Multiple sequence alignment - TraesCS6A01G210600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G210600 chr6A 100.000 3595 0 0 887 4481 382523917 382520323 0.000000e+00 6639.0
1 TraesCS6A01G210600 chr6A 100.000 496 0 0 1 496 382524803 382524308 0.000000e+00 917.0
2 TraesCS6A01G210600 chr6A 94.801 327 17 0 1 327 382529415 382529089 1.110000e-140 510.0
3 TraesCS6A01G210600 chr6A 92.771 166 10 2 4318 4481 581446288 581446123 5.790000e-59 239.0
4 TraesCS6A01G210600 chr6A 94.595 37 1 1 4089 4125 382520544 382520509 6.260000e-04 56.5
5 TraesCS6A01G210600 chr6A 94.595 37 1 1 4260 4295 382520715 382520679 6.260000e-04 56.5
6 TraesCS6A01G210600 chr6B 95.619 2237 90 4 1499 3729 416676330 416674096 0.000000e+00 3581.0
7 TraesCS6A01G210600 chr6B 95.469 618 19 4 888 1497 416677037 416676421 0.000000e+00 977.0
8 TraesCS6A01G210600 chr6B 92.979 527 25 8 3801 4323 416674073 416673555 0.000000e+00 758.0
9 TraesCS6A01G210600 chr6B 97.297 37 0 1 4089 4125 416673618 416673583 1.350000e-05 62.1
10 TraesCS6A01G210600 chr6D 95.518 1874 68 7 887 2754 268069059 268067196 0.000000e+00 2981.0
11 TraesCS6A01G210600 chr6D 94.388 980 48 4 2752 3729 268067115 268066141 0.000000e+00 1498.0
12 TraesCS6A01G210600 chr6D 92.789 527 26 8 3801 4323 268066118 268065600 0.000000e+00 752.0
13 TraesCS6A01G210600 chr6D 93.750 160 10 0 4322 4481 62137827 62137668 1.610000e-59 241.0
14 TraesCS6A01G210600 chr6D 91.912 136 9 1 363 496 268069191 268069056 5.920000e-44 189.0
15 TraesCS6A01G210600 chr6D 97.297 37 0 1 4089 4125 268065663 268065628 1.350000e-05 62.1
16 TraesCS6A01G210600 chr1A 94.190 327 17 1 1 327 120370323 120370647 8.660000e-137 497.0
17 TraesCS6A01G210600 chr1A 93.231 325 19 2 3 327 120374974 120375295 4.060000e-130 475.0
18 TraesCS6A01G210600 chr5A 93.884 327 20 0 1 327 603789114 603788788 1.120000e-135 494.0
19 TraesCS6A01G210600 chr3A 93.617 329 21 0 1 329 722446988 722447316 4.030000e-135 492.0
20 TraesCS6A01G210600 chr3A 93.578 327 21 0 1 327 722442253 722442579 5.210000e-134 488.0
21 TraesCS6A01G210600 chr3A 94.410 161 8 1 4322 4481 26400374 26400214 3.460000e-61 246.0
22 TraesCS6A01G210600 chr5D 93.272 327 21 1 1 327 549437101 549437426 8.720000e-132 481.0
23 TraesCS6A01G210600 chr5D 94.444 162 7 2 4321 4481 254593516 254593676 9.630000e-62 248.0
24 TraesCS6A01G210600 chr4A 92.966 327 23 0 1 327 693629475 693629149 1.130000e-130 477.0
25 TraesCS6A01G210600 chr7A 92.683 328 22 2 1 327 107023886 107023560 5.250000e-129 472.0
26 TraesCS6A01G210600 chr4B 94.969 159 8 0 4323 4481 377799834 377799676 2.680000e-62 250.0
27 TraesCS6A01G210600 chr3B 90.374 187 15 3 4298 4481 100829767 100829953 4.480000e-60 243.0
28 TraesCS6A01G210600 chr3B 93.252 163 11 0 4319 4481 708507433 708507595 1.610000e-59 241.0
29 TraesCS6A01G210600 chr1D 93.210 162 7 3 4322 4481 383362391 383362232 7.490000e-58 235.0
30 TraesCS6A01G210600 chr2A 90.857 175 12 4 4310 4481 719094624 719094451 9.690000e-57 231.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G210600 chr6A 382520323 382524803 4480 True 1917.250 6639 97.2975 1 4481 4 chr6A.!!$R3 4480
1 TraesCS6A01G210600 chr6B 416673555 416677037 3482 True 1344.525 3581 95.3410 888 4323 4 chr6B.!!$R1 3435
2 TraesCS6A01G210600 chr6D 268065600 268069191 3591 True 1096.420 2981 94.3808 363 4323 5 chr6D.!!$R2 3960

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
493 496 0.843984 CCGGACCCTACCCATGAAAT 59.156 55.0 0.00 0.00 0.0 2.17 F
1247 1258 0.917333 ATTTTGCCCCCGGGACTAGA 60.917 55.0 26.32 6.33 37.5 2.43 F
1623 1724 0.036164 TGGTGTGCTGCCGTTATCTT 59.964 50.0 0.00 0.00 0.0 2.40 F
1660 1761 1.369625 GGTATGGGAGTCGTTTGCTG 58.630 55.0 0.00 0.00 0.0 4.41 F
3206 3397 0.250467 TTGCACTTGAGTCTCTGCCC 60.250 55.0 9.40 0.00 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1623 1724 0.523519 CCGCTAGCGCTGATAGATCA 59.476 55.000 31.35 0.00 38.24 2.92 R
2915 3105 0.887933 AAAGGTTACAGGCATTGGCG 59.112 50.000 4.38 2.83 42.47 5.69 R
3206 3397 1.135083 ACTTCAGTAACGGGAGCATCG 60.135 52.381 0.00 0.00 34.37 3.84 R
3443 3634 4.153835 GCTCTTCCAAGACTGTCAATTCAG 59.846 45.833 10.88 0.71 40.80 3.02 R
4346 4541 0.036294 GCAGACTCCCTAACACCCAC 60.036 60.000 0.00 0.00 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.217035 TGAGCAACGCGCCATAAT 57.783 50.000 5.73 0.00 44.04 1.28
18 19 3.371087 TGAGCAACGCGCCATAATA 57.629 47.368 5.73 0.00 44.04 0.98
19 20 1.217001 TGAGCAACGCGCCATAATAG 58.783 50.000 5.73 0.00 44.04 1.73
20 21 1.202475 TGAGCAACGCGCCATAATAGA 60.202 47.619 5.73 0.00 44.04 1.98
21 22 1.457303 GAGCAACGCGCCATAATAGAG 59.543 52.381 5.73 0.00 44.04 2.43
22 23 1.202533 AGCAACGCGCCATAATAGAGT 60.203 47.619 5.73 0.00 44.04 3.24
23 24 1.070577 GCAACGCGCCATAATAGAGTG 60.071 52.381 5.73 0.00 32.94 3.51
24 25 2.201732 CAACGCGCCATAATAGAGTGT 58.798 47.619 5.73 0.00 0.00 3.55
25 26 3.377439 CAACGCGCCATAATAGAGTGTA 58.623 45.455 5.73 0.00 0.00 2.90
26 27 3.720949 ACGCGCCATAATAGAGTGTAA 57.279 42.857 5.73 0.00 0.00 2.41
27 28 4.049546 ACGCGCCATAATAGAGTGTAAA 57.950 40.909 5.73 0.00 0.00 2.01
28 29 4.628074 ACGCGCCATAATAGAGTGTAAAT 58.372 39.130 5.73 0.00 0.00 1.40
29 30 5.054477 ACGCGCCATAATAGAGTGTAAATT 58.946 37.500 5.73 0.00 0.00 1.82
30 31 5.176958 ACGCGCCATAATAGAGTGTAAATTC 59.823 40.000 5.73 0.00 0.00 2.17
31 32 5.389516 CGCGCCATAATAGAGTGTAAATTCC 60.390 44.000 0.00 0.00 0.00 3.01
32 33 5.701290 GCGCCATAATAGAGTGTAAATTCCT 59.299 40.000 0.00 0.00 0.00 3.36
33 34 6.128526 GCGCCATAATAGAGTGTAAATTCCTC 60.129 42.308 0.00 0.00 0.00 3.71
34 35 7.155328 CGCCATAATAGAGTGTAAATTCCTCT 58.845 38.462 0.00 0.00 38.94 3.69
35 36 8.304596 CGCCATAATAGAGTGTAAATTCCTCTA 58.695 37.037 0.00 0.00 40.89 2.43
36 37 9.998106 GCCATAATAGAGTGTAAATTCCTCTAA 57.002 33.333 0.00 0.00 40.24 2.10
66 67 6.506538 AGATCAACATTAGGGCTGTAATCT 57.493 37.500 0.00 0.00 0.00 2.40
67 68 7.618019 AGATCAACATTAGGGCTGTAATCTA 57.382 36.000 0.00 0.00 0.00 1.98
68 69 8.034313 AGATCAACATTAGGGCTGTAATCTAA 57.966 34.615 0.00 0.00 0.00 2.10
69 70 7.934120 AGATCAACATTAGGGCTGTAATCTAAC 59.066 37.037 0.00 0.00 0.00 2.34
70 71 7.195374 TCAACATTAGGGCTGTAATCTAACT 57.805 36.000 0.00 0.00 0.00 2.24
71 72 8.313944 TCAACATTAGGGCTGTAATCTAACTA 57.686 34.615 0.00 0.00 0.00 2.24
72 73 8.934697 TCAACATTAGGGCTGTAATCTAACTAT 58.065 33.333 0.00 0.00 0.00 2.12
75 76 8.521176 ACATTAGGGCTGTAATCTAACTATACG 58.479 37.037 0.00 0.00 0.00 3.06
76 77 8.737175 CATTAGGGCTGTAATCTAACTATACGA 58.263 37.037 0.00 0.00 0.00 3.43
77 78 8.874744 TTAGGGCTGTAATCTAACTATACGAT 57.125 34.615 0.00 0.00 0.00 3.73
78 79 7.393841 AGGGCTGTAATCTAACTATACGATC 57.606 40.000 0.00 0.00 0.00 3.69
79 80 7.176490 AGGGCTGTAATCTAACTATACGATCT 58.824 38.462 0.00 0.00 0.00 2.75
80 81 8.327271 AGGGCTGTAATCTAACTATACGATCTA 58.673 37.037 0.00 0.00 0.00 1.98
81 82 8.614346 GGGCTGTAATCTAACTATACGATCTAG 58.386 40.741 0.00 0.00 0.00 2.43
82 83 8.124199 GGCTGTAATCTAACTATACGATCTAGC 58.876 40.741 0.00 0.00 0.00 3.42
83 84 8.885722 GCTGTAATCTAACTATACGATCTAGCT 58.114 37.037 0.00 0.00 0.00 3.32
85 86 9.381033 TGTAATCTAACTATACGATCTAGCTCC 57.619 37.037 0.00 0.00 0.00 4.70
86 87 9.603921 GTAATCTAACTATACGATCTAGCTCCT 57.396 37.037 0.00 0.00 0.00 3.69
88 89 9.523168 AATCTAACTATACGATCTAGCTCCTTT 57.477 33.333 0.00 0.00 0.00 3.11
89 90 8.550710 TCTAACTATACGATCTAGCTCCTTTC 57.449 38.462 0.00 0.00 0.00 2.62
90 91 8.155510 TCTAACTATACGATCTAGCTCCTTTCA 58.844 37.037 0.00 0.00 0.00 2.69
91 92 7.584122 AACTATACGATCTAGCTCCTTTCAA 57.416 36.000 0.00 0.00 0.00 2.69
92 93 7.768807 ACTATACGATCTAGCTCCTTTCAAT 57.231 36.000 0.00 0.00 0.00 2.57
93 94 8.184304 ACTATACGATCTAGCTCCTTTCAATT 57.816 34.615 0.00 0.00 0.00 2.32
94 95 9.298250 ACTATACGATCTAGCTCCTTTCAATTA 57.702 33.333 0.00 0.00 0.00 1.40
97 98 7.055667 ACGATCTAGCTCCTTTCAATTATCA 57.944 36.000 0.00 0.00 0.00 2.15
98 99 7.151308 ACGATCTAGCTCCTTTCAATTATCAG 58.849 38.462 0.00 0.00 0.00 2.90
99 100 7.151308 CGATCTAGCTCCTTTCAATTATCAGT 58.849 38.462 0.00 0.00 0.00 3.41
100 101 7.116090 CGATCTAGCTCCTTTCAATTATCAGTG 59.884 40.741 0.00 0.00 0.00 3.66
