Multiple sequence alignment - TraesCS6A01G205600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G205600 chr6A 100.000 2555 0 0 1 2555 359040286 359037732 0.000000e+00 4719.0
1 TraesCS6A01G205600 chr6A 97.255 1093 25 3 1464 2555 359031345 359030257 0.000000e+00 1847.0
2 TraesCS6A01G205600 chr6A 95.434 1095 41 6 1465 2555 157916198 157917287 0.000000e+00 1736.0
3 TraesCS6A01G205600 chr3A 95.208 1106 45 7 1456 2555 525303594 525304697 0.000000e+00 1742.0
4 TraesCS6A01G205600 chr2A 95.438 1096 38 8 1464 2555 283206731 283207818 0.000000e+00 1736.0
5 TraesCS6A01G205600 chr2A 95.347 1096 41 9 1465 2555 267873310 267872220 0.000000e+00 1733.0
6 TraesCS6A01G205600 chr2A 95.104 1103 42 7 1458 2555 488649908 488651003 0.000000e+00 1727.0
7 TraesCS6A01G205600 chr2A 94.815 135 7 0 262 396 98897413 98897547 7.160000e-51 211.0
8 TraesCS6A01G205600 chr1A 95.438 1096 39 10 1465 2555 107587663 107588752 0.000000e+00 1736.0
9 TraesCS6A01G205600 chr1A 95.182 1100 42 11 1464 2555 107857491 107856395 0.000000e+00 1727.0
10 TraesCS6A01G205600 chr1A 90.604 149 13 1 251 399 250488490 250488343 2.010000e-46 196.0
11 TraesCS6A01G205600 chr5A 95.177 1099 45 8 1464 2555 554656641 554655544 0.000000e+00 1729.0
12 TraesCS6A01G205600 chr2B 96.259 695 24 2 772 1464 741369241 741368547 0.000000e+00 1138.0
13 TraesCS6A01G205600 chr4A 96.115 695 24 3 771 1464 706584664 706585356 0.000000e+00 1131.0
14 TraesCS6A01G205600 chr3B 95.108 695 31 3 771 1464 365288170 365287478 0.000000e+00 1092.0
15 TraesCS6A01G205600 chr6B 93.286 283 14 3 464 741 404385762 404385480 1.830000e-111 412.0
16 TraesCS6A01G205600 chr6B 84.507 71 11 0 670 740 476118636 476118566 1.270000e-08 71.3
17 TraesCS6A01G205600 chr7D 94.245 139 6 2 261 399 182613643 182613507 7.160000e-51 211.0
18 TraesCS6A01G205600 chr7D 94.161 137 7 1 263 399 580887678 580887543 9.260000e-50 207.0
19 TraesCS6A01G205600 chr3D 94.203 138 8 0 262 399 556024175 556024038 7.160000e-51 211.0
20 TraesCS6A01G205600 chr6D 89.349 169 14 4 576 741 263461310 263461143 2.580000e-50 209.0
21 TraesCS6A01G205600 chr6D 94.203 138 7 1 262 399 467149845 467149981 2.580000e-50 209.0
22 TraesCS6A01G205600 chr6D 95.536 112 5 0 464 575 263461805 263461694 2.020000e-41 180.0
23 TraesCS6A01G205600 chr6D 85.714 105 9 6 10 112 263461900 263461800 3.480000e-19 106.0
24 TraesCS6A01G205600 chr5D 93.478 138 8 1 262 399 552044763 552044627 1.200000e-48 204.0
25 TraesCS6A01G205600 chrUn 91.333 150 10 3 250 399 51420762 51420616 4.310000e-48 202.0
26 TraesCS6A01G205600 chr7B 92.754 138 9 1 263 400 56455603 56455467 5.580000e-47 198.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G205600 chr6A 359037732 359040286 2554 True 4719 4719 100.000 1 2555 1 chr6A.!!$R2 2554
1 TraesCS6A01G205600 chr6A 359030257 359031345 1088 True 1847 1847 97.255 1464 2555 1 chr6A.!!$R1 1091
2 TraesCS6A01G205600 chr6A 157916198 157917287 1089 False 1736 1736 95.434 1465 2555 1 chr6A.!!$F1 1090
3 TraesCS6A01G205600 chr3A 525303594 525304697 1103 False 1742 1742 95.208 1456 2555 1 chr3A.!!$F1 1099
4 TraesCS6A01G205600 chr2A 283206731 283207818 1087 False 1736 1736 95.438 1464 2555 1 chr2A.!!$F2 1091
5 TraesCS6A01G205600 chr2A 267872220 267873310 1090 True 1733 1733 95.347 1465 2555 1 chr2A.!!$R1 1090
