Multiple sequence alignment - TraesCS6A01G213000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G213000 chr6A 100.000 7042 0 0 1 7042 387222716 387229757 0.000000e+00 13005.0
1 TraesCS6A01G213000 chr6D 95.006 4145 164 19 1735 5856 270145653 270141529 0.000000e+00 6468.0
2 TraesCS6A01G213000 chr6D 88.031 1036 36 29 738 1733 270146750 270145763 0.000000e+00 1146.0
3 TraesCS6A01G213000 chr6D 88.470 451 32 6 6595 7042 270140890 270140457 1.740000e-145 527.0
4 TraesCS6A01G213000 chr6D 82.540 630 45 25 5885 6467 270141534 270140923 1.760000e-135 494.0
5 TraesCS6A01G213000 chr6B 91.892 3404 197 28 1512 4879 422708794 422705434 0.000000e+00 4684.0
6 TraesCS6A01G213000 chr6B 93.037 991 52 7 4876 5856 422705322 422704339 0.000000e+00 1432.0
7 TraesCS6A01G213000 chr6B 85.748 421 30 6 6595 7012 422693446 422693053 1.090000e-112 418.0
8 TraesCS6A01G213000 chr6B 86.755 302 18 12 1141 1441 422709092 422708812 4.100000e-82 316.0
9 TraesCS6A01G213000 chr6B 93.532 201 7 3 752 952 422709570 422709376 1.920000e-75 294.0
10 TraesCS6A01G213000 chr6B 80.920 435 25 18 6067 6466 422703910 422703499 2.480000e-74 291.0
11 TraesCS6A01G213000 chr6B 85.204 196 10 9 5885 6065 422704344 422704153 4.340000e-42 183.0
12 TraesCS6A01G213000 chr6B 96.296 54 2 0 1062 1115 422709146 422709093 9.730000e-14 89.8
13 TraesCS6A01G213000 chr7A 96.888 739 12 7 1 732 509521582 509522316 0.000000e+00 1227.0
14 TraesCS6A01G213000 chr7A 93.216 737 34 11 1 730 16011585 16012312 0.000000e+00 1070.0
15 TraesCS6A01G213000 chr5A 96.594 734 19 4 1 730 334531031 334531762 0.000000e+00 1212.0
16 TraesCS6A01G213000 chr5A 93.216 737 34 11 1 730 300961616 300962343 0.000000e+00 1070.0
17 TraesCS6A01G213000 chr3A 96.453 733 22 2 1 730 44767766 44767035 0.000000e+00 1206.0
18 TraesCS6A01G213000 chr3A 93.369 739 31 13 1 730 69954260 69954989 0.000000e+00 1077.0
19 TraesCS6A01G213000 chr3A 92.105 38 2 1 6971 7008 669974270 669974306 1.300000e-02 52.8
20 TraesCS6A01G213000 chr4B 94.952 733 30 3 1 730 649627200 649627928 0.000000e+00 1142.0
21 TraesCS6A01G213000 chr2A 93.001 743 35 12 1 735 728940361 728941094 0.000000e+00 1068.0
22 TraesCS6A01G213000 chr2A 93.099 739 34 11 1 730 148608831 148608101 0.000000e+00 1066.0
23 TraesCS6A01G213000 chr1A 91.111 45 3 1 6968 7012 461354344 461354387 7.630000e-05 60.2
24 TraesCS6A01G213000 chr5B 92.500 40 2 1 6971 7010 689559762 689559724 1.000000e-03 56.5
25 TraesCS6A01G213000 chr7D 92.308 39 2 1 6971 7009 17174458 17174421 4.000000e-03 54.7
26 TraesCS6A01G213000 chr7D 96.774 31 1 0 6968 6998 407067874 407067904 1.300000e-02 52.8
27 TraesCS6A01G213000 chr2D 96.774 31 1 0 6968 6998 601270036 601270066 1.300000e-02 52.8
28 TraesCS6A01G213000 chr1B 100.000 28 0 0 6971 6998 499195951 499195924 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G213000 chr6A 387222716 387229757 7041 False 13005.00 13005 100.000000 1 7042 1 chr6A.!!$F1 7041
1 TraesCS6A01G213000 chr6D 270140457 270146750 6293 True 2158.75 6468 88.511750 738 7042 4 chr6D.!!$R1 6304
2 TraesCS6A01G213000 chr6B 422703499 422709570 6071 True 1041.40 4684 89.662286 752 6466 7 chr6B.!!$R2 5714
3 TraesCS6A01G213000 chr7A 509521582 509522316 734 False 1227.00 1227 96.888000 1 732 1 chr7A.!!$F2 731
4 TraesCS6A01G213000 chr7A 16011585 16012312 727 False 1070.00 1070 93.216000 1 730 1 chr7A.!!$F1 729
5 TraesCS6A01G213000 chr5A 334531031 334531762 731 False 1212.00 1212 96.594000 1 730 1 chr5A.!!$F2 729
6 TraesCS6A01G213000 chr5A 300961616 300962343 727 False 1070.00 1070 93.216000 1 730 1 chr5A.!!$F1 729
7 TraesCS6A01G213000 chr3A 44767035 44767766 731 True 1206.00 1206 96.453000 1 730 1 chr3A.!!$R1 729
8 TraesCS6A01G213000 chr3A 69954260 69954989 729 False 1077.00 1077 93.369000 1 730 1 chr3A.!!$F1 729
9 TraesCS6A01G213000 chr4B 649627200 649627928 728 False 1142.00 1142 94.952000 1 730 1 chr4B.!!$F1 729
10 TraesCS6A01G213000 chr2A 728940361 728941094 733 False 1068.00 1068 93.001000 1 735 1 chr2A.!!$F1 734
11 TraesCS6A01G213000 chr2A 148608101 148608831 730 True 1066.00 1066 93.099000 1 730 1 chr2A.!!$R1 729

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
543 553 1.002134 CGTCTGGCCCCTTTGTCAT 60.002 57.895 0.00 0.00 0.00 3.06 F
1243 1409 0.173255 GGCGTTTCATTCATGGGGTG 59.827 55.000 0.00 0.00 0.00 4.61 F
1458 1625 0.033504 GTTTCTGTCTCGCACCCAGA 59.966 55.000 0.00 0.00 33.59 3.86 F
1754 2057 0.461961 TTTTCAAACGGGCACAAGGG 59.538 50.000 0.00 0.00 0.00 3.95 F
2181 2506 0.727398 GAAATGTCGAAGAAGGCGGG 59.273 55.000 0.00 0.00 39.69 6.13 F
2407 2738 0.820891 GCGGTGATGGGAAGATGCAT 60.821 55.000 0.00 0.00 0.00 3.96 F
4020 4366 0.806868 TTAGAATGCACTGCTGCTGC 59.193 50.000 8.89 8.89 44.57 5.25 F
5848 6325 0.109132 GCTGTATGTGGCCTTGTTGC 60.109 55.000 3.32 0.00 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1379 1546 0.179000 ATTACTTGCCCTGCTCCTCG 59.821 55.000 0.00 0.00 0.00 4.63 R
2199 2524 0.179000 ATCGTCATTGTGCCTCCTCC 59.821 55.000 0.00 0.00 0.00 4.30 R
2396 2727 0.548031 TCACCAGGATGCATCTTCCC 59.452 55.000 25.28 10.30 33.45 3.97 R
3673 4019 0.108804 CTAAAGGAGCTTCGTCGGCA 60.109 55.000 0.00 0.00 0.00 5.69 R
3831 4177 1.814394 GTGACAATGGAGCTGCATCAA 59.186 47.619 21.89 4.68 0.00 2.57 R
4107 4453 2.239907 ACAGTAGCCTCCTTCCATTTCC 59.760 50.000 0.00 0.00 0.00 3.13 R
5850 6327 0.107831 CCTCCGTTTCCAACACCTGA 59.892 55.000 0.00 0.00 0.00 3.86 R
6821 7604 0.674895 AAGCTAGACGGCAGCCTTTG 60.675 55.000 10.54 0.00 39.99 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
139 142 8.103935 TCCTATGGACAACATATACACAAAACA 58.896 33.333 0.00 0.00 41.07 2.83
504 514 1.156034 GCGTTATCCACTTACCGGGC 61.156 60.000 6.32 0.00 0.00 6.13
543 553 1.002134 CGTCTGGCCCCTTTGTCAT 60.002 57.895 0.00 0.00 0.00 3.06
732 746 5.998363 GGTCAGAACAGTAATTTTGTCCTCT 59.002 40.000 0.00 0.00 0.00 3.69
733 747 7.159372 GGTCAGAACAGTAATTTTGTCCTCTA 58.841 38.462 0.00 0.00 0.00 2.43
734 748 7.824779 GGTCAGAACAGTAATTTTGTCCTCTAT 59.175 37.037 0.00 0.00 0.00 1.98
735 749 8.660373 GTCAGAACAGTAATTTTGTCCTCTATG 58.340 37.037 0.00 0.00 0.00 2.23
736 750 7.334421 TCAGAACAGTAATTTTGTCCTCTATGC 59.666 37.037 0.00 0.00 0.00 3.14
745 759 1.333177 GTCCTCTATGCCGGATGAGT 58.667 55.000 5.05 0.00 0.00 3.41
798 812 2.103934 CTCCTCGAGGCGCAGAAG 59.896 66.667 27.39 13.77 34.44 2.85
1032 1053 3.065371 CGCTCTTAATACCCAGCCAAAAG 59.935 47.826 0.00 0.00 0.00 2.27
1036 1057 6.546034 GCTCTTAATACCCAGCCAAAAGAATA 59.454 38.462 0.00 0.00 0.00 1.75
1073 1238 3.481453 GAGCTCTTCACTTTTTCACCCT 58.519 45.455 6.43 0.00 0.00 4.34
1131 1296 4.507916 AGGCCTAGGAGAGCGCGA 62.508 66.667 14.75 0.00 0.00 5.87
1143 1308 1.211818 GAGCGCGATAGTTGCCAGAG 61.212 60.000 12.10 0.00 39.85 3.35
1243 1409 0.173255 GGCGTTTCATTCATGGGGTG 59.827 55.000 0.00 0.00 0.00 4.61
1245 1411 0.817013 CGTTTCATTCATGGGGTGGG 59.183 55.000 0.00 0.00 0.00 4.61
1254 1420 1.031571 CATGGGGTGGGTCAATCGTG 61.032 60.000 0.00 0.00 0.00 4.35
1291 1457 0.875059 CGAGTTCCTGGAGCCAAAAC 59.125 55.000 6.95 0.00 0.00 2.43
1297 1463 0.961753 CCTGGAGCCAAAACAAGGAC 59.038 55.000 0.00 0.00 0.00 3.85
1299 1465 2.224769 CCTGGAGCCAAAACAAGGACTA 60.225 50.000 0.00 0.00 0.00 2.59
1300 1466 3.077359 CTGGAGCCAAAACAAGGACTAG 58.923 50.000 0.00 0.00 0.00 2.57
1305 1471 5.046807 GGAGCCAAAACAAGGACTAGTAGTA 60.047 44.000 1.88 0.00 0.00 1.82
1307 1473 5.543020 AGCCAAAACAAGGACTAGTAGTACT 59.457 40.000 9.44 9.44 42.40 2.73
1308 1474 6.723052 AGCCAAAACAAGGACTAGTAGTACTA 59.277 38.462 15.68 9.66 38.80 1.82
1385 1552 6.494893 TTTTTATTGGATGTGTTCGAGGAG 57.505 37.500 0.00 0.00 0.00 3.69