101 102 7.187824 TCTAGCTCCTTTCAATTATCAGTGT 57.812 36.000 0.00 0.00 0.00 3.55
102 103 8.306313 TCTAGCTCCTTTCAATTATCAGTGTA 57.694 34.615 0.00 0.00 0.00 2.90
103 104 8.198109 TCTAGCTCCTTTCAATTATCAGTGTAC 58.802 37.037 0.00 0.00 0.00 2.90
104 105 6.116126 AGCTCCTTTCAATTATCAGTGTACC 58.884 40.000 0.00 0.00 0.00 3.34
105 106 5.297029 GCTCCTTTCAATTATCAGTGTACCC 59.703 44.000 0.00 0.00 0.00 3.69
106 107 5.424757 TCCTTTCAATTATCAGTGTACCCG 58.575 41.667 0.00 0.00 0.00 5.28
107 108 4.574828 CCTTTCAATTATCAGTGTACCCGG 59.425 45.833 0.00 0.00 0.00 5.73
108 109 3.830744 TCAATTATCAGTGTACCCGGG 57.169 47.619 22.25 22.25 0.00 5.73
109 110 3.109151 TCAATTATCAGTGTACCCGGGT 58.891 45.455 32.66 32.66 0.00 5.28
110 111 4.288398 TCAATTATCAGTGTACCCGGGTA 58.712 43.478 30.02 30.02 0.00 3.69
111 112 4.715792 TCAATTATCAGTGTACCCGGGTAA 59.284 41.667 34.80 19.58 31.86 2.85
112 113 5.367352 TCAATTATCAGTGTACCCGGGTAAT 59.633 40.000 34.80 24.76 31.86 1.89
113 114 4.942761 TTATCAGTGTACCCGGGTAATC 57.057 45.455 34.80 27.11 31.86 1.75
114 115 2.537633 TCAGTGTACCCGGGTAATCT 57.462 50.000 34.80 28.71 31.86 2.40
115 116 2.823959 TCAGTGTACCCGGGTAATCTT 58.176 47.619 34.80 17.45 31.86 2.40
116 117 3.175594 TCAGTGTACCCGGGTAATCTTT 58.824 45.455 34.80 15.68 31.86 2.52
117 118 3.196254 TCAGTGTACCCGGGTAATCTTTC 59.804 47.826 34.80 20.97 31.86 2.62
118 119 2.502947 AGTGTACCCGGGTAATCTTTCC 59.497 50.000 34.80 20.24 31.86 3.13
119 120 2.236893 GTGTACCCGGGTAATCTTTCCA 59.763 50.000 34.80 22.60 31.86 3.53
120 121 2.911636 TGTACCCGGGTAATCTTTCCAA 59.088 45.455 34.80 8.29 31.86 3.53
121 122 3.524380 TGTACCCGGGTAATCTTTCCAAT 59.476 43.478 34.80 5.70 31.86 3.16
122 123 4.720773 TGTACCCGGGTAATCTTTCCAATA 59.279 41.667 34.80 7.44 31.86 1.90
123 124 5.370289 TGTACCCGGGTAATCTTTCCAATAT 59.630 40.000 34.80 4.45 31.86 1.28
124 125 6.558014 TGTACCCGGGTAATCTTTCCAATATA 59.442 38.462 34.80 6.16 31.86 0.86
125 126 6.518516 ACCCGGGTAATCTTTCCAATATAA 57.481 37.500 29.13 0.00 0.00 0.98
126 127 6.301486 ACCCGGGTAATCTTTCCAATATAAC 58.699 40.000 29.13 0.00 0.00 1.89
127 128 6.102174 ACCCGGGTAATCTTTCCAATATAACT 59.898 38.462 29.13 0.00 0.00 2.24
128 129 7.293062 ACCCGGGTAATCTTTCCAATATAACTA 59.707 37.037 29.13 0.00 0.00 2.24
129 130 7.605309 CCCGGGTAATCTTTCCAATATAACTAC 59.395 40.741 14.18 0.00 0.00 2.73
130 131 8.373220 CCGGGTAATCTTTCCAATATAACTACT 58.627 37.037 0.00 0.00 0.00 2.57
154 155 8.963725 ACTATATTGTATTCCACCGATAATCGA 58.036 33.333 0.00 0.00 43.74 3.59
155 156 9.797556 CTATATTGTATTCCACCGATAATCGAA 57.202 33.333 0.00 0.00 43.74 3.71
157 158 6.779115 TTGTATTCCACCGATAATCGAATG 57.221 37.500 0.00 0.00 43.74 2.67
158 159 5.234752 TGTATTCCACCGATAATCGAATGG 58.765 41.667 0.00 0.00 43.74 3.16
159 160 2.163818 TCCACCGATAATCGAATGGC 57.836 50.000 0.00 0.00 43.74 4.40
160 161 1.691976 TCCACCGATAATCGAATGGCT 59.308 47.619 0.00 0.00 43.74 4.75
161 162 2.104111 TCCACCGATAATCGAATGGCTT 59.896 45.455 0.00 0.00 43.74 4.35
162 163 2.480419 CCACCGATAATCGAATGGCTTC 59.520 50.000 0.00 0.00 43.74 3.86
163 164 2.480419 CACCGATAATCGAATGGCTTCC 59.520 50.000 0.00 0.00 43.74 3.46
164 165 2.368875 ACCGATAATCGAATGGCTTCCT 59.631 45.455 0.00 0.00 43.74 3.36
165 166 3.181454 ACCGATAATCGAATGGCTTCCTT 60.181 43.478 0.00 0.00 43.74 3.36
166 167 4.039973 ACCGATAATCGAATGGCTTCCTTA 59.960 41.667 0.00 0.00 43.74 2.69
167 168 4.994852 CCGATAATCGAATGGCTTCCTTAA 59.005 41.667 0.00 0.00 43.74 1.85
168 169 5.120830 CCGATAATCGAATGGCTTCCTTAAG 59.879 44.000 0.00 0.00 43.74 1.85
202 203 8.671384 ACTTAAGTACATTTCAGCAAGTAACA 57.329 30.769 6.26 0.00 0.00 2.41
203 204 9.116067 ACTTAAGTACATTTCAGCAAGTAACAA 57.884 29.630 6.26 0.00 0.00 2.83
207 208 7.593825 AGTACATTTCAGCAAGTAACAATTCC 58.406 34.615 0.00 0.00 0.00 3.01
208 209 6.403866 ACATTTCAGCAAGTAACAATTCCA 57.596 33.333 0.00 0.00 0.00 3.53
209 210 6.996509 ACATTTCAGCAAGTAACAATTCCAT 58.003 32.000 0.00 0.00 0.00 3.41
210 211 6.869913 ACATTTCAGCAAGTAACAATTCCATG 59.130 34.615 0.00 0.00 0.00 3.66
211 212 6.647334 TTTCAGCAAGTAACAATTCCATGA 57.353 33.333 0.00 0.00 0.00 3.07
212 213 6.839124 TTCAGCAAGTAACAATTCCATGAT 57.161 33.333 0.00 0.00 0.00 2.45
213 214 7.936496 TTCAGCAAGTAACAATTCCATGATA 57.064 32.000 0.00 0.00 0.00 2.15
214 215 7.936496 TCAGCAAGTAACAATTCCATGATAA 57.064 32.000 0.00 0.00 0.00 1.75
215 216 8.347004 TCAGCAAGTAACAATTCCATGATAAA 57.653 30.769 0.00 0.00 0.00 1.40
216 217 8.243426 TCAGCAAGTAACAATTCCATGATAAAC 58.757 33.333 0.00 0.00 0.00 2.01
217 218 8.028354 CAGCAAGTAACAATTCCATGATAAACA 58.972 33.333 0.00 0.00 0.00 2.83
218 219 8.752187 AGCAAGTAACAATTCCATGATAAACAT 58.248 29.630 0.00 0.00 40.17 2.71
234 235 8.929827 TGATAAACATGTAAAGCAATTCCATG 57.070 30.769 0.00 6.36 39.00 3.66
235 236 8.530311 TGATAAACATGTAAAGCAATTCCATGT 58.470 29.630 0.00 7.38 45.81 3.21
309 310 9.806203 TTCCAAATCATTTGAATATAGTTGCAG 57.194 29.630 11.98 0.00 43.26 4.41
310 311 8.415553 TCCAAATCATTTGAATATAGTTGCAGG 58.584 33.333 11.98 0.00 43.26 4.85
311 312 8.415553 CCAAATCATTTGAATATAGTTGCAGGA 58.584 33.333 11.98 0.00 43.26 3.86
312 313 9.241317 CAAATCATTTGAATATAGTTGCAGGAC 57.759 33.333 3.82 0.00 43.26 3.85
313 314 8.523915 AATCATTTGAATATAGTTGCAGGACA 57.476 30.769 0.00 0.00 0.00 4.02
314 315 7.320443 TCATTTGAATATAGTTGCAGGACAC 57.680 36.000 0.00 0.00 0.00 3.67
315 316 6.883756 TCATTTGAATATAGTTGCAGGACACA 59.116 34.615 0.00 0.00 0.00 3.72
316 317 7.557358 TCATTTGAATATAGTTGCAGGACACAT 59.443 33.333 0.00 0.00 0.00 3.21
317 318 8.839343 CATTTGAATATAGTTGCAGGACACATA 58.161 33.333 0.00 0.00 0.00 2.29
318 319 8.800370 TTTGAATATAGTTGCAGGACACATAA 57.200 30.769 0.00 0.00 0.00 1.90
319 320 8.978874 TTGAATATAGTTGCAGGACACATAAT 57.021 30.769 0.00 0.00 0.00 1.28
320 321 8.978874 TGAATATAGTTGCAGGACACATAATT 57.021 30.769 0.00 0.00 0.00 1.40
321 322 9.056005 TGAATATAGTTGCAGGACACATAATTC 57.944 33.333 0.00 0.00 0.00 2.17
322 323 7.986085 ATATAGTTGCAGGACACATAATTCC 57.014 36.000 0.00 0.00 0.00 3.01
323 324 4.032960 AGTTGCAGGACACATAATTCCA 57.967 40.909 0.00 0.00 33.92 3.53
324 325 4.406456 AGTTGCAGGACACATAATTCCAA 58.594 39.130 0.00 0.00 33.92 3.53
325 326 4.218417 AGTTGCAGGACACATAATTCCAAC 59.782 41.667 0.00 0.00 33.92 3.77
326 327 3.760738 TGCAGGACACATAATTCCAACA 58.239 40.909 0.00 0.00 33.92 3.33
327 328 4.148079 TGCAGGACACATAATTCCAACAA 58.852 39.130 0.00 0.00 33.92 2.83
328 329 4.771577 TGCAGGACACATAATTCCAACAAT 59.228 37.500 0.00 0.00 33.92 2.71
329 330 5.104374 GCAGGACACATAATTCCAACAATG 58.896 41.667 0.00 0.00 33.92 2.82
330 331 5.336690 GCAGGACACATAATTCCAACAATGT 60.337 40.000 0.00 0.00 33.92 2.71
331 332 6.690530 CAGGACACATAATTCCAACAATGTT 58.309 36.000 0.00 0.00 33.92 2.71
332 333 7.153985 CAGGACACATAATTCCAACAATGTTT 58.846 34.615 0.00 0.00 33.92 2.83
333 334 7.116662 CAGGACACATAATTCCAACAATGTTTG 59.883 37.037 0.00 0.00 33.92 2.93
334 335 6.128580 GGACACATAATTCCAACAATGTTTGC 60.129 38.462 0.00 0.00 30.32 3.68
335 336 6.523840 ACACATAATTCCAACAATGTTTGCT 58.476 32.000 0.00 0.00 30.32 3.91
336 337 7.665690 ACACATAATTCCAACAATGTTTGCTA 58.334 30.769 0.00 0.00 30.32 3.49
337 338 7.814107 ACACATAATTCCAACAATGTTTGCTAG 59.186 33.333 0.00 0.00 30.32 3.42
338 339 7.814107 CACATAATTCCAACAATGTTTGCTAGT 59.186 33.333 0.00 0.00 30.32 2.57
339 340 9.019656 ACATAATTCCAACAATGTTTGCTAGTA 57.980 29.630 0.00 0.00 0.00 1.82
340 341 9.507280 CATAATTCCAACAATGTTTGCTAGTAG 57.493 33.333 0.00 0.00 0.00 2.57
341 342 7.524717 AATTCCAACAATGTTTGCTAGTAGT 57.475 32.000 0.00 0.00 0.00 2.73
342 343 5.940192 TCCAACAATGTTTGCTAGTAGTG 57.060 39.130 0.00 0.00 0.00 2.74
343 344 5.616270 TCCAACAATGTTTGCTAGTAGTGA 58.384 37.500 0.00 0.00 0.00 3.41
344 345 5.468746 TCCAACAATGTTTGCTAGTAGTGAC 59.531 40.000 0.00 0.00 0.00 3.67
345 346 5.334879 CCAACAATGTTTGCTAGTAGTGACC 60.335 44.000 0.00 0.00 0.00 4.02
346 347 5.228945 ACAATGTTTGCTAGTAGTGACCT 57.771 39.130 0.00 0.00 0.00 3.85
347 348 6.354794 ACAATGTTTGCTAGTAGTGACCTA 57.645 37.500 0.00 0.00 0.00 3.08
348 349 6.765403 ACAATGTTTGCTAGTAGTGACCTAA 58.235 36.000 0.00 0.00 0.00 2.69
349 350 7.221450 ACAATGTTTGCTAGTAGTGACCTAAA 58.779 34.615 0.00 0.00 0.00 1.85