6 TraesCS6A01G205600 chr2A 488649908 488651003 1095 False 1727 1727 95.104 1458 2555 1 chr2A.!!$F3 1097
7 TraesCS6A01G205600 chr1A 107587663 107588752 1089 False 1736 1736 95.438 1465 2555 1 chr1A.!!$F1 1090
8 TraesCS6A01G205600 chr1A 107856395 107857491 1096 True 1727 1727 95.182 1464 2555 1 chr1A.!!$R1 1091
9 TraesCS6A01G205600 chr5A 554655544 554656641 1097 True 1729 1729 95.177 1464 2555 1 chr5A.!!$R1 1091
10 TraesCS6A01G205600 chr2B 741368547 741369241 694 True 1138 1138 96.259 772 1464 1 chr2B.!!$R1 692
11 TraesCS6A01G205600 chr4A 706584664 706585356 692 False 1131 1131 96.115 771 1464 1 chr4A.!!$F1 693
12 TraesCS6A01G205600 chr3B 365287478 365288170 692 True 1092 1092 95.108 771 1464 1 chr3B.!!$R1 693

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
597 598 0.117943 TCCCATGGCCCCAATTTGAA 59.882 50.0 6.09 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2503 2525 0.668706 CGCTCCTCTGAGTGTTGGTG 60.669 60.0 3.66 0.0 42.87 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 9.950496 TTTTCCAAAATAAATAAATAGCCAGCA 57.050 25.926 0.00 0.00 0.00 4.41
61 62 9.545105 TTCCAAAATAAATAAATAGCCAGCATG 57.455 29.630 0.00 0.00 0.00 4.06
62 63 8.703743 TCCAAAATAAATAAATAGCCAGCATGT 58.296 29.630 0.00 0.00 0.00 3.21
63 64 9.328845 CCAAAATAAATAAATAGCCAGCATGTT 57.671 29.630 0.00 0.00 0.00 2.71
90 91 8.610248 TTTTATTGAGTTGGAAATAGACGACA 57.390 30.769 0.00 0.00 0.00 4.35
91 92 8.786826 TTTATTGAGTTGGAAATAGACGACAT 57.213 30.769 0.00 0.00 0.00 3.06
92 93 6.668541 ATTGAGTTGGAAATAGACGACATG 57.331 37.500 0.00 0.00 0.00 3.21
93 94 5.147330 TGAGTTGGAAATAGACGACATGT 57.853 39.130 0.00 0.00 0.00 3.21
94 95 6.275494 TGAGTTGGAAATAGACGACATGTA 57.725 37.500 0.00 0.00 0.00 2.29
95 96 6.873997 TGAGTTGGAAATAGACGACATGTAT 58.126 36.000 0.00 0.00 0.00 2.29
96 97 8.002984 TGAGTTGGAAATAGACGACATGTATA 57.997 34.615 0.00 0.00 0.00 1.47
97 98 7.919091 TGAGTTGGAAATAGACGACATGTATAC 59.081 37.037 0.00 0.00 0.00 1.47
98 99 8.008513 AGTTGGAAATAGACGACATGTATACT 57.991 34.615 0.00 0.72 0.00 2.12
99 100 8.136165 AGTTGGAAATAGACGACATGTATACTC 58.864 37.037 0.00 0.00 0.00 2.59
100 101 6.978338 TGGAAATAGACGACATGTATACTCC 58.022 40.000 0.00 0.00 33.32 3.85
101 102 6.015688 TGGAAATAGACGACATGTATACTCCC 60.016 42.308 0.00 0.00 32.40 4.30
102 103 6.015688 GGAAATAGACGACATGTATACTCCCA 60.016 42.308 0.00 0.00 29.37 4.37
103 104 7.309867 GGAAATAGACGACATGTATACTCCCAT 60.310 40.741 0.00 0.00 29.37 4.00
104 105 8.645814 AAATAGACGACATGTATACTCCCATA 57.354 34.615 0.00 0.00 0.00 2.74
105 106 5.961396 AGACGACATGTATACTCCCATAC 57.039 43.478 0.00 0.00 32.91 2.39
106 107 5.632118 AGACGACATGTATACTCCCATACT 58.368 41.667 0.00 0.00 33.37 2.12
107 108 5.706369 AGACGACATGTATACTCCCATACTC 59.294 44.000 0.00 0.00 33.37 2.59
108 109 4.765856 ACGACATGTATACTCCCATACTCC 59.234 45.833 0.00 0.00 33.37 3.85
109 110 4.158025 CGACATGTATACTCCCATACTCCC 59.842 50.000 0.00 0.00 33.37 4.30
110 111 5.334421 GACATGTATACTCCCATACTCCCT 58.666 45.833 0.00 0.00 33.37 4.20
111 112 5.334421 ACATGTATACTCCCATACTCCCTC 58.666 45.833 0.00 0.00 33.37 4.30
112 113 4.399483 TGTATACTCCCATACTCCCTCC 57.601 50.000 4.17 0.00 33.37 4.30
113 114 2.606751 ATACTCCCATACTCCCTCCG 57.393 55.000 0.00 0.00 0.00 4.63