1386 1553 2.029838 ATTGGATGTGTTCGAGGAGC 57.970 50.000 0.00 0.00 0.00 4.70
1387 1554 0.684535 TTGGATGTGTTCGAGGAGCA 59.315 50.000 0.00 0.00 0.00 4.26
1429 1596 2.681848 CACCCTTCACATTCTCATCTGC 59.318 50.000 0.00 0.00 0.00 4.26
1430 1597 2.575279 ACCCTTCACATTCTCATCTGCT 59.425 45.455 0.00 0.00 0.00 4.24
1431 1598 3.204526 CCCTTCACATTCTCATCTGCTC 58.795 50.000 0.00 0.00 0.00 4.26
1432 1599 3.204526 CCTTCACATTCTCATCTGCTCC 58.795 50.000 0.00 0.00 0.00 4.70
1433 1600 2.591571 TCACATTCTCATCTGCTCCG 57.408 50.000 0.00 0.00 0.00 4.63
1434 1601 1.827344 TCACATTCTCATCTGCTCCGT 59.173 47.619 0.00 0.00 0.00 4.69
1438 1605 2.136298 TTCTCATCTGCTCCGTCTCT 57.864 50.000 0.00 0.00 0.00 3.10
1441 1608 1.476085 CTCATCTGCTCCGTCTCTGTT 59.524 52.381 0.00 0.00 0.00 3.16
1458 1625 0.033504 GTTTCTGTCTCGCACCCAGA 59.966 55.000 0.00 0.00 33.59 3.86
1501 1673 4.118584 GCAAATGCCCCAGTCCTT 57.881 55.556 0.00 0.00 34.31 3.36
1503 1675 1.555967 GCAAATGCCCCAGTCCTTAA 58.444 50.000 0.00 0.00 34.31 1.85
1504 1676 1.204704 GCAAATGCCCCAGTCCTTAAC 59.795 52.381 0.00 0.00 34.31 2.01
1505 1677 2.524306 CAAATGCCCCAGTCCTTAACA 58.476 47.619 0.00 0.00 0.00 2.41
1506 1678 2.493278 CAAATGCCCCAGTCCTTAACAG 59.507 50.000 0.00 0.00 0.00 3.16
1508 1680 0.770557 TGCCCCAGTCCTTAACAGGT 60.771 55.000 0.00 0.00 41.69 4.00
1551 1724 1.077858 CCTGGAAGAGCAGCCCTTC 60.078 63.158 8.15 8.15 39.32 3.46
1626 1808 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1627 1809 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1628 1810 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1629 1811 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1640 1834 2.308570 AGAGAGAGAGAGTTCTGCTCCA 59.691 50.000 0.00 0.00 45.21 3.86
1643 1837 3.023119 GAGAGAGAGTTCTGCTCCATGA 58.977 50.000 0.00 0.00 45.21 3.07
1683 1877 1.818674 GAAGGGCACATCGGTCATTTT 59.181 47.619 0.00 0.00 0.00 1.82
1704 1899 7.996098 TTTTAAATCTGTGTTTAGAGAGGGG 57.004 36.000 0.00 0.00 28.75 4.79
1705 1900 4.576330 AAATCTGTGTTTAGAGAGGGGG 57.424 45.455 0.00 0.00 28.75 5.40
1706 1901 3.491766 ATCTGTGTTTAGAGAGGGGGA 57.508 47.619 0.00 0.00 28.75 4.81
1707 1902 3.491766 TCTGTGTTTAGAGAGGGGGAT 57.508 47.619 0.00 0.00 0.00 3.85
1710 1905 5.347124 TCTGTGTTTAGAGAGGGGGATTAA 58.653 41.667 0.00 0.00 0.00 1.40
1716 1911 6.555360 TGTTTAGAGAGGGGGATTAATCTCTC 59.445 42.308 14.94 16.89 43.92 3.20
1752 2055 2.820330 ACATTTTCAAACGGGCACAAG 58.180 42.857 0.00 0.00 0.00 3.16
1754 2057 0.461961 TTTTCAAACGGGCACAAGGG 59.538 50.000 0.00 0.00 0.00 3.95
1831 2134 8.885494 AGTACTAGTACTTCTGTTAGTATCGG 57.115 38.462 26.61 0.00 43.35 4.18
1936 2240 1.044611 GGGAGAGGATGAGTAGTGGC 58.955 60.000 0.00 0.00 0.00 5.01
2005 2321 0.753479 GCGAGGAGGAGGATGAGACA 60.753 60.000 0.00 0.00 0.00 3.41
2067 2392 0.843309 TGGGACAAGAAGGTGCAGAA 59.157 50.000 0.00 0.00 31.92 3.02
2181 2506 0.727398 GAAATGTCGAAGAAGGCGGG 59.273 55.000 0.00 0.00 39.69 6.13
2185 2510 1.964373 GTCGAAGAAGGCGGGCAAA 60.964 57.895 3.78 0.00 39.69 3.68
2199 2524 1.882623 GGGCAAACACAAGGAGAAGAG 59.117 52.381 0.00 0.00 0.00 2.85
2366 2697 2.269023 TCCATTCCAAGGAGAAGAGCA 58.731 47.619 0.00 0.00 0.00 4.26
2370 2701 1.270907 TCCAAGGAGAAGAGCAGGAC 58.729 55.000 0.00 0.00 0.00 3.85
2407 2738 0.820891 GCGGTGATGGGAAGATGCAT 60.821 55.000 0.00 0.00 0.00 3.96
2409 2740 1.613836 GGTGATGGGAAGATGCATCC 58.386 55.000 23.06 9.81 36.16 3.51
2442 2773 5.144359 CCACAACGATAACAAAAGCAGTAC 58.856 41.667 0.00 0.00 0.00 2.73
2479 2810 5.487488 TGAGTATGACAAGTACAAGGGGATT 59.513 40.000 0.00 0.00 0.00 3.01
2481 2812 3.713826 TGACAAGTACAAGGGGATTCC 57.286 47.619 0.00 0.00 0.00 3.01
2562 2893 4.086457 GAGGAGGAGAAGAAGAAGACAGT 58.914 47.826 0.00 0.00 0.00 3.55
2603 2934 1.541147 GCAAAATGCCTGTGCTAGACA 59.459 47.619 0.00 0.00 37.42 3.41
2627 2958 1.136891 GCAGCAACAAGGGAAACAAGT 59.863 47.619 0.00 0.00 0.00 3.16
2637 2968 3.821748 AGGGAAACAAGTGGAAGAAGAC 58.178 45.455 0.00 0.00 0.00 3.01
2645 2976 1.072331 AGTGGAAGAAGACGCCAATGT 59.928 47.619 0.00 0.00 32.68 2.71
2860 3194 5.366829 TGTCATCAGTTTTGCTCTTCATG 57.633 39.130 0.00 0.00 0.00 3.07
2922 3256 7.074502 GCATTTGCTCTTGCTCATATTAGTAC 58.925 38.462 0.00 0.00 40.48 2.73
2978 3312 3.386486 TCTTTGTGTGTACCGTGATGAC 58.614 45.455 0.00 0.00 0.00 3.06
3241 3575 2.052782 AGTTTTCTGTGCGGGTCTTT 57.947 45.000 0.00 0.00 0.00 2.52
3333 3670 3.382546 AGTTATGCACCTGATGATTTGGC 59.617 43.478 0.00 0.00 0.00 4.52
3390 3736 9.764363 TCATCACTATGTTTCTGGTGAATATAC 57.236 33.333 0.00 0.00 41.14 1.47
3406 3752 2.182516 ATACTAGGAGCAACAGGCCT 57.817 50.000 0.00 0.00 46.50 5.19
3430 3776 8.765219 CCTAAAACAAAGTCTGATGGATATACG 58.235 37.037 0.00 0.00 0.00 3.06
3436 3782 8.088981 ACAAAGTCTGATGGATATACGGATAAC 58.911 37.037 0.00 0.00 0.00 1.89
3451 3797 5.293535 CGGATAACGCTGAGGTTTCTCCT 62.294 52.174 10.40 0.00 42.57 3.69
3473 3819 8.506168 TCCTGGTAATTTAGTTGCTAAATCTG 57.494 34.615 12.69 6.64 43.27 2.90
3474 3820 7.067008 TCCTGGTAATTTAGTTGCTAAATCTGC 59.933 37.037 12.69 8.11 43.27 4.26
3516 3862 3.309682 CGTCGTATGTCTGCCAATTCAAT 59.690 43.478 0.00 0.00 0.00 2.57
3518 3864 5.332581 CGTCGTATGTCTGCCAATTCAATAG 60.333 44.000 0.00 0.00 0.00 1.73
3551 3897 2.075338 GAGTAGTAGGCGGGATCGTAG 58.925 57.143 0.00 0.00 38.89 3.51
3612 3958 1.926511 GCGAATGGGAAGCACACAGG 61.927 60.000 0.00 0.00 34.42 4.00
3663 4009 2.861147 ACTACAAGGAGCCCTGAAAC 57.139 50.000 0.00 0.00 32.13 2.78
3665 4011 2.039084 ACTACAAGGAGCCCTGAAACAG 59.961 50.000 0.00 0.00 32.13 3.16
3673 4019 3.826729 GGAGCCCTGAAACAGTTGTAATT 59.173 43.478 0.00 0.00 0.00 1.40
3676 4022 3.860754 GCCCTGAAACAGTTGTAATTGCC 60.861 47.826 0.00 0.00 0.00 4.52
3679 4025 4.217754 TGAAACAGTTGTAATTGCCGAC 57.782 40.909 0.00 0.00 0.00 4.79
3744 4090 6.500684 TGATAACAAGGAAGCAAATCTGAC 57.499 37.500 0.00 0.00 0.00 3.51
3779 4125 3.435105 AAACGAAGTGCAATGCTTCAA 57.565 38.095 6.82 0.00 45.00 2.69
3784 4130 4.216257 ACGAAGTGCAATGCTTCAATAACT 59.784 37.500 6.82 0.00 42.51 2.24
3800 4146 9.640974 CTTCAATAACTTGCAACAATGAAAAAG 57.359 29.630 0.00 0.00 32.11 2.27
3831 4177 6.387220 AGGCTTGATTTAGTCCCAGTTACTAT 59.613 38.462 0.00 0.00 29.86 2.12
3844 4190 4.445453 CAGTTACTATTGATGCAGCTCCA 58.555 43.478 2.53 0.00 0.00 3.86
3879 4225 1.482182 TGGTGATGCAGTCGAGCTAAT 59.518 47.619 0.00 0.00 34.99 1.73
3880 4226 1.863454 GGTGATGCAGTCGAGCTAATG 59.137 52.381 0.00 0.00 34.99 1.90
3888 4234 3.786818 GCAGTCGAGCTAATGACATTTGC 60.787 47.826 22.11 22.11 40.51 3.68
3905 4251 5.356190 ACATTTGCTGGTCACATAGAAGATG 59.644 40.000 0.00 0.00 0.00 2.90
4020 4366 0.806868 TTAGAATGCACTGCTGCTGC 59.193 50.000 8.89 8.89 44.57 5.25
4095 4441 6.944862 AGCAAATATGAATATCCAGGAGGTTC 59.055 38.462 8.92 8.92 35.89 3.62
4142 4488 2.428491 CTACTGTGAGTGGTCGAGAGT 58.572 52.381 0.00 0.00 0.00 3.24
4158 4504 2.495270 GAGAGTCTCTTGATGGCACTGA 59.505 50.000 13.17 0.00 0.00 3.41
4246 4592 1.092921 TTGAACGCGGGTATGATGGC 61.093 55.000 12.47 0.00 0.00 4.40
4772 5118 0.810031 CGTCCCGTATTGAAGGCCAG 60.810 60.000 5.01 0.00 0.00 4.85
4798 5144 0.883833 GTTCGTCGTCCCTTCTACCA 59.116 55.000 0.00 0.00 0.00 3.25
4967 5437 5.005875 GCTATCTTAGTGCTTTCGAAGGTTC 59.994 44.000 9.20 2.87 0.00 3.62
5024 5494 7.489113 ACTTGATGTTGTTCAAAGCTAAAGTTG 59.511 33.333 0.00 0.00 35.31 3.16
5109 5579 4.579869 GTGTAACCACCACATCAGATCTT 58.420 43.478 0.00 0.00 35.44 2.40
5155 5625 5.652891 AGTACATCTTCATCCTCGTGTAGTT 59.347 40.000 0.00 0.00 0.00 2.24
5177 5650 5.554437 TGTGTGTTGAGGTTTATCAGGTA 57.446 39.130 0.00 0.00 0.00 3.08
5178 5651 6.121776 TGTGTGTTGAGGTTTATCAGGTAT 57.878 37.500 0.00 0.00 0.00 2.73
