GGCCTAAATTTAGAAAACACGTATTTG 58.144 33.333 23.95 5.60 32.47 2.32
4803 5139 7.810766 ATTTAGAAAACACGTATTTGCCATG 57.189 32.000 0.00 0.00 0.00 3.66
4881 5217 4.514401 AGTAGTAAATAAGTGCAGGCCAC 58.486 43.478 5.01 0.00 45.01 5.01
4929 5265 4.057428 GCTCTCCGCTGTGTCCGT 62.057 66.667 0.00 0.00 35.14 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.751518 ACATGCTCCTAGTTCGGTTTTT 58.248 40.909 0.00 0.00 0.00 1.94
24 25 3.418684 ACATGCTCCTAGTTCGGTTTT 57.581 42.857 0.00 0.00 0.00 2.43
25 26 4.755266 ATACATGCTCCTAGTTCGGTTT 57.245 40.909 0.00 0.00 0.00 3.27
26 27 4.755266 AATACATGCTCCTAGTTCGGTT 57.245 40.909 0.00 0.00 0.00 4.44
27 28 4.755266 AAATACATGCTCCTAGTTCGGT 57.245 40.909 0.00 0.00 0.00 4.69
28 29 5.007724 GGAAAAATACATGCTCCTAGTTCGG 59.992 44.000 0.00 0.00 0.00 4.30
29 30 5.817816 AGGAAAAATACATGCTCCTAGTTCG 59.182 40.000 0.00 0.00 34.69 3.95
30 31 7.631717 AAGGAAAAATACATGCTCCTAGTTC 57.368 36.000 0.00 0.00 35.41 3.01
31 32 8.422577 AAAAGGAAAAATACATGCTCCTAGTT 57.577 30.769 0.00 0.00 35.41 2.24
32 33 8.306761 CAAAAAGGAAAAATACATGCTCCTAGT 58.693 33.333 0.00 0.00 35.41 2.57
33 34 7.761249 CCAAAAAGGAAAAATACATGCTCCTAG 59.239 37.037 0.00 0.00 41.22 3.02
34 35 7.234577 ACCAAAAAGGAAAAATACATGCTCCTA 59.765 33.333 0.00 0.00 41.22 2.94
35 36 6.043127 ACCAAAAAGGAAAAATACATGCTCCT 59.957 34.615 0.00 0.00 41.22 3.69
36 37 6.230472 ACCAAAAAGGAAAAATACATGCTCC 58.770 36.000 0.00 0.00 41.22 4.70
37 38 7.063426 GCTACCAAAAAGGAAAAATACATGCTC 59.937 37.037 0.00 0.00 41.22 4.26
38 39 6.873605 GCTACCAAAAAGGAAAAATACATGCT 59.126 34.615 0.00 0.00 41.22 3.79
39 40 6.092122 GGCTACCAAAAAGGAAAAATACATGC 59.908 38.462 0.00 0.00 41.22 4.06
40 41 7.158021 TGGCTACCAAAAAGGAAAAATACATG 58.842 34.615 0.00 0.00 41.22 3.21
41 42 7.309770 TGGCTACCAAAAAGGAAAAATACAT 57.690 32.000 0.00 0.00 41.22 2.29
42 43 6.732896 TGGCTACCAAAAAGGAAAAATACA 57.267 33.333 0.00 0.00 41.22 2.29
43 44 8.615878 AAATGGCTACCAAAAAGGAAAAATAC 57.384 30.769 0.00 0.00 41.22 1.89
44 45 7.880713 GGAAATGGCTACCAAAAAGGAAAAATA 59.119 33.333 0.00 0.00 41.22 1.40
45 46 6.714810 GGAAATGGCTACCAAAAAGGAAAAAT 59.285 34.615 0.00 0.00 41.22 1.82
46 47 6.058833 GGAAATGGCTACCAAAAAGGAAAAA 58.941 36.000 0.00 0.00 41.22 1.94
47 48 5.616270 GGAAATGGCTACCAAAAAGGAAAA 58.384 37.500 0.00 0.00 41.22 2.29
48 49 4.262249 CGGAAATGGCTACCAAAAAGGAAA 60.262 41.667 0.00 0.00 41.22 3.13
49 50 3.257127 CGGAAATGGCTACCAAAAAGGAA 59.743 43.478 0.00 0.00 41.22 3.36
50 51 2.823154 CGGAAATGGCTACCAAAAAGGA 59.177 45.455 0.00 0.00 41.22 3.36
51 52 2.823154 TCGGAAATGGCTACCAAAAAGG 59.177 45.455 0.00 0.00 45.67 3.11
52 53 3.756434 TCTCGGAAATGGCTACCAAAAAG 59.244 43.478 0.00 0.00 36.95 2.27
53 54 3.756434 CTCTCGGAAATGGCTACCAAAAA 59.244 43.478 0.00 0.00 36.95 1.94
54 55 3.343617 CTCTCGGAAATGGCTACCAAAA 58.656 45.455 0.00 0.00 36.95 2.44
55 56 2.355716 CCTCTCGGAAATGGCTACCAAA 60.356 50.000 0.00 0.00 36.95 3.28
56 57 1.209504 CCTCTCGGAAATGGCTACCAA 59.790 52.381 0.00 0.00 36.95 3.67
57 58 0.830648 CCTCTCGGAAATGGCTACCA 59.169 55.000 0.00 0.00 38.19 3.25
58 59 0.533085 GCCTCTCGGAAATGGCTACC 60.533 60.000 7.91 0.00 41.92 3.18
59 60 0.178068 TGCCTCTCGGAAATGGCTAC 59.822 55.000 13.94 0.00 45.11 3.58
60 61 0.178068 GTGCCTCTCGGAAATGGCTA 59.822 55.000 13.94 0.00 45.11 3.93
61 62 1.078143 GTGCCTCTCGGAAATGGCT 60.078 57.895 13.94 0.00 45.11 4.75
62 63 2.464459 CGTGCCTCTCGGAAATGGC 61.464 63.158 8.15 8.15 45.10 4.40
63 64 3.799753 CGTGCCTCTCGGAAATGG 58.200 61.111 0.00 0.00 0.00 3.16
69 70 3.905678 CTAGCCCGTGCCTCTCGG 61.906 72.222 0.00 0.00 46.49 4.63
70 71 4.577246 GCTAGCCCGTGCCTCTCG 62.577 72.222 2.29 0.00 38.69 4.04
71 72 4.577246 CGCTAGCCCGTGCCTCTC 62.577 72.222 9.66 0.00 38.69 3.20
73 74 3.659089 TTTCGCTAGCCCGTGCCTC 62.659 63.158 9.66 0.00 38.69 4.70
74 75 3.665675 CTTTCGCTAGCCCGTGCCT 62.666 63.158 9.66 0.00 38.69 4.75
75 76 2.567564 TACTTTCGCTAGCCCGTGCC 62.568 60.000 9.66 0.00 38.69 5.01
76 77 0.738412 TTACTTTCGCTAGCCCGTGC 60.738 55.000 9.66 0.00 37.95 5.34
77 78 1.717194 TTTACTTTCGCTAGCCCGTG 58.283 50.000 9.66 0.00 0.00 4.94
78 79 2.685850 ATTTACTTTCGCTAGCCCGT 57.314 45.000 9.66 3.73 0.00 5.28
79 80 2.933906 TGAATTTACTTTCGCTAGCCCG 59.066 45.455 9.66 0.00 0.00 6.13
80 81 4.789802 GCATGAATTTACTTTCGCTAGCCC 60.790 45.833 9.66 0.00 0.00 5.19
81 82 4.282873 GCATGAATTTACTTTCGCTAGCC 58.717 43.478 9.66 0.00 0.00 3.93
82 83 4.035675 AGGCATGAATTTACTTTCGCTAGC 59.964 41.667 4.06 4.06 0.00 3.42
83 84 5.277538 GGAGGCATGAATTTACTTTCGCTAG 60.278 44.000 0.00 0.00 0.00 3.42
84 85 4.574828 GGAGGCATGAATTTACTTTCGCTA 59.425 41.667 0.00 0.00 0.00 4.26
85 86 3.378427 GGAGGCATGAATTTACTTTCGCT 59.622 43.478 0.00 0.00 0.00 4.93
86 87 3.489229 GGGAGGCATGAATTTACTTTCGC 60.489 47.826 0.00 0.00 0.00 4.70
87 88 3.242739 CGGGAGGCATGAATTTACTTTCG 60.243 47.826 0.00 0.00 0.00 3.46
88 89 4.292977 CGGGAGGCATGAATTTACTTTC 57.707 45.455 0.00 0.00 0.00 2.62
104 105 1.305219 TGCGATTTTGCTTCCGGGAG 61.305 55.000 4.95 4.95 35.36 4.30
105 106 1.302913 TGCGATTTTGCTTCCGGGA 60.303 52.632 0.00 0.00 35.36 5.14
106 107 1.154035 GTGCGATTTTGCTTCCGGG 60.154 57.895 0.00 0.00 35.36 5.73
107 108 1.154035 GGTGCGATTTTGCTTCCGG 60.154 57.895 0.00 0.00 35.36 5.14
108 109 0.179189 GAGGTGCGATTTTGCTTCCG 60.179 55.000 0.00 0.00 35.72 4.30