350 351 7.883311 ACAATGTTTGCTAGTAGTGACCTAAAT 59.117 33.333 0.00 0.00 0.00 1.40
351 352 7.849804 ATGTTTGCTAGTAGTGACCTAAATG 57.150 36.000 0.00 0.00 0.00 2.32
352 353 5.642063 TGTTTGCTAGTAGTGACCTAAATGC 59.358 40.000 0.00 0.00 0.00 3.56
353 354 5.677319 TTGCTAGTAGTGACCTAAATGCT 57.323 39.130 0.00 0.00 0.00 3.79
354 355 5.263968 TGCTAGTAGTGACCTAAATGCTC 57.736 43.478 0.00 0.00 0.00 4.26
355 356 4.956700 TGCTAGTAGTGACCTAAATGCTCT 59.043 41.667 0.00 0.00 0.00 4.09
356 357 5.422331 TGCTAGTAGTGACCTAAATGCTCTT 59.578 40.000 0.00 0.00 0.00 2.85
357 358 6.605995 TGCTAGTAGTGACCTAAATGCTCTTA 59.394 38.462 0.00 0.00 0.00 2.10
358 359 7.287927 TGCTAGTAGTGACCTAAATGCTCTTAT 59.712 37.037 0.00 0.00 0.00 1.73
359 360 8.794553 GCTAGTAGTGACCTAAATGCTCTTATA 58.205 37.037 0.00 0.00 0.00 0.98
373 374 5.580998 TGCTCTTATATTCGGAGGGAGTAT 58.419 41.667 0.00 0.00 32.85 2.12
375 376 6.497259 TGCTCTTATATTCGGAGGGAGTATTT 59.503 38.462 0.00 0.00 30.95 1.40
376 377 7.016268 TGCTCTTATATTCGGAGGGAGTATTTT 59.984 37.037 0.00 0.00 30.95 1.82
401 402 2.825861 TTAGAAAAACGGGTCGAGCT 57.174 45.000 15.18 0.00 0.00 4.09
475 478 2.704065 TGAACCCGATCCTAATTCTCCC 59.296 50.000 0.00 0.00 0.00 4.30
492 495 1.276140 CCCGGACCCTACCCATGAAA 61.276 60.000 0.73 0.00 0.00 2.69
493 496 0.843984 CCGGACCCTACCCATGAAAT 59.156 55.000 0.00 0.00 0.00 2.17
494 497 1.476833 CCGGACCCTACCCATGAAATG 60.477 57.143 0.00 0.00 46.21 2.32
495 498 1.211949 CGGACCCTACCCATGAAATGT 59.788 52.381 0.00 0.00 44.81 2.71
949 952 2.387757 CTCTCCCTCTTCCTTCCTCTG 58.612 57.143 0.00 0.00 0.00 3.35
1174 1177 8.027771 CCGTCCTACTATACCATCTAATTGTTC 58.972 40.741 0.00 0.00 0.00 3.18
1242 1253 2.284258 CCAATTTTGCCCCCGGGA 60.284 61.111 26.32 0.00 37.50 5.14
1247 1258 0.917333 ATTTTGCCCCCGGGACTAGA 60.917 55.000 26.32 6.33 37.50 2.43
1497 1509 4.583073 AGGTTTTGGGTCGGATTATAATGC 59.417 41.667 1.78 4.64 0.00 3.56
1609 1710 1.979855 TGTAGTGCATGCTTTGGTGT 58.020 45.000 20.33 0.00 0.00 4.16
1623 1724 0.036164 TGGTGTGCTGCCGTTATCTT 59.964 50.000 0.00 0.00 0.00 2.40
1625 1726 1.438651 GTGTGCTGCCGTTATCTTGA 58.561 50.000 0.00 0.00 0.00 3.02
1660 1761 1.369625 GGTATGGGAGTCGTTTGCTG 58.630 55.000 0.00 0.00 0.00 4.41
1876 1977 9.120538 GATGGTAATGGTTCTGTTTATGTATGT 57.879 33.333 0.00 0.00 0.00 2.29
1947 2048 2.121564 CTGCACGCCAGTTGGTTCAG 62.122 60.000 0.00 0.00 36.79 3.02
2064 2165 5.572126 CGAACAGCAGGTTAGTAGTTTACTC 59.428 44.000 0.00 0.00 40.63 2.59
2069 2170 7.121759 ACAGCAGGTTAGTAGTTTACTCGATAA 59.878 37.037 0.00 0.00 40.14 1.75
2175 2276 8.660373 AGCATTAAGTCTCTTTAGTTTTGATCG 58.340 33.333 0.00 0.00 0.00 3.69
2201 2302 9.736023 GATAATTTGACAGTCTGTTTTCTGTTT 57.264 29.630 7.00 0.00 43.64 2.83
2538 2639 7.470900 GGATCTCTGTAAAAGCTCTTTTCATG 58.529 38.462 10.51 0.00 41.39 3.07
2544 2645 8.559536 TCTGTAAAAGCTCTTTTCATGTACTTG 58.440 33.333 10.51 2.36 41.39 3.16
2559 2660 7.728148 TCATGTACTTGTGTGGAACTAGTTAA 58.272 34.615 8.42 0.00 41.33 2.01
2562 2663 6.762661 TGTACTTGTGTGGAACTAGTTAAACC 59.237 38.462 8.42 6.49 41.33 3.27
2574 2675 9.174166 GGAACTAGTTAAACCATGTACATCATT 57.826 33.333 8.42 4.13 34.09 2.57
2578 2679 7.775053 AGTTAAACCATGTACATCATTTGGT 57.225 32.000 18.13 15.28 40.06 3.67
2624 2729 4.935205 TCCTGATTTCGTTCTTACACCATG 59.065 41.667 0.00 0.00 0.00 3.66
2679 2784 8.076178 GCAACTTAAACATGAACAGTTCTACAT 58.924 33.333 14.51 0.00 0.00 2.29
2791 2979 8.911918 TTGTACTTATTAATCAATGCCCGTAT 57.088 30.769 0.00 0.00 0.00 3.06
2792 2980 8.911918 TGTACTTATTAATCAATGCCCGTATT 57.088 30.769 0.00 0.00 0.00 1.89
2822 3012 4.581309 TCTGATTTTGATGAGCTCCCTT 57.419 40.909 12.15 0.00 0.00 3.95
2834 3024 8.727100 TGATGAGCTCCCTTCTATTTCTATTA 57.273 34.615 12.15 0.00 0.00 0.98
2835 3025 9.331466 TGATGAGCTCCCTTCTATTTCTATTAT 57.669 33.333 12.15 0.00 0.00 1.28
2837 3027 7.831753 TGAGCTCCCTTCTATTTCTATTATCG 58.168 38.462 12.15 0.00 0.00 2.92
2900 3090 3.056179 TCGTGATCTTACCATCTGTTGCA 60.056 43.478 0.00 0.00 0.00 4.08
2917 3107 2.629002 CAGTATATGCCCCCAACGC 58.371 57.895 0.00 0.00 0.00 4.84
3033 3223 2.097825 GAGGCTGTCATGGCTGAATTT 58.902 47.619 8.55 0.00 43.09 1.82
3078 3268 3.222603 TCCCCAAAAGCTTCAAGAGTTC 58.777 45.455 0.00 0.00 0.00 3.01
3090 3280 5.163612 GCTTCAAGAGTTCTCAACCTTTTGT 60.164 40.000 2.64 0.00 34.02 2.83
3095 3285 8.798402 TCAAGAGTTCTCAACCTTTTGTTTTAA 58.202 29.630 2.64 0.00 34.00 1.52
3162 3353 9.635520 ATGAAGATTTGTTTCTCTGCTAAATTG 57.364 29.630 0.00 0.00 0.00 2.32
3171 3362 8.015087 TGTTTCTCTGCTAAATTGTTATTGTCG 58.985 33.333 0.00 0.00 0.00 4.35
3206 3397 0.250467 TTGCACTTGAGTCTCTGCCC 60.250 55.000 9.40 0.00 0.00 5.36
3231 3422 3.259876 TGCTCCCGTTACTGAAGTACAAT 59.740 43.478 0.00 0.00 0.00 2.71
3245 3436 8.406297 ACTGAAGTACAATCTGAAAAGAAAACC 58.594 33.333 10.97 0.00 0.00 3.27
3248 3439 9.581099 GAAGTACAATCTGAAAAGAAAACCAAA 57.419 29.630 0.00 0.00 0.00 3.28
3333 3524 1.751924 CTACTAAAGCGCCAGAGAGGT 59.248 52.381 2.29 0.00 40.61 3.85
3378 3569 6.983906 AAGGTTTTGATCTCATGTTCCTTT 57.016 33.333 0.00 0.00 30.00 3.11
3412 3603 5.726980 TTAGCCTGTTTCATTTGCATCTT 57.273 34.783 0.00 0.00 0.00 2.40
3416 3607 6.799512 AGCCTGTTTCATTTGCATCTTATAC 58.200 36.000 0.00 0.00 0.00 1.47
3443 3634 7.609760 TTTATGGTGTACTGATGATGTGTTC 57.390 36.000 0.00 0.00 0.00 3.18
3701 3892 7.450323 TCGATTATGGTATCAGATGTCCTGTTA 59.550 37.037 0.00 0.00 43.38 2.41
3722 3913 9.825972 CTGTTATTTCTTGATTGTCGTTTGTAT 57.174 29.630 0.00 0.00 0.00 2.29
3732 3923 9.566530 TTGATTGTCGTTTGTATATTGATTTGG 57.433 29.630 0.00 0.00 0.00 3.28
3733 3924 8.187480 TGATTGTCGTTTGTATATTGATTTGGG 58.813 33.333 0.00 0.00 0.00 4.12
3734 3925 5.885881 TGTCGTTTGTATATTGATTTGGGC 58.114 37.500 0.00 0.00 0.00 5.36
3735 3926 5.650266 TGTCGTTTGTATATTGATTTGGGCT 59.350 36.000 0.00 0.00 0.00 5.19
3736 3927 6.151985 TGTCGTTTGTATATTGATTTGGGCTT 59.848 34.615 0.00 0.00 0.00 4.35
3737 3928 6.472163 GTCGTTTGTATATTGATTTGGGCTTG 59.528 38.462 0.00 0.00 0.00 4.01
3738 3929 5.231991 CGTTTGTATATTGATTTGGGCTTGC 59.768 40.000 0.00 0.00 0.00 4.01
3739 3930 5.929058 TTGTATATTGATTTGGGCTTGCA 57.071 34.783 0.00 0.00 0.00 4.08
3740 3931 5.518848 TGTATATTGATTTGGGCTTGCAG 57.481 39.130 0.00 0.00 0.00 4.41
3741 3932 2.965572 TATTGATTTGGGCTTGCAGC 57.034 45.000 0.11 0.11 41.46 5.25
3742 3933 0.978151 ATTGATTTGGGCTTGCAGCA 59.022 45.000 9.78 0.00 44.75 4.41
3743 3934 0.978151 TTGATTTGGGCTTGCAGCAT 59.022 45.000 0.00 0.00 44.75 3.79
3744 3935 0.248012 TGATTTGGGCTTGCAGCATG 59.752 50.000 0.00 0.00 44.75 4.06
3765 3956 3.545703 GCTACAAGCATATCCCTGTTGT 58.454 45.455 0.00 0.00 41.89 3.32
3766 3957 3.561725 GCTACAAGCATATCCCTGTTGTC 59.438 47.826 0.00 0.00 41.89 3.18
3767 3958 4.684485 GCTACAAGCATATCCCTGTTGTCT 60.684 45.833 0.00 0.00 41.89 3.41
3768 3959 3.878778 ACAAGCATATCCCTGTTGTCTC 58.121 45.455 0.00 0.00 0.00 3.36
3769 3960 3.209410 CAAGCATATCCCTGTTGTCTCC 58.791 50.000 0.00 0.00 0.00 3.71
3770 3961 2.769209 AGCATATCCCTGTTGTCTCCT 58.231 47.619 0.00 0.00 0.00 3.69
3771 3962 2.703007 AGCATATCCCTGTTGTCTCCTC 59.297 50.000 0.00 0.00 0.00 3.71
3772 3963 2.703007 GCATATCCCTGTTGTCTCCTCT 59.297 50.000 0.00 0.00 0.00 3.69
3773 3964 3.494048 GCATATCCCTGTTGTCTCCTCTG 60.494 52.174 0.00 0.00 0.00 3.35
3774 3965 1.577736 ATCCCTGTTGTCTCCTCTGG 58.422 55.000 0.00 0.00 0.00 3.86
3775 3966 0.487325 TCCCTGTTGTCTCCTCTGGA 59.513 55.000 0.00 0.00 0.00 3.86
3782 3973 2.563179 GTTGTCTCCTCTGGACAGCTAA 59.437 50.000 0.00 0.00 43.29 3.09
3793 3984 7.669722 TCCTCTGGACAGCTAAAATTAAATTGT 59.330 33.333 0.00 0.00 0.00 2.71
3794 3985 7.756722 CCTCTGGACAGCTAAAATTAAATTGTG 59.243 37.037 0.00 0.00 0.00 3.33
3795 3986 8.177119 TCTGGACAGCTAAAATTAAATTGTGT 57.823 30.769 0.00 0.00 0.00 3.72
3796 3987 8.637986 TCTGGACAGCTAAAATTAAATTGTGTT 58.362 29.630 0.00 0.00 0.00 3.32
3797 3988 9.906660 CTGGACAGCTAAAATTAAATTGTGTTA 57.093 29.630 0.00 0.00 0.00 2.41
3810 4001 9.974980 ATTAAATTGTGTTAACTGTTAACTGGG 57.025 29.630 31.82 5.14 44.46 4.45
3837 4028 8.421249 TTCTGTTTCATTGGTTGGATCTTTAT 57.579 30.769 0.00 0.00 0.00 1.40
3838 4029 8.055279 TCTGTTTCATTGGTTGGATCTTTATC 57.945 34.615 0.00 0.00 0.00 1.75