114 115 0.481567 TACTCCCATACTCCCTCCGG 59.518 60.000 0.00 0.00 0.00 5.14
115 116 1.233369 CTCCCATACTCCCTCCGGT 59.767 63.158 0.00 0.00 0.00 5.28
116 117 0.828343 CTCCCATACTCCCTCCGGTC 60.828 65.000 0.00 0.00 0.00 4.79
117 118 2.201022 CCCATACTCCCTCCGGTCG 61.201 68.421 0.00 0.00 0.00 4.79
118 119 2.201022 CCATACTCCCTCCGGTCGG 61.201 68.421 0.00 2.52 0.00 4.79
119 120 1.455217 CATACTCCCTCCGGTCGGT 60.455 63.158 9.36 0.00 36.47 4.69
120 121 1.041447 CATACTCCCTCCGGTCGGTT 61.041 60.000 9.36 0.00 36.47 4.44
121 122 0.754587 ATACTCCCTCCGGTCGGTTC 60.755 60.000 9.36 0.00 36.47 3.62
122 123 2.141011 TACTCCCTCCGGTCGGTTCA 62.141 60.000 9.36 0.00 36.47 3.18
123 124 2.678934 TCCCTCCGGTCGGTTCAG 60.679 66.667 9.36 0.00 36.47 3.02
124 125 2.678934 CCCTCCGGTCGGTTCAGA 60.679 66.667 9.36 0.00 36.47 3.27
125 126 2.058595 CCCTCCGGTCGGTTCAGAT 61.059 63.158 9.36 0.00 36.47 2.90
126 127 1.614241 CCCTCCGGTCGGTTCAGATT 61.614 60.000 9.36 0.00 36.47 2.40
127 128 0.249398 CCTCCGGTCGGTTCAGATTT 59.751 55.000 9.36 0.00 36.47 2.17
128 129 1.479323 CCTCCGGTCGGTTCAGATTTA 59.521 52.381 9.36 0.00 36.47 1.40
129 130 2.537401 CTCCGGTCGGTTCAGATTTAC 58.463 52.381 9.36 0.00 36.47 2.01
130 131 1.894466 TCCGGTCGGTTCAGATTTACA 59.106 47.619 9.36 0.00 36.47 2.41
131 132 2.299582 TCCGGTCGGTTCAGATTTACAA 59.700 45.455 9.36 0.00 36.47 2.41
132 133 2.671396 CCGGTCGGTTCAGATTTACAAG 59.329 50.000 0.55 0.00 0.00 3.16
133 134 3.323243 CGGTCGGTTCAGATTTACAAGT 58.677 45.455 0.00 0.00 0.00 3.16
134 135 3.367025 CGGTCGGTTCAGATTTACAAGTC 59.633 47.826 0.00 0.00 0.00 3.01
135 136 4.566987 GGTCGGTTCAGATTTACAAGTCT 58.433 43.478 0.00 0.00 0.00 3.24
136 137 4.626172 GGTCGGTTCAGATTTACAAGTCTC 59.374 45.833 0.00 0.00 0.00 3.36
137 138 4.323868 GTCGGTTCAGATTTACAAGTCTCG 59.676 45.833 0.00 0.00 0.00 4.04
138 139 3.060895 CGGTTCAGATTTACAAGTCTCGC 59.939 47.826 0.00 0.00 0.00 5.03
139 140 3.994392 GGTTCAGATTTACAAGTCTCGCA 59.006 43.478 0.00 0.00 0.00 5.10
140 141 4.631813 GGTTCAGATTTACAAGTCTCGCAT 59.368 41.667 0.00 0.00 0.00 4.73
141 142 5.446473 GGTTCAGATTTACAAGTCTCGCATG 60.446 44.000 0.00 0.00 0.00 4.06
142 143 4.820897 TCAGATTTACAAGTCTCGCATGT 58.179 39.130 0.00 0.00 33.26 3.21
143 144 5.961272 TCAGATTTACAAGTCTCGCATGTA 58.039 37.500 0.00 0.00 30.97 2.29
144 145 6.573434 TCAGATTTACAAGTCTCGCATGTAT 58.427 36.000 0.00 0.00 32.26 2.29
145 146 7.041721 TCAGATTTACAAGTCTCGCATGTATT 58.958 34.615 0.00 0.00 32.26 1.89
146 147 7.549134 TCAGATTTACAAGTCTCGCATGTATTT 59.451 33.333 0.00 0.00 32.26 1.40
147 148 7.848051 CAGATTTACAAGTCTCGCATGTATTTC 59.152 37.037 0.00 0.00 32.26 2.17
148 149 7.549134 AGATTTACAAGTCTCGCATGTATTTCA 59.451 33.333 0.00 0.00 32.26 2.69
149 150 7.428282 TTTACAAGTCTCGCATGTATTTCAA 57.572 32.000 0.00 0.00 32.26 2.69
150 151 7.609760 TTACAAGTCTCGCATGTATTTCAAT 57.390 32.000 0.00 0.00 32.26 2.57
151 152 6.111768 ACAAGTCTCGCATGTATTTCAATC 57.888 37.500 0.00 0.00 0.00 2.67
152 153 5.643348 ACAAGTCTCGCATGTATTTCAATCA 59.357 36.000 0.00 0.00 0.00 2.57
153 154 5.980698 AGTCTCGCATGTATTTCAATCAG 57.019 39.130 0.00 0.00 0.00 2.90
154 155 5.664457 AGTCTCGCATGTATTTCAATCAGA 58.336 37.500 0.00 0.00 0.00 3.27
155 156 6.108687 AGTCTCGCATGTATTTCAATCAGAA 58.891 36.000 0.00 0.00 0.00 3.02