109 110 1.168714 AGAGGTGCGATTTTGCTTCC 58.831 50.000 0.00 0.00 35.36 3.46
110 111 2.997485 AAGAGGTGCGATTTTGCTTC 57.003 45.000 0.00 0.00 35.36 3.86
111 112 3.146066 TGTAAGAGGTGCGATTTTGCTT 58.854 40.909 0.00 0.00 35.36 3.91
112 113 2.778299 TGTAAGAGGTGCGATTTTGCT 58.222 42.857 0.00 0.00 35.36 3.91
113 114 3.552604 TTGTAAGAGGTGCGATTTTGC 57.447 42.857 0.00 0.00 0.00 3.68
157 158 2.311463 TGCCACTCGGAAATGGAAAAA 58.689 42.857 11.24 0.00 38.34 1.94
158 159 1.988293 TGCCACTCGGAAATGGAAAA 58.012 45.000 11.24 0.00 38.34 2.29
159 160 2.091541 GATGCCACTCGGAAATGGAAA 58.908 47.619 11.24 0.64 38.34 3.13
160 161 1.004161 TGATGCCACTCGGAAATGGAA 59.996 47.619 11.24 2.06 38.34 3.53
161 162 0.617935 TGATGCCACTCGGAAATGGA 59.382 50.000 11.24 0.00 38.34 3.41
162 163 1.605710 GATGATGCCACTCGGAAATGG 59.394 52.381 4.01 4.01 39.16 3.16
163 164 2.291365 TGATGATGCCACTCGGAAATG 58.709 47.619 0.00 0.00 0.00 2.32
164 165 2.715749 TGATGATGCCACTCGGAAAT 57.284 45.000 0.00 0.00 0.00 2.17
165 166 2.291365 CATGATGATGCCACTCGGAAA 58.709 47.619 0.00 0.00 0.00 3.13
166 167 1.957668 CATGATGATGCCACTCGGAA 58.042 50.000 0.00 0.00 0.00 4.30
167 168 3.692424 CATGATGATGCCACTCGGA 57.308 52.632 0.00 0.00 0.00 4.55
176 177 1.289800 CCGCGAGAGGCATGATGATG 61.290 60.000 8.23 0.00 43.84 3.07
177 178 1.005275 CCGCGAGAGGCATGATGAT 60.005 57.895 8.23 0.00 43.84 2.45
178 179 1.675720 TTCCGCGAGAGGCATGATGA 61.676 55.000 8.23 0.00 43.84 2.92
179 180 0.811219 TTTCCGCGAGAGGCATGATG 60.811 55.000 8.23 0.00 43.84 3.07
180 181 0.811616 GTTTCCGCGAGAGGCATGAT 60.812 55.000 8.23 0.00 43.84 2.45
181 182 1.447838 GTTTCCGCGAGAGGCATGA 60.448 57.895 8.23 0.00 43.84 3.07
182 183 1.298157 TTGTTTCCGCGAGAGGCATG 61.298 55.000 8.23 0.00 43.84 4.06
183 184 0.605319 TTTGTTTCCGCGAGAGGCAT 60.605 50.000 8.23 0.00 43.84 4.40
184 185 0.816018 TTTTGTTTCCGCGAGAGGCA 60.816 50.000 8.23 3.54 43.84 4.75
185 186 0.385598 GTTTTGTTTCCGCGAGAGGC 60.386 55.000 8.23 0.85 38.69 4.70
186 187 0.237498 GGTTTTGTTTCCGCGAGAGG 59.763 55.000 8.23 0.00 0.00 3.69
187 188 0.941542 TGGTTTTGTTTCCGCGAGAG 59.058 50.000 8.23 0.00 0.00 3.20
188 189 1.265635 CATGGTTTTGTTTCCGCGAGA 59.734 47.619 8.23 0.00 0.00 4.04
189 190 1.001815 ACATGGTTTTGTTTCCGCGAG 60.002 47.619 8.23 0.00 0.00 5.03
190 191 1.002251 GACATGGTTTTGTTTCCGCGA 60.002 47.619 8.23 0.00 0.00 5.87
191 192 1.001815 AGACATGGTTTTGTTTCCGCG 60.002 47.619 0.00 0.00 0.00 6.46
192 193 2.293399 AGAGACATGGTTTTGTTTCCGC 59.707 45.455 0.00 0.00 32.61 5.54
193 194 3.363970 CGAGAGACATGGTTTTGTTTCCG 60.364 47.826 0.00 0.00 32.61 4.30
194 195 3.609409 GCGAGAGACATGGTTTTGTTTCC 60.609 47.826 0.00 0.00 32.61 3.13
195 196 3.555518 GCGAGAGACATGGTTTTGTTTC 58.444 45.455 0.00 0.00 32.42 2.78
196 197 2.032030 CGCGAGAGACATGGTTTTGTTT 60.032 45.455 0.00 0.00 0.00 2.83
197 198 1.531149 CGCGAGAGACATGGTTTTGTT 59.469 47.619 0.00 0.00 0.00 2.83
198 199 1.148310 CGCGAGAGACATGGTTTTGT 58.852 50.000 0.00 0.00 0.00 2.83
199 200 0.443869 CCGCGAGAGACATGGTTTTG 59.556 55.000 8.23 0.00 0.00 2.44
200 201 0.320374 TCCGCGAGAGACATGGTTTT 59.680 50.000 8.23 0.00 0.00 2.43
201 202 0.320374 TTCCGCGAGAGACATGGTTT 59.680 50.000 8.23 0.00 0.00 3.27
202 203 0.108615 CTTCCGCGAGAGACATGGTT 60.109 55.000 8.23 0.00 0.00 3.67
203 204 1.513158 CTTCCGCGAGAGACATGGT 59.487 57.895 8.23 0.00 0.00 3.55
204 205 1.880340 GCTTCCGCGAGAGACATGG 60.880 63.158 8.23 0.00 0.00 3.66
205 206 0.737367 TTGCTTCCGCGAGAGACATG 60.737 55.000 8.23 0.00 39.65 3.21
206 207 0.037326 TTTGCTTCCGCGAGAGACAT 60.037 50.000 8.23 0.00 39.65 3.06
207 208 0.249699 TTTTGCTTCCGCGAGAGACA 60.250 50.000 8.23 4.81 39.65 3.41
208 209 1.061276 GATTTTGCTTCCGCGAGAGAC 59.939 52.381 8.23 2.16 39.65 3.36
209 210 1.359848 GATTTTGCTTCCGCGAGAGA 58.640 50.000 8.23 0.00 39.65 3.10
210 211 0.025513 CGATTTTGCTTCCGCGAGAG 59.974 55.000 8.23 5.93 39.65 3.20
211 212 0.669318 ACGATTTTGCTTCCGCGAGA 60.669 50.000 8.23 0.00 39.65 4.04
212 213 0.519175 CACGATTTTGCTTCCGCGAG 60.519 55.000 8.23 0.00 39.65 5.03
213 214 1.495509 CACGATTTTGCTTCCGCGA 59.504 52.632 8.23 0.00 39.65 5.87
214 215 2.145905 GCACGATTTTGCTTCCGCG 61.146 57.895 0.00 0.00 39.59 6.46
215 216 1.801512 GGCACGATTTTGCTTCCGC 60.802 57.895 0.00 0.00 42.56 5.54
216 217 0.240945 AAGGCACGATTTTGCTTCCG 59.759 50.000 0.00 0.00 42.56 4.30
217 218 2.288152 TGAAAGGCACGATTTTGCTTCC 60.288 45.455 0.00 0.00 42.56 3.46
218 219 2.726241 GTGAAAGGCACGATTTTGCTTC 59.274 45.455 0.00 0.00 42.56 3.86
219 220 2.742774 GTGAAAGGCACGATTTTGCTT 58.257 42.857 0.00 0.00 42.56 3.91
220 221 2.422276 GTGAAAGGCACGATTTTGCT 57.578 45.000 0.00 0.00 42.56 3.91
262 263 3.823873 TCCGCTAGCTTGGAAATGAAAAA 59.176 39.130 13.93 0.00 0.00 1.94
263 264 3.417101 TCCGCTAGCTTGGAAATGAAAA 58.583 40.909 13.93 0.00 0.00 2.29
264 265 3.066291 TCCGCTAGCTTGGAAATGAAA 57.934 42.857 13.93 0.00 0.00 2.69
265 266 2.779755 TCCGCTAGCTTGGAAATGAA 57.220 45.000 13.93 0.00 0.00 2.57
266 267 2.632377 CTTCCGCTAGCTTGGAAATGA 58.368 47.619 20.39 3.80 43.35 2.57
267 268 1.064654 GCTTCCGCTAGCTTGGAAATG 59.935 52.381 20.39 13.18 43.35 2.32
268 269 1.340017 TGCTTCCGCTAGCTTGGAAAT 60.340 47.619 20.39 0.00 43.35 2.17
269 270 0.036164 TGCTTCCGCTAGCTTGGAAA 59.964 50.000 20.39 8.15 43.35 3.13
270 271 0.036164 TTGCTTCCGCTAGCTTGGAA 59.964 50.000 19.29 19.29 41.83 3.53