3866 4057 2.289444 TGGCTACTTTGCACTCAGGTAC 60.289 50.000 0.00 0.00 34.04 3.34
3877 4068 4.037803 TGCACTCAGGTACGTAAACAGTTA 59.962 41.667 0.00 0.00 0.00 2.24
3887 4078 6.739550 GGTACGTAAACAGTTACATTTCATGC 59.260 38.462 0.00 0.00 39.78 4.06
3956 4147 3.192001 CACATAGCAAGTTTGGTGCAGAT 59.808 43.478 6.81 0.00 44.74 2.90
3957 4148 4.395854 CACATAGCAAGTTTGGTGCAGATA 59.604 41.667 6.81 0.00 44.74 1.98
3977 4168 5.765182 AGATACATTTATGTAGTTGCTGGGC 59.235 40.000 8.41 0.00 45.46 5.36
4009 4200 1.900498 GCTGCTGGCCAAGTCTGTT 60.900 57.895 7.01 0.00 34.27 3.16
4010 4201 1.860484 GCTGCTGGCCAAGTCTGTTC 61.860 60.000 7.01 0.00 34.27 3.18
4033 4224 2.396955 GCTGCTGCTGCTACTGGTG 61.397 63.158 22.10 0.29 40.48 4.17
4034 4225 1.294459 CTGCTGCTGCTACTGGTGA 59.706 57.895 17.00 0.00 40.48 4.02
4035 4226 0.107800 CTGCTGCTGCTACTGGTGAT 60.108 55.000 17.00 0.00 40.48 3.06
4036 4227 0.107993 TGCTGCTGCTACTGGTGATC 60.108 55.000 17.00 0.00 40.48 2.92
4037 4228 0.177604 GCTGCTGCTACTGGTGATCT 59.822 55.000 8.53 0.00 36.03 2.75
4067 4258 7.648142 TGTTAAAATGGTCTGTTGAGATTGAC 58.352 34.615 0.00 0.00 0.00 3.18
4153 4344 6.366061 GTGTTCCTAGAAATGGCAAATTGAAC 59.634 38.462 0.00 1.35 0.00 3.18
4157 4350 7.504403 TCCTAGAAATGGCAAATTGAACAAAA 58.496 30.769 0.00 0.00 0.00 2.44
4213 4408 3.981211 TCAAGTACCGTGTTGAGTAACC 58.019 45.455 0.00 0.00 35.92 2.85
4219 4414 4.460948 ACCGTGTTGAGTAACCGATTAT 57.539 40.909 0.00 0.00 35.92 1.28
4223 4418 6.019152 CCGTGTTGAGTAACCGATTATTTTG 58.981 40.000 0.00 0.00 35.92 2.44
4244 4439 2.885135 AGAATGGATGTGGCACTGAA 57.115 45.000 19.83 0.00 0.00 3.02
4327 4522 8.909708 AACAACATTGACAATTATATTGGACG 57.090 30.769 0.00 0.00 0.00 4.79
4328 4523 6.972328 ACAACATTGACAATTATATTGGACGC 59.028 34.615 0.00 0.00 0.00 5.19
4329 4524 6.072112 ACATTGACAATTATATTGGACGCC 57.928 37.500 0.00 0.00 0.00 5.68
4330 4525 4.804608 TTGACAATTATATTGGACGCCG 57.195 40.909 4.61 0.00 0.00 6.46
4331 4526 4.061357 TGACAATTATATTGGACGCCGA 57.939 40.909 0.00 0.00 0.00 5.54
4332 4527 4.637276 TGACAATTATATTGGACGCCGAT 58.363 39.130 0.00 4.37 0.00 4.18
4333 4528 5.785243 TGACAATTATATTGGACGCCGATA 58.215 37.500 7.89 7.89 34.70 2.92
4334 4529 6.224584 TGACAATTATATTGGACGCCGATAA 58.775 36.000 9.11 5.53 33.99 1.75
4335 4530 6.367695 TGACAATTATATTGGACGCCGATAAG 59.632 38.462 9.11 2.74 33.99 1.73
4336 4531 6.228258 ACAATTATATTGGACGCCGATAAGT 58.772 36.000 9.11 2.75 33.99 2.24
4337 4532 6.147164 ACAATTATATTGGACGCCGATAAGTG 59.853 38.462 9.11 12.86 33.99 3.16
4338 4533 1.860676 TATTGGACGCCGATAAGTGC 58.139 50.000 0.00 0.00 27.74 4.40
4339 4534 0.814010 ATTGGACGCCGATAAGTGCC 60.814 55.000 0.00 0.00 0.00 5.01
4340 4535 2.173758 TTGGACGCCGATAAGTGCCA 62.174 55.000 0.00 0.00 0.00 4.92
4341 4536 2.171725 GGACGCCGATAAGTGCCAC 61.172 63.158 0.00 0.00 0.00 5.01
4342 4537 1.447140 GACGCCGATAAGTGCCACA 60.447 57.895 0.00 0.00 0.00 4.17
4343 4538 1.693083 GACGCCGATAAGTGCCACAC 61.693 60.000 0.00 0.00 34.10 3.82
4344 4539 2.798501 CGCCGATAAGTGCCACACG 61.799 63.158 0.00 0.00 39.64 4.49
4345 4540 1.740296 GCCGATAAGTGCCACACGT 60.740 57.895 0.00 0.00 39.64 4.49
4346 4541 1.966493 GCCGATAAGTGCCACACGTG 61.966 60.000 15.48 15.48 39.64 4.49
4347 4542 0.669318 CCGATAAGTGCCACACGTGT 60.669 55.000 17.22 17.22 39.64 4.49
4348 4543 0.438445 CGATAAGTGCCACACGTGTG 59.562 55.000 36.13 36.13 45.23 3.82
4358 4553 4.371975 CACGTGTGGGTGTTAGGG 57.628 61.111 7.58 0.00 33.24 3.53
4359 4554 1.749665 CACGTGTGGGTGTTAGGGA 59.250 57.895 7.58 0.00 33.24 4.20
4360 4555 0.320421 CACGTGTGGGTGTTAGGGAG 60.320 60.000 7.58 0.00 33.24 4.30
4361 4556 0.761702 ACGTGTGGGTGTTAGGGAGT 60.762 55.000 0.00 0.00 0.00 3.85
4362 4557 0.037605 CGTGTGGGTGTTAGGGAGTC 60.038 60.000 0.00 0.00 0.00 3.36
4363 4558 1.349067 GTGTGGGTGTTAGGGAGTCT 58.651 55.000 0.00 0.00 0.00 3.24
4364 4559 1.002087 GTGTGGGTGTTAGGGAGTCTG 59.998 57.143 0.00 0.00 0.00 3.51
4365 4560 0.036294 GTGGGTGTTAGGGAGTCTGC 60.036 60.000 0.00 0.00 0.00 4.26
4366 4561 1.198759 TGGGTGTTAGGGAGTCTGCC 61.199 60.000 1.22 1.22 0.00 4.85
4375 4570 3.346426 GGAGTCTGCCCACACATTT 57.654 52.632 0.00 0.00 0.00 2.32
4376 4571 1.620822 GGAGTCTGCCCACACATTTT 58.379 50.000 0.00 0.00 0.00 1.82
4377 4572 1.270550 GGAGTCTGCCCACACATTTTG 59.729 52.381 0.00 0.00 0.00 2.44
4378 4573 1.956477 GAGTCTGCCCACACATTTTGT 59.044 47.619 0.00 0.00 39.97 2.83
4395 4590 8.862325 ACATTTTGTGTGATGTATAAGAGGAA 57.138 30.769 0.00 0.00 40.28 3.36
4396 4591 8.730680 ACATTTTGTGTGATGTATAAGAGGAAC 58.269 33.333 0.00 0.00 40.28 3.62
4397 4592 8.729756 CATTTTGTGTGATGTATAAGAGGAACA 58.270 33.333 0.00 0.00 0.00 3.18
4398 4593 7.905604 TTTGTGTGATGTATAAGAGGAACAG 57.094 36.000 0.00 0.00 0.00 3.16
4399 4594 5.419542 TGTGTGATGTATAAGAGGAACAGC 58.580 41.667 0.00 0.00 0.00 4.40
4400 4595 4.811557 GTGTGATGTATAAGAGGAACAGCC 59.188 45.833 0.00 0.00 0.00 4.85
4401 4596 4.141711 TGTGATGTATAAGAGGAACAGCCC 60.142 45.833 0.00 0.00 37.37 5.19
4402 4597 4.037222 TGATGTATAAGAGGAACAGCCCA 58.963 43.478 0.00 0.00 37.37 5.36
4403 4598 3.906720 TGTATAAGAGGAACAGCCCAC 57.093 47.619 0.00 0.00 37.37 4.61
4404 4599 3.178046 TGTATAAGAGGAACAGCCCACA 58.822 45.455 0.00 0.00 37.37 4.17
4405 4600 2.789409 ATAAGAGGAACAGCCCACAC 57.211 50.000 0.00 0.00 37.37 3.82
4406 4601 1.429930 TAAGAGGAACAGCCCACACA 58.570 50.000 0.00 0.00 37.37 3.72
4407 4602 0.179018 AAGAGGAACAGCCCACACAC 60.179 55.000 0.00 0.00 37.37 3.82
4408 4603 1.600916 GAGGAACAGCCCACACACC 60.601 63.158 0.00 0.00 37.37 4.16
4409 4604 2.056906 GAGGAACAGCCCACACACCT 62.057 60.000 0.00 0.00 37.37 4.00
4410 4605 0.766674 AGGAACAGCCCACACACCTA 60.767 55.000 0.00 0.00 37.37 3.08
4411 4606 0.605589 GGAACAGCCCACACACCTAC 60.606 60.000 0.00 0.00 0.00 3.18
4412 4607 0.949105 GAACAGCCCACACACCTACG 60.949 60.000 0.00 0.00 0.00 3.51
4413 4608 1.692173 AACAGCCCACACACCTACGT 61.692 55.000 0.00 0.00 0.00 3.57
4414 4609 1.667830 CAGCCCACACACCTACGTG 60.668 63.158 0.00 0.00 46.11 4.49
4422 4617 4.466133 CACCTACGTGTGGGCAAA 57.534 55.556 12.88 0.00 35.10 3.68
4423 4618 2.709170 CACCTACGTGTGGGCAAAA 58.291 52.632 12.88 0.00 35.10 2.44
4424 4619 0.309612 CACCTACGTGTGGGCAAAAC 59.690 55.000 12.88 0.00 35.10 2.43
4425 4620 0.107116 ACCTACGTGTGGGCAAAACA 60.107 50.000 12.88 0.00 34.14 2.83
4426 4621 1.025812 CCTACGTGTGGGCAAAACAA 58.974 50.000 0.00 0.00 0.00 2.83
4427 4622 1.001815 CCTACGTGTGGGCAAAACAAG 60.002 52.381 0.00 0.00 33.85 3.16
4428 4623 1.673920 CTACGTGTGGGCAAAACAAGT 59.326 47.619 0.00 9.75 41.91 3.16
4429 4624 1.752683 ACGTGTGGGCAAAACAAGTA 58.247 45.000 4.50 0.00 38.27 2.24
4430 4625 2.093106 ACGTGTGGGCAAAACAAGTAA 58.907 42.857 4.50 0.00 38.27 2.24
4431 4626 2.691011 ACGTGTGGGCAAAACAAGTAAT 59.309 40.909 4.50 0.00 38.27 1.89
4432 4627 3.049206 CGTGTGGGCAAAACAAGTAATG 58.951 45.455 0.00 0.00 0.00 1.90
4433 4628 3.490078 CGTGTGGGCAAAACAAGTAATGT 60.490 43.478 0.00 0.00 46.82 2.71
4434 4629 4.048504 GTGTGGGCAAAACAAGTAATGTC 58.951 43.478 0.00 0.00 42.99 3.06
4435 4630 3.068873 TGTGGGCAAAACAAGTAATGTCC 59.931 43.478 2.80 2.80 42.99 4.02
4436 4631 3.068873 GTGGGCAAAACAAGTAATGTCCA 59.931 43.478 7.22 7.22 44.77 4.02
4437 4632 3.068873 TGGGCAAAACAAGTAATGTCCAC 59.931 43.478 7.22 0.00 42.30 4.02
4438 4633 3.068873 GGGCAAAACAAGTAATGTCCACA 59.931 43.478 4.49 0.00 42.99 4.17
4439 4634 4.048504 GGCAAAACAAGTAATGTCCACAC 58.951 43.478 0.00 0.00 42.99 3.82
4440 4635 4.440802 GGCAAAACAAGTAATGTCCACACA 60.441 41.667 0.00 0.00 42.99 3.72
4441 4636 5.288804 GCAAAACAAGTAATGTCCACACAT 58.711 37.500 0.00 0.00 45.89 3.21
4442 4637 5.402270 GCAAAACAAGTAATGTCCACACATC 59.598 40.000 0.00 0.00 42.89 3.06
4443 4638 6.735694 GCAAAACAAGTAATGTCCACACATCT 60.736 38.462 0.00 0.00 42.89 2.90
4444 4639 6.560253 AAACAAGTAATGTCCACACATCTC 57.440 37.500 0.00 0.00 42.89 2.75
4445 4640 5.489792 ACAAGTAATGTCCACACATCTCT 57.510 39.130 0.00 0.00 42.89 3.10
4446 4641 5.869579 ACAAGTAATGTCCACACATCTCTT 58.130 37.500 0.00 0.00 42.89 2.85
4447 4642 6.299141 ACAAGTAATGTCCACACATCTCTTT 58.701 36.000 0.00 0.00 42.89 2.52
4448 4643 6.772716 ACAAGTAATGTCCACACATCTCTTTT 59.227 34.615 0.00 0.00 42.89 2.27