5181 5654 8.158132 TGTGTGTTGAGGTTTATCAGGTATTTA 58.842 33.333 0.00 0.00 0.00 1.40
5217 5690 0.257039 ACCATTTAGCTGCCCCTCAG 59.743 55.000 0.00 0.00 45.62 3.35
5391 5864 1.633945 ACCTCCTTATTCGTGGGCTTT 59.366 47.619 0.00 0.00 0.00 3.51
5537 6010 5.566627 GCCATTGCTCTTTGGTAAAGCTTTA 60.567 40.000 14.96 14.96 38.39 1.85
5600 6076 8.811994 ACATTTATTTTGGCTAACACCTGTTAT 58.188 29.630 0.00 0.00 39.49 1.89
5633 6109 2.113807 TGCTGTAGAGGCAGTGATCAT 58.886 47.619 0.00 0.00 38.65 2.45
5636 6112 3.799574 GCTGTAGAGGCAGTGATCATCAG 60.800 52.174 0.00 5.33 38.65 2.90
5651 6127 3.959293 TCATCAGCATCAAGGAACATGT 58.041 40.909 0.00 0.00 0.00 3.21
5694 6170 2.767505 ACTTTTGACGAGGATGTGGTC 58.232 47.619 0.00 0.00 34.56 4.02
5710 6186 5.538849 TGTGGTCTACATCTTTGTGTGTA 57.461 39.130 0.00 0.00 36.53 2.90
5712 6188 7.234661 TGTGGTCTACATCTTTGTGTGTATA 57.765 36.000 0.00 0.00 36.53 1.47
5715 6191 9.464714 GTGGTCTACATCTTTGTGTGTATATAG 57.535 37.037 0.00 0.00 36.53 1.31
5716 6192 9.197306 TGGTCTACATCTTTGTGTGTATATAGT 57.803 33.333 0.00 0.00 36.53 2.12
5718 6194 8.969267 GTCTACATCTTTGTGTGTATATAGTGC 58.031 37.037 0.00 0.00 36.53 4.40
5719 6195 6.828502 ACATCTTTGTGTGTATATAGTGCG 57.171 37.500 0.00 0.00 33.85 5.34
5798 6275 1.691196 TGTGAAACTCAAGCAAGGGG 58.309 50.000 0.00 0.00 38.04 4.79
5814 6291 2.750814 AGGGGCATGTTATTTTGGAGG 58.249 47.619 0.00 0.00 0.00 4.30
5828 6305 1.434188 TGGAGGAGTGAAGCAGGAAA 58.566 50.000 0.00 0.00 0.00 3.13
5829 6306 1.349026 TGGAGGAGTGAAGCAGGAAAG 59.651 52.381 0.00 0.00 0.00 2.62
5830 6307 1.447945 GAGGAGTGAAGCAGGAAAGC 58.552 55.000 0.00 0.00 0.00 3.51
5832 6309 1.163554 GGAGTGAAGCAGGAAAGCTG 58.836 55.000 0.00 0.00 45.89 4.24
5833 6310 1.544314 GGAGTGAAGCAGGAAAGCTGT 60.544 52.381 0.00 0.00 45.89 4.40
5834 6311 2.289694 GGAGTGAAGCAGGAAAGCTGTA 60.290 50.000 0.00 0.00 45.89 2.74
5835 6312 3.604582 GAGTGAAGCAGGAAAGCTGTAT 58.395 45.455 0.00 0.00 45.89 2.29
5836 6313 3.341823 AGTGAAGCAGGAAAGCTGTATG 58.658 45.455 0.00 0.00 45.89 2.39
5837 6314 3.077359 GTGAAGCAGGAAAGCTGTATGT 58.923 45.455 0.00 0.00 45.89 2.29
5838 6315 3.076621 TGAAGCAGGAAAGCTGTATGTG 58.923 45.455 0.00 0.00 45.89 3.21
5839 6316 2.119801 AGCAGGAAAGCTGTATGTGG 57.880 50.000 0.00 0.00 44.66 4.17
5840 6317 0.453390 GCAGGAAAGCTGTATGTGGC 59.547 55.000 0.00 0.00 0.00 5.01
5841 6318 1.098050 CAGGAAAGCTGTATGTGGCC 58.902 55.000 0.00 0.00 0.00 5.36
5842 6319 0.995024 AGGAAAGCTGTATGTGGCCT 59.005 50.000 3.32 0.00 0.00 5.19
5843 6320 1.355720 AGGAAAGCTGTATGTGGCCTT 59.644 47.619 3.32 0.00 0.00 4.35
5844 6321 1.474077 GGAAAGCTGTATGTGGCCTTG 59.526 52.381 3.32 0.00 0.00 3.61
5845 6322 2.162681 GAAAGCTGTATGTGGCCTTGT 58.837 47.619 3.32 0.00 0.00 3.16
5846 6323 2.292828 AAGCTGTATGTGGCCTTGTT 57.707 45.000 3.32 0.00 0.00 2.83
5847 6324 1.538047 AGCTGTATGTGGCCTTGTTG 58.462 50.000 3.32 0.00 0.00 3.33
5848 6325 0.109132 GCTGTATGTGGCCTTGTTGC 60.109 55.000 3.32 0.00 0.00 4.17
5849 6326 1.246649 CTGTATGTGGCCTTGTTGCA 58.753 50.000 3.32 0.00 0.00 4.08
5850 6327 1.820519 CTGTATGTGGCCTTGTTGCAT 59.179 47.619 3.32 1.75 0.00 3.96
5851 6328 1.818060 TGTATGTGGCCTTGTTGCATC 59.182 47.619 3.32 0.00 0.00 3.91
5852 6329 1.818060 GTATGTGGCCTTGTTGCATCA 59.182 47.619 3.32 0.00 0.00 3.07
5853 6330 0.892755 ATGTGGCCTTGTTGCATCAG 59.107 50.000 3.32 0.00 0.00 2.90
5854 6331 1.180456 TGTGGCCTTGTTGCATCAGG 61.180 55.000 3.32 0.05 0.00 3.86
5855 6332 1.153524 TGGCCTTGTTGCATCAGGT 59.846 52.632 3.32 0.00 0.00 4.00
5856 6333 1.180456 TGGCCTTGTTGCATCAGGTG 61.180 55.000 3.32 0.04 0.00 4.00
5857 6334 1.181098 GGCCTTGTTGCATCAGGTGT 61.181 55.000 0.00 0.00 0.00 4.16
5858 6335 0.675633 GCCTTGTTGCATCAGGTGTT 59.324 50.000 6.20 0.00 0.00 3.32
5859 6336 1.603678 GCCTTGTTGCATCAGGTGTTG 60.604 52.381 6.20 0.00 0.00 3.33
5860 6337 1.000060 CCTTGTTGCATCAGGTGTTGG 60.000 52.381 6.20 0.00 0.00 3.77
5861 6338 1.955778 CTTGTTGCATCAGGTGTTGGA 59.044 47.619 0.00 0.00 0.00 3.53
5862 6339 2.064434 TGTTGCATCAGGTGTTGGAA 57.936 45.000 0.00 0.00 0.00 3.53
5863 6340 2.382882 TGTTGCATCAGGTGTTGGAAA 58.617 42.857 0.00 0.00 29.23 3.13
5875 6352 1.892209 GTTGGAAACGGAGGATGTGT 58.108 50.000 0.00 0.00 36.92 3.72
5876 6353 3.048337 GTTGGAAACGGAGGATGTGTA 57.952 47.619 0.00 0.00 36.92 2.90
5877 6354 3.404899 GTTGGAAACGGAGGATGTGTAA 58.595 45.455 0.00 0.00 36.92 2.41
5878 6355 3.048337 TGGAAACGGAGGATGTGTAAC 57.952 47.619 0.00 0.00 37.35 2.50
5879 6356 2.289819 TGGAAACGGAGGATGTGTAACC 60.290 50.000 0.00 0.00 34.36 2.85
5880 6357 2.027469 GGAAACGGAGGATGTGTAACCT 60.027 50.000 0.00 0.00 39.41 3.50
5881 6358 3.196254 GGAAACGGAGGATGTGTAACCTA 59.804 47.826 0.00 0.00 36.57 3.08
5882 6359 4.141779 GGAAACGGAGGATGTGTAACCTAT 60.142 45.833 0.00 0.00 36.57 2.57
5883 6360 4.667519 AACGGAGGATGTGTAACCTATC 57.332 45.455 0.00 0.00 36.57 2.08
5965 6442 5.671493 ACCTTGGATCGGTTTATGTAGAAG 58.329 41.667 0.00 0.00 0.00 2.85
5966 6443 5.057149 CCTTGGATCGGTTTATGTAGAAGG 58.943 45.833 0.00 0.00 0.00 3.46
5967 6444 5.163343 CCTTGGATCGGTTTATGTAGAAGGA 60.163 44.000 0.00 0.00 0.00 3.36
5968 6445 5.531122 TGGATCGGTTTATGTAGAAGGAG 57.469 43.478 0.00 0.00 0.00 3.69
5985 6462 1.895131 GGAGCCATGACCATGTGTTTT 59.105 47.619 8.93 0.00 37.11 2.43
6041 6533 2.515523 CCCAGATGGCAAGCCTCG 60.516 66.667 12.96 4.62 36.94 4.63
6065 6557 1.807142 GACAGAAAGGGTGCTTGTAGC 59.193 52.381 0.00 0.00 42.82 3.58
6092 6825 1.927174 CTGTAGTCGCCTGAATTTCCG 59.073 52.381 0.00 0.00 0.00 4.30
6095 6828 2.295253 AGTCGCCTGAATTTCCGTAG 57.705 50.000 0.00 0.00 0.00 3.51
6122 6864 2.557924 GTTGGTTGCCATCAGATTGTGA 59.442 45.455 0.00 0.00 40.38 3.58
6138 6880 2.820178 TGTGATCTCAGAAGTAGGGCA 58.180 47.619 0.00 0.00 0.00 5.36
6142 6884 0.461548 TCTCAGAAGTAGGGCATGCG 59.538 55.000 12.44 0.00 0.00 4.73
6154 6896 2.440796 CATGCGGAATGCCCAGGT 60.441 61.111 0.00 0.00 45.60 4.00
6155 6897 2.124151 ATGCGGAATGCCCAGGTC 60.124 61.111 0.00 0.00 45.60 3.85
6156 6898 3.721370 ATGCGGAATGCCCAGGTCC 62.721 63.158 0.00 0.00 45.60 4.46
6202 6950 0.178998 CCCTCCATCTGCCCAGATTG 60.179 60.000 8.01 5.64 45.31 2.67
6291 7039 1.136891 CCGGGGGAATCATTTTCAAGC 59.863 52.381 0.00 0.00 0.00 4.01
6292 7040 2.102578 CGGGGGAATCATTTTCAAGCT 58.897 47.619 0.00 0.00 0.00 3.74
6293 7041 2.497273 CGGGGGAATCATTTTCAAGCTT 59.503 45.455 0.00 0.00 0.00 3.74
6294 7042 3.429410 CGGGGGAATCATTTTCAAGCTTC 60.429 47.826 0.00 0.00 0.00 3.86
6295 7043 3.515104 GGGGGAATCATTTTCAAGCTTCA 59.485 43.478 0.00 0.00 0.00 3.02
6296 7044 4.162888 GGGGGAATCATTTTCAAGCTTCAT 59.837 41.667 0.00 0.00 0.00 2.57
6297 7045 5.338626 GGGGGAATCATTTTCAAGCTTCATT 60.339 40.000 0.00 0.00 0.00 2.57
6298 7046 5.814188 GGGGAATCATTTTCAAGCTTCATTC 59.186 40.000 0.00 0.00 0.00 2.67
6299 7047 6.400568 GGGAATCATTTTCAAGCTTCATTCA 58.599 36.000 0.00 0.00 0.00 2.57
6300 7048 6.534079 GGGAATCATTTTCAAGCTTCATTCAG 59.466 38.462 0.00 0.00 0.00 3.02
6302 7050 4.813027 TCATTTTCAAGCTTCATTCAGGC 58.187 39.130 0.00 0.00 0.00 4.85
6303 7051 4.525487 TCATTTTCAAGCTTCATTCAGGCT 59.475 37.500 0.00 0.00 37.99 4.58
6304 7052 4.942761 TTTTCAAGCTTCATTCAGGCTT 57.057 36.364 0.00 0.00 45.57 4.35
6308 7056 2.125773 AGCTTCATTCAGGCTTGAGG 57.874 50.000 0.00 0.00 34.15 3.86
6309 7057 1.632409 AGCTTCATTCAGGCTTGAGGA 59.368 47.619 0.00 0.00 34.15 3.71
6310 7058 2.015587 GCTTCATTCAGGCTTGAGGAG 58.984 52.381 0.00 0.00 34.15 3.69
6311 7059 2.641305 CTTCATTCAGGCTTGAGGAGG 58.359 52.381 0.00 0.00 34.15 4.30
6312 7060 1.956869 TCATTCAGGCTTGAGGAGGA 58.043 50.000 0.00 0.00 34.15 3.71
6313 7061 1.836166 TCATTCAGGCTTGAGGAGGAG 59.164 52.381 0.00 0.00 34.15 3.69
6314 7062 1.558756 CATTCAGGCTTGAGGAGGAGT 59.441 52.381 0.00 0.00 34.15 3.85