271 272 0.036164 TTTGCTTCCGCTAGCTTGGA 59.964 50.000 13.93 10.29 41.76 3.53
272 273 0.881118 TTTTGCTTCCGCTAGCTTGG 59.119 50.000 13.93 7.79 41.76 3.61
273 274 1.537202 AGTTTTGCTTCCGCTAGCTTG 59.463 47.619 13.93 3.85 41.76 4.01
274 275 1.537202 CAGTTTTGCTTCCGCTAGCTT 59.463 47.619 13.93 0.00 41.76 3.74
275 276 1.160137 CAGTTTTGCTTCCGCTAGCT 58.840 50.000 13.93 0.00 41.76 3.32
276 277 0.875059 ACAGTTTTGCTTCCGCTAGC 59.125 50.000 4.06 4.06 41.59 3.42
277 278 1.400242 GCACAGTTTTGCTTCCGCTAG 60.400 52.381 0.00 0.00 39.59 3.42
278 279 0.591170 GCACAGTTTTGCTTCCGCTA 59.409 50.000 0.00 0.00 39.59 4.26
279 280 1.360192 GCACAGTTTTGCTTCCGCT 59.640 52.632 0.00 0.00 39.59 5.52
280 281 1.661509 GGCACAGTTTTGCTTCCGC 60.662 57.895 0.00 0.00 42.56 5.54
281 282 0.040067 GAGGCACAGTTTTGCTTCCG 60.040 55.000 0.00 0.00 41.54 4.30
282 283 1.268079 GAGAGGCACAGTTTTGCTTCC 59.732 52.381 3.83 0.00 46.96 3.46
283 284 1.069636 CGAGAGGCACAGTTTTGCTTC 60.070 52.381 0.00 0.00 46.31 3.86
284 285 0.947244 CGAGAGGCACAGTTTTGCTT 59.053 50.000 0.00 0.00 42.56 3.91
285 286 0.179045 ACGAGAGGCACAGTTTTGCT 60.179 50.000 0.00 0.00 42.56 3.91
286 287 0.040958 CACGAGAGGCACAGTTTTGC 60.041 55.000 0.00 0.00 42.18 3.68
287 288 1.581934 TCACGAGAGGCACAGTTTTG 58.418 50.000 0.00 0.00 0.00 2.44
288 289 2.325583 TTCACGAGAGGCACAGTTTT 57.674 45.000 0.00 0.00 0.00 2.43
289 290 2.325583 TTTCACGAGAGGCACAGTTT 57.674 45.000 0.00 0.00 0.00 2.66
290 291 2.325583 TTTTCACGAGAGGCACAGTT 57.674 45.000 0.00 0.00 0.00 3.16
291 292 2.325583 TTTTTCACGAGAGGCACAGT 57.674 45.000 0.00 0.00 0.00 3.55
322 323 6.349426 CGATGTAACTCTCGAAAACGAAAAA 58.651 36.000 0.00 0.00 37.05 1.94
323 324 5.610982 GCGATGTAACTCTCGAAAACGAAAA 60.611 40.000 0.00 0.00 37.05 2.29
324 325 4.143473 GCGATGTAACTCTCGAAAACGAAA 60.143 41.667 0.00 0.00 37.05 3.46
325 326 3.362831 GCGATGTAACTCTCGAAAACGAA 59.637 43.478 0.00 0.00 37.05 3.85
326 327 2.912967 GCGATGTAACTCTCGAAAACGA 59.087 45.455 0.00 0.00 37.05 3.85
327 328 2.659757 TGCGATGTAACTCTCGAAAACG 59.340 45.455 0.00 0.00 37.05 3.60
328 329 3.918591 TCTGCGATGTAACTCTCGAAAAC 59.081 43.478 0.00 0.00 37.05 2.43
329 330 4.168922 TCTGCGATGTAACTCTCGAAAA 57.831 40.909 0.00 0.00 37.05 2.29
330 331 3.842732 TCTGCGATGTAACTCTCGAAA 57.157 42.857 0.00 0.00 37.05 3.46
331 332 3.499048 GTTCTGCGATGTAACTCTCGAA 58.501 45.455 0.00 0.00 37.05 3.71
332 333 2.159421 GGTTCTGCGATGTAACTCTCGA 60.159 50.000 0.00 0.00 37.05 4.04
333 334 2.186076 GGTTCTGCGATGTAACTCTCG 58.814 52.381 0.00 0.00 37.92 4.04
334 335 3.232213 TGGTTCTGCGATGTAACTCTC 57.768 47.619 0.00 0.00 0.00 3.20
335 336 3.678056 TTGGTTCTGCGATGTAACTCT 57.322 42.857 0.00 0.00 0.00 3.24
336 337 4.464112 GTTTTGGTTCTGCGATGTAACTC 58.536 43.478 0.00 0.00 0.00 3.01
337 338 3.252458 GGTTTTGGTTCTGCGATGTAACT 59.748 43.478 0.00 0.00 0.00 2.24
338 339 3.561503 GGTTTTGGTTCTGCGATGTAAC 58.438 45.455 0.00 0.00 0.00 2.50
339 340 2.224549 CGGTTTTGGTTCTGCGATGTAA 59.775 45.455 0.00 0.00 0.00 2.41
340 341 1.801771 CGGTTTTGGTTCTGCGATGTA 59.198 47.619 0.00 0.00 0.00 2.29
341 342 0.591170 CGGTTTTGGTTCTGCGATGT 59.409 50.000 0.00 0.00 0.00 3.06
342 343 0.591170 ACGGTTTTGGTTCTGCGATG 59.409 50.000 0.00 0.00 0.00 3.84
343 344 0.591170 CACGGTTTTGGTTCTGCGAT 59.409 50.000 0.00 0.00 0.00 4.58
344 345 2.018544 CACGGTTTTGGTTCTGCGA 58.981 52.632 0.00 0.00 0.00 5.10
345 346 1.657181 GCACGGTTTTGGTTCTGCG 60.657 57.895 0.00 0.00 0.00 5.18
346 347 1.299850 GGCACGGTTTTGGTTCTGC 60.300 57.895 0.00 0.00 0.00 4.26
347 348 0.310854 GAGGCACGGTTTTGGTTCTG 59.689 55.000 0.00 0.00 0.00 3.02
348 349 0.182775 AGAGGCACGGTTTTGGTTCT 59.817 50.000 0.00 0.00 0.00 3.01
349 350 0.591659 GAGAGGCACGGTTTTGGTTC 59.408 55.000 0.00 0.00 0.00 3.62
350 351 1.164041 CGAGAGGCACGGTTTTGGTT 61.164 55.000 0.00 0.00 0.00 3.67
351 352 1.597027 CGAGAGGCACGGTTTTGGT 60.597 57.895 0.00 0.00 0.00 3.67
352 353 2.966309 GCGAGAGGCACGGTTTTGG 61.966 63.158 0.00 0.00 42.87 3.28
353 354 2.556287 GCGAGAGGCACGGTTTTG 59.444 61.111 0.00 0.00 42.87 2.44
354 355 2.981977 TTCGCGAGAGGCACGGTTTT 62.982 55.000 9.59 0.00 43.84 2.43
355 356 2.981977 TTTCGCGAGAGGCACGGTTT 62.982 55.000 9.59 0.00 43.84 3.27
356 357 2.981977 TTTTCGCGAGAGGCACGGTT 62.982 55.000 9.59 0.00 43.84 4.44
357 358 3.509137 TTTTCGCGAGAGGCACGGT 62.509 57.895 9.59 0.00 43.84 4.83
358 359 2.736995 TTTTCGCGAGAGGCACGG 60.737 61.111 9.59 0.00 43.84 4.94
359 360 1.827315 TTGTTTTCGCGAGAGGCACG 61.827 55.000 9.59 0.00 43.84 5.34
360 361 0.306533 TTTGTTTTCGCGAGAGGCAC 59.693 50.000 9.59 0.37 43.84 5.01
361 362 1.018148 TTTTGTTTTCGCGAGAGGCA 58.982 45.000 9.59 5.38 43.84 4.75
362 363 1.395670 GTTTTGTTTTCGCGAGAGGC 58.604 50.000 9.59 2.53 43.69 4.70
363 364 1.659211 CGGTTTTGTTTTCGCGAGAGG 60.659 52.381 9.59 0.00 43.69 3.69
364 365 1.004292 ACGGTTTTGTTTTCGCGAGAG 60.004 47.619 9.59 0.00 43.69 3.20
365 366 1.008329 ACGGTTTTGTTTTCGCGAGA 58.992 45.000 9.59 0.43 39.20 4.04
366 367 1.109296 CACGGTTTTGTTTTCGCGAG 58.891 50.000 9.59 0.00 0.00 5.03
367 368 0.862283 GCACGGTTTTGTTTTCGCGA 60.862 50.000 3.71 3.71 0.00 5.87
368 369 1.551312 GCACGGTTTTGTTTTCGCG 59.449 52.632 0.00 0.00 0.00 5.87
369 370 0.526739 AGGCACGGTTTTGTTTTCGC 60.527 50.000 0.00 0.00 0.00 4.70
370 371 1.064952 AGAGGCACGGTTTTGTTTTCG 59.935 47.619 0.00 0.00 0.00 3.46