183 184 3.957288 GGACTAGCCCTTGAAAGCA 57.043 52.632 0.00 0.00 0.00 3.91
184 185 2.426842 GGACTAGCCCTTGAAAGCAT 57.573 50.000 0.00 0.00 0.00 3.79
185 186 3.560636 GGACTAGCCCTTGAAAGCATA 57.439 47.619 0.00 0.00 0.00 3.14
186 187 4.092116 GGACTAGCCCTTGAAAGCATAT 57.908 45.455 0.00 0.00 0.00 1.78
187 188 5.228945 GGACTAGCCCTTGAAAGCATATA 57.771 43.478 0.00 0.00 0.00 0.86
188 189 5.810095 GGACTAGCCCTTGAAAGCATATAT 58.190 41.667 0.00 0.00 0.00 0.86
189 190 6.241645 GGACTAGCCCTTGAAAGCATATATT 58.758 40.000 0.00 0.00 0.00 1.28
190 191 6.717084 GGACTAGCCCTTGAAAGCATATATTT 59.283 38.462 0.00 0.00 0.00 1.40
191 192 7.883311 GGACTAGCCCTTGAAAGCATATATTTA 59.117 37.037 0.00 0.00 0.00 1.40
192 193 9.454859 GACTAGCCCTTGAAAGCATATATTTAT 57.545 33.333 0.00 0.00 0.00 1.40
214 215 8.879342 TTATAGAAGAAATCTCTAAGCAGCAC 57.121 34.615 0.00 0.00 39.71 4.40
215 216 4.180057 AGAAGAAATCTCTAAGCAGCACG 58.820 43.478 0.00 0.00 30.46 5.34
216 217 3.876274 AGAAATCTCTAAGCAGCACGA 57.124 42.857 0.00 0.00 0.00 4.35
217 218 3.779759 AGAAATCTCTAAGCAGCACGAG 58.220 45.455 0.00 0.00 0.00 4.18
218 219 1.933247 AATCTCTAAGCAGCACGAGC 58.067 50.000 0.00 0.00 42.56 5.03
228 229 3.121019 GCACGAGCTACTCCGGAT 58.879 61.111 3.57 0.00 37.91 4.18
229 230 1.437986 GCACGAGCTACTCCGGATT 59.562 57.895 3.57 0.52 37.91 3.01
230 231 0.595310 GCACGAGCTACTCCGGATTC 60.595 60.000 3.57 0.00 37.91 2.52
231 232 1.025812 CACGAGCTACTCCGGATTCT 58.974 55.000 3.57 0.00 0.00 2.40
232 233 1.002251 CACGAGCTACTCCGGATTCTC 60.002 57.143 3.57 8.37 0.00 2.87
233 234 1.309950 CGAGCTACTCCGGATTCTCA 58.690 55.000 3.57 0.00 0.00 3.27
234 235 1.883275 CGAGCTACTCCGGATTCTCAT 59.117 52.381 3.57 0.00 0.00 2.90
235 236 2.095466 CGAGCTACTCCGGATTCTCATC 60.095 54.545 3.57 0.00 0.00 2.92
236 237 2.230266 GAGCTACTCCGGATTCTCATCC 59.770 54.545 3.57 0.00 45.40 3.51
249 250 7.496529 GGATTCTCATCCGTAATTTGATCAA 57.503 36.000 3.38 3.38 39.93 2.57
250 251 7.355778 GGATTCTCATCCGTAATTTGATCAAC 58.644 38.462 7.89 0.00 39.93 3.18
251 252 7.012327 GGATTCTCATCCGTAATTTGATCAACA 59.988 37.037 7.89 0.11 39.93 3.33
252 253 7.680442 TTCTCATCCGTAATTTGATCAACAA 57.320 32.000 7.89 0.00 36.65 2.83
304 305 9.730705 AACTTTCAATCTACTCATCTTCAATCA 57.269 29.630 0.00 0.00 0.00 2.57
305 306 9.902684 ACTTTCAATCTACTCATCTTCAATCAT 57.097 29.630 0.00 0.00 0.00 2.45
307 308 8.672823 TTCAATCTACTCATCTTCAATCATGG 57.327 34.615 0.00 0.00 0.00 3.66
308 309 7.799081 TCAATCTACTCATCTTCAATCATGGT 58.201 34.615 0.00 0.00 0.00 3.55
309 310 8.927411 TCAATCTACTCATCTTCAATCATGGTA 58.073 33.333 0.00 0.00 0.00 3.25
310 311 9.205719 CAATCTACTCATCTTCAATCATGGTAG 57.794 37.037 0.00 0.00 31.59 3.18
311 312 7.904558 TCTACTCATCTTCAATCATGGTAGT 57.095 36.000 0.00 0.00 31.92 2.73
312 313 8.996651 TCTACTCATCTTCAATCATGGTAGTA 57.003 34.615 0.00 0.00 31.92 1.82
313 314 8.851145 TCTACTCATCTTCAATCATGGTAGTAC 58.149 37.037 0.00 0.00 31.92 2.73
314 315 7.423844 ACTCATCTTCAATCATGGTAGTACA 57.576 36.000 2.06 0.00 0.00 2.90
315 316 7.851228 ACTCATCTTCAATCATGGTAGTACAA 58.149 34.615 2.06 0.00 0.00 2.41
316 317 8.489489 ACTCATCTTCAATCATGGTAGTACAAT 58.511 33.333 2.06 0.00 0.00 2.71
317 318 8.667076 TCATCTTCAATCATGGTAGTACAATG 57.333 34.615 11.00 11.00 0.00 2.82
318 319 8.485392 TCATCTTCAATCATGGTAGTACAATGA 58.515 33.333 20.34 20.34 0.00 2.57