4449 4644 7.285401 ACAAGTAATGTCCACACATCTCTTTTT 59.715 33.333 0.00 0.00 42.89 1.94
4450 4645 7.440523 AGTAATGTCCACACATCTCTTTTTC 57.559 36.000 0.00 0.00 42.89 2.29
4451 4646 7.227156 AGTAATGTCCACACATCTCTTTTTCT 58.773 34.615 0.00 0.00 42.89 2.52
4452 4647 6.966534 AATGTCCACACATCTCTTTTTCTT 57.033 33.333 0.00 0.00 42.89 2.52
4453 4648 6.566197 ATGTCCACACATCTCTTTTTCTTC 57.434 37.500 0.00 0.00 39.15 2.87
4454 4649 5.684704 TGTCCACACATCTCTTTTTCTTCT 58.315 37.500 0.00 0.00 0.00 2.85
4455 4650 5.760253 TGTCCACACATCTCTTTTTCTTCTC 59.240 40.000 0.00 0.00 0.00 2.87
4456 4651 5.180304 GTCCACACATCTCTTTTTCTTCTCC 59.820 44.000 0.00 0.00 0.00 3.71
4457 4652 4.457257 CCACACATCTCTTTTTCTTCTCCC 59.543 45.833 0.00 0.00 0.00 4.30
4458 4653 4.153117 CACACATCTCTTTTTCTTCTCCCG 59.847 45.833 0.00 0.00 0.00 5.14
4459 4654 4.040461 ACACATCTCTTTTTCTTCTCCCGA 59.960 41.667 0.00 0.00 0.00 5.14
4460 4655 5.181748 CACATCTCTTTTTCTTCTCCCGAT 58.818 41.667 0.00 0.00 0.00 4.18
4461 4656 5.293079 CACATCTCTTTTTCTTCTCCCGATC 59.707 44.000 0.00 0.00 0.00 3.69
4462 4657 4.473477 TCTCTTTTTCTTCTCCCGATCC 57.527 45.455 0.00 0.00 0.00 3.36
4463 4658 3.197983 TCTCTTTTTCTTCTCCCGATCCC 59.802 47.826 0.00 0.00 0.00 3.85
4464 4659 3.182152 TCTTTTTCTTCTCCCGATCCCT 58.818 45.455 0.00 0.00 0.00 4.20
4465 4660 3.197983 TCTTTTTCTTCTCCCGATCCCTC 59.802 47.826 0.00 0.00 0.00 4.30
4466 4661 2.552093 TTTCTTCTCCCGATCCCTCT 57.448 50.000 0.00 0.00 0.00 3.69
4467 4662 2.074729 TTCTTCTCCCGATCCCTCTC 57.925 55.000 0.00 0.00 0.00 3.20
4468 4663 0.927029 TCTTCTCCCGATCCCTCTCA 59.073 55.000 0.00 0.00 0.00 3.27
4469 4664 1.036707 CTTCTCCCGATCCCTCTCAC 58.963 60.000 0.00 0.00 0.00 3.51
4470 4665 0.335019 TTCTCCCGATCCCTCTCACA 59.665 55.000 0.00 0.00 0.00 3.58
4471 4666 0.395862 TCTCCCGATCCCTCTCACAC 60.396 60.000 0.00 0.00 0.00 3.82
4472 4667 1.729470 CTCCCGATCCCTCTCACACG 61.729 65.000 0.00 0.00 0.00 4.49
4473 4668 2.105128 CCGATCCCTCTCACACGC 59.895 66.667 0.00 0.00 0.00 5.34
4474 4669 2.278206 CGATCCCTCTCACACGCG 60.278 66.667 3.53 3.53 0.00 6.01
4475 4670 2.885861 GATCCCTCTCACACGCGT 59.114 61.111 5.58 5.58 0.00 6.01
4476 4671 1.517257 GATCCCTCTCACACGCGTG 60.517 63.158 35.99 35.99 45.08 5.34
4477 4672 3.649277 ATCCCTCTCACACGCGTGC 62.649 63.158 37.35 0.00 43.28 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.202475 TCTATTATGGCGCGTTGCTCA 60.202 47.619 8.43 0.00 45.43 4.26
1 2 1.457303 CTCTATTATGGCGCGTTGCTC 59.543 52.381 8.43 0.00 45.43 4.26
2 3 1.202533 ACTCTATTATGGCGCGTTGCT 60.203 47.619 8.43 0.00 45.43 3.91
3 4 1.070577 CACTCTATTATGGCGCGTTGC 60.071 52.381 8.43 0.00 45.38 4.17
4 5 2.201732 ACACTCTATTATGGCGCGTTG 58.798 47.619 8.43 0.00 0.00 4.10
5 6 2.596904 ACACTCTATTATGGCGCGTT 57.403 45.000 8.43 0.00 0.00 4.84
6 7 3.720949 TTACACTCTATTATGGCGCGT 57.279 42.857 8.43 0.00 0.00 6.01
7 8 5.389516 GGAATTTACACTCTATTATGGCGCG 60.390 44.000 0.00 0.00 0.00 6.86
8 9 5.701290 AGGAATTTACACTCTATTATGGCGC 59.299 40.000 0.00 0.00 0.00 6.53
9 10 7.155328 AGAGGAATTTACACTCTATTATGGCG 58.845 38.462 0.00 0.00 39.65 5.69
10 11 9.998106 TTAGAGGAATTTACACTCTATTATGGC 57.002 33.333 0.00 0.00 41.82 4.40
40 41 9.326489 AGATTACAGCCCTAATGTTGATCTATA 57.674 33.333 0.00 0.00 33.88 1.31
41 42 8.212259 AGATTACAGCCCTAATGTTGATCTAT 57.788 34.615 0.00 0.00 33.88 1.98
42 43 7.618019 AGATTACAGCCCTAATGTTGATCTA 57.382 36.000 0.00 0.00 33.88 1.98
43 44 6.506538 AGATTACAGCCCTAATGTTGATCT 57.493 37.500 0.00 0.00 32.26 2.75
44 45 7.934120 AGTTAGATTACAGCCCTAATGTTGATC 59.066 37.037 0.00 0.00 32.02 2.92
45 46 7.806180 AGTTAGATTACAGCCCTAATGTTGAT 58.194 34.615 0.00 0.00 32.02 2.57
46 47 7.195374 AGTTAGATTACAGCCCTAATGTTGA 57.805 36.000 0.00 0.00 32.02 3.18
49 50 8.521176 CGTATAGTTAGATTACAGCCCTAATGT 58.479 37.037 0.00 0.00 34.62 2.71
50 51 8.737175 TCGTATAGTTAGATTACAGCCCTAATG 58.263 37.037 0.00 0.00 0.00 1.90
51 52 8.874744 TCGTATAGTTAGATTACAGCCCTAAT 57.125 34.615 0.00 0.00 0.00 1.73
52 53 8.874744 ATCGTATAGTTAGATTACAGCCCTAA 57.125 34.615 0.00 0.00 0.00 2.69
53 54 8.327271 AGATCGTATAGTTAGATTACAGCCCTA 58.673 37.037 0.00 0.00 0.00 3.53
54 55 7.176490 AGATCGTATAGTTAGATTACAGCCCT 58.824 38.462 0.00 0.00 0.00 5.19
55 56 7.393841 AGATCGTATAGTTAGATTACAGCCC 57.606 40.000 0.00 0.00 0.00 5.19
56 57 8.124199 GCTAGATCGTATAGTTAGATTACAGCC 58.876 40.741 0.00 0.00 0.00 4.85
57 58 8.885722 AGCTAGATCGTATAGTTAGATTACAGC 58.114 37.037 0.00 0.00 0.00 4.40
59 60 9.381033 GGAGCTAGATCGTATAGTTAGATTACA 57.619 37.037 1.16 0.00 0.00 2.41
60 61 9.603921 AGGAGCTAGATCGTATAGTTAGATTAC 57.396 37.037 0.46 0.00 0.00 1.89
62 63 9.523168 AAAGGAGCTAGATCGTATAGTTAGATT 57.477 33.333 3.26 0.00 0.00 2.40
63 64 9.169592 GAAAGGAGCTAGATCGTATAGTTAGAT 57.830 37.037 3.26 0.00 0.00 1.98
64 65 8.155510 TGAAAGGAGCTAGATCGTATAGTTAGA 58.844 37.037 3.26 0.00 0.00 2.10
65 66 8.325421 TGAAAGGAGCTAGATCGTATAGTTAG 57.675 38.462 3.26 0.00 0.00 2.34
66 67 8.687292 TTGAAAGGAGCTAGATCGTATAGTTA 57.313 34.615 3.26 0.00 0.00 2.24
67 68 7.584122 TTGAAAGGAGCTAGATCGTATAGTT 57.416 36.000 3.26 0.00 0.00 2.24
68 69 7.768807 ATTGAAAGGAGCTAGATCGTATAGT 57.231 36.000 3.26 0.00 0.00 2.12
71 72 8.807118 TGATAATTGAAAGGAGCTAGATCGTAT 58.193 33.333 3.26 0.00 0.00 3.06
72 73 8.178313 TGATAATTGAAAGGAGCTAGATCGTA 57.822 34.615 3.26 0.00 0.00 3.43
73 74 7.055667 TGATAATTGAAAGGAGCTAGATCGT 57.944 36.000 1.16 0.00 0.00 3.73
74 75 7.116090 CACTGATAATTGAAAGGAGCTAGATCG 59.884 40.741 1.16 0.00 0.00 3.69
75 76 7.930865 ACACTGATAATTGAAAGGAGCTAGATC 59.069 37.037 0.00 0.00 0.00 2.75
76 77 7.800092 ACACTGATAATTGAAAGGAGCTAGAT 58.200 34.615 0.00 0.00 0.00 1.98
77 78 7.187824 ACACTGATAATTGAAAGGAGCTAGA 57.812 36.000 0.00 0.00 0.00 2.43
78 79 7.439655 GGTACACTGATAATTGAAAGGAGCTAG 59.560 40.741 0.00 0.00 0.00 3.42
79 80 7.272978 GGTACACTGATAATTGAAAGGAGCTA 58.727 38.462 0.00 0.00 0.00 3.32
80 81 6.116126 GGTACACTGATAATTGAAAGGAGCT 58.884 40.000 0.00 0.00 0.00 4.09
81 82 5.297029 GGGTACACTGATAATTGAAAGGAGC 59.703 44.000 0.00 0.00 0.00 4.70
82 83 5.523916 CGGGTACACTGATAATTGAAAGGAG 59.476 44.000 0.00 0.00 0.00 3.69
83 84 5.424757 CGGGTACACTGATAATTGAAAGGA 58.575 41.667 0.00 0.00 0.00 3.36
84 85 4.574828 CCGGGTACACTGATAATTGAAAGG 59.425 45.833 0.00 0.00 0.00 3.11
85 86 4.574828 CCCGGGTACACTGATAATTGAAAG 59.425 45.833 14.18 0.00 0.00 2.62
86 87 4.019141 ACCCGGGTACACTGATAATTGAAA 60.019 41.667 29.13 0.00 0.00 2.69
87 88 3.520317 ACCCGGGTACACTGATAATTGAA 59.480 43.478 29.13 0.00 0.00 2.69
88 89 3.109151 ACCCGGGTACACTGATAATTGA 58.891 45.455 29.13 0.00 0.00 2.57
89 90 3.553828 ACCCGGGTACACTGATAATTG 57.446 47.619 29.13 0.00 0.00 2.32
90 91 5.605488 AGATTACCCGGGTACACTGATAATT 59.395 40.000 33.34 7.11 0.00 1.40
91 92 5.152934 AGATTACCCGGGTACACTGATAAT 58.847 41.667 33.34 22.16 0.00 1.28
92 93 4.549668 AGATTACCCGGGTACACTGATAA 58.450 43.478 33.34 18.16 0.00 1.75
93 94 4.188937 AGATTACCCGGGTACACTGATA 57.811 45.455 33.34 17.11 0.00 2.15
94 95 3.042059 AGATTACCCGGGTACACTGAT 57.958 47.619 33.34 22.70 0.00 2.90
95 96 2.537633 AGATTACCCGGGTACACTGA 57.462 50.000 33.34 18.69 0.00 3.41
96 97 3.528532 GAAAGATTACCCGGGTACACTG 58.471 50.000 33.34 0.56 0.00 3.66
97 98 2.502947 GGAAAGATTACCCGGGTACACT 59.497 50.000 33.34 28.15 0.00 3.55
98 99 2.236893 TGGAAAGATTACCCGGGTACAC 59.763 50.000 33.34 26.51 0.00 2.90
99 100 2.549082 TGGAAAGATTACCCGGGTACA 58.451 47.619 33.34 21.83 0.00 2.90
100 101 3.632643 TTGGAAAGATTACCCGGGTAC 57.367 47.619 33.34 22.09 0.00 3.34
101 102 7.293062 AGTTATATTGGAAAGATTACCCGGGTA 59.707 37.037 30.02 30.02 28.14 3.69
102 103 6.102174 AGTTATATTGGAAAGATTACCCGGGT 59.898 38.462 32.66 32.66 28.14 5.28
103 104 6.540083 AGTTATATTGGAAAGATTACCCGGG 58.460 40.000 22.25 22.25 28.14 5.73
104 105 8.373220 AGTAGTTATATTGGAAAGATTACCCGG 58.627 37.037 0.00 0.00 28.14 5.73
128 129 8.963725 TCGATTATCGGTGGAATACAATATAGT 58.036 33.333 14.86 0.00 40.88 2.12
129 130 9.797556 TTCGATTATCGGTGGAATACAATATAG 57.202 33.333 14.86 0.00 40.88 1.31
131 132 9.098355 CATTCGATTATCGGTGGAATACAATAT 57.902 33.333 14.86 0.00 40.88 1.28
132 133 7.547722 CCATTCGATTATCGGTGGAATACAATA 59.452 37.037 24.68 0.00 43.57 1.90