371 372 2.098443 TGAGAGGCACGGTTTTGTTTTC 59.902 45.455 0.00 0.00 0.00 2.29
372 373 2.096248 TGAGAGGCACGGTTTTGTTTT 58.904 42.857 0.00 0.00 0.00 2.43
373 374 1.404035 GTGAGAGGCACGGTTTTGTTT 59.596 47.619 0.00 0.00 37.83 2.83
374 375 1.021968 GTGAGAGGCACGGTTTTGTT 58.978 50.000 0.00 0.00 37.83 2.83
375 376 2.702847 GTGAGAGGCACGGTTTTGT 58.297 52.632 0.00 0.00 37.83 2.83
417 418 9.139174 CTGTCTTTCTTAGCTTTTTGACAAAAA 57.861 29.630 21.60 21.60 37.99 1.94
418 419 7.759433 CCTGTCTTTCTTAGCTTTTTGACAAAA 59.241 33.333 9.30 9.30 33.66 2.44
419 420 7.093945 ACCTGTCTTTCTTAGCTTTTTGACAAA 60.094 33.333 0.00 0.00 33.66 2.83
420 421 6.377146 ACCTGTCTTTCTTAGCTTTTTGACAA 59.623 34.615 0.00 0.00 33.66 3.18
421 422 5.885912 ACCTGTCTTTCTTAGCTTTTTGACA 59.114 36.000 0.00 0.00 0.00 3.58
422 423 6.378710 ACCTGTCTTTCTTAGCTTTTTGAC 57.621 37.500 0.00 0.00 0.00 3.18
423 424 7.506114 TCTACCTGTCTTTCTTAGCTTTTTGA 58.494 34.615 0.00 0.00 0.00 2.69
424 425 7.730364 TCTACCTGTCTTTCTTAGCTTTTTG 57.270 36.000 0.00 0.00 0.00 2.44
425 426 8.747538 TTTCTACCTGTCTTTCTTAGCTTTTT 57.252 30.769 0.00 0.00 0.00 1.94
426 427 8.622157 GTTTTCTACCTGTCTTTCTTAGCTTTT 58.378 33.333 0.00 0.00 0.00 2.27
427 428 7.228906 GGTTTTCTACCTGTCTTTCTTAGCTTT 59.771 37.037 0.00 0.00 44.10 3.51
428 429 6.711194 GGTTTTCTACCTGTCTTTCTTAGCTT 59.289 38.462 0.00 0.00 44.10 3.74
429 430 6.231951 GGTTTTCTACCTGTCTTTCTTAGCT 58.768 40.000 0.00 0.00 44.10 3.32
430 431 5.120363 CGGTTTTCTACCTGTCTTTCTTAGC 59.880 44.000 0.00 0.00 45.40 3.09
431 432 6.453092 TCGGTTTTCTACCTGTCTTTCTTAG 58.547 40.000 0.00 0.00 45.40 2.18
432 433 6.409524 TCGGTTTTCTACCTGTCTTTCTTA 57.590 37.500 0.00 0.00 45.40 2.10
433 434 5.286267 TCGGTTTTCTACCTGTCTTTCTT 57.714 39.130 0.00 0.00 45.40 2.52
434 435 4.950205 TCGGTTTTCTACCTGTCTTTCT 57.050 40.909 0.00 0.00 45.40 2.52
435 436 5.996669 TTTCGGTTTTCTACCTGTCTTTC 57.003 39.130 0.00 0.00 45.40 2.62
436 437 5.884232 ACTTTTCGGTTTTCTACCTGTCTTT 59.116 36.000 0.00 0.00 45.40 2.52
437 438 5.434408 ACTTTTCGGTTTTCTACCTGTCTT 58.566 37.500 0.00 0.00 45.40 3.01
438 439 5.032327 ACTTTTCGGTTTTCTACCTGTCT 57.968 39.130 0.00 0.00 45.40 3.41
439 440 4.812626 TGACTTTTCGGTTTTCTACCTGTC 59.187 41.667 0.00 0.00 45.40 3.51
440 441 4.773013 TGACTTTTCGGTTTTCTACCTGT 58.227 39.130 0.00 0.00 45.40 4.00
441 442 5.744666 TTGACTTTTCGGTTTTCTACCTG 57.255 39.130 0.00 0.00 45.40 4.00
442 443 6.762702 TTTTGACTTTTCGGTTTTCTACCT 57.237 33.333 0.00 0.00 45.40 3.08
464 465 6.127310 GCTTTTTAATGGTTTTGGGGGTTTTT 60.127 34.615 0.00 0.00 0.00 1.94
465 466 5.361285 GCTTTTTAATGGTTTTGGGGGTTTT 59.639 36.000 0.00 0.00 0.00 2.43
466 467 4.890581 GCTTTTTAATGGTTTTGGGGGTTT 59.109 37.500 0.00 0.00 0.00 3.27
467 468 4.465886 GCTTTTTAATGGTTTTGGGGGTT 58.534 39.130 0.00 0.00 0.00 4.11
468 469 3.181438 GGCTTTTTAATGGTTTTGGGGGT 60.181 43.478 0.00 0.00 0.00 4.95
469 470 3.417101 GGCTTTTTAATGGTTTTGGGGG 58.583 45.455 0.00 0.00 0.00 5.40
470 471 3.070748 CGGCTTTTTAATGGTTTTGGGG 58.929 45.455 0.00 0.00 0.00 4.96
471 472 3.996480 TCGGCTTTTTAATGGTTTTGGG 58.004 40.909 0.00 0.00 0.00 4.12
472 473 5.993106 TTTCGGCTTTTTAATGGTTTTGG 57.007 34.783 0.00 0.00 0.00 3.28
473 474 6.684979 GTGTTTTCGGCTTTTTAATGGTTTTG 59.315 34.615 0.00 0.00 0.00 2.44
474 475 6.371825 TGTGTTTTCGGCTTTTTAATGGTTTT 59.628 30.769 0.00 0.00 0.00 2.43
475 476 5.875359 TGTGTTTTCGGCTTTTTAATGGTTT 59.125 32.000 0.00 0.00 0.00 3.27
476 477 5.420409 TGTGTTTTCGGCTTTTTAATGGTT 58.580 33.333 0.00 0.00 0.00 3.67
477 478 5.012328 TGTGTTTTCGGCTTTTTAATGGT 57.988 34.783 0.00 0.00 0.00 3.55
478 479 5.614449 GCATGTGTTTTCGGCTTTTTAATGG 60.614 40.000 0.00 0.00 0.00 3.16
479 480 5.373262 GCATGTGTTTTCGGCTTTTTAATG 58.627 37.500 0.00 0.00 0.00 1.90
480 481 4.149747 CGCATGTGTTTTCGGCTTTTTAAT 59.850 37.500 0.00 0.00 0.00 1.40
481 482 3.487574 CGCATGTGTTTTCGGCTTTTTAA 59.512 39.130 0.00 0.00 0.00 1.52
482 483 3.046390 CGCATGTGTTTTCGGCTTTTTA 58.954 40.909 0.00 0.00 0.00 1.52
483 484 1.857837 CGCATGTGTTTTCGGCTTTTT 59.142 42.857 0.00 0.00 0.00 1.94
484 485 1.066303 TCGCATGTGTTTTCGGCTTTT 59.934 42.857 6.09 0.00 0.00 2.27
485 486 0.665835 TCGCATGTGTTTTCGGCTTT 59.334 45.000 6.09 0.00 0.00 3.51
486 487 0.665835 TTCGCATGTGTTTTCGGCTT 59.334 45.000 6.09 0.00 0.00 4.35
487 488 0.665835 TTTCGCATGTGTTTTCGGCT 59.334 45.000 6.09 0.00 0.00 5.52
488 489 1.482278 TTTTCGCATGTGTTTTCGGC 58.518 45.000 6.09 0.00 0.00 5.54
517 518 6.252655 CGTGTCTTCCTTCGAATTTTGTTTTT 59.747 34.615 0.00 0.00 0.00 1.94
518 519 5.741982 CGTGTCTTCCTTCGAATTTTGTTTT 59.258 36.000 0.00 0.00 0.00 2.43
519 520 5.163693 ACGTGTCTTCCTTCGAATTTTGTTT 60.164 36.000 0.00 0.00 0.00 2.83
520 521 4.334481 ACGTGTCTTCCTTCGAATTTTGTT 59.666 37.500 0.00 0.00 0.00 2.83
521 522 3.875134 ACGTGTCTTCCTTCGAATTTTGT 59.125 39.130 0.00 0.00 0.00 2.83
522 523 4.211389 CACGTGTCTTCCTTCGAATTTTG 58.789 43.478 7.58 0.00 0.00 2.44
523 524 3.250040 CCACGTGTCTTCCTTCGAATTTT 59.750 43.478 15.65 0.00 0.00 1.82
524 525 2.806244 CCACGTGTCTTCCTTCGAATTT 59.194 45.455 15.65 0.00 0.00 1.82
525 526 2.413837 CCACGTGTCTTCCTTCGAATT 58.586 47.619 15.65 0.00 0.00 2.17
526 527 1.939838 GCCACGTGTCTTCCTTCGAAT 60.940 52.381 15.65 0.00 0.00 3.34
527 528 0.599204 GCCACGTGTCTTCCTTCGAA 60.599 55.000 15.65 0.00 0.00 3.71