319 320 9.112725 CATCTTCAATCATGGTAGTACAATGAA 57.887 33.333 21.60 7.10 0.00 2.57
320 321 8.492673 TCTTCAATCATGGTAGTACAATGAAC 57.507 34.615 21.60 0.00 0.00 3.18
321 322 8.100164 TCTTCAATCATGGTAGTACAATGAACA 58.900 33.333 21.60 8.08 0.00 3.18
322 323 7.609760 TCAATCATGGTAGTACAATGAACAC 57.390 36.000 21.60 0.00 0.00 3.32
323 324 7.394016 TCAATCATGGTAGTACAATGAACACT 58.606 34.615 21.60 5.26 0.00 3.55
324 325 7.549134 TCAATCATGGTAGTACAATGAACACTC 59.451 37.037 21.60 0.00 0.00 3.51
325 326 5.407502 TCATGGTAGTACAATGAACACTCG 58.592 41.667 16.63 0.00 0.00 4.18
326 327 5.184287 TCATGGTAGTACAATGAACACTCGA 59.816 40.000 16.63 0.00 0.00 4.04
327 328 5.456548 TGGTAGTACAATGAACACTCGAA 57.543 39.130 2.06 0.00 0.00 3.71
328 329 5.845103 TGGTAGTACAATGAACACTCGAAA 58.155 37.500 2.06 0.00 0.00 3.46
329 330 6.460781 TGGTAGTACAATGAACACTCGAAAT 58.539 36.000 2.06 0.00 0.00 2.17
330 331 7.604549 TGGTAGTACAATGAACACTCGAAATA 58.395 34.615 2.06 0.00 0.00 1.40
331 332 8.089597 TGGTAGTACAATGAACACTCGAAATAA 58.910 33.333 2.06 0.00 0.00 1.40
332 333 9.095065 GGTAGTACAATGAACACTCGAAATAAT 57.905 33.333 2.06 0.00 0.00 1.28
357 358 7.787725 AAAAATTACATCCAGATCCGTAGAC 57.212 36.000 0.00 0.00 0.00 2.59
358 359 5.470047 AATTACATCCAGATCCGTAGACC 57.530 43.478 0.00 0.00 0.00 3.85
359 360 2.454336 ACATCCAGATCCGTAGACCA 57.546 50.000 0.00 0.00 0.00 4.02
360 361 2.032620 ACATCCAGATCCGTAGACCAC 58.967 52.381 0.00 0.00 0.00 4.16
361 362 1.341531 CATCCAGATCCGTAGACCACC 59.658 57.143 0.00 0.00 0.00 4.61
362 363 0.629596 TCCAGATCCGTAGACCACCT 59.370 55.000 0.00 0.00 0.00 4.00
363 364 1.848388 TCCAGATCCGTAGACCACCTA 59.152 52.381 0.00 0.00 0.00 3.08
364 365 2.445905 TCCAGATCCGTAGACCACCTAT 59.554 50.000 0.00 0.00 0.00 2.57
365 366 2.820787 CCAGATCCGTAGACCACCTATC 59.179 54.545 0.00 0.00 0.00 2.08
366 367 2.484651 CAGATCCGTAGACCACCTATCG 59.515 54.545 0.00 0.00 0.00 2.92
367 368 2.371179 AGATCCGTAGACCACCTATCGA 59.629 50.000 0.00 0.00 0.00 3.59
368 369 1.959042 TCCGTAGACCACCTATCGAC 58.041 55.000 0.00 0.00 0.00 4.20
369 370 0.585357 CCGTAGACCACCTATCGACG 59.415 60.000 0.00 1.35 42.58 5.12
370 371 1.575244 CGTAGACCACCTATCGACGA 58.425 55.000 0.00 0.00 44.77 4.20
371 372 1.260033 CGTAGACCACCTATCGACGAC 59.740 57.143 0.00 0.00 44.77 4.34
372 373 2.559440 GTAGACCACCTATCGACGACT 58.441 52.381 0.00 0.00 0.00 4.18
373 374 2.996249 AGACCACCTATCGACGACTA 57.004 50.000 0.00 0.00 0.00 2.59
374 375 2.559440 AGACCACCTATCGACGACTAC 58.441 52.381 0.00 0.00 0.00 2.73
375 376 2.093288 AGACCACCTATCGACGACTACA 60.093 50.000 0.00 0.00 0.00 2.74
376 377 2.679837 GACCACCTATCGACGACTACAA 59.320 50.000 0.00 0.00 0.00 2.41
377 378 3.084039 ACCACCTATCGACGACTACAAA 58.916 45.455 0.00 0.00 0.00 2.83
378 379 3.119708 ACCACCTATCGACGACTACAAAC 60.120 47.826 0.00 0.00 0.00 2.93
379 380 3.119743 CCACCTATCGACGACTACAAACA 60.120 47.826 0.00 0.00 0.00 2.83
380 381 3.850273 CACCTATCGACGACTACAAACAC 59.150 47.826 0.00 0.00 0.00 3.32
381 382 3.755378 ACCTATCGACGACTACAAACACT 59.245 43.478 0.00 0.00 0.00 3.55
382 383 4.096311 CCTATCGACGACTACAAACACTG 58.904 47.826 0.00 0.00 0.00 3.66
383 384 3.909776 ATCGACGACTACAAACACTGA 57.090 42.857 0.00 0.00 0.00 3.41
384 385 3.696281 TCGACGACTACAAACACTGAA 57.304 42.857 0.00 0.00 0.00 3.02