6315 7063 1.734655 TTCAGGCTTGAGGAGGAGTT 58.265 50.000 0.00 0.00 34.15 3.01
6321 7069 0.979665 CTTGAGGAGGAGTTGGCAGA 59.020 55.000 0.00 0.00 0.00 4.26
6334 7082 2.032681 GCAGAGGTTGGCGGTCTT 59.967 61.111 0.00 0.00 0.00 3.01
6335 7083 2.035442 GCAGAGGTTGGCGGTCTTC 61.035 63.158 0.00 0.00 0.00 2.87
6336 7084 1.376037 CAGAGGTTGGCGGTCTTCC 60.376 63.158 0.00 0.00 0.00 3.46
6337 7085 1.536662 AGAGGTTGGCGGTCTTCCT 60.537 57.895 0.00 0.00 0.00 3.36
6338 7086 1.079057 GAGGTTGGCGGTCTTCCTC 60.079 63.158 7.59 7.59 37.98 3.71
6339 7087 2.434359 GGTTGGCGGTCTTCCTCG 60.434 66.667 0.00 0.00 0.00 4.63
6416 7198 0.524816 GCTTGCCATCGCATTCACAG 60.525 55.000 0.00 0.00 46.67 3.66
6467 7250 2.031465 TTCCGTGGAAACGCCTCC 59.969 61.111 0.00 0.00 37.65 4.30
6468 7251 3.869473 TTCCGTGGAAACGCCTCCG 62.869 63.158 0.00 0.00 38.44 4.63
6469 7252 4.367023 CCGTGGAAACGCCTCCGA 62.367 66.667 0.00 0.00 38.44 4.55
6470 7253 3.110178 CGTGGAAACGCCTCCGAC 61.110 66.667 0.00 0.00 38.44 4.79
6471 7254 3.110178 GTGGAAACGCCTCCGACG 61.110 66.667 0.00 0.00 38.44 5.12
6472 7255 4.367023 TGGAAACGCCTCCGACGG 62.367 66.667 7.84 7.84 38.44 4.79
6480 7263 4.473520 CCTCCGACGGGCTGCATT 62.474 66.667 15.25 0.00 0.00 3.56
6481 7264 2.436646 CTCCGACGGGCTGCATTT 60.437 61.111 15.25 0.00 0.00 2.32
6482 7265 2.033448 TCCGACGGGCTGCATTTT 59.967 55.556 15.25 0.00 0.00 1.82
6483 7266 1.982073 CTCCGACGGGCTGCATTTTC 61.982 60.000 15.25 0.00 0.00 2.29
6484 7267 2.485122 CGACGGGCTGCATTTTCC 59.515 61.111 0.50 0.00 0.00 3.13
6485 7268 2.040544 CGACGGGCTGCATTTTCCT 61.041 57.895 0.50 0.00 0.00 3.36
6486 7269 1.803289 GACGGGCTGCATTTTCCTC 59.197 57.895 0.50 0.00 0.00 3.71
6487 7270 0.678048 GACGGGCTGCATTTTCCTCT 60.678 55.000 0.50 0.00 0.00 3.69
6488 7271 0.251341 ACGGGCTGCATTTTCCTCTT 60.251 50.000 0.50 0.00 0.00 2.85
6489 7272 0.453390 CGGGCTGCATTTTCCTCTTC 59.547 55.000 0.50 0.00 0.00 2.87
6490 7273 1.844687 GGGCTGCATTTTCCTCTTCT 58.155 50.000 0.50 0.00 0.00 2.85
6491 7274 2.174360 GGGCTGCATTTTCCTCTTCTT 58.826 47.619 0.50 0.00 0.00 2.52
6492 7275 2.165234 GGGCTGCATTTTCCTCTTCTTC 59.835 50.000 0.50 0.00 0.00 2.87
6493 7276 3.087781 GGCTGCATTTTCCTCTTCTTCT 58.912 45.455 0.50 0.00 0.00 2.85
6494 7277 3.509184 GGCTGCATTTTCCTCTTCTTCTT 59.491 43.478 0.50 0.00 0.00 2.52
6508 7291 8.651389 TCCTCTTCTTCTTTTCTTCTTCATGTA 58.349 33.333 0.00 0.00 0.00 2.29
6509 7292 9.447157 CCTCTTCTTCTTTTCTTCTTCATGTAT 57.553 33.333 0.00 0.00 0.00 2.29
6542 7325 5.963214 ATATACTTAGGGACCAACGGTTT 57.037 39.130 0.00 0.00 35.25 3.27
6551 7334 4.295381 CAACGGTTTGGACGCAAC 57.705 55.556 0.00 0.00 34.00 4.17
6552 7335 1.429825 CAACGGTTTGGACGCAACA 59.570 52.632 0.00 0.00 34.00 3.33
6553 7336 0.591236 CAACGGTTTGGACGCAACAG 60.591 55.000 0.00 0.00 34.00 3.16
6554 7337 1.720694 AACGGTTTGGACGCAACAGG 61.721 55.000 0.00 0.00 34.00 4.00
6555 7338 2.184167 CGGTTTGGACGCAACAGGT 61.184 57.895 0.00 0.00 0.00 4.00
6556 7339 1.720694 CGGTTTGGACGCAACAGGTT 61.721 55.000 0.00 0.00 0.00 3.50
6557 7340 0.248866 GGTTTGGACGCAACAGGTTG 60.249 55.000 7.77 7.77 43.14 3.77
6566 7349 2.853457 CAACAGGTTGCGTGTTTCG 58.147 52.632 0.00 0.00 39.86 3.46
6567 7350 0.098025 CAACAGGTTGCGTGTTTCGT 59.902 50.000 0.00 0.00 39.86 3.85
6568 7351 0.098025 AACAGGTTGCGTGTTTCGTG 59.902 50.000 1.95 0.00 38.99 4.35
6569 7352 1.010125 CAGGTTGCGTGTTTCGTGG 60.010 57.895 0.00 0.00 42.13 4.94
6570 7353 2.353030 GGTTGCGTGTTTCGTGGC 60.353 61.111 0.00 0.00 42.13 5.01
6571 7354 2.405594 GTTGCGTGTTTCGTGGCA 59.594 55.556 0.00 0.00 42.13 4.92
6572 7355 1.008995 GTTGCGTGTTTCGTGGCAT 60.009 52.632 0.00 0.00 42.13 4.40
6573 7356 0.236187 GTTGCGTGTTTCGTGGCATA 59.764 50.000 0.00 0.00 42.13 3.14
6574 7357 0.515127 TTGCGTGTTTCGTGGCATAG 59.485 50.000 0.00 0.00 42.13 2.23
6575 7358 1.226018 GCGTGTTTCGTGGCATAGC 60.226 57.895 0.00 0.00 42.13 2.97
6576 7359 1.906994 GCGTGTTTCGTGGCATAGCA 61.907 55.000 0.00 0.00 42.13 3.49
6577 7360 0.179225 CGTGTTTCGTGGCATAGCAC 60.179 55.000 0.00 0.00 34.52 4.40
6578 7361 0.871722 GTGTTTCGTGGCATAGCACA 59.128 50.000 0.00 0.00 0.00 4.57
6579 7362 0.871722 TGTTTCGTGGCATAGCACAC 59.128 50.000 0.00 0.00 0.00 3.82
6580 7363 0.871722 GTTTCGTGGCATAGCACACA 59.128 50.000 0.00 0.00 37.45 3.72
6581 7364 1.265635 GTTTCGTGGCATAGCACACAA 59.734 47.619 0.00 3.28 37.45 3.33
6582 7365 1.155889 TTCGTGGCATAGCACACAAG 58.844 50.000 0.00 0.00 37.45 3.16
6583 7366 1.135315 CGTGGCATAGCACACAAGC 59.865 57.895 0.00 0.00 37.45 4.01
6584 7367 1.135315 GTGGCATAGCACACAAGCG 59.865 57.895 0.00 0.00 40.15 4.68
6585 7368 1.003959 TGGCATAGCACACAAGCGA 60.004 52.632 0.00 0.00 40.15 4.93
6586 7369 0.392863 TGGCATAGCACACAAGCGAT 60.393 50.000 0.00 0.00 40.15 4.58
6587 7370 1.134551 TGGCATAGCACACAAGCGATA 60.135 47.619 0.00 0.00 40.15 2.92
6588 7371 1.261619 GGCATAGCACACAAGCGATAC 59.738 52.381 0.00 0.00 40.15 2.24
6589 7372 1.933181 GCATAGCACACAAGCGATACA 59.067 47.619 0.00 0.00 40.15 2.29
6590 7373 2.285834 GCATAGCACACAAGCGATACAC 60.286 50.000 0.00 0.00 40.15 2.90
6591 7374 1.624487 TAGCACACAAGCGATACACG 58.376 50.000 0.00 0.00 45.66 4.49
6592 7375 0.038618 AGCACACAAGCGATACACGA 60.039 50.000 0.00 0.00 45.77 4.35
6593 7376 0.999406 GCACACAAGCGATACACGAT 59.001 50.000 0.00 0.00 45.77 3.73
6594 7377 1.267038 GCACACAAGCGATACACGATG 60.267 52.381 0.00 0.00 45.77 3.84
6595 7378 1.992667 CACACAAGCGATACACGATGT 59.007 47.619 0.00 0.00 45.77 3.06
6596 7379 2.411748 CACACAAGCGATACACGATGTT 59.588 45.455 0.00 0.00 45.77 2.71
6597 7380 2.411748 ACACAAGCGATACACGATGTTG 59.588 45.455 0.00 0.00 45.77 3.33
6598 7381 1.999735 ACAAGCGATACACGATGTTGG 59.000 47.619 0.00 0.00 45.77 3.77
6599 7382 2.267426 CAAGCGATACACGATGTTGGA 58.733 47.619 0.00 0.00 45.77 3.53
6642 7425 7.381139 GTGACTGTGAGTAGAGAAAGAAAGAAG 59.619 40.741 0.00 0.00 0.00 2.85
6666 7449 3.764049 GTCTGCCGTCGACGCAAC 61.764 66.667 31.73 23.85 38.18 4.17
6680 7463 1.067915 ACGCAACCATACCAAACATGC 60.068 47.619 0.00 0.00 0.00 4.06
6681 7464 1.067985 CGCAACCATACCAAACATGCA 60.068 47.619 0.00 0.00 32.80 3.96
6682 7465 2.417107 CGCAACCATACCAAACATGCAT 60.417 45.455 0.00 0.00 32.80 3.96
6683 7466 2.931325 GCAACCATACCAAACATGCATG 59.069 45.455 25.09 25.09 32.80 4.06
6687 7470 3.056678 ACCATACCAAACATGCATGTGTG 60.057 43.478 34.18 34.18 43.95 3.82
6730 7513 1.153524 TGCAAAGAGTGTGGCCCAT 59.846 52.632 0.00 0.00 0.00 4.00
6734 7517 1.542915 CAAAGAGTGTGGCCCATCAAG 59.457 52.381 0.00 0.00 0.00 3.02
6735 7518 0.610232 AAGAGTGTGGCCCATCAAGC 60.610 55.000 0.00 0.00 0.00 4.01
6736 7519 2.360350 AGTGTGGCCCATCAAGCG 60.360 61.111 0.00 0.00 0.00 4.68
6737 7520 2.672996 GTGTGGCCCATCAAGCGT 60.673 61.111 0.00 0.00 0.00 5.07
6738 7521 2.672651 TGTGGCCCATCAAGCGTG 60.673 61.111 0.00 0.00 0.00 5.34
6739 7522 4.120331 GTGGCCCATCAAGCGTGC 62.120 66.667 0.00 0.00 0.00 5.34
6768 7551 2.363683 GTGGCTCTTCTTCAATCCTGG 58.636 52.381 0.00 0.00 0.00 4.45
6797 7580 4.934942 CGTCACCGACCGTGTGCA 62.935 66.667 6.28 0.00 43.51 4.57
6812 7595 2.349275 GTGTGCATGCCATGTTTTATGC 59.651 45.455 16.68 11.48 44.56 3.14
6817 7600 2.627863 TGCCATGTTTTATGCGTCAC 57.372 45.000 0.00 0.00 0.00 3.67
6818 7601 1.882623 TGCCATGTTTTATGCGTCACA 59.117 42.857 0.00 0.00 0.00 3.58
6821 7604 2.853594 CCATGTTTTATGCGTCACATGC 59.146 45.455 15.60 0.00 43.47 4.06
6826 7609 2.917701 TTATGCGTCACATGCAAAGG 57.082 45.000 0.00 0.00 44.15 3.11
6828 7611 1.246056 ATGCGTCACATGCAAAGGCT 61.246 50.000 0.00 0.00 44.15 4.58
6839 7622 1.078848 CAAAGGCTGCCGTCTAGCT 60.079 57.895 13.96 0.00 40.92 3.32
6847 7630 2.036089 GCTGCCGTCTAGCTTATAACCT 59.964 50.000 0.00 0.00 38.14 3.50