528 529 1.006571 GCCACGTGTCTTCCTTCGA 60.007 57.895 15.65 0.00 0.00 3.71
529 530 2.372690 CGCCACGTGTCTTCCTTCG 61.373 63.158 15.65 0.00 0.00 3.79
530 531 2.027625 CCGCCACGTGTCTTCCTTC 61.028 63.158 15.65 0.00 0.00 3.46
531 532 2.030562 CCGCCACGTGTCTTCCTT 59.969 61.111 15.65 0.00 0.00 3.36
532 533 4.681978 GCCGCCACGTGTCTTCCT 62.682 66.667 15.65 0.00 0.00 3.36
550 551 2.696759 AATTAGCGCGTGCCCAACC 61.697 57.895 19.02 0.00 44.31 3.77
551 552 1.514014 CAATTAGCGCGTGCCCAAC 60.514 57.895 19.02 0.00 44.31 3.77
552 553 2.695759 CCAATTAGCGCGTGCCCAA 61.696 57.895 19.02 12.75 44.31 4.12
553 554 3.130819 CCAATTAGCGCGTGCCCA 61.131 61.111 19.02 4.47 44.31 5.36
554 555 4.552745 GCCAATTAGCGCGTGCCC 62.553 66.667 19.02 0.00 44.31 5.36
555 556 3.124798 ATGCCAATTAGCGCGTGCC 62.125 57.895 19.02 0.12 44.31 5.01
556 557 1.940758 CATGCCAATTAGCGCGTGC 60.941 57.895 14.39 14.39 43.24 5.34
557 558 1.940758 GCATGCCAATTAGCGCGTG 60.941 57.895 6.36 0.00 43.45 5.34
558 559 2.051804 GAGCATGCCAATTAGCGCGT 62.052 55.000 15.66 0.00 34.65 6.01
559 560 1.369689 GAGCATGCCAATTAGCGCG 60.370 57.895 15.66 0.00 34.65 6.86
560 561 1.229428 TAGAGCATGCCAATTAGCGC 58.771 50.000 15.66 0.00 34.65 5.92
561 562 2.350197 GCTTAGAGCATGCCAATTAGCG 60.350 50.000 15.66 0.00 41.89 4.26
562 563 2.030451 GGCTTAGAGCATGCCAATTAGC 60.030 50.000 15.66 16.21 44.75 3.09
563 564 2.555757 GGGCTTAGAGCATGCCAATTAG 59.444 50.000 15.66 7.05 46.93 1.73
564 565 2.091939 TGGGCTTAGAGCATGCCAATTA 60.092 45.455 15.66 0.00 46.93 1.40
565 566 1.342275 TGGGCTTAGAGCATGCCAATT 60.342 47.619 15.66 0.00 46.93 2.32
566 567 0.259647 TGGGCTTAGAGCATGCCAAT 59.740 50.000 15.66 2.79 46.93 3.16
567 568 0.259647 ATGGGCTTAGAGCATGCCAA 59.740 50.000 15.66 5.42 46.93 4.52
568 569 0.179009 GATGGGCTTAGAGCATGCCA 60.179 55.000 15.66 2.39 46.93 4.92
569 570 0.892814 GGATGGGCTTAGAGCATGCC 60.893 60.000 15.66 6.03 44.75 4.40
570 571 0.179009 TGGATGGGCTTAGAGCATGC 60.179 55.000 10.51 10.51 44.75 4.06
571 572 2.160205 CATGGATGGGCTTAGAGCATG 58.840 52.381 2.04 0.00 44.75 4.06
572 573 1.779092 ACATGGATGGGCTTAGAGCAT 59.221 47.619 0.00 0.00 44.75 3.79
573 574 1.216064 ACATGGATGGGCTTAGAGCA 58.784 50.000 0.00 0.00 44.75 4.26
574 575 3.492102 TTACATGGATGGGCTTAGAGC 57.508 47.619 0.00 0.00 41.46 4.09
575 576 4.248859 CGATTACATGGATGGGCTTAGAG 58.751 47.826 0.00 0.00 0.00 2.43
576 577 3.646162 ACGATTACATGGATGGGCTTAGA 59.354 43.478 0.00 0.00 0.00 2.10
577 578 4.008074 ACGATTACATGGATGGGCTTAG 57.992 45.455 0.00 0.00 0.00 2.18
578 579 4.133820 CAACGATTACATGGATGGGCTTA 58.866 43.478 0.00 0.00 0.00 3.09
579 580 2.951642 CAACGATTACATGGATGGGCTT 59.048 45.455 0.00 0.00 0.00 4.35
580 581 2.575532 CAACGATTACATGGATGGGCT 58.424 47.619 0.00 0.00 0.00 5.19
581 582 1.608590 CCAACGATTACATGGATGGGC 59.391 52.381 0.00 0.00 36.27 5.36
582 583 3.207265 TCCAACGATTACATGGATGGG 57.793 47.619 0.00 0.00 38.30 4.00
583 584 3.565482 CCTTCCAACGATTACATGGATGG 59.435 47.826 10.43 10.43 46.09 3.51
584 585 3.003689 GCCTTCCAACGATTACATGGATG 59.996 47.826 0.00 0.00 42.53 3.51
585 586 3.117888 AGCCTTCCAACGATTACATGGAT 60.118 43.478 0.00 0.00 42.53 3.41
586 587 2.238646 AGCCTTCCAACGATTACATGGA 59.761 45.455 0.00 0.00 41.36 3.41
587 588 2.614057 GAGCCTTCCAACGATTACATGG 59.386 50.000 0.00 0.00 35.49 3.66
588 589 3.535561 AGAGCCTTCCAACGATTACATG 58.464 45.455 0.00 0.00 0.00 3.21
589 590 3.738281 CGAGAGCCTTCCAACGATTACAT 60.738 47.826 0.00 0.00 0.00 2.29
590 591 2.416836 CGAGAGCCTTCCAACGATTACA 60.417 50.000 0.00 0.00 0.00 2.41
591 592 2.159282 TCGAGAGCCTTCCAACGATTAC 60.159 50.000 0.00 0.00 0.00 1.89
592 593 2.097036 TCGAGAGCCTTCCAACGATTA 58.903 47.619 0.00 0.00 0.00 1.75
593 594 0.895530 TCGAGAGCCTTCCAACGATT 59.104 50.000 0.00 0.00 0.00 3.34
594 595 0.895530 TTCGAGAGCCTTCCAACGAT 59.104 50.000 0.00 0.00 0.00 3.73
595 596 0.243907 CTTCGAGAGCCTTCCAACGA 59.756 55.000 0.00 0.00 0.00 3.85
596 597 0.737715 CCTTCGAGAGCCTTCCAACG 60.738 60.000 0.00 0.00 0.00 4.10
597 598 0.608640 TCCTTCGAGAGCCTTCCAAC 59.391 55.000 0.00 0.00 0.00 3.77
598 599 1.002087 GTTCCTTCGAGAGCCTTCCAA 59.998 52.381 0.00 0.00 0.00 3.53
599 600 0.608640 GTTCCTTCGAGAGCCTTCCA 59.391 55.000 0.00 0.00 0.00 3.53
600 601 0.458716 CGTTCCTTCGAGAGCCTTCC 60.459 60.000 0.00 0.00 0.00 3.46
601 602 1.079317 GCGTTCCTTCGAGAGCCTTC 61.079 60.000 0.00 0.00 0.00 3.46
602 603 1.079750 GCGTTCCTTCGAGAGCCTT 60.080 57.895 0.00 0.00 0.00 4.35
603 604 0.680280 TAGCGTTCCTTCGAGAGCCT 60.680 55.000 0.00 0.00 0.00 4.58
604 605 0.525882 GTAGCGTTCCTTCGAGAGCC 60.526 60.000 0.00 0.00 0.00 4.70
605 606 0.452585 AGTAGCGTTCCTTCGAGAGC 59.547 55.000 0.00 0.00 0.00 4.09
606 607 1.738350 TGAGTAGCGTTCCTTCGAGAG 59.262 52.381 0.00 0.00 0.00 3.20
607 608 1.817357 TGAGTAGCGTTCCTTCGAGA 58.183 50.000 0.00 0.00 0.00 4.04
608 609 2.095161 AGTTGAGTAGCGTTCCTTCGAG 60.095 50.000 0.00 0.00 0.00 4.04
609 610 1.884579 AGTTGAGTAGCGTTCCTTCGA 59.115 47.619 0.00 0.00 0.00 3.71
610 611 2.349297 AGTTGAGTAGCGTTCCTTCG 57.651 50.000 0.00 0.00 0.00 3.79
611 612 2.157863 GCAAGTTGAGTAGCGTTCCTTC 59.842 50.000 7.16 0.00 0.00 3.46
612 613 2.143925 GCAAGTTGAGTAGCGTTCCTT 58.856 47.619 7.16 0.00 0.00 3.36
613 614 1.344763 AGCAAGTTGAGTAGCGTTCCT 59.655 47.619 7.16 0.00 0.00 3.36
614 615 1.797025 AGCAAGTTGAGTAGCGTTCC 58.203 50.000 7.16 0.00 0.00 3.62