385 386 3.624900 TCGACGACTACAAACACTGAAG 58.375 45.455 0.00 0.00 0.00 3.02
386 387 2.153247 CGACGACTACAAACACTGAAGC 59.847 50.000 0.00 0.00 0.00 3.86
387 388 2.124903 ACGACTACAAACACTGAAGCG 58.875 47.619 0.00 0.00 0.00 4.68
388 389 2.223641 ACGACTACAAACACTGAAGCGA 60.224 45.455 0.00 0.00 0.00 4.93
389 390 2.405357 CGACTACAAACACTGAAGCGAG 59.595 50.000 0.00 0.00 0.00 5.03
390 391 2.135933 ACTACAAACACTGAAGCGAGC 58.864 47.619 0.00 0.00 0.00 5.03
391 392 1.461127 CTACAAACACTGAAGCGAGCC 59.539 52.381 0.00 0.00 0.00 4.70
392 393 1.205064 CAAACACTGAAGCGAGCCG 59.795 57.895 0.00 0.00 0.00 5.52
393 394 1.069090 AAACACTGAAGCGAGCCGA 59.931 52.632 0.00 0.00 0.00 5.54
394 395 0.531974 AAACACTGAAGCGAGCCGAA 60.532 50.000 0.00 0.00 0.00 4.30
395 396 0.946221 AACACTGAAGCGAGCCGAAG 60.946 55.000 0.00 0.00 0.00 3.79
396 397 1.080501 CACTGAAGCGAGCCGAAGA 60.081 57.895 0.00 0.00 0.00 2.87
397 398 1.080434 ACTGAAGCGAGCCGAAGAC 60.080 57.895 0.00 0.00 0.00 3.01
398 399 2.126463 TGAAGCGAGCCGAAGACG 60.126 61.111 0.00 0.00 39.43 4.18
399 400 2.126424 GAAGCGAGCCGAAGACGT 60.126 61.111 0.00 0.00 37.88 4.34
400 401 1.733399 GAAGCGAGCCGAAGACGTT 60.733 57.895 0.00 0.00 37.88 3.99
401 402 0.455633 GAAGCGAGCCGAAGACGTTA 60.456 55.000 0.00 0.00 37.88 3.18
402 403 0.456312 AAGCGAGCCGAAGACGTTAG 60.456 55.000 0.00 0.00 37.88 2.34
403 404 1.154073 GCGAGCCGAAGACGTTAGT 60.154 57.895 0.00 0.00 37.88 2.24
404 405 0.731855 GCGAGCCGAAGACGTTAGTT 60.732 55.000 0.00 0.00 37.88 2.24
405 406 1.466360 GCGAGCCGAAGACGTTAGTTA 60.466 52.381 0.00 0.00 37.88 2.24
406 407 2.172365 CGAGCCGAAGACGTTAGTTAC 58.828 52.381 0.00 0.00 37.88 2.50
407 408 2.413239 CGAGCCGAAGACGTTAGTTACA 60.413 50.000 0.00 0.00 37.88 2.41
408 409 3.730061 CGAGCCGAAGACGTTAGTTACAT 60.730 47.826 0.00 0.00 37.88 2.29
409 410 3.508762 AGCCGAAGACGTTAGTTACATG 58.491 45.455 0.00 0.00 37.88 3.21
410 411 3.057033 AGCCGAAGACGTTAGTTACATGT 60.057 43.478 2.69 2.69 37.88 3.21
411 412 3.676646 GCCGAAGACGTTAGTTACATGTT 59.323 43.478 2.30 0.00 37.88 2.71
412 413 4.201561 GCCGAAGACGTTAGTTACATGTTC 60.202 45.833 2.30 0.00 37.88 3.18
413 414 4.029861 CCGAAGACGTTAGTTACATGTTCG 59.970 45.833 2.30 2.18 37.88 3.95
414 415 4.029861 CGAAGACGTTAGTTACATGTTCGG 59.970 45.833 2.30 0.00 32.34 4.30
415 416 4.771590 AGACGTTAGTTACATGTTCGGA 57.228 40.909 2.30 0.00 0.00 4.55
416 417 5.125100 AGACGTTAGTTACATGTTCGGAA 57.875 39.130 2.30 0.00 0.00 4.30
417 418 5.531634 AGACGTTAGTTACATGTTCGGAAA 58.468 37.500 2.30 0.00 0.00 3.13
418 419 5.984926 AGACGTTAGTTACATGTTCGGAAAA 59.015 36.000 2.30 0.00 0.00 2.29
419 420 6.479660 AGACGTTAGTTACATGTTCGGAAAAA 59.520 34.615 2.30 0.00 0.00 1.94
449 450 4.012374 TGGATTCACCATTCAAGAGAAGC 58.988 43.478 0.00 0.00 44.64 3.86
450 451 4.263639 TGGATTCACCATTCAAGAGAAGCT 60.264 41.667 0.00 0.00 44.64 3.74
451 452 4.704057 GGATTCACCATTCAAGAGAAGCTT 59.296 41.667 0.00 0.00 37.14 3.74
452 453 5.163673 GGATTCACCATTCAAGAGAAGCTTC 60.164 44.000 19.11 19.11 37.14 3.86
453 454 4.630644 TCACCATTCAAGAGAAGCTTCT 57.369 40.909 28.83 28.83 41.00 2.85
454 455 5.745312 TCACCATTCAAGAGAAGCTTCTA 57.255 39.130 28.53 13.50 37.73 2.10
455 456 6.305272 TCACCATTCAAGAGAAGCTTCTAT 57.695 37.500 28.53 23.22 37.73 1.98
456 457 6.111382 TCACCATTCAAGAGAAGCTTCTATG 58.889 40.000 28.53 26.62 37.73 2.23