6882 7665 3.492383 CCATTTCGATCCATCAAGTCGAG 59.508 47.826 0.00 0.00 44.08 4.04
6917 7702 0.469917 ACCAACCTCATATGCTCCCG 59.530 55.000 0.00 0.00 0.00 5.14
6924 7709 3.766591 ACCTCATATGCTCCCGATTCTAG 59.233 47.826 0.00 0.00 0.00 2.43
6962 7747 4.360889 TGTCCCCCAAAAATGCTGATATT 58.639 39.130 0.00 0.00 0.00 1.28
6973 7758 7.591006 AAAATGCTGATATTTGCTTTGTGAG 57.409 32.000 3.24 0.00 31.05 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
540 550 0.320683 CCGTTGACCTGCTGACATGA 60.321 55.000 0.00 0.00 0.00 3.07
543 553 2.425592 CCCGTTGACCTGCTGACA 59.574 61.111 0.00 0.00 0.00 3.58
602 612 1.272769 GTCTGGGTTACGAAGCAGACT 59.727 52.381 0.00 0.00 35.80 3.24
732 746 0.668535 CACTCGACTCATCCGGCATA 59.331 55.000 0.00 0.00 0.00 3.14
733 747 1.323271 ACACTCGACTCATCCGGCAT 61.323 55.000 0.00 0.00 0.00 4.40
734 748 1.977009 ACACTCGACTCATCCGGCA 60.977 57.895 0.00 0.00 0.00 5.69
735 749 1.517257 CACACTCGACTCATCCGGC 60.517 63.158 0.00 0.00 0.00 6.13
736 750 1.517257 GCACACTCGACTCATCCGG 60.517 63.158 0.00 0.00 0.00 5.14
745 759 2.255554 GACTCTGCGCACACTCGA 59.744 61.111 5.66 0.00 0.00 4.04
798 812 1.376553 GACTGCTGGTCTTCTGCCC 60.377 63.158 0.00 0.00 41.46 5.36
835 849 1.061570 CGAAGCTCGAATTGGCAGC 59.938 57.895 0.00 4.52 43.74 5.25
909 923 3.489513 CGGGAGGGATGGGGTTCC 61.490 72.222 0.00 0.00 34.83 3.62
910 924 2.306384 AACGGGAGGGATGGGGTTC 61.306 63.158 0.00 0.00 0.00 3.62
911 925 2.204244 AACGGGAGGGATGGGGTT 60.204 61.111 0.00 0.00 0.00 4.11
912 926 3.015145 CAACGGGAGGGATGGGGT 61.015 66.667 0.00 0.00 0.00 4.95
913 927 3.015145 ACAACGGGAGGGATGGGG 61.015 66.667 0.00 0.00 0.00 4.96
1073 1238 0.332293 TGCCAAAGCCAGGATGATCA 59.668 50.000 0.00 0.00 38.69 2.92
1117 1282 1.068885 CAACTATCGCGCTCTCCTAGG 60.069 57.143 5.56 0.82 0.00 3.02
1118 1283 1.664588 GCAACTATCGCGCTCTCCTAG 60.665 57.143 5.56 1.58 0.00 3.02
1119 1284 0.311165 GCAACTATCGCGCTCTCCTA 59.689 55.000 5.56 0.00 0.00 2.94
1120 1285 1.066587 GCAACTATCGCGCTCTCCT 59.933 57.895 5.56 0.00 0.00 3.69
1121 1286 1.951631 GGCAACTATCGCGCTCTCC 60.952 63.158 5.56 0.00 0.00 3.71
1122 1287 1.211818 CTGGCAACTATCGCGCTCTC 61.212 60.000 5.56 0.00 37.61 3.20
1131 1296 0.044855 AGGGGGTCTCTGGCAACTAT 59.955 55.000 0.00 0.00 37.61 2.12
1143 1308 1.004745 TCAAGAAAGCATCAGGGGGTC 59.995 52.381 0.00 0.00 0.00 4.46
1243 1409 0.963856 GAAACCCCCACGATTGACCC 60.964 60.000 0.00 0.00 0.00 4.46
1245 1411 1.905637 AAGAAACCCCCACGATTGAC 58.094 50.000 0.00 0.00 0.00 3.18
1254 1420 1.280998 TCGAGGATCAAAGAAACCCCC 59.719 52.381 0.00 0.00 33.17 5.40
1299 1465 4.789702 AGGACCAGGAGAACTAGTACTACT 59.210 45.833 0.00 0.00 0.00 2.57
1300 1466 4.883006 CAGGACCAGGAGAACTAGTACTAC 59.117 50.000 0.00 0.00 0.00 2.73
1305 1471 1.273324 CCCAGGACCAGGAGAACTAGT 60.273 57.143 4.06 0.00 0.00 2.57
1307 1473 1.089978 TCCCAGGACCAGGAGAACTA 58.910 55.000 4.06 0.00 0.00 2.24
1308 1474 1.868810 TCCCAGGACCAGGAGAACT 59.131 57.895 4.06 0.00 0.00 3.01
1309 1475 4.561155 TCCCAGGACCAGGAGAAC 57.439 61.111 4.06 0.00 0.00 3.01
1313 1479 0.719015 AATCTCTCCCAGGACCAGGA 59.281 55.000 4.06 3.69 0.00 3.86
1314 1480 1.488393 GAAATCTCTCCCAGGACCAGG 59.512 57.143 0.00 0.00 0.00 4.45
1315 1481 2.476199 AGAAATCTCTCCCAGGACCAG 58.524 52.381 0.00 0.00 0.00 4.00
1316 1482 2.573462 CAAGAAATCTCTCCCAGGACCA 59.427 50.000 0.00 0.00 0.00 4.02
1317 1483 2.573915 ACAAGAAATCTCTCCCAGGACC 59.426 50.000 0.00 0.00 0.00 4.46
1318 1484 3.604582 CACAAGAAATCTCTCCCAGGAC 58.395 50.000 0.00 0.00 0.00 3.85
1379 1546 0.179000 ATTACTTGCCCTGCTCCTCG 59.821 55.000 0.00 0.00 0.00 4.63
1380 1547 1.210478 TGATTACTTGCCCTGCTCCTC 59.790 52.381 0.00 0.00 0.00 3.71
1382 1549 1.210478 TCTGATTACTTGCCCTGCTCC 59.790 52.381 0.00 0.00 0.00 4.70
1384 1551 3.084786 GTTTCTGATTACTTGCCCTGCT 58.915 45.455 0.00 0.00 0.00 4.24
1385 1552 2.164422 GGTTTCTGATTACTTGCCCTGC 59.836 50.000 0.00 0.00 0.00 4.85
1386 1553 2.420022 CGGTTTCTGATTACTTGCCCTG 59.580 50.000 0.00 0.00 0.00 4.45
1387 1554 2.711542 CGGTTTCTGATTACTTGCCCT 58.288 47.619 0.00 0.00 0.00 5.19
1429 1596 2.413502 CGAGACAGAAACAGAGACGGAG 60.414 54.545 0.00 0.00 0.00 4.63
1430 1597 1.535896 CGAGACAGAAACAGAGACGGA 59.464 52.381 0.00 0.00 0.00 4.69
1431 1598 1.970447 CGAGACAGAAACAGAGACGG 58.030 55.000 0.00 0.00 0.00 4.79
1432 1599 1.332178 GCGAGACAGAAACAGAGACG 58.668 55.000 0.00 0.00 0.00 4.18
1433 1600 2.055100 GTGCGAGACAGAAACAGAGAC 58.945 52.381 0.00 0.00 0.00 3.36
1434 1601 1.000163 GGTGCGAGACAGAAACAGAGA 60.000 52.381 0.00 0.00 0.00 3.10
1438 1605 0.249868 CTGGGTGCGAGACAGAAACA 60.250 55.000 0.00 0.00 34.21 2.83
1441 1608 0.827925 ACTCTGGGTGCGAGACAGAA 60.828 55.000 0.00 0.00 40.39 3.02
1508 1680 2.119495 GAGAAATAGGTGGAGGCCTCA 58.881 52.381 33.29 17.15 39.94 3.86
1551 1724 4.460873 GCCCTCGCCGCGAAAAAG 62.461 66.667 17.53 4.82 34.74 2.27
1591 1773 3.386078 TCTCTCTCTCTCTCTCTCTCTGC 59.614 52.174 0.00 0.00 0.00 4.26
1626 1808 3.118482 TGGATTCATGGAGCAGAACTCTC 60.118 47.826 0.00 0.00 45.48 3.20
1627 1809 2.842496 TGGATTCATGGAGCAGAACTCT 59.158 45.455 0.00 0.00 45.48 3.24
1628 1810 3.272574 TGGATTCATGGAGCAGAACTC 57.727 47.619 0.00 0.00 45.45 3.01
1629 1811 3.726557 TTGGATTCATGGAGCAGAACT 57.273 42.857 0.00 0.00 0.00 3.01
1640 1834 1.475034 CCACCCGACGATTGGATTCAT 60.475 52.381 8.58 0.00 31.39 2.57
1643 1837 1.223487 CCCACCCGACGATTGGATT 59.777 57.895 14.36 0.00 31.39 3.01
1683 1877 5.347124 TCCCCCTCTCTAAACACAGATTTA 58.653 41.667 0.00 0.00 0.00 1.40
1704 1899 9.823647 TGACATTTGACTTAGAGAGATTAATCC 57.176 33.333 11.92 4.07 0.00 3.01
1710 1905 9.512588 AATGTTTGACATTTGACTTAGAGAGAT 57.487 29.630 0.66 0.00 45.80 2.75
1733 1928 2.134346 CCTTGTGCCCGTTTGAAAATG 58.866 47.619 0.00 0.00 0.00 2.32
1752 2055 3.401033 AAAGTACTTTGCAATTGCCCC 57.599 42.857 26.94 8.66 41.18 5.80
1754 2057 5.048013 AGGACTAAAGTACTTTGCAATTGCC 60.048 40.000 27.40 17.92 35.13 4.52
1947 2251 4.974438 TCCTGGGCCGGTTCTGGT 62.974 66.667 12.30 0.00 0.00 4.00
2067 2392 1.002134 CCAGTGAATGCCTTCCGGT 60.002 57.895 0.00 0.00 0.00 5.28
2074 2399 1.318158 CCAGGCTTCCAGTGAATGCC 61.318 60.000 0.00 0.00 41.35 4.40
2079 2404 0.979665 CTTCTCCAGGCTTCCAGTGA 59.020 55.000 0.00 0.00 0.00 3.41
2181 2506 2.810852 CTCCTCTTCTCCTTGTGTTTGC 59.189 50.000 0.00 0.00 0.00 3.68
2185 2510 2.534990 CTCCTCCTCTTCTCCTTGTGT 58.465 52.381 0.00 0.00 0.00 3.72
2199 2524 0.179000 ATCGTCATTGTGCCTCCTCC 59.821 55.000 0.00 0.00 0.00 4.30
2366 2697 2.437359 GCTGCTCGGCATTGTCCT 60.437 61.111 0.00 0.00 38.13 3.85
2396 2727 0.548031 TCACCAGGATGCATCTTCCC 59.452 55.000 25.28 10.30 33.45 3.97
2425 2756 5.248087 CACATCGTACTGCTTTTGTTATCG 58.752 41.667 0.00 0.00 0.00 2.92
2442 2773 2.952310 TCATACTCAGACCTCCACATCG 59.048 50.000 0.00 0.00 0.00 3.84
2544 2875 3.238597 AGCACTGTCTTCTTCTTCTCCT 58.761 45.455 0.00 0.00 0.00 3.69
2562 2893 1.757118 CCTCCTTGGATAGAACGAGCA 59.243 52.381 0.00 0.00 38.35 4.26
2594 2925 1.069636 GTTGCTGCTGTTGTCTAGCAC 60.070 52.381 0.00 0.00 45.52 4.40
2599 2930 1.027357 CCTTGTTGCTGCTGTTGTCT 58.973 50.000 0.00 0.00 0.00 3.41
2603 2934 1.136891 GTTTCCCTTGTTGCTGCTGTT 59.863 47.619 0.00 0.00 0.00 3.16
2627 2958 1.879380 CAACATTGGCGTCTTCTTCCA 59.121 47.619 0.00 0.00 0.00 3.53
2637 2968 4.574421 TCACCTTATCATACAACATTGGCG 59.426 41.667 0.00 0.00 0.00 5.69
2645 2976 5.116180 CGGCTTCTTCACCTTATCATACAA 58.884 41.667 0.00 0.00 0.00 2.41
2860 3194 9.793252 AAAGTCATGATAGCATAATGAAAACAC 57.207 29.630 0.00 0.00 32.38 3.32
2978 3312 0.869068 TGCACACCGATTAAACACCG 59.131 50.000 0.00 0.00 0.00 4.94
3038 3372 1.133199 AGTCAAGCCCACCATTTTGGA 60.133 47.619 0.00 0.00 40.96 3.53
3241 3575 1.198094 TCTCCCAAGAATCCGCACCA 61.198 55.000 0.00 0.00 0.00 4.17