615 616 3.240861 CGATAGCAAGTTGAGTAGCGTTC 59.759 47.826 7.16 0.00 0.00 3.95
616 617 3.119602 TCGATAGCAAGTTGAGTAGCGTT 60.120 43.478 17.51 0.00 0.00 4.84
617 618 2.422479 TCGATAGCAAGTTGAGTAGCGT 59.578 45.455 17.51 0.00 0.00 5.07
618 619 3.066369 TCGATAGCAAGTTGAGTAGCG 57.934 47.619 7.16 11.49 0.00 4.26
619 620 4.673441 TCTTCGATAGCAAGTTGAGTAGC 58.327 43.478 7.16 0.00 0.00 3.58
620 621 7.329717 AGTTTTCTTCGATAGCAAGTTGAGTAG 59.670 37.037 7.16 0.00 0.00 2.57
621 622 7.152645 AGTTTTCTTCGATAGCAAGTTGAGTA 58.847 34.615 7.16 0.00 0.00 2.59
622 623 5.992217 AGTTTTCTTCGATAGCAAGTTGAGT 59.008 36.000 7.16 0.00 0.00 3.41
623 624 6.473397 AGTTTTCTTCGATAGCAAGTTGAG 57.527 37.500 7.16 0.00 0.00 3.02
624 625 7.152645 ACTAGTTTTCTTCGATAGCAAGTTGA 58.847 34.615 7.16 0.00 0.00 3.18
625 626 7.352719 ACTAGTTTTCTTCGATAGCAAGTTG 57.647 36.000 0.00 0.00 0.00 3.16
626 627 7.571428 GCAACTAGTTTTCTTCGATAGCAAGTT 60.571 37.037 5.07 0.00 0.00 2.66
627 628 6.128526 GCAACTAGTTTTCTTCGATAGCAAGT 60.129 38.462 5.07 0.00 0.00 3.16
628 629 6.091441 AGCAACTAGTTTTCTTCGATAGCAAG 59.909 38.462 5.07 0.00 0.00 4.01
629 630 5.932303 AGCAACTAGTTTTCTTCGATAGCAA 59.068 36.000 5.07 0.00 0.00 3.91
630 631 5.479306 AGCAACTAGTTTTCTTCGATAGCA 58.521 37.500 5.07 0.00 0.00 3.49
631 632 5.808030 AGAGCAACTAGTTTTCTTCGATAGC 59.192 40.000 5.07 2.26 0.00 2.97
632 633 8.399425 TCTAGAGCAACTAGTTTTCTTCGATAG 58.601 37.037 19.28 12.69 46.15 2.08
633 634 8.277490 TCTAGAGCAACTAGTTTTCTTCGATA 57.723 34.615 19.28 5.78 46.15 2.92
634 635 7.159322 TCTAGAGCAACTAGTTTTCTTCGAT 57.841 36.000 19.28 2.41 46.15 3.59
635 636 6.570672 TCTAGAGCAACTAGTTTTCTTCGA 57.429 37.500 19.28 14.64 46.15 3.71
636 637 7.085116 TCTTCTAGAGCAACTAGTTTTCTTCG 58.915 38.462 19.28 13.20 46.15 3.79
637 638 8.819643 TTCTTCTAGAGCAACTAGTTTTCTTC 57.180 34.615 19.28 9.78 46.15 2.87
638 639 9.614792 TTTTCTTCTAGAGCAACTAGTTTTCTT 57.385 29.630 19.28 5.14 46.15 2.52
639 640 9.267084 CTTTTCTTCTAGAGCAACTAGTTTTCT 57.733 33.333 18.49 18.49 46.15 2.52
640 641 9.262358 TCTTTTCTTCTAGAGCAACTAGTTTTC 57.738 33.333 5.07 7.06 46.15 2.29
641 642 9.614792 TTCTTTTCTTCTAGAGCAACTAGTTTT 57.385 29.630 5.07 0.00 46.15 2.43
642 643 9.614792 TTTCTTTTCTTCTAGAGCAACTAGTTT 57.385 29.630 5.07 0.00 46.15 2.66
667 668 5.048083 CGGCCCATTAGCACATATGTTTATT 60.048 40.000 5.37 0.00 0.00 1.40
703 704 1.210478 TGAAGCTTCTCTACATGGGCC 59.790 52.381 26.09 0.00 0.00 5.80
905 911 1.547472 GGTGGTGGGTAGTAACGGCT 61.547 60.000 0.00 0.00 0.00 5.52
914 920 0.118346 AGAGATGGTGGTGGTGGGTA 59.882 55.000 0.00 0.00 0.00 3.69
946 952 2.701423 GGAGATGGTAAGAGGAGGGAAC 59.299 54.545 0.00 0.00 0.00 3.62
947 953 2.317900 TGGAGATGGTAAGAGGAGGGAA 59.682 50.000 0.00 0.00 0.00 3.97
949 955 2.043227 GTGGAGATGGTAAGAGGAGGG 58.957 57.143 0.00 0.00 0.00 4.30
994 1001 0.898320 ACGGAGAAGTCCATCACAGG 59.102 55.000 0.00 0.00 44.18 4.00
998 1005 1.095600 CTCGACGGAGAAGTCCATCA 58.904 55.000 0.00 0.00 44.18 3.07
1055 1063 1.124780 TTTCTTGTCGACCAGGACCA 58.875 50.000 15.94 0.00 36.07 4.02
1121 1135 1.338973 ACTTTGGTCGCTTCAGTCGTA 59.661 47.619 0.00 0.00 0.00 3.43
1196 1213 5.462068 CCAGAAACAAAAGGAAAACCGAATC 59.538 40.000 0.00 0.00 0.00 2.52
1277 1458 8.768019 GCAAATAGAATTTCCATTTAGATTGCC 58.232 33.333 3.05 0.00 0.00 4.52
1306 1487 2.943033 CACTTTCCCTAAACCATAGCGG 59.057 50.000 0.00 0.00 42.50 5.52
1353 1535 3.997276 TGCAACATACGTTTAAGCATCG 58.003 40.909 0.00 0.00 29.44 3.84
1391 1698 1.002773 GAAAGCTAAACCACCCGGAGA 59.997 52.381 0.73 0.00 35.59 3.71
1453 1760 4.524053 GGACCGAGGGAGTATTTTTCAAT 58.476 43.478 0.00 0.00 0.00 2.57
1548 1855 2.994186 TTGGTTATTACTCCCTCCGC 57.006 50.000 0.00 0.00 0.00 5.54
1564 1871 4.970662 ATCATCTGAAAACCGACATTGG 57.029 40.909 0.00 0.00 0.00 3.16
1565 1872 8.491152 GTCTATATCATCTGAAAACCGACATTG 58.509 37.037 0.00 0.00 0.00 2.82
1855 2170 4.794648 TACATGCACCGGGCTGCC 62.795 66.667 11.05 11.05 45.15 4.85
1856 2171 3.204827 CTACATGCACCGGGCTGC 61.205 66.667 6.32 8.50 45.15 5.25
1857 2172 3.204827 GCTACATGCACCGGGCTG 61.205 66.667 6.32 9.21 45.15 4.85
1858 2173 3.391665 GAGCTACATGCACCGGGCT 62.392 63.158 6.32 0.81 45.94 5.19
1859 2174 2.897350 GAGCTACATGCACCGGGC 60.897 66.667 6.32 7.25 45.94 6.13
1860 2175 2.203070 GGAGCTACATGCACCGGG 60.203 66.667 6.32 0.00 42.21 5.73
1886 2201 3.400054 GACCCTTCCCCGACCCTG 61.400 72.222 0.00 0.00 0.00 4.45
1887 2202 4.735599 GGACCCTTCCCCGACCCT 62.736 72.222 0.00 0.00 35.57 4.34
1893 2208 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
1894 2209 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
1895 2210 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
1896 2211 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
1897 2212 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
1898 2213 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
1899 2214 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
1900 2215 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
1901 2216 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
1906 2221 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
1907 2222 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
1908 2223 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
1909 2224 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