457 458 6.070596 TCACCATTCAAGAGAAGCTTCTATGA 60.071 38.462 28.53 28.19 37.73 2.15
458 459 6.766944 CACCATTCAAGAGAAGCTTCTATGAT 59.233 38.462 30.27 21.72 37.73 2.45
459 460 6.766944 ACCATTCAAGAGAAGCTTCTATGATG 59.233 38.462 30.27 27.12 37.73 3.07
460 461 6.766944 CCATTCAAGAGAAGCTTCTATGATGT 59.233 38.462 30.27 22.96 37.73 3.06
461 462 7.930325 CCATTCAAGAGAAGCTTCTATGATGTA 59.070 37.037 30.27 21.72 37.73 2.29
462 463 9.491675 CATTCAAGAGAAGCTTCTATGATGTAT 57.508 33.333 30.27 22.55 37.73 2.29
464 465 9.539825 TTCAAGAGAAGCTTCTATGATGTATTC 57.460 33.333 30.27 16.84 37.73 1.75
465 466 8.147058 TCAAGAGAAGCTTCTATGATGTATTCC 58.853 37.037 28.53 11.59 37.73 3.01
466 467 7.003402 AGAGAAGCTTCTATGATGTATTCCC 57.997 40.000 28.53 11.39 37.73 3.97
467 468 6.786959 AGAGAAGCTTCTATGATGTATTCCCT 59.213 38.462 28.53 13.44 37.73 4.20
468 469 7.003402 AGAAGCTTCTATGATGTATTCCCTC 57.997 40.000 27.47 0.00 35.34 4.30
469 470 6.786959 AGAAGCTTCTATGATGTATTCCCTCT 59.213 38.462 27.47 0.00 35.34 3.69
470 471 6.357579 AGCTTCTATGATGTATTCCCTCTG 57.642 41.667 0.00 0.00 0.00 3.35
471 472 5.843421 AGCTTCTATGATGTATTCCCTCTGT 59.157 40.000 0.00 0.00 0.00 3.41
472 473 7.013220 AGCTTCTATGATGTATTCCCTCTGTA 58.987 38.462 0.00 0.00 0.00 2.74
473 474 7.510685 AGCTTCTATGATGTATTCCCTCTGTAA 59.489 37.037 0.00 0.00 0.00 2.41
474 475 8.150945 GCTTCTATGATGTATTCCCTCTGTAAA 58.849 37.037 0.00 0.00 0.00 2.01
475 476 9.703892 CTTCTATGATGTATTCCCTCTGTAAAG 57.296 37.037 0.00 0.00 0.00 1.85
476 477 9.434275 TTCTATGATGTATTCCCTCTGTAAAGA 57.566 33.333 0.00 0.00 0.00 2.52
477 478 9.434275 TCTATGATGTATTCCCTCTGTAAAGAA 57.566 33.333 0.00 0.00 0.00 2.52
487 488 7.366847 TCCCTCTGTAAAGAAATATGAGAGG 57.633 40.000 0.00 0.00 43.23 3.69
489 490 7.366847 CCTCTGTAAAGAAATATGAGAGGGA 57.633 40.000 0.00 0.00 40.94 4.20
490 491 7.972301 CCTCTGTAAAGAAATATGAGAGGGAT 58.028 38.462 0.00 0.00 40.94 3.85
491 492 8.435982 CCTCTGTAAAGAAATATGAGAGGGATT 58.564 37.037 0.00 0.00 40.94 3.01
492 493 9.844257 CTCTGTAAAGAAATATGAGAGGGATTT 57.156 33.333 0.00 0.00 0.00 2.17
493 494 9.618890 TCTGTAAAGAAATATGAGAGGGATTTG 57.381 33.333 0.00 0.00 0.00 2.32
494 495 8.752005 TGTAAAGAAATATGAGAGGGATTTGG 57.248 34.615 0.00 0.00 0.00 3.28
495 496 8.336235 TGTAAAGAAATATGAGAGGGATTTGGT 58.664 33.333 0.00 0.00 0.00 3.67
496 497 7.888250 AAAGAAATATGAGAGGGATTTGGTC 57.112 36.000 0.00 0.00 0.00 4.02
497 498 6.581388 AGAAATATGAGAGGGATTTGGTCA 57.419 37.500 0.00 0.00 0.00 4.02
498 499 6.360618 AGAAATATGAGAGGGATTTGGTCAC 58.639 40.000 0.00 0.00 0.00 3.67
499 500 5.983333 AATATGAGAGGGATTTGGTCACT 57.017 39.130 0.00 0.00 45.50 3.41
500 501 7.348274 AGAAATATGAGAGGGATTTGGTCACTA 59.652 37.037 0.00 0.00 41.91 2.74
501 502 7.451731 AATATGAGAGGGATTTGGTCACTAA 57.548 36.000 0.00 0.00 41.91 2.24
502 503 5.779241 ATGAGAGGGATTTGGTCACTAAA 57.221 39.130 0.00 0.00 41.91 1.85
503 504 5.576563 TGAGAGGGATTTGGTCACTAAAA 57.423 39.130 0.00 0.00 41.91 1.52
504 505 6.139679 TGAGAGGGATTTGGTCACTAAAAT 57.860 37.500 0.00 0.00 41.91 1.82
505 506 7.265599 TGAGAGGGATTTGGTCACTAAAATA 57.734 36.000 0.00 0.00 41.91 1.40
506 507 7.338710 TGAGAGGGATTTGGTCACTAAAATAG 58.661 38.462 0.00 0.00 41.91 1.73
507 508 7.037586 TGAGAGGGATTTGGTCACTAAAATAGT 60.038 37.037 0.00 0.00 41.91 2.12