3273 3607 0.934496 TTCACCTCGCGTTTCAACAG 59.066 50.000 5.77 0.00 0.00 3.16
3390 3736 3.010420 GTTTTAGGCCTGTTGCTCCTAG 58.990 50.000 17.99 0.00 40.92 3.02
3392 3738 1.144913 TGTTTTAGGCCTGTTGCTCCT 59.855 47.619 17.99 0.00 40.92 3.69
3406 3752 8.479689 TCCGTATATCCATCAGACTTTGTTTTA 58.520 33.333 0.00 0.00 0.00 1.52
3430 3776 2.552031 GGAGAAACCTCAGCGTTATCC 58.448 52.381 0.00 0.00 35.41 2.59
3451 3797 6.596106 TCGCAGATTTAGCAACTAAATTACCA 59.404 34.615 12.50 0.00 43.84 3.25
3452 3798 7.011828 TCGCAGATTTAGCAACTAAATTACC 57.988 36.000 12.50 2.77 43.84 2.85
3473 3819 1.377202 TCCCTGGAACTGCATTCGC 60.377 57.895 0.00 0.00 38.31 4.70
3474 3820 0.321564 TGTCCCTGGAACTGCATTCG 60.322 55.000 0.00 0.00 38.31 3.34
3637 3983 2.913617 AGGGCTCCTTGTAGTAGCTTTT 59.086 45.455 0.00 0.00 36.48 2.27
3642 3988 3.260884 TGTTTCAGGGCTCCTTGTAGTAG 59.739 47.826 0.00 0.00 0.00 2.57
3663 4009 2.724839 GCTTCGTCGGCAATTACAACTG 60.725 50.000 0.00 0.00 0.00 3.16
3665 4011 1.463444 AGCTTCGTCGGCAATTACAAC 59.537 47.619 0.00 0.00 0.00 3.32
3673 4019 0.108804 CTAAAGGAGCTTCGTCGGCA 60.109 55.000 0.00 0.00 0.00 5.69
3730 4076 3.091545 TCCAATGGTCAGATTTGCTTCC 58.908 45.455 0.00 0.00 0.00 3.46
3731 4077 4.012374 TCTCCAATGGTCAGATTTGCTTC 58.988 43.478 0.00 0.00 0.00 3.86
3744 4090 1.879380 TCGTTTTGCACTCTCCAATGG 59.121 47.619 0.00 0.00 0.00 3.16
3779 4125 7.280652 AGTTGCTTTTTCATTGTTGCAAGTTAT 59.719 29.630 0.00 0.00 39.93 1.89
3784 4130 5.523188 CCTAGTTGCTTTTTCATTGTTGCAA 59.477 36.000 0.00 0.00 37.96 4.08
3800 4146 3.628032 GGGACTAAATCAAGCCTAGTTGC 59.372 47.826 0.00 0.00 0.00 4.17
3814 4160 6.953101 TGCATCAATAGTAACTGGGACTAAA 58.047 36.000 0.00 0.00 33.24 1.85
3831 4177 1.814394 GTGACAATGGAGCTGCATCAA 59.186 47.619 21.89 4.68 0.00 2.57
3844 4190 5.221481 TGCATCACCATTTTCTTGTGACAAT 60.221 36.000 0.00 0.00 41.40 2.71
3879 4225 4.284829 TCTATGTGACCAGCAAATGTCA 57.715 40.909 0.00 0.00 39.08 3.58
3880 4226 4.937620 TCTTCTATGTGACCAGCAAATGTC 59.062 41.667 0.00 0.00 0.00 3.06
3888 4234 4.118410 GACTGCATCTTCTATGTGACCAG 58.882 47.826 0.00 0.00 0.00 4.00
3905 4251 5.609423 AGTAGATTCCTTCATCATGACTGC 58.391 41.667 0.00 0.00 0.00 4.40
4020 4366 6.189677 TGTTATTGCTAGGAAATTTGTCCG 57.810 37.500 0.00 0.00 43.03 4.79
4107 4453 2.239907 ACAGTAGCCTCCTTCCATTTCC 59.760 50.000 0.00 0.00 0.00 3.13
4142 4488 2.634453 TCAGTTCAGTGCCATCAAGAGA 59.366 45.455 0.00 0.00 0.00 3.10
4521 4867 2.191354 CTGCACGGTTGGCACTCATG 62.191 60.000 0.00 0.00 36.11 3.07
4524 4870 2.186826 AACTGCACGGTTGGCACTC 61.187 57.895 0.00 0.00 36.11 3.51
4547 4893 6.610830 AGATAGAATCAGTTCACCTGTCTGAT 59.389 38.462 0.00 0.00 46.54 2.90
4674 5020 2.139118 GGATTGCTAGACTTCGCATCC 58.861 52.381 0.00 6.22 35.85 3.51
4678 5024 0.933796 GCAGGATTGCTAGACTTCGC 59.066 55.000 0.00 0.00 46.95 4.70
4772 5118 2.428888 AGGGACGACGAACTGTAAAC 57.571 50.000 0.00 0.00 0.00 2.01
4798 5144 1.765314 ACTCACAAGCCTTGTCTGAGT 59.235 47.619 19.49 19.49 43.23 3.41
4967 5437 9.295214 CAGCGATCTTACCATATGTTCTATAAG 57.705 37.037 1.24 2.63 0.00 1.73
4982 5452 5.980116 ACATCAAGTGATACAGCGATCTTAC 59.020 40.000 0.00 0.00 32.63 2.34
5024 5494 0.788391 AGCTTTGTACGCACGCTTAC 59.212 50.000 0.00 0.00 30.43 2.34
5155 5625 4.431416 ACCTGATAAACCTCAACACACA 57.569 40.909 0.00 0.00 0.00 3.72
5177 5650 4.220602 GGTGCCAAGACTGAAACCATAAAT 59.779 41.667 0.00 0.00 31.50 1.40
5178 5651 3.572255 GGTGCCAAGACTGAAACCATAAA 59.428 43.478 0.00 0.00 31.50 1.40
5181 5654 1.133513 TGGTGCCAAGACTGAAACCAT 60.134 47.619 0.00 0.00 34.64 3.55
5217 5690 8.893727 ACAAGTTGATAGATAGTAAATGGTTGC 58.106 33.333 10.54 0.00 0.00 4.17
5256 5729 3.053095 AGAGTGGATCGGGTAACTCCTAA 60.053 47.826 0.00 0.00 39.92 2.69
5391 5864 0.988832 AAGATTTCCAGCCACCGGTA 59.011 50.000 6.87 0.00 0.00 4.02
5565 6038 3.862642 GCCAAAATAAATGTTGCCCGACA 60.863 43.478 0.00 0.00 0.00 4.35
5567 6040 2.564947 AGCCAAAATAAATGTTGCCCGA 59.435 40.909 0.00 0.00 0.00 5.14
5600 6076 2.514160 TCTACAGCATCAGGGGAGACTA 59.486 50.000 0.00 0.00 0.00 2.59
5601 6077 1.289231 TCTACAGCATCAGGGGAGACT 59.711 52.381 0.00 0.00 0.00 3.24
5602 6078 1.686052 CTCTACAGCATCAGGGGAGAC 59.314 57.143 0.00 0.00 0.00 3.36
5633 6109 4.216902 CAGAAACATGTTCCTTGATGCTGA 59.783 41.667 12.39 0.00 0.00 4.26
5636 6112 4.510038 ACAGAAACATGTTCCTTGATGC 57.490 40.909 12.39 0.00 0.00 3.91
5651 6127 1.211703 TCCAGCCACACAGAACAGAAA 59.788 47.619 0.00 0.00 0.00 2.52
5694 6170 7.358435 GCGCACTATATACACACAAAGATGTAG 60.358 40.741 0.30 0.00 37.82 2.74
5710 6186 0.826256 TCCAGGGTCGCGCACTATAT 60.826 55.000 8.75 0.00 0.00 0.86
5712 6188 2.298158 CTTCCAGGGTCGCGCACTAT 62.298 60.000 8.75 0.00 0.00 2.12
5715 6191 4.373116 TCTTCCAGGGTCGCGCAC 62.373 66.667 8.75 4.68 0.00 5.34
5716 6192 4.373116 GTCTTCCAGGGTCGCGCA 62.373 66.667 8.75 0.00 0.00 6.09
5719 6195 4.070552 AGCGTCTTCCAGGGTCGC 62.071 66.667 9.33 9.33 45.82 5.19
5798 6275 5.643379 TTCACTCCTCCAAAATAACATGC 57.357 39.130 0.00 0.00 0.00 4.06
5802 6279 4.156739 CCTGCTTCACTCCTCCAAAATAAC 59.843 45.833 0.00 0.00 0.00 1.89
5814 6291 1.889545 ACAGCTTTCCTGCTTCACTC 58.110 50.000 0.00 0.00 45.78 3.51
5828 6305 1.538047 CAACAAGGCCACATACAGCT 58.462 50.000 5.01 0.00 0.00 4.24
5829 6306 0.109132 GCAACAAGGCCACATACAGC 60.109 55.000 5.01 0.00 0.00 4.40
5830 6307 1.246649 TGCAACAAGGCCACATACAG 58.753 50.000 5.01 0.00 0.00 2.74
5831 6308 1.818060 GATGCAACAAGGCCACATACA 59.182 47.619 5.01 0.00 0.00 2.29
5832 6309 1.818060 TGATGCAACAAGGCCACATAC 59.182 47.619 5.01 0.00 0.00 2.39
5833 6310 2.093890 CTGATGCAACAAGGCCACATA 58.906 47.619 5.01 0.00 0.00 2.29
5834 6311 0.892755 CTGATGCAACAAGGCCACAT 59.107 50.000 5.01 0.00 0.00 3.21
5835 6312 1.180456 CCTGATGCAACAAGGCCACA 61.180 55.000 5.01 0.00 0.00 4.17
5836 6313 1.181098 ACCTGATGCAACAAGGCCAC 61.181 55.000 5.01 0.00 0.00 5.01
5837 6314 1.153524 ACCTGATGCAACAAGGCCA 59.846 52.632 5.01 0.00 0.00 5.36
5838 6315 1.181098 ACACCTGATGCAACAAGGCC 61.181 55.000 11.51 0.00 0.00 5.19
5839 6316 0.675633 AACACCTGATGCAACAAGGC 59.324 50.000 11.51 0.00 0.00 4.35
5840 6317 1.000060 CCAACACCTGATGCAACAAGG 60.000 52.381 10.32 10.32 0.00 3.61
5841 6318 1.955778 TCCAACACCTGATGCAACAAG 59.044 47.619 0.00 0.00 0.00 3.16
5842 6319 2.064434 TCCAACACCTGATGCAACAA 57.936 45.000 0.00 0.00 0.00 2.83
5843 6320 2.064434 TTCCAACACCTGATGCAACA 57.936 45.000 0.00 0.00 0.00 3.33
5844 6321 2.742774 GTTTCCAACACCTGATGCAAC 58.257 47.619 0.00 0.00 0.00 4.17
5845 6322 1.336440 CGTTTCCAACACCTGATGCAA 59.664 47.619 0.00 0.00 0.00 4.08
5846 6323 0.950836 CGTTTCCAACACCTGATGCA 59.049 50.000 0.00 0.00 0.00 3.96
5847 6324 0.240945 CCGTTTCCAACACCTGATGC 59.759 55.000 0.00 0.00 0.00 3.91
5848 6325 1.806542 CTCCGTTTCCAACACCTGATG 59.193 52.381 0.00 0.00 0.00 3.07
5849 6326 1.271379 CCTCCGTTTCCAACACCTGAT 60.271 52.381 0.00 0.00 0.00 2.90
5850 6327 0.107831 CCTCCGTTTCCAACACCTGA 59.892 55.000 0.00 0.00 0.00 3.86
5851 6328 0.107831 TCCTCCGTTTCCAACACCTG 59.892 55.000 0.00 0.00 0.00 4.00
5852 6329 1.064825 ATCCTCCGTTTCCAACACCT 58.935 50.000 0.00 0.00 0.00 4.00
5853 6330 1.165270 CATCCTCCGTTTCCAACACC 58.835 55.000 0.00 0.00 0.00 4.16
5854 6331 1.535462 CACATCCTCCGTTTCCAACAC 59.465 52.381 0.00 0.00 0.00 3.32
5855 6332 1.142060 ACACATCCTCCGTTTCCAACA 59.858 47.619 0.00 0.00 0.00 3.33
5856 6333 1.892209 ACACATCCTCCGTTTCCAAC 58.108 50.000 0.00 0.00 0.00 3.77
5857 6334 3.404899 GTTACACATCCTCCGTTTCCAA 58.595 45.455 0.00 0.00 0.00 3.53
5858 6335 2.289819 GGTTACACATCCTCCGTTTCCA 60.290 50.000 0.00 0.00 0.00 3.53
5859 6336 2.027469 AGGTTACACATCCTCCGTTTCC 60.027 50.000 0.00 0.00 0.00 3.13