133 134 6.371548 CCATTCGATTATCGGTGGAATACAAT 59.628 38.462 24.68 9.37 43.57 2.71
134 135 5.699001 CCATTCGATTATCGGTGGAATACAA 59.301 40.000 24.68 7.75 43.57 2.41
135 136 5.234752 CCATTCGATTATCGGTGGAATACA 58.765 41.667 24.68 0.00 43.57 2.29
136 137 4.092968 GCCATTCGATTATCGGTGGAATAC 59.907 45.833 29.48 16.06 43.57 1.89
137 138 4.020573 AGCCATTCGATTATCGGTGGAATA 60.021 41.667 29.48 5.27 43.57 1.75
138 139 3.074412 GCCATTCGATTATCGGTGGAAT 58.926 45.455 29.48 15.34 43.57 3.01
139 140 2.104111 AGCCATTCGATTATCGGTGGAA 59.896 45.455 29.48 14.02 43.57 3.53
140 141 1.691976 AGCCATTCGATTATCGGTGGA 59.308 47.619 29.48 11.70 43.57 4.02
141 142 2.169832 AGCCATTCGATTATCGGTGG 57.830 50.000 24.63 24.63 43.65 4.61
142 143 2.480419 GGAAGCCATTCGATTATCGGTG 59.520 50.000 14.86 13.04 40.88 4.94
143 144 2.368875 AGGAAGCCATTCGATTATCGGT 59.631 45.455 14.86 1.31 40.88 4.69
144 145 3.045601 AGGAAGCCATTCGATTATCGG 57.954 47.619 14.86 0.00 40.88 4.18
145 146 6.158175 CTTAAGGAAGCCATTCGATTATCG 57.842 41.667 8.47 8.47 42.10 2.92
176 177 9.767228 TGTTACTTGCTGAAATGTACTTAAGTA 57.233 29.630 11.38 11.38 0.00 2.24
177 178 8.671384 TGTTACTTGCTGAAATGTACTTAAGT 57.329 30.769 13.68 13.68 0.00 2.24
181 182 8.082242 GGAATTGTTACTTGCTGAAATGTACTT 58.918 33.333 0.00 0.00 0.00 2.24
182 183 7.230510 TGGAATTGTTACTTGCTGAAATGTACT 59.769 33.333 0.00 0.00 0.00 2.73
183 184 7.367285 TGGAATTGTTACTTGCTGAAATGTAC 58.633 34.615 0.00 0.00 0.00 2.90
184 185 7.517614 TGGAATTGTTACTTGCTGAAATGTA 57.482 32.000 0.00 0.00 0.00 2.29
185 186 6.403866 TGGAATTGTTACTTGCTGAAATGT 57.596 33.333 0.00 0.00 0.00 2.71
186 187 7.092079 TCATGGAATTGTTACTTGCTGAAATG 58.908 34.615 0.00 0.00 0.00 2.32
187 188 7.230849 TCATGGAATTGTTACTTGCTGAAAT 57.769 32.000 0.00 0.00 0.00 2.17
188 189 6.647334 TCATGGAATTGTTACTTGCTGAAA 57.353 33.333 0.00 0.00 0.00 2.69
189 190 6.839124 ATCATGGAATTGTTACTTGCTGAA 57.161 33.333 0.00 0.00 0.00 3.02
190 191 7.936496 TTATCATGGAATTGTTACTTGCTGA 57.064 32.000 0.00 0.00 0.00 4.26
191 192 8.028354 TGTTTATCATGGAATTGTTACTTGCTG 58.972 33.333 0.00 0.00 0.00 4.41
192 193 8.121305 TGTTTATCATGGAATTGTTACTTGCT 57.879 30.769 0.00 0.00 0.00 3.91
193 194 8.931385 ATGTTTATCATGGAATTGTTACTTGC 57.069 30.769 0.00 0.00 35.19 4.01
283 284 9.806203 CTGCAACTATATTCAAATGATTTGGAA 57.194 29.630 17.01 10.62 40.98 3.53
284 285 8.415553 CCTGCAACTATATTCAAATGATTTGGA 58.584 33.333 17.01 9.73 40.98 3.53
285 286 8.415553 TCCTGCAACTATATTCAAATGATTTGG 58.584 33.333 17.01 3.46 40.98 3.28
286 287 9.241317 GTCCTGCAACTATATTCAAATGATTTG 57.759 33.333 11.54 11.54 41.96 2.32
287 288 8.970020 TGTCCTGCAACTATATTCAAATGATTT 58.030 29.630 0.00 0.00 0.00 2.17
288 289 8.408601 GTGTCCTGCAACTATATTCAAATGATT 58.591 33.333 0.00 0.00 0.00 2.57
289 290 7.557358 TGTGTCCTGCAACTATATTCAAATGAT 59.443 33.333 0.00 0.00 0.00 2.45
290 291 6.883756 TGTGTCCTGCAACTATATTCAAATGA 59.116 34.615 0.00 0.00 0.00 2.57
291 292 7.087409 TGTGTCCTGCAACTATATTCAAATG 57.913 36.000 0.00 0.00 0.00 2.32
292 293 7.886629 ATGTGTCCTGCAACTATATTCAAAT 57.113 32.000 0.00 0.00 0.00 2.32
293 294 8.800370 TTATGTGTCCTGCAACTATATTCAAA 57.200 30.769 0.00 0.00 0.00 2.69
294 295 8.978874 ATTATGTGTCCTGCAACTATATTCAA 57.021 30.769 0.00 0.00 0.00 2.69
295 296 8.978874 AATTATGTGTCCTGCAACTATATTCA 57.021 30.769 0.00 0.00 0.00 2.57
296 297 8.507249 GGAATTATGTGTCCTGCAACTATATTC 58.493 37.037 0.00 0.00 0.00 1.75
297 298 7.998383 TGGAATTATGTGTCCTGCAACTATATT 59.002 33.333 0.00 0.00 34.77 1.28
298 299 7.517320 TGGAATTATGTGTCCTGCAACTATAT 58.483 34.615 0.00 0.00 34.77 0.86
299 300 6.894682 TGGAATTATGTGTCCTGCAACTATA 58.105 36.000 0.00 0.00 34.77 1.31
300 301 5.754782 TGGAATTATGTGTCCTGCAACTAT 58.245 37.500 0.00 0.00 34.77 2.12
301 302 5.172687 TGGAATTATGTGTCCTGCAACTA 57.827 39.130 0.00 0.00 34.77 2.24
302 303 4.032960 TGGAATTATGTGTCCTGCAACT 57.967 40.909 0.00 0.00 34.77 3.16
303 304 4.022416 TGTTGGAATTATGTGTCCTGCAAC 60.022 41.667 0.00 0.00 34.77 4.17
304 305 4.148079 TGTTGGAATTATGTGTCCTGCAA 58.852 39.130 0.00 0.00 34.77 4.08
305 306 3.760738 TGTTGGAATTATGTGTCCTGCA 58.239 40.909 0.00 0.00 34.77 4.41
306 307 4.782019 TTGTTGGAATTATGTGTCCTGC 57.218 40.909 0.00 0.00 34.77 4.85
307 308 6.271488 ACATTGTTGGAATTATGTGTCCTG 57.729 37.500 0.00 0.00 34.77 3.86
308 309 6.916360 AACATTGTTGGAATTATGTGTCCT 57.084 33.333 0.15 0.00 34.77 3.85
309 310 6.128580 GCAAACATTGTTGGAATTATGTGTCC 60.129 38.462 8.14 0.00 31.98 4.02
310 311 6.646240 AGCAAACATTGTTGGAATTATGTGTC 59.354 34.615 8.14 0.00 31.98 3.67
311 312 6.523840 AGCAAACATTGTTGGAATTATGTGT 58.476 32.000 8.14 0.00 31.98 3.72
312 313 7.814107 ACTAGCAAACATTGTTGGAATTATGTG 59.186 33.333 8.14 0.00 31.98 3.21
313 314 7.895759 ACTAGCAAACATTGTTGGAATTATGT 58.104 30.769 8.14 0.00 32.89 2.29
314 315 9.507280 CTACTAGCAAACATTGTTGGAATTATG 57.493 33.333 8.14 0.00 0.00 1.90
315 316 9.243105 ACTACTAGCAAACATTGTTGGAATTAT 57.757 29.630 8.14 0.00 0.00 1.28
316 317 8.511321 CACTACTAGCAAACATTGTTGGAATTA 58.489 33.333 8.14 0.00 0.00 1.40
317 318 7.230510 TCACTACTAGCAAACATTGTTGGAATT 59.769 33.333 8.14 0.00 0.00 2.17
318 319 6.714810 TCACTACTAGCAAACATTGTTGGAAT 59.285 34.615 8.14 0.00 0.00 3.01
319 320 6.017440 GTCACTACTAGCAAACATTGTTGGAA 60.017 38.462 8.14 0.00 0.00 3.53
320 321 5.468746 GTCACTACTAGCAAACATTGTTGGA 59.531 40.000 8.14 0.00 0.00 3.53
321 322 5.334879 GGTCACTACTAGCAAACATTGTTGG 60.335 44.000 2.13 0.54 0.00 3.77
322 323 5.470098 AGGTCACTACTAGCAAACATTGTTG 59.530 40.000 2.13 0.00 0.00 3.33
323 324 5.621193 AGGTCACTACTAGCAAACATTGTT 58.379 37.500 0.00 0.00 0.00 2.83
324 325 5.228945 AGGTCACTACTAGCAAACATTGT 57.771 39.130 0.00 0.00 0.00 2.71
325 326 7.667043 TTTAGGTCACTACTAGCAAACATTG 57.333 36.000 0.00 0.00 0.00 2.82
326 327 7.148239 GCATTTAGGTCACTACTAGCAAACATT 60.148 37.037 0.00 0.00 0.00 2.71
327 328 6.316390 GCATTTAGGTCACTACTAGCAAACAT 59.684 38.462 0.00 0.00 0.00 2.71
328 329 5.642063 GCATTTAGGTCACTACTAGCAAACA 59.358 40.000 0.00 0.00 0.00 2.83
329 330 5.875359 AGCATTTAGGTCACTACTAGCAAAC 59.125 40.000 0.00 0.00 0.00 2.93
330 331 6.049955 AGCATTTAGGTCACTACTAGCAAA 57.950 37.500 0.00 0.00 0.00 3.68
331 332 5.661458 GAGCATTTAGGTCACTACTAGCAA 58.339 41.667 0.00 0.00 44.14 3.91
332 333 5.263968 GAGCATTTAGGTCACTACTAGCA 57.736 43.478 0.00 0.00 44.14 3.49
342 343 6.814146 CCTCCGAATATAAGAGCATTTAGGTC 59.186 42.308 0.00 0.00 45.07 3.85
343 344 6.295916 CCCTCCGAATATAAGAGCATTTAGGT 60.296 42.308 0.00 0.00 0.00 3.08
344 345 6.070767 TCCCTCCGAATATAAGAGCATTTAGG 60.071 42.308 0.00 0.00 0.00 2.69
345 346 6.936279 TCCCTCCGAATATAAGAGCATTTAG 58.064 40.000 0.00 0.00 0.00 1.85
346 347 6.497259 ACTCCCTCCGAATATAAGAGCATTTA 59.503 38.462 0.00 0.00 0.00 1.40
347 348 5.308237 ACTCCCTCCGAATATAAGAGCATTT 59.692 40.000 0.00 0.00 0.00 2.32
348 349 4.841246 ACTCCCTCCGAATATAAGAGCATT 59.159 41.667 0.00 0.00 0.00 3.56
349 350 4.421131 ACTCCCTCCGAATATAAGAGCAT 58.579 43.478 0.00 0.00 0.00 3.79
350 351 3.845860 ACTCCCTCCGAATATAAGAGCA 58.154 45.455 0.00 0.00 0.00 4.26
351 352 6.532988 AATACTCCCTCCGAATATAAGAGC 57.467 41.667 0.00 0.00 0.00 4.09
401 402 3.589735 AGACCCATTACCATGTACCAACA 59.410 43.478 0.00 0.00 40.69 3.33
475 478 1.211949 ACATTTCATGGGTAGGGTCCG 59.788 52.381 0.00 0.00 33.60 4.79
1174 1177 8.634475 TCTCAATGATCACGATTACAAACTAG 57.366 34.615 0.00 0.00 0.00 2.57
1292 1303 1.834188 AAACCTAATCCCAACTGCGG 58.166 50.000 0.00 0.00 0.00 5.69
1497 1509 6.978659 TCTCGCTTACATTCACCTTAATACTG 59.021 38.462 0.00 0.00 0.00 2.74
1575 1676 2.808543 CACTACAAGCCAGTCTGGTTTC 59.191 50.000 17.40 2.52 39.00 2.78
1609 1710 2.988010 AGATCAAGATAACGGCAGCA 57.012 45.000 0.00 0.00 0.00 4.41
1623 1724 0.523519 CCGCTAGCGCTGATAGATCA 59.476 55.000 31.35 0.00 38.24 2.92
1625 1726 1.822506 TACCGCTAGCGCTGATAGAT 58.177 50.000 31.35 10.45 38.24 1.98
1660 1761 2.558359 AGATAGTTTGCTGGTTTGCACC 59.442 45.455 0.00 0.00 43.20 5.01
1876 1977 8.062065 TCAAGCTGGAAGAAAGAAAAGTAAAA 57.938 30.769 0.00 0.00 34.07 1.52
1947 2048 3.663025 AGCTCTGTCTCTCTTCTTTTGC 58.337 45.455 0.00 0.00 0.00 3.68
2064 2165 7.678947 ATTCATTAGGAGCCAGAATTTATCG 57.321 36.000 0.00 0.00 0.00 2.92