1910 2225 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
1911 2226 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
1912 2227 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
1913 2228 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
1914 2229 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
1915 2230 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
1916 2231 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
1917 2232 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
1918 2233 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
1919 2234 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
1920 2235 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
1921 2236 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
1922 2237 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
1923 2238 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
1924 2239 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
1925 2240 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
1926 2241 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
1927 2242 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
1928 2243 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
1929 2244 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
1930 2245 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
1931 2246 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
1932 2247 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
1933 2248 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
1934 2249 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
1935 2250 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
1936 2251 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
1937 2252 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
1938 2253 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
1939 2254 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
1940 2255 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
1941 2256 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
1942 2257 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
1943 2258 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
1957 2272 2.235016 CGGGTTCAAATCCTGGAAACA 58.765 47.619 0.00 0.00 32.36 2.83
1958 2273 2.030274 CACGGGTTCAAATCCTGGAAAC 60.030 50.000 0.00 0.00 35.79 2.78
1959 2274 2.158593 TCACGGGTTCAAATCCTGGAAA 60.159 45.455 0.00 0.00 35.79 3.13
1960 2275 1.422024 TCACGGGTTCAAATCCTGGAA 59.578 47.619 0.00 0.00 35.79 3.53
1961 2276 1.060729 TCACGGGTTCAAATCCTGGA 58.939 50.000 0.00 0.00 35.79 3.86
1962 2277 1.165270 GTCACGGGTTCAAATCCTGG 58.835 55.000 0.00 0.00 35.79 4.45
1963 2278 1.165270 GGTCACGGGTTCAAATCCTG 58.835 55.000 0.00 0.00 37.36 3.86
1964 2279 1.003233 GAGGTCACGGGTTCAAATCCT 59.997 52.381 0.00 0.00 0.00 3.24
1965 2280 1.271163 TGAGGTCACGGGTTCAAATCC 60.271 52.381 0.00 0.00 0.00 3.01
1966 2281 2.178912 TGAGGTCACGGGTTCAAATC 57.821 50.000 0.00 0.00 0.00 2.17
1967 2282 2.436417 CATGAGGTCACGGGTTCAAAT 58.564 47.619 0.00 0.00 0.00 2.32
1968 2283 1.544537 CCATGAGGTCACGGGTTCAAA 60.545 52.381 0.00 0.00 0.00 2.69
1969 2284 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.000 0.00 0.00 0.00 2.69
1970 2285 1.676968 CCATGAGGTCACGGGTTCA 59.323 57.895 0.00 0.00 0.00 3.18
1971 2286 4.617875 CCATGAGGTCACGGGTTC 57.382 61.111 0.00 0.00 0.00 3.62
1981 2296 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
1982 2297 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
1983 2298 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
1984 2299 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
1985 2300 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
1986 2301 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
1987 2302 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
1988 2303 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
1989 2304 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
1990 2305 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
1991 2306 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
1992 2307 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
1993 2308 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
1994 2309 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
1995 2310 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
2000 2315 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
2001 2316 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
2002 2317 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
2003 2318 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
2004 2319 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
2005 2320 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
2006 2321 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
2014 2329 3.567579 TTGAAGGGGAGCCTTGGCG 62.568 63.158 5.95 0.00 0.00 5.69
2015 2330 1.979155 GTTGAAGGGGAGCCTTGGC 60.979 63.158 2.97 2.97 0.00 4.52
2016 2331 0.040204 ATGTTGAAGGGGAGCCTTGG 59.960 55.000 0.00 0.00 0.00 3.61
2017 2332 1.180029 CATGTTGAAGGGGAGCCTTG 58.820 55.000 0.00 0.00 0.00 3.61
2018 2333 0.779997 ACATGTTGAAGGGGAGCCTT 59.220 50.000 0.00 0.00 0.00 4.35