5860 6337 3.329929 AGGTTACACATCCTCCGTTTC 57.670 47.619 0.00 0.00 0.00 2.78
5861 6338 4.715297 AGATAGGTTACACATCCTCCGTTT 59.285 41.667 0.00 0.00 35.51 3.60
5862 6339 4.287552 AGATAGGTTACACATCCTCCGTT 58.712 43.478 0.00 0.00 35.51 4.44
5863 6340 3.890147 GAGATAGGTTACACATCCTCCGT 59.110 47.826 0.00 0.00 35.51 4.69
5864 6341 3.889538 TGAGATAGGTTACACATCCTCCG 59.110 47.826 0.00 0.00 35.51 4.63
5865 6342 5.364157 ACTTGAGATAGGTTACACATCCTCC 59.636 44.000 0.00 0.00 35.51 4.30
5866 6343 6.472686 ACTTGAGATAGGTTACACATCCTC 57.527 41.667 0.00 0.00 35.51 3.71
5867 6344 6.352222 CCAACTTGAGATAGGTTACACATCCT 60.352 42.308 0.00 0.00 37.80 3.24
5868 6345 5.817816 CCAACTTGAGATAGGTTACACATCC 59.182 44.000 0.00 0.00 0.00 3.51
5869 6346 6.407202 ACCAACTTGAGATAGGTTACACATC 58.593 40.000 0.00 0.00 0.00 3.06
5870 6347 6.374417 ACCAACTTGAGATAGGTTACACAT 57.626 37.500 0.00 0.00 0.00 3.21
5871 6348 5.566032 CGACCAACTTGAGATAGGTTACACA 60.566 44.000 0.00 0.00 31.57 3.72
5872 6349 4.863131 CGACCAACTTGAGATAGGTTACAC 59.137 45.833 0.00 0.00 31.57 2.90
5873 6350 4.525487 ACGACCAACTTGAGATAGGTTACA 59.475 41.667 0.00 0.00 31.57 2.41
5874 6351 5.069501 ACGACCAACTTGAGATAGGTTAC 57.930 43.478 0.00 0.00 31.57 2.50
5875 6352 5.733620 AACGACCAACTTGAGATAGGTTA 57.266 39.130 0.00 0.00 31.57 2.85
5876 6353 4.618920 AACGACCAACTTGAGATAGGTT 57.381 40.909 0.00 0.00 31.57 3.50
5877 6354 4.566987 GAAACGACCAACTTGAGATAGGT 58.433 43.478 0.00 0.00 34.76 3.08
5878 6355 3.612860 CGAAACGACCAACTTGAGATAGG 59.387 47.826 0.00 0.00 0.00 2.57
5879 6356 3.060895 GCGAAACGACCAACTTGAGATAG 59.939 47.826 0.00 0.00 0.00 2.08
5880 6357 2.991190 GCGAAACGACCAACTTGAGATA 59.009 45.455 0.00 0.00 0.00 1.98
5881 6358 1.798813 GCGAAACGACCAACTTGAGAT 59.201 47.619 0.00 0.00 0.00 2.75
5882 6359 1.202486 AGCGAAACGACCAACTTGAGA 60.202 47.619 0.00 0.00 0.00 3.27
5883 6360 1.217882 AGCGAAACGACCAACTTGAG 58.782 50.000 0.00 0.00 0.00 3.02
5957 6434 2.481441 TGGTCATGGCTCCTTCTACAT 58.519 47.619 0.00 0.00 0.00 2.29
5958 6435 1.951209 TGGTCATGGCTCCTTCTACA 58.049 50.000 0.00 0.00 0.00 2.74
5965 6442 1.549203 AAACACATGGTCATGGCTCC 58.451 50.000 14.49 0.00 42.91 4.70
5966 6443 2.353011 CCAAAACACATGGTCATGGCTC 60.353 50.000 14.49 0.00 42.91 4.70
5967 6444 1.619827 CCAAAACACATGGTCATGGCT 59.380 47.619 14.49 0.00 42.91 4.75
5968 6445 1.940752 GCCAAAACACATGGTCATGGC 60.941 52.381 18.54 18.54 46.96 4.40
5985 6462 2.700783 ATCACTCACTGATGGGCCA 58.299 52.632 9.61 9.61 38.28 5.36
6006 6483 2.991076 GCCGCGACTACCTGTCACT 61.991 63.158 8.23 0.00 45.60 3.41
6041 6533 1.876156 CAAGCACCCTTTCTGTCTGAC 59.124 52.381 0.00 0.00 0.00 3.51
6065 6557 3.510388 TCAGGCGACTACAGAAATCTG 57.490 47.619 8.84 8.84 44.66 2.90
6067 6559 5.220681 GGAAATTCAGGCGACTACAGAAATC 60.221 44.000 0.00 0.00 40.21 2.17
6068 6560 4.636206 GGAAATTCAGGCGACTACAGAAAT 59.364 41.667 0.00 0.00 40.21 2.17
6072 6564 1.927174 CGGAAATTCAGGCGACTACAG 59.073 52.381 0.00 0.00 40.21 2.74
6092 6825 1.917872 TGGCAACCAACCAATCCTAC 58.082 50.000 0.00 0.00 33.12 3.18
6095 6828 1.205417 CTGATGGCAACCAACCAATCC 59.795 52.381 0.00 0.00 41.49 3.01
6122 6864 1.069823 CGCATGCCCTACTTCTGAGAT 59.930 52.381 13.15 0.00 0.00 2.75
6138 6880 2.124151 GACCTGGGCATTCCGCAT 60.124 61.111 0.00 0.00 45.17 4.73
6142 6884 2.597903 GAGGGACCTGGGCATTCC 59.402 66.667 0.00 0.00 0.00 3.01
6153 6895 3.391382 CACCACGGAGGGAGGGAC 61.391 72.222 1.11 0.00 43.89 4.46
6154 6896 4.715130 CCACCACGGAGGGAGGGA 62.715 72.222 1.11 0.00 43.89 4.20
6202 6950 3.604772 CGCTAAGCCATTAAGACGCATTC 60.605 47.826 0.00 0.00 0.00 2.67
6263 7011 4.740822 ATTCCCCCGGCACAGCAC 62.741 66.667 0.00 0.00 0.00 4.40
6264 7012 4.424711 GATTCCCCCGGCACAGCA 62.425 66.667 0.00 0.00 0.00 4.41
6265 7013 3.721370 ATGATTCCCCCGGCACAGC 62.721 63.158 0.00 0.00 0.00 4.40
6266 7014 0.684153 AAATGATTCCCCCGGCACAG 60.684 55.000 0.00 0.00 0.00 3.66
6267 7015 0.252012 AAAATGATTCCCCCGGCACA 60.252 50.000 0.00 0.00 0.00 4.57
6291 7039 2.238144 TCCTCCTCAAGCCTGAATGAAG 59.762 50.000 0.00 0.00 0.00 3.02
6292 7040 2.238144 CTCCTCCTCAAGCCTGAATGAA 59.762 50.000 0.00 0.00 0.00 2.57
6293 7041 1.836166 CTCCTCCTCAAGCCTGAATGA 59.164 52.381 0.00 0.00 0.00 2.57
6294 7042 1.558756 ACTCCTCCTCAAGCCTGAATG 59.441 52.381 0.00 0.00 0.00 2.67
6295 7043 1.963985 ACTCCTCCTCAAGCCTGAAT 58.036 50.000 0.00 0.00 0.00 2.57
6296 7044 1.349026 CAACTCCTCCTCAAGCCTGAA 59.651 52.381 0.00 0.00 0.00 3.02
6297 7045 0.979665 CAACTCCTCCTCAAGCCTGA 59.020 55.000 0.00 0.00 0.00 3.86
6298 7046 0.035630 CCAACTCCTCCTCAAGCCTG 60.036 60.000 0.00 0.00 0.00 4.85
6299 7047 1.846712 GCCAACTCCTCCTCAAGCCT 61.847 60.000 0.00 0.00 0.00 4.58
6300 7048 1.377856 GCCAACTCCTCCTCAAGCC 60.378 63.158 0.00 0.00 0.00 4.35
6302 7050 0.979665 TCTGCCAACTCCTCCTCAAG 59.020 55.000 0.00 0.00 0.00 3.02
6303 7051 0.979665 CTCTGCCAACTCCTCCTCAA 59.020 55.000 0.00 0.00 0.00 3.02
6304 7052 0.906756 CCTCTGCCAACTCCTCCTCA 60.907 60.000 0.00 0.00 0.00 3.86
6306 7054 0.474660 AACCTCTGCCAACTCCTCCT 60.475 55.000 0.00 0.00 0.00 3.69
6307 7055 0.322008 CAACCTCTGCCAACTCCTCC 60.322 60.000 0.00 0.00 0.00 4.30
6308 7056 0.322008 CCAACCTCTGCCAACTCCTC 60.322 60.000 0.00 0.00 0.00 3.71
6309 7057 1.763770 CCAACCTCTGCCAACTCCT 59.236 57.895 0.00 0.00 0.00 3.69
6310 7058 1.973812 GCCAACCTCTGCCAACTCC 60.974 63.158 0.00 0.00 0.00 3.85
6311 7059 2.328099 CGCCAACCTCTGCCAACTC 61.328 63.158 0.00 0.00 0.00 3.01
6312 7060 2.281761 CGCCAACCTCTGCCAACT 60.282 61.111 0.00 0.00 0.00 3.16
6313 7061 3.365265 CCGCCAACCTCTGCCAAC 61.365 66.667 0.00 0.00 0.00 3.77
6314 7062 3.842925 GACCGCCAACCTCTGCCAA 62.843 63.158 0.00 0.00 0.00 4.52
6315 7063 4.329545 GACCGCCAACCTCTGCCA 62.330 66.667 0.00 0.00 0.00 4.92
6321 7069 2.943978 CGAGGAAGACCGCCAACCT 61.944 63.158 0.00 0.00 41.83 3.50
6332 7080 0.038159 AGAAGGTGTTCGCGAGGAAG 60.038 55.000 9.59 0.00 37.79 3.46
6334 7082 1.250328 TAAGAAGGTGTTCGCGAGGA 58.750 50.000 9.59 0.00 37.79 3.71
6335 7083 2.074547 TTAAGAAGGTGTTCGCGAGG 57.925 50.000 9.59 0.00 37.79 4.63
6336 7084 4.151689 TGAAATTAAGAAGGTGTTCGCGAG 59.848 41.667 9.59 0.00 37.79 5.03
6337 7085 4.059511 TGAAATTAAGAAGGTGTTCGCGA 58.940 39.130 3.71 3.71 37.79 5.87
6338 7086 4.394795 CTGAAATTAAGAAGGTGTTCGCG 58.605 43.478 0.00 0.00 37.79 5.87
6339 7087 4.215613 ACCTGAAATTAAGAAGGTGTTCGC 59.784 41.667 0.00 0.00 41.52 4.70
6342 7090 7.004086 TGATGACCTGAAATTAAGAAGGTGTT 58.996 34.615 0.00 0.00 43.12 3.32
6343 7091 6.542821 TGATGACCTGAAATTAAGAAGGTGT 58.457 36.000 0.00 0.00 43.12 4.16
6416 7198 3.392616 AGAACATGTGTCATATCCCTCCC 59.607 47.826 0.00 0.00 0.00 4.30
6467 7250 1.982073 GAGGAAAATGCAGCCCGTCG 61.982 60.000 0.00 0.00 0.00 5.12
6468 7251 0.678048 AGAGGAAAATGCAGCCCGTC 60.678 55.000 0.00 0.00 0.00 4.79
6469 7252 0.251341 AAGAGGAAAATGCAGCCCGT 60.251 50.000 0.00 0.00 0.00 5.28
6470 7253 0.453390 GAAGAGGAAAATGCAGCCCG 59.547 55.000 0.00 0.00 0.00 6.13
6471 7254 1.844687 AGAAGAGGAAAATGCAGCCC 58.155 50.000 0.00 0.00 0.00 5.19
6472 7255 3.087781 AGAAGAAGAGGAAAATGCAGCC 58.912 45.455 0.00 0.00 0.00 4.85
6473 7256 4.780275 AAGAAGAAGAGGAAAATGCAGC 57.220 40.909 0.00 0.00 0.00 5.25
6474 7257 6.979465 AGAAAAGAAGAAGAGGAAAATGCAG 58.021 36.000 0.00 0.00 0.00 4.41
6475 7258 6.966534 AGAAAAGAAGAAGAGGAAAATGCA 57.033 33.333 0.00 0.00 0.00 3.96
6476 7259 7.656412 AGAAGAAAAGAAGAAGAGGAAAATGC 58.344 34.615 0.00 0.00 0.00 3.56
6477 7260 9.676195 GAAGAAGAAAAGAAGAAGAGGAAAATG 57.324 33.333 0.00 0.00 0.00 2.32
6478 7261 9.413734 TGAAGAAGAAAAGAAGAAGAGGAAAAT 57.586 29.630 0.00 0.00 0.00 1.82
6479 7262 8.807948 TGAAGAAGAAAAGAAGAAGAGGAAAA 57.192 30.769 0.00 0.00 0.00 2.29