2069 2170 4.957954 TGCAATTCATTAGGAGCCAGAATT 59.042 37.500 0.00 0.00 38.91 2.17
2175 2276 9.736023 AAACAGAAAACAGACTGTCAAATTATC 57.264 29.630 8.93 1.54 44.94 1.75
2201 2302 2.346766 TCTGCCAGCTTCAACAAGAA 57.653 45.000 0.00 0.00 34.41 2.52
2424 2525 6.778821 TCAAATAAGATGGAAGAACCTCACA 58.221 36.000 0.00 0.00 39.86 3.58
2491 2592 4.175516 CGAGGTGCCACTTTACGTATTAA 58.824 43.478 0.00 0.00 0.00 1.40
2493 2594 2.613691 CGAGGTGCCACTTTACGTATT 58.386 47.619 0.00 0.00 0.00 1.89
2538 2639 6.762661 TGGTTTAACTAGTTCCACACAAGTAC 59.237 38.462 12.39 0.00 0.00 2.73
2544 2645 6.707161 TGTACATGGTTTAACTAGTTCCACAC 59.293 38.462 12.39 12.12 0.00 3.82
2559 2660 7.067372 CACATAGACCAAATGATGTACATGGTT 59.933 37.037 14.43 4.80 40.61 3.67
2562 2663 7.790823 TCACATAGACCAAATGATGTACATG 57.209 36.000 14.43 0.00 39.39 3.21
2648 2753 5.181690 TGTTCATGTTTAAGTTGCAGACC 57.818 39.130 0.00 0.00 0.00 3.85
2679 2784 9.890629 AGTCACAATTTCAGAAGCATTATACTA 57.109 29.630 0.00 0.00 0.00 1.82
2685 2790 9.013229 TGTATAAGTCACAATTTCAGAAGCATT 57.987 29.630 0.00 0.00 0.00 3.56
2799 2989 5.901413 AGGGAGCTCATCAAAATCAGATA 57.099 39.130 17.19 0.00 0.00 1.98
2870 3060 4.451629 TGGTAAGATCACGAGAAGGAAC 57.548 45.455 0.00 0.00 0.00 3.62
2900 3090 1.349542 TGGCGTTGGGGGCATATACT 61.350 55.000 0.00 0.00 37.59 2.12
2915 3105 0.887933 AAAGGTTACAGGCATTGGCG 59.112 50.000 4.38 2.83 42.47 5.69
2937 3127 6.121590 TCAATATCAGTTGATAAGCAAGGCA 58.878 36.000 5.97 0.00 40.09 4.75
2938 3128 6.624352 TCAATATCAGTTGATAAGCAAGGC 57.376 37.500 5.97 0.00 40.09 4.35
2939 3129 7.594015 GCAATCAATATCAGTTGATAAGCAAGG 59.406 37.037 15.76 0.00 45.49 3.61
2940 3130 8.132995 TGCAATCAATATCAGTTGATAAGCAAG 58.867 33.333 18.71 0.00 45.83 4.01
3033 3223 1.490490 ACCTCAGCTTCCAAGTTGTCA 59.510 47.619 1.45 0.00 38.27 3.58
3106 3296 7.068348 AGCTCAGAACTCGGAGTTTATTATGTA 59.932 37.037 23.17 4.67 38.80 2.29
3111 3301 4.810191 AGCTCAGAACTCGGAGTTTATT 57.190 40.909 23.17 10.49 38.80 1.40
3119 3309 5.171476 TCTTCATTTAAGCTCAGAACTCGG 58.829 41.667 0.00 0.00 34.97 4.63
3120 3310 6.900568 ATCTTCATTTAAGCTCAGAACTCG 57.099 37.500 0.00 0.00 34.97 4.18
3162 3353 5.846473 GCTGAAAAGAACAGACGACAATAAC 59.154 40.000 0.00 0.00 37.54 1.89
3171 3362 3.065925 AGTGCAAGCTGAAAAGAACAGAC 59.934 43.478 0.00 0.00 37.54 3.51
3206 3397 1.135083 ACTTCAGTAACGGGAGCATCG 60.135 52.381 0.00 0.00 34.37 3.84
3231 3422 4.676723 CGGTGCTTTGGTTTTCTTTTCAGA 60.677 41.667 0.00 0.00 0.00 3.27
3297 3488 6.630638 GCTTTAGTAGGTACATCAGGAAGCTT 60.631 42.308 0.00 0.00 34.54 3.74
3378 3569 7.589958 TGAAACAGGCTAAACTCCAAAAATA 57.410 32.000 0.00 0.00 0.00 1.40
3416 3607 8.044060 ACACATCATCAGTACACCATAAAAAG 57.956 34.615 0.00 0.00 0.00 2.27
3430 3621 6.148976 ACTGTCAATTCAGAACACATCATCAG 59.851 38.462 1.40 0.00 38.63 2.90
3443 3634 4.153835 GCTCTTCCAAGACTGTCAATTCAG 59.846 45.833 10.88 0.71 40.80 3.02
3744 3935 3.545703 ACAACAGGGATATGCTTGTAGC 58.454 45.455 12.34 0.00 42.82 3.58
3745 3936 5.028549 AGACAACAGGGATATGCTTGTAG 57.971 43.478 12.34 0.00 30.14 2.74
3746 3937 4.141711 GGAGACAACAGGGATATGCTTGTA 60.142 45.833 12.34 0.00 30.14 2.41
3747 3938 3.370953 GGAGACAACAGGGATATGCTTGT 60.371 47.826 6.14 6.14 31.57 3.16
3748 3939 3.118112 AGGAGACAACAGGGATATGCTTG 60.118 47.826 4.73 4.73 0.00 4.01
3749 3940 3.118531 AGGAGACAACAGGGATATGCTT 58.881 45.455 0.00 0.00 0.00 3.91
3750 3941 2.703007 GAGGAGACAACAGGGATATGCT 59.297 50.000 0.00 0.00 0.00 3.79
3751 3942 2.703007 AGAGGAGACAACAGGGATATGC 59.297 50.000 0.00 0.00 0.00 3.14
3752 3943 3.070734 CCAGAGGAGACAACAGGGATATG 59.929 52.174 0.00 0.00 0.00 1.78
3753 3944 3.051803 TCCAGAGGAGACAACAGGGATAT 60.052 47.826 0.00 0.00 0.00 1.63
3754 3945 2.314852 TCCAGAGGAGACAACAGGGATA 59.685 50.000 0.00 0.00 0.00 2.59
3755 3946 1.079490 TCCAGAGGAGACAACAGGGAT 59.921 52.381 0.00 0.00 0.00 3.85
3756 3947 0.487325 TCCAGAGGAGACAACAGGGA 59.513 55.000 0.00 0.00 0.00 4.20
3757 3948 0.610687 GTCCAGAGGAGACAACAGGG 59.389 60.000 0.00 0.00 34.27 4.45
3758 3949 1.274728 CTGTCCAGAGGAGACAACAGG 59.725 57.143 0.00 0.00 43.36 4.00
3759 3950 1.337635 GCTGTCCAGAGGAGACAACAG 60.338 57.143 0.00 0.00 43.36 3.16
3760 3951 0.681733 GCTGTCCAGAGGAGACAACA 59.318 55.000 0.00 0.00 43.36 3.33
3761 3952 0.972883 AGCTGTCCAGAGGAGACAAC 59.027 55.000 0.00 0.00 43.36 3.32
3762 3953 2.604912 TAGCTGTCCAGAGGAGACAA 57.395 50.000 0.00 0.00 43.36 3.18
3763 3954 2.604912 TTAGCTGTCCAGAGGAGACA 57.395 50.000 0.00 0.00 41.84 3.41
3764 3955 3.963428 TTTTAGCTGTCCAGAGGAGAC 57.037 47.619 0.00 0.00 29.39 3.36
3765 3956 6.620877 TTAATTTTAGCTGTCCAGAGGAGA 57.379 37.500 0.00 0.00 29.39 3.71
3766 3957 7.872113 ATTTAATTTTAGCTGTCCAGAGGAG 57.128 36.000 0.00 0.00 29.39 3.69
3767 3958 7.669722 ACAATTTAATTTTAGCTGTCCAGAGGA 59.330 33.333 0.00 0.00 0.00 3.71
3768 3959 7.756722 CACAATTTAATTTTAGCTGTCCAGAGG 59.243 37.037 0.00 0.00 0.00 3.69
3769 3960 8.299570 ACACAATTTAATTTTAGCTGTCCAGAG 58.700 33.333 0.00 0.00 0.00 3.35
3770 3961 8.177119 ACACAATTTAATTTTAGCTGTCCAGA 57.823 30.769 0.00 0.00 0.00 3.86
3771 3962 8.816640 AACACAATTTAATTTTAGCTGTCCAG 57.183 30.769 0.00 0.00 0.00 3.86
3793 3984 6.597562 ACAGAATCCCAGTTAACAGTTAACA 58.402 36.000 29.64 15.04 46.11 2.41
3794 3985 7.506328 AACAGAATCCCAGTTAACAGTTAAC 57.494 36.000 23.58 23.58 44.49 2.01
3795 3986 7.776030 TGAAACAGAATCCCAGTTAACAGTTAA 59.224 33.333 8.61 1.26 0.00 2.01
3796 3987 7.284074 TGAAACAGAATCCCAGTTAACAGTTA 58.716 34.615 8.61 0.00 0.00 2.24
3797 3988 6.126409 TGAAACAGAATCCCAGTTAACAGTT 58.874 36.000 8.61 0.00 0.00 3.16
3798 3989 5.690865 TGAAACAGAATCCCAGTTAACAGT 58.309 37.500 8.61 0.00 0.00 3.55
3799 3990 6.824305 ATGAAACAGAATCCCAGTTAACAG 57.176 37.500 8.61 0.00 0.00 3.16
3810 4001 6.521151 AGATCCAACCAATGAAACAGAATC 57.479 37.500 0.00 0.00 0.00 2.52
3837 4028 1.202592 TGCAAAGTAGCCAAGTCGTGA 60.203 47.619 0.00 0.00 0.00 4.35
3838 4029 1.069906 GTGCAAAGTAGCCAAGTCGTG 60.070 52.381 0.00 0.00 0.00 4.35
3887 4078 6.552629 CAGGTGTCAAATCAGAAATGATGAG 58.447 40.000 0.00 0.00 0.00 2.90
3956 4147 5.110814 AGCCCAGCAACTACATAAATGTA 57.889 39.130 2.98 2.98 41.97 2.29
3957 4148 3.947834 GAGCCCAGCAACTACATAAATGT 59.052 43.478 0.63 0.63 44.48 2.71
3977 4168 0.742281 AGCAGCGGCAACATACTGAG 60.742 55.000 12.44 0.00 44.61 3.35
4027 4218 6.449698 CATTTTAACAGCAAAGATCACCAGT 58.550 36.000 0.00 0.00 0.00 4.00
4028 4219 5.865552 CCATTTTAACAGCAAAGATCACCAG 59.134 40.000 0.00 0.00 0.00 4.00
4031 4222 6.583806 CAGACCATTTTAACAGCAAAGATCAC 59.416 38.462 0.00 0.00 0.00 3.06
4033 4224 6.681777 ACAGACCATTTTAACAGCAAAGATC 58.318 36.000 0.00 0.00 0.00 2.75
4034 4225 6.655078 ACAGACCATTTTAACAGCAAAGAT 57.345 33.333 0.00 0.00 0.00 2.40
4035 4226 6.096141 TCAACAGACCATTTTAACAGCAAAGA 59.904 34.615 0.00 0.00 0.00 2.52
4036 4227 6.272318 TCAACAGACCATTTTAACAGCAAAG 58.728 36.000 0.00 0.00 0.00 2.77
4037 4228 6.096141 TCTCAACAGACCATTTTAACAGCAAA 59.904 34.615 0.00 0.00 0.00 3.68
4067 4258 1.451651 GAATGCAACCGTTTTTCAGCG 59.548 47.619 0.00 0.00 0.00 5.18
4108 4299 6.241207 ACACAGTACTTGTTATTGACATGC 57.759 37.500 0.00 0.00 38.16 4.06
4165 4358 8.669243 GCATTCCTTATATAAACTCTGGCATAC 58.331 37.037 0.00 0.00 0.00 2.39
4176 4369 8.426489 ACGGTACTTGAGCATTCCTTATATAAA 58.574 33.333 0.00 0.00 0.00 1.40
4213 4408 6.857964 GCCACATCCATTCTACAAAATAATCG 59.142 38.462 0.00 0.00 0.00 3.34
4219 4414 4.218200 CAGTGCCACATCCATTCTACAAAA 59.782 41.667 0.00 0.00 0.00 2.44
4223 4418 3.266510 TCAGTGCCACATCCATTCTAC 57.733 47.619 0.00 0.00 0.00 2.59
4244 4439 6.873605 GGTTAAAATAGCATGCTGAAAACCTT 59.126 34.615 30.42 14.52 31.97 3.50
4319 4514 1.539496 GGCACTTATCGGCGTCCAATA 60.539 52.381 6.85 0.00 0.00 1.90
4323 4518 2.171725 GTGGCACTTATCGGCGTCC 61.172 63.158 11.13 0.00 0.00 4.79
4324 4519 1.447140 TGTGGCACTTATCGGCGTC 60.447 57.895 19.83 0.00 0.00 5.19
4325 4520 1.740296 GTGTGGCACTTATCGGCGT 60.740 57.895 19.83 0.00 0.00 5.68
4326 4521 2.798501 CGTGTGGCACTTATCGGCG 61.799 63.158 19.83 0.00 31.34 6.46
4327 4522 1.740296 ACGTGTGGCACTTATCGGC 60.740 57.895 19.83 0.00 31.34 5.54
4328 4523 0.669318 ACACGTGTGGCACTTATCGG 60.669 55.000 22.71 13.07 34.19 4.18