2019 2334 1.282157 GTACATGTTGAAGGGGAGCCT 59.718 52.381 2.30 0.00 0.00 4.58
2020 2335 1.282157 AGTACATGTTGAAGGGGAGCC 59.718 52.381 2.30 0.00 0.00 4.70
2021 2336 2.027192 TGAGTACATGTTGAAGGGGAGC 60.027 50.000 2.30 0.00 0.00 4.70
2022 2337 3.981071 TGAGTACATGTTGAAGGGGAG 57.019 47.619 2.30 0.00 0.00 4.30
2023 2338 4.220693 CATGAGTACATGTTGAAGGGGA 57.779 45.455 2.30 0.00 46.01 4.81
2079 2394 8.582437 TGTCTAGTAACTTGTAGCTGTACAAAT 58.418 33.333 0.00 0.00 46.28 2.32
2287 2604 1.198759 TCCCAGCTAGACAACACCCC 61.199 60.000 0.00 0.00 0.00 4.95
2359 2677 3.877508 GTGACTAGAATGTAACCATGCCC 59.122 47.826 0.00 0.00 0.00 5.36
2457 2776 3.892633 TGGCTTGTCAGAAACCACA 57.107 47.368 0.00 0.00 0.00 4.17
2553 2873 9.939802 AAAGAAAAGTCCTTAAGTCATACGTAT 57.060 29.630 1.14 1.14 0.00 3.06
2554 2874 9.415544 GAAAGAAAAGTCCTTAAGTCATACGTA 57.584 33.333 0.00 0.00 0.00 3.57
2555 2875 7.929785 TGAAAGAAAAGTCCTTAAGTCATACGT 59.070 33.333 0.97 0.00 0.00 3.57
2556 2876 8.306680 TGAAAGAAAAGTCCTTAAGTCATACG 57.693 34.615 0.97 0.00 0.00 3.06
2557 2877 8.722394 CCTGAAAGAAAAGTCCTTAAGTCATAC 58.278 37.037 0.97 0.00 34.07 2.39
2558 2878 8.437575 ACCTGAAAGAAAAGTCCTTAAGTCATA 58.562 33.333 0.97 0.00 34.07 2.15
2559 2879 7.229506 CACCTGAAAGAAAAGTCCTTAAGTCAT 59.770 37.037 0.97 0.00 34.07 3.06
2560 2880 6.542370 CACCTGAAAGAAAAGTCCTTAAGTCA 59.458 38.462 0.97 0.00 34.07 3.41
2561 2881 6.542735 ACACCTGAAAGAAAAGTCCTTAAGTC 59.457 38.462 0.97 0.00 34.07 3.01
2569 2897 4.602006 GCAAGACACCTGAAAGAAAAGTC 58.398 43.478 0.00 0.00 34.07 3.01
2572 2900 3.275143 TCGCAAGACACCTGAAAGAAAA 58.725 40.909 0.00 0.00 45.01 2.29
2608 2936 4.990426 GCAGACCATAACTTTTTGCAACAT 59.010 37.500 0.00 0.00 0.00 2.71
2621 2949 2.511373 CCGCGCTGCAGACCATAA 60.511 61.111 20.43 0.00 0.00 1.90
3059 3394 5.523369 GGCATACATGTTTTTCCTATGAGC 58.477 41.667 2.30 0.00 0.00 4.26
3295 3630 7.465353 TTCAGGATATCATTTTGCAAAGACA 57.535 32.000 12.41 0.00 0.00 3.41
3312 3647 2.494870 GCAACCAAAGAGCATTCAGGAT 59.505 45.455 0.00 0.00 0.00 3.24
3586 3921 2.843701 CCAAAGCTCTGAGTTGACTGT 58.156 47.619 6.53 0.00 0.00 3.55
3605 3940 6.341316 ACAGTCATCGGTATCATAATATGCC 58.659 40.000 0.00 0.00 0.00 4.40
3607 3942 8.986477 TGAACAGTCATCGGTATCATAATATG 57.014 34.615 0.00 0.00 0.00 1.78
3619 3954 1.406219 CGCGTCTGAACAGTCATCGG 61.406 60.000 0.00 0.00 34.07 4.18
3637 3972 2.932614 CCTAAGCTCATCAACTTGTCCG 59.067 50.000 0.00 0.00 0.00 4.79
3642 3977 3.584848 ACACTCCCTAAGCTCATCAACTT 59.415 43.478 0.00 0.00 0.00 2.66
3673 4008 6.183347 GGGAGTATGAAATCATTATCCCCAG 58.817 44.000 22.93 0.00 45.16 4.45
3674 4009 6.139679 GGGAGTATGAAATCATTATCCCCA 57.860 41.667 22.93 0.00 45.16 4.96
3722 4057 3.506455 GCTCATCCATATGCTGCTCAAAT 59.494 43.478 0.00 0.00 32.90 2.32
3762 4097 4.522789 GTCCATATCAACAACTTTGGGTGT 59.477 41.667 0.00 0.00 0.00 4.16
3843 4178 5.959583 ACCTCCTCTAATTTGGAACCTAG 57.040 43.478 0.00 0.00 31.23 3.02
3847 4182 6.071896 CCTGAAAACCTCCTCTAATTTGGAAC 60.072 42.308 0.00 0.00 31.23 3.62
3936 4271 4.037222 TGATTGGTATCAACAGCCTCCTA 58.963 43.478 0.00 0.00 37.83 2.94
3998 4333 4.534168 CTGCTGTTGAAGTTTCATCACAG 58.466 43.478 16.74 16.74 43.68 3.66
4066 4401 0.038159 CTCTTCCACTTCGCCGTTCT 60.038 55.000 0.00 0.00 0.00 3.01
4084 4419 3.776969 TCCAAGATAATGTCTGGTGAGCT 59.223 43.478 0.00 0.00 37.23 4.09
4134 4469 0.105408 ATGATACCCCGCAACGTACC 59.895 55.000 0.00 0.00 0.00 3.34
4152 4487 4.899352 AGGACAACAGAGAAGCTACAAT 57.101 40.909 0.00 0.00 0.00 2.71
4178 4513 5.585844 CACACATGCAACATATACCTGAGAA 59.414 40.000 0.00 0.00 0.00 2.87
4322 4657 1.250154 CCTTCTCGGCAAATTGGGCA 61.250 55.000 7.24 0.00 0.00 5.36
4346 4681 1.265454 ACGGGAGGGCAGGAAAGTAG 61.265 60.000 0.00 0.00 0.00 2.57
4429 4765 0.387622 CTTGGTCAATGCAACTGCGG 60.388 55.000 0.00 0.00 45.83 5.69
4430 4766 0.311790 ACTTGGTCAATGCAACTGCG 59.688 50.000 0.00 0.00 45.83 5.18
4446 4782 5.425539 TGCTAGGTCATTAGCCTCTTAACTT 59.574 40.000 2.89 0.00 44.29 2.66
4582 4918 8.746530 AGATACAAGTATTTGGAGACGAACTAA 58.253 33.333 2.81 0.00 38.66 2.24
4750 5086 4.979815 CCCGTCAAACATTTTTAGGTTCAC 59.020 41.667 0.00 0.00 0.00 3.18
4751 5087 4.500035 GCCCGTCAAACATTTTTAGGTTCA 60.500 41.667 0.00 0.00 0.00 3.18
4752 5088 3.985279 GCCCGTCAAACATTTTTAGGTTC 59.015 43.478 0.00 0.00 0.00 3.62
4753 5089 3.243941 GGCCCGTCAAACATTTTTAGGTT 60.244 43.478 0.00 0.00 0.00 3.50
4754 5090 2.297880 GGCCCGTCAAACATTTTTAGGT 59.702 45.455 0.00 0.00 0.00 3.08
4755 5091 2.560981 AGGCCCGTCAAACATTTTTAGG 59.439 45.455 0.00 0.00 0.00 2.69
4756 5092 3.934457 AGGCCCGTCAAACATTTTTAG 57.066 42.857 0.00 0.00 0.00 1.85
4757 5093 5.786264 TTTAGGCCCGTCAAACATTTTTA 57.214 34.783 0.00 0.00 0.00 1.52
4758 5094 4.674281 TTTAGGCCCGTCAAACATTTTT 57.326 36.364 0.00 0.00 0.00 1.94
4759 5095 4.882842 ATTTAGGCCCGTCAAACATTTT 57.117 36.364 0.00 0.00 0.00 1.82
4760 5096 4.882842 AATTTAGGCCCGTCAAACATTT 57.117 36.364 0.00 0.00 0.00 2.32
4761 5097 4.882842 AAATTTAGGCCCGTCAAACATT 57.117 36.364 0.00 0.00 0.00 2.71
4762 5098 5.258051 TCTAAATTTAGGCCCGTCAAACAT 58.742 37.500 22.11 0.00 0.00 2.71
4787 5123 1.917872 ACCCATGGCAAATACGTGTT 58.082 45.000 6.09 0.00 0.00 3.32
4852 5188 5.027460 TGCACTTATTTACTACTCCCTCCA 58.973 41.667 0.00 0.00 0.00 3.86
4881 5217 4.988598 ACAACGCTGCCTGTCCGG 62.989 66.667 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.