6480 7263 8.844244 CATGAAGAAGAAAAGAAGAAGAGGAAA 58.156 33.333 0.00 0.00 0.00 3.13
6481 7264 7.995488 ACATGAAGAAGAAAAGAAGAAGAGGAA 59.005 33.333 0.00 0.00 0.00 3.36
6482 7265 7.512992 ACATGAAGAAGAAAAGAAGAAGAGGA 58.487 34.615 0.00 0.00 0.00 3.71
6483 7266 7.742556 ACATGAAGAAGAAAAGAAGAAGAGG 57.257 36.000 0.00 0.00 0.00 3.69
6509 7292 9.321532 TGGTCCCTAAGTATATAGTACGTACTA 57.678 37.037 31.69 31.69 42.43 1.82
6510 7293 8.207350 TGGTCCCTAAGTATATAGTACGTACT 57.793 38.462 29.62 29.62 40.24 2.73
6511 7294 8.722394 GTTGGTCCCTAAGTATATAGTACGTAC 58.278 40.741 18.10 18.10 0.00 3.67
6512 7295 7.602644 CGTTGGTCCCTAAGTATATAGTACGTA 59.397 40.741 0.00 0.00 0.00 3.57
6513 7296 6.428159 CGTTGGTCCCTAAGTATATAGTACGT 59.572 42.308 0.00 0.00 0.00 3.57
6514 7297 6.128172 CCGTTGGTCCCTAAGTATATAGTACG 60.128 46.154 0.00 0.00 0.00 3.67
6515 7298 6.717084 ACCGTTGGTCCCTAAGTATATAGTAC 59.283 42.308 0.00 0.00 0.00 2.73
6516 7299 6.852404 ACCGTTGGTCCCTAAGTATATAGTA 58.148 40.000 0.00 0.00 0.00 1.82
6517 7300 5.709594 ACCGTTGGTCCCTAAGTATATAGT 58.290 41.667 0.00 0.00 0.00 2.12
6518 7301 6.661304 AACCGTTGGTCCCTAAGTATATAG 57.339 41.667 0.00 0.00 33.12 1.31
6519 7302 6.819284 CAAACCGTTGGTCCCTAAGTATATA 58.181 40.000 0.00 0.00 33.12 0.86
6520 7303 5.677567 CAAACCGTTGGTCCCTAAGTATAT 58.322 41.667 0.00 0.00 33.12 0.86
6548 7331 0.098025 ACGAAACACGCAACCTGTTG 59.902 50.000 5.66 5.66 46.94 3.33
6549 7332 0.098025 CACGAAACACGCAACCTGTT 59.902 50.000 0.00 0.00 46.94 3.16
6550 7333 1.711060 CCACGAAACACGCAACCTGT 61.711 55.000 0.00 0.00 46.94 4.00
6551 7334 1.010125 CCACGAAACACGCAACCTG 60.010 57.895 0.00 0.00 46.94 4.00
6552 7335 2.830285 GCCACGAAACACGCAACCT 61.830 57.895 0.00 0.00 46.94 3.50
6553 7336 2.353030 GCCACGAAACACGCAACC 60.353 61.111 0.00 0.00 46.94 3.77
6554 7337 0.236187 TATGCCACGAAACACGCAAC 59.764 50.000 0.00 0.00 46.94 4.17
6555 7338 0.515127 CTATGCCACGAAACACGCAA 59.485 50.000 0.00 0.00 46.94 4.85
6556 7339 1.906994 GCTATGCCACGAAACACGCA 61.907 55.000 0.00 0.00 46.94 5.24
6557 7340 1.226018 GCTATGCCACGAAACACGC 60.226 57.895 0.00 0.00 46.94 5.34
6559 7342 0.871722 TGTGCTATGCCACGAAACAC 59.128 50.000 0.00 0.00 38.55 3.32
6560 7343 0.871722 GTGTGCTATGCCACGAAACA 59.128 50.000 0.00 0.00 38.55 2.83
6561 7344 0.871722 TGTGTGCTATGCCACGAAAC 59.128 50.000 0.00 0.00 38.55 2.78
6562 7345 1.535028 CTTGTGTGCTATGCCACGAAA 59.465 47.619 0.00 0.00 38.55 3.46
6563 7346 1.155889 CTTGTGTGCTATGCCACGAA 58.844 50.000 0.00 0.00 38.55 3.85
6564 7347 1.298157 GCTTGTGTGCTATGCCACGA 61.298 55.000 0.00 0.00 38.55 4.35
6565 7348 1.135315 GCTTGTGTGCTATGCCACG 59.865 57.895 0.00 0.00 38.55 4.94
6566 7349 1.135315 CGCTTGTGTGCTATGCCAC 59.865 57.895 0.00 0.00 36.28 5.01
6567 7350 0.392863 ATCGCTTGTGTGCTATGCCA 60.393 50.000 0.00 0.00 0.00 4.92
6568 7351 1.261619 GTATCGCTTGTGTGCTATGCC 59.738 52.381 0.00 0.00 0.00 4.40
6569 7352 1.933181 TGTATCGCTTGTGTGCTATGC 59.067 47.619 0.00 0.00 0.00 3.14
6570 7353 2.034591 CGTGTATCGCTTGTGTGCTATG 60.035 50.000 0.00 0.00 0.00 2.23
6571 7354 2.159296 TCGTGTATCGCTTGTGTGCTAT 60.159 45.455 0.00 0.00 39.67 2.97
6572 7355 1.200484 TCGTGTATCGCTTGTGTGCTA 59.800 47.619 0.00 0.00 39.67 3.49
6573 7356 0.038618 TCGTGTATCGCTTGTGTGCT 60.039 50.000 0.00 0.00 39.67 4.40
6574 7357 0.999406 ATCGTGTATCGCTTGTGTGC 59.001 50.000 0.00 0.00 39.67 4.57
6575 7358 1.992667 ACATCGTGTATCGCTTGTGTG 59.007 47.619 0.00 0.00 39.67 3.82
6576 7359 2.363788 ACATCGTGTATCGCTTGTGT 57.636 45.000 0.00 0.00 39.67 3.72
6577 7360 2.222796 CCAACATCGTGTATCGCTTGTG 60.223 50.000 0.00 0.00 39.67 3.33
6578 7361 1.999735 CCAACATCGTGTATCGCTTGT 59.000 47.619 0.00 0.00 39.67 3.16
6579 7362 2.267426 TCCAACATCGTGTATCGCTTG 58.733 47.619 0.00 0.00 39.67 4.01
6580 7363 2.665649 TCCAACATCGTGTATCGCTT 57.334 45.000 0.00 0.00 39.67 4.68
6581 7364 2.890808 ATCCAACATCGTGTATCGCT 57.109 45.000 0.00 0.00 39.67 4.93
6582 7365 4.148348 GTCTTATCCAACATCGTGTATCGC 59.852 45.833 0.00 0.00 39.67 4.58
6583 7366 5.520632 AGTCTTATCCAACATCGTGTATCG 58.479 41.667 0.00 0.00 41.41 2.92
6584 7367 6.421202 GGAAGTCTTATCCAACATCGTGTATC 59.579 42.308 0.00 0.00 36.92 2.24
6585 7368 6.098409 AGGAAGTCTTATCCAACATCGTGTAT 59.902 38.462 0.00 0.00 39.55 2.29
6586 7369 5.421056 AGGAAGTCTTATCCAACATCGTGTA 59.579 40.000 0.00 0.00 39.55 2.90
6587 7370 4.223032 AGGAAGTCTTATCCAACATCGTGT 59.777 41.667 0.00 0.00 39.55 4.49
6588 7371 4.759782 AGGAAGTCTTATCCAACATCGTG 58.240 43.478 0.00 0.00 39.55 4.35
6589 7372 4.712337 AGAGGAAGTCTTATCCAACATCGT 59.288 41.667 0.00 0.00 39.55 3.73
6590 7373 5.269505 AGAGGAAGTCTTATCCAACATCG 57.730 43.478 0.00 0.00 39.55 3.84
6591 7374 7.391833 ACAAAAGAGGAAGTCTTATCCAACATC 59.608 37.037 0.00 0.00 45.44 3.06
6592 7375 7.175641 CACAAAAGAGGAAGTCTTATCCAACAT 59.824 37.037 0.00 0.00 45.44 2.71
6593 7376 6.486657 CACAAAAGAGGAAGTCTTATCCAACA 59.513 38.462 0.00 0.00 45.44 3.33
6594 7377 6.710744 TCACAAAAGAGGAAGTCTTATCCAAC 59.289 38.462 0.00 0.00 45.44 3.77
6595 7378 6.710744 GTCACAAAAGAGGAAGTCTTATCCAA 59.289 38.462 0.00 0.00 45.44 3.53
6596 7379 6.043243 AGTCACAAAAGAGGAAGTCTTATCCA 59.957 38.462 0.00 0.00 45.44 3.41
6597 7380 6.370166 CAGTCACAAAAGAGGAAGTCTTATCC 59.630 42.308 0.00 0.00 45.44 2.59
6598 7381 6.931840 ACAGTCACAAAAGAGGAAGTCTTATC 59.068 38.462 0.00 0.00 45.44 1.75
6599 7382 6.708054 CACAGTCACAAAAGAGGAAGTCTTAT 59.292 38.462 0.00 0.00 45.44 1.73
6642 7425 1.080772 TCGACGGCAGACATGTCAC 60.081 57.895 27.02 17.92 32.91 3.67
6666 7449 3.513662 CACACATGCATGTTTGGTATGG 58.486 45.455 30.02 19.26 39.39 2.74
6680 7463 2.751259 ACAGGATTAGCAAGCACACATG 59.249 45.455 0.00 0.00 0.00 3.21
6681 7464 3.077484 ACAGGATTAGCAAGCACACAT 57.923 42.857 0.00 0.00 0.00 3.21
6682 7465 2.566833 ACAGGATTAGCAAGCACACA 57.433 45.000 0.00 0.00 0.00 3.72
6683 7466 3.366374 GGAAACAGGATTAGCAAGCACAC 60.366 47.826 0.00 0.00 0.00 3.82
6687 7470 3.084786 ACAGGAAACAGGATTAGCAAGC 58.915 45.455 0.00 0.00 0.00 4.01
6688 7471 4.074970 ACACAGGAAACAGGATTAGCAAG 58.925 43.478 0.00 0.00 0.00 4.01
6689 7472 3.820467 CACACAGGAAACAGGATTAGCAA 59.180 43.478 0.00 0.00 0.00 3.91
6690 7473 3.181445 ACACACAGGAAACAGGATTAGCA 60.181 43.478 0.00 0.00 0.00 3.49
6691 7474 3.189287 CACACACAGGAAACAGGATTAGC 59.811 47.826 0.00 0.00 0.00 3.09
6692 7475 3.189287 GCACACACAGGAAACAGGATTAG 59.811 47.826 0.00 0.00 0.00 1.73
6740 7523 4.077188 GAAGAGCCACGCACGCAC 62.077 66.667 0.00 0.00 0.00 5.34
6741 7524 3.807631 AAGAAGAGCCACGCACGCA 62.808 57.895 0.00 0.00 0.00 5.24
6797 7580 2.491298 TGTGACGCATAAAACATGGCAT 59.509 40.909 0.00 0.00 0.00 4.40
6812 7595 4.853507 CAGCCTTTGCATGTGACG 57.146 55.556 0.00 0.00 41.13 4.35
6821 7604 0.674895 AAGCTAGACGGCAGCCTTTG 60.675 55.000 10.54 0.00 39.99 2.77
6826 7609 2.036089 AGGTTATAAGCTAGACGGCAGC 59.964 50.000 15.41 4.72 39.41 5.25
6828 7611 3.702548 TCAAGGTTATAAGCTAGACGGCA 59.297 43.478 17.14 0.00 35.34 5.69
6832 7615 8.035984 AGTCAAAGTCAAGGTTATAAGCTAGAC 58.964 37.037 17.14 14.47 35.34 2.59
6839 7622 8.934023 AATGGAAGTCAAAGTCAAGGTTATAA 57.066 30.769 0.00 0.00 0.00 0.98
6847 7630 5.181245 GGATCGAAATGGAAGTCAAAGTCAA 59.819 40.000 0.00 0.00 0.00 3.18
6882 7665 3.681417 GGTTGGTATCACGTGGTACTTTC 59.319 47.826 31.91 22.17 0.00 2.62
6924 7709 9.562408 TTTGGGGGACATTTAAATTTTAACTTC 57.438 29.630 0.00 0.00 0.00 3.01
6946 7731 7.018826 CACAAAGCAAATATCAGCATTTTTGG 58.981 34.615 12.75 4.08 33.69 3.28
6947 7732 7.798801 TCACAAAGCAAATATCAGCATTTTTG 58.201 30.769 2.66 6.57 35.28 2.44
7011 7796 9.166173 CTCAATGTGTATCTTGAGTTTGGATTA 57.834 33.333 4.53 0.00 42.12 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.