4329 4524 0.438445 CACACGTGTGGCACTTATCG 59.562 55.000 35.65 18.40 42.10 2.92
4339 4534 0.882927 CCCTAACACCCACACGTGTG 60.883 60.000 36.13 36.13 46.19 3.82
4341 4536 0.320421 CTCCCTAACACCCACACGTG 60.320 60.000 15.48 15.48 39.75 4.49
4342 4537 0.761702 ACTCCCTAACACCCACACGT 60.762 55.000 0.00 0.00 0.00 4.49
4343 4538 0.037605 GACTCCCTAACACCCACACG 60.038 60.000 0.00 0.00 0.00 4.49
4344 4539 1.002087 CAGACTCCCTAACACCCACAC 59.998 57.143 0.00 0.00 0.00 3.82
4345 4540 1.348064 CAGACTCCCTAACACCCACA 58.652 55.000 0.00 0.00 0.00 4.17
4346 4541 0.036294 GCAGACTCCCTAACACCCAC 60.036 60.000 0.00 0.00 0.00 4.61
4347 4542 1.198759 GGCAGACTCCCTAACACCCA 61.199 60.000 0.00 0.00 0.00 4.51
4348 4543 1.602771 GGCAGACTCCCTAACACCC 59.397 63.158 0.00 0.00 0.00 4.61
4349 4544 1.198759 TGGGCAGACTCCCTAACACC 61.199 60.000 10.28 0.00 46.67 4.16
4350 4545 0.036294 GTGGGCAGACTCCCTAACAC 60.036 60.000 10.28 0.00 46.67 3.32
4351 4546 0.472925 TGTGGGCAGACTCCCTAACA 60.473 55.000 10.28 5.67 46.67 2.41
4352 4547 0.036294 GTGTGGGCAGACTCCCTAAC 60.036 60.000 10.28 5.99 46.67 2.34
4353 4548 0.472925 TGTGTGGGCAGACTCCCTAA 60.473 55.000 10.28 0.00 46.67 2.69
4354 4549 0.252696 ATGTGTGGGCAGACTCCCTA 60.253 55.000 10.28 0.00 46.67 3.53
4355 4550 1.136329 AATGTGTGGGCAGACTCCCT 61.136 55.000 10.28 0.00 46.67 4.20
4356 4551 0.251341 AAATGTGTGGGCAGACTCCC 60.251 55.000 3.67 3.67 46.73 4.30
4357 4552 1.270550 CAAAATGTGTGGGCAGACTCC 59.729 52.381 0.00 0.00 0.00 3.85
4358 4553 1.956477 ACAAAATGTGTGGGCAGACTC 59.044 47.619 0.00 0.00 39.72 3.36
4359 4554 2.071778 ACAAAATGTGTGGGCAGACT 57.928 45.000 0.00 0.00 39.72 3.24
4370 4565 8.730680 GTTCCTCTTATACATCACACAAAATGT 58.269 33.333 0.00 0.00 44.81 2.71
4371 4566 8.729756 TGTTCCTCTTATACATCACACAAAATG 58.270 33.333 0.00 0.00 0.00 2.32
4372 4567 8.862325 TGTTCCTCTTATACATCACACAAAAT 57.138 30.769 0.00 0.00 0.00 1.82
4373 4568 7.094805 GCTGTTCCTCTTATACATCACACAAAA 60.095 37.037 0.00 0.00 0.00 2.44
4374 4569 6.371548 GCTGTTCCTCTTATACATCACACAAA 59.628 38.462 0.00 0.00 0.00 2.83
4375 4570 5.874810 GCTGTTCCTCTTATACATCACACAA 59.125 40.000 0.00 0.00 0.00 3.33
4376 4571 5.419542 GCTGTTCCTCTTATACATCACACA 58.580 41.667 0.00 0.00 0.00 3.72
4377 4572 4.811557 GGCTGTTCCTCTTATACATCACAC 59.188 45.833 0.00 0.00 0.00 3.82
4378 4573 4.141711 GGGCTGTTCCTCTTATACATCACA 60.142 45.833 0.00 0.00 34.39 3.58
4379 4574 4.141711 TGGGCTGTTCCTCTTATACATCAC 60.142 45.833 0.00 0.00 34.39 3.06
4380 4575 4.037222 TGGGCTGTTCCTCTTATACATCA 58.963 43.478 0.00 0.00 34.39 3.07
4381 4576 4.141711 TGTGGGCTGTTCCTCTTATACATC 60.142 45.833 0.00 0.00 34.39 3.06
4382 4577 3.780294 TGTGGGCTGTTCCTCTTATACAT 59.220 43.478 0.00 0.00 34.39 2.29
4383 4578 3.055385 GTGTGGGCTGTTCCTCTTATACA 60.055 47.826 0.00 0.00 34.39 2.29
4384 4579 3.055385 TGTGTGGGCTGTTCCTCTTATAC 60.055 47.826 0.00 0.00 34.39 1.47
4385 4580 3.055385 GTGTGTGGGCTGTTCCTCTTATA 60.055 47.826 0.00 0.00 34.39 0.98
4386 4581 1.985159 TGTGTGGGCTGTTCCTCTTAT 59.015 47.619 0.00 0.00 34.39 1.73
4387 4582 1.071699 GTGTGTGGGCTGTTCCTCTTA 59.928 52.381 0.00 0.00 34.39 2.10
4388 4583 0.179018 GTGTGTGGGCTGTTCCTCTT 60.179 55.000 0.00 0.00 34.39 2.85
4389 4584 1.451936 GTGTGTGGGCTGTTCCTCT 59.548 57.895 0.00 0.00 34.39 3.69
4390 4585 1.600916 GGTGTGTGGGCTGTTCCTC 60.601 63.158 0.00 0.00 34.39 3.71
4391 4586 0.766674 TAGGTGTGTGGGCTGTTCCT 60.767 55.000 0.00 0.00 34.39 3.36
4392 4587 0.605589 GTAGGTGTGTGGGCTGTTCC 60.606 60.000 0.00 0.00 0.00 3.62
4393 4588 0.949105 CGTAGGTGTGTGGGCTGTTC 60.949 60.000 0.00 0.00 0.00 3.18
4394 4589 1.070786 CGTAGGTGTGTGGGCTGTT 59.929 57.895 0.00 0.00 0.00 3.16
4395 4590 2.138179 ACGTAGGTGTGTGGGCTGT 61.138 57.895 0.00 0.00 0.00 4.40
4396 4591 1.667830 CACGTAGGTGTGTGGGCTG 60.668 63.158 7.41 0.00 39.38 4.85
4397 4592 2.741092 CACGTAGGTGTGTGGGCT 59.259 61.111 7.41 0.00 39.38 5.19
4406 4601 0.107116 TGTTTTGCCCACACGTAGGT 60.107 50.000 5.59 0.00 0.00 3.08
4407 4602 1.001815 CTTGTTTTGCCCACACGTAGG 60.002 52.381 0.00 0.00 0.00 3.18
4408 4603 1.673920 ACTTGTTTTGCCCACACGTAG 59.326 47.619 0.00 0.00 0.00 3.51
4409 4604 1.752683 ACTTGTTTTGCCCACACGTA 58.247 45.000 0.00 0.00 0.00 3.57
4410 4605 1.752683 TACTTGTTTTGCCCACACGT 58.247 45.000 0.00 0.00 31.97 4.49
4411 4606 2.853731 TTACTTGTTTTGCCCACACG 57.146 45.000 0.00 0.00 0.00 4.49
4412 4607 4.048504 GACATTACTTGTTTTGCCCACAC 58.951 43.478 0.00 0.00 39.18 3.82
4413 4608 3.068873 GGACATTACTTGTTTTGCCCACA 59.931 43.478 0.00 0.00 39.18 4.17
4414 4609 3.068873 TGGACATTACTTGTTTTGCCCAC 59.931 43.478 0.00 0.00 39.18 4.61
4415 4610 3.068873 GTGGACATTACTTGTTTTGCCCA 59.931 43.478 0.00 0.00 39.18 5.36
4416 4611 3.068873 TGTGGACATTACTTGTTTTGCCC 59.931 43.478 0.00 0.00 39.18 5.36
4417 4612 4.048504 GTGTGGACATTACTTGTTTTGCC 58.951 43.478 0.00 0.00 39.18 4.52
4418 4613 4.677584 TGTGTGGACATTACTTGTTTTGC 58.322 39.130 0.00 0.00 39.18 3.68
4419 4614 6.738114 AGATGTGTGGACATTACTTGTTTTG 58.262 36.000 0.00 0.00 43.22 2.44
4420 4615 6.772716 AGAGATGTGTGGACATTACTTGTTTT 59.227 34.615 0.00 0.00 43.22 2.43
4421 4616 6.299141 AGAGATGTGTGGACATTACTTGTTT 58.701 36.000 0.00 0.00 43.22 2.83
4422 4617 5.869579 AGAGATGTGTGGACATTACTTGTT 58.130 37.500 0.00 0.00 43.22 2.83
4423 4618 5.489792 AGAGATGTGTGGACATTACTTGT 57.510 39.130 0.00 0.00 43.22 3.16
4424 4619 6.808008 AAAGAGATGTGTGGACATTACTTG 57.192 37.500 0.00 0.00 43.22 3.16
4425 4620 7.721399 AGAAAAAGAGATGTGTGGACATTACTT 59.279 33.333 0.00 0.00 43.22 2.24
4426 4621 7.227156 AGAAAAAGAGATGTGTGGACATTACT 58.773 34.615 0.00 0.00 43.22 2.24
4427 4622 7.440523 AGAAAAAGAGATGTGTGGACATTAC 57.559 36.000 0.00 0.00 43.22 1.89
4428 4623 7.939039 AGAAGAAAAAGAGATGTGTGGACATTA 59.061 33.333 0.00 0.00 43.22 1.90
4429 4624 6.774656 AGAAGAAAAAGAGATGTGTGGACATT 59.225 34.615 0.00 0.00 43.22 2.71
4430 4625 6.302269 AGAAGAAAAAGAGATGTGTGGACAT 58.698 36.000 0.00 0.00 46.01 3.06
4431 4626 5.684704 AGAAGAAAAAGAGATGTGTGGACA 58.315 37.500 0.00 0.00 36.22 4.02
4432 4627 5.180304 GGAGAAGAAAAAGAGATGTGTGGAC 59.820 44.000 0.00 0.00 0.00 4.02
4433 4628 5.308825 GGAGAAGAAAAAGAGATGTGTGGA 58.691 41.667 0.00 0.00 0.00 4.02
4434 4629 4.457257 GGGAGAAGAAAAAGAGATGTGTGG 59.543 45.833 0.00 0.00 0.00 4.17
4435 4630 4.153117 CGGGAGAAGAAAAAGAGATGTGTG 59.847 45.833 0.00 0.00 0.00 3.82
4436 4631 4.040461 TCGGGAGAAGAAAAAGAGATGTGT 59.960 41.667 0.00 0.00 34.75 3.72
4437 4632 4.569943 TCGGGAGAAGAAAAAGAGATGTG 58.430 43.478 0.00 0.00 34.75 3.21
4438 4633 4.891992 TCGGGAGAAGAAAAAGAGATGT 57.108 40.909 0.00 0.00 34.75 3.06
4439 4634 4.813697 GGATCGGGAGAAGAAAAAGAGATG 59.186 45.833 0.00 0.00 45.37 2.90
4440 4635 4.141597 GGGATCGGGAGAAGAAAAAGAGAT 60.142 45.833 0.00 0.00 45.37 2.75
4441 4636 3.197983 GGGATCGGGAGAAGAAAAAGAGA 59.802 47.826 0.00 0.00 45.37 3.10
4442 4637 3.198853 AGGGATCGGGAGAAGAAAAAGAG 59.801 47.826 0.00 0.00 45.37 2.85
4443 4638 3.182152 AGGGATCGGGAGAAGAAAAAGA 58.818 45.455 0.00 0.00 45.37 2.52
4444 4639 3.198853 AGAGGGATCGGGAGAAGAAAAAG 59.801 47.826 0.00 0.00 45.37 2.27
4445 4640 3.182152 AGAGGGATCGGGAGAAGAAAAA 58.818 45.455 0.00 0.00 45.37 1.94
4446 4641 2.766828 GAGAGGGATCGGGAGAAGAAAA 59.233 50.000 0.00 0.00 45.37 2.29
4447 4642 2.292257 TGAGAGGGATCGGGAGAAGAAA 60.292 50.000 0.00 0.00 45.37 2.52
4448 4643 1.288037 TGAGAGGGATCGGGAGAAGAA 59.712 52.381 0.00 0.00 45.37 2.52
4449 4644 0.927029 TGAGAGGGATCGGGAGAAGA 59.073 55.000 0.00 0.00 45.37 2.87
4450 4645 1.036707 GTGAGAGGGATCGGGAGAAG 58.963 60.000 0.00 0.00 45.37 2.85
4451 4646 0.335019 TGTGAGAGGGATCGGGAGAA 59.665 55.000 0.00 0.00 45.37 2.87
4452 4647 0.395862 GTGTGAGAGGGATCGGGAGA 60.396 60.000 0.00 0.00 46.90 3.71
4453 4648 1.729470 CGTGTGAGAGGGATCGGGAG 61.729 65.000 0.00 0.00 0.00 4.30
4454 4649 1.753078 CGTGTGAGAGGGATCGGGA 60.753 63.158 0.00 0.00 0.00 5.14
4455 4650 2.808315 CGTGTGAGAGGGATCGGG 59.192 66.667 0.00 0.00 0.00 5.14
4456 4651 2.105128 GCGTGTGAGAGGGATCGG 59.895 66.667 0.00 0.00 0.00 4.18
4457 4652 2.278206 CGCGTGTGAGAGGGATCG 60.278 66.667 0.00 0.00 0.00 3.69
4458 4653 2.885861 ACGCGTGTGAGAGGGATC 59.114 61.111 12.93 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.