563 564 9.921637 TTTGTTAATCAATTAATGGTCAAGGTC 57.078 29.630 0.00 0.00 35.02 3.85
564 565 8.877864 TGTTAATCAATTAATGGTCAAGGTCT 57.122 30.769 0.00 0.00 35.02 3.85
565 566 9.308000 TGTTAATCAATTAATGGTCAAGGTCTT 57.692 29.630 0.00 0.00 35.02 3.01
568 569 8.421249 AATCAATTAATGGTCAAGGTCTTTCA 57.579 30.769 0.00 0.00 0.00 2.69
569 570 7.214467 TCAATTAATGGTCAAGGTCTTTCAC 57.786 36.000 0.00 0.00 0.00 3.18
570 571 7.004086 TCAATTAATGGTCAAGGTCTTTCACT 58.996 34.615 0.00 0.00 0.00 3.41
571 572 8.160765 TCAATTAATGGTCAAGGTCTTTCACTA 58.839 33.333 0.00 0.00 0.00 2.74
572 573 8.792633 CAATTAATGGTCAAGGTCTTTCACTAA 58.207 33.333 0.00 0.00 0.00 2.24
573 574 9.533831 AATTAATGGTCAAGGTCTTTCACTAAT 57.466 29.630 0.00 0.00 0.00 1.73
576 577 8.511604 AATGGTCAAGGTCTTTCACTAATATG 57.488 34.615 0.00 0.00 0.00 1.78
577 578 5.880332 TGGTCAAGGTCTTTCACTAATATGC 59.120 40.000 0.00 0.00 0.00 3.14
578 579 6.116126 GGTCAAGGTCTTTCACTAATATGCT 58.884 40.000 0.00 0.00 0.00 3.79
579 580 6.258947 GGTCAAGGTCTTTCACTAATATGCTC 59.741 42.308 0.00 0.00 0.00 4.26
580 581 6.258947 GTCAAGGTCTTTCACTAATATGCTCC 59.741 42.308 0.00 0.00 0.00 4.70
581 582 5.297569 AGGTCTTTCACTAATATGCTCCC 57.702 43.478 0.00 0.00 0.00 4.30
582 583 4.721776 AGGTCTTTCACTAATATGCTCCCA 59.278 41.667 0.00 0.00 0.00 4.37
583 584 5.370880 AGGTCTTTCACTAATATGCTCCCAT 59.629 40.000 0.00 0.00 35.44 4.00
584 585 5.471456 GGTCTTTCACTAATATGCTCCCATG 59.529 44.000 0.00 0.00 32.85 3.66
585 586 5.471456 GTCTTTCACTAATATGCTCCCATGG 59.529 44.000 4.14 4.14 32.85 3.66
586 587 3.423539 TCACTAATATGCTCCCATGGC 57.576 47.619 6.09 0.00 32.85 4.40
587 588 2.040278 TCACTAATATGCTCCCATGGCC 59.960 50.000 6.09 0.00 32.85 5.36
588 589 1.355720 ACTAATATGCTCCCATGGCCC 59.644 52.381 6.09 0.00 32.85 5.80
589 590 0.704076 TAATATGCTCCCATGGCCCC 59.296 55.000 6.09 0.00 32.85 5.80
590 591 1.370651 AATATGCTCCCATGGCCCCA 61.371 55.000 6.09 2.34 32.85 4.96
591 592 1.370651 ATATGCTCCCATGGCCCCAA 61.371 55.000 6.09 0.00 32.85 4.12
592 593 1.370651 TATGCTCCCATGGCCCCAAT 61.371 55.000 6.09 0.00 32.85 3.16
593 594 2.041612 GCTCCCATGGCCCCAATT 60.042 61.111 6.09 0.00 0.00 2.32
594 595 1.690283 GCTCCCATGGCCCCAATTT 60.690 57.895 6.09 0.00 0.00 1.82
595 596 1.974973 GCTCCCATGGCCCCAATTTG 61.975 60.000 6.09 0.00 0.00 2.32
596 597 0.325484 CTCCCATGGCCCCAATTTGA 60.325 55.000 6.09 0.00 0.00 2.69
597 598 0.117943 TCCCATGGCCCCAATTTGAA 59.882 50.000 6.09 0.00 0.00 2.69
598 599 0.990374 CCCATGGCCCCAATTTGAAA 59.010 50.000 6.09 0.00 0.00 2.69
599 600 1.353694 CCCATGGCCCCAATTTGAAAA 59.646 47.619 6.09 0.00 0.00 2.29
600 601 2.224967 CCCATGGCCCCAATTTGAAAAA 60.225 45.455 6.09 0.00 0.00 1.94
622 623 7.841915 AAAAGAACAATCAATTTCAAACGGT 57.158 28.000 0.00 0.00 0.00 4.83
623 624 8.934507 AAAAGAACAATCAATTTCAAACGGTA 57.065 26.923 0.00 0.00 0.00 4.02
624 625 7.924103 AAGAACAATCAATTTCAAACGGTAC 57.076 32.000 0.00 0.00 0.00 3.34
625 626 7.033530 AGAACAATCAATTTCAAACGGTACA 57.966 32.000 0.00 0.00 0.00 2.90
626 627 7.138736 AGAACAATCAATTTCAAACGGTACAG 58.861 34.615 0.00 0.00 0.00 2.74
627 628 6.627395 ACAATCAATTTCAAACGGTACAGA 57.373 33.333 0.00 0.00 0.00 3.41
628 629 7.033530 ACAATCAATTTCAAACGGTACAGAA 57.966 32.000 0.00 0.00 0.00 3.02
629 630 7.484975 ACAATCAATTTCAAACGGTACAGAAA 58.515 30.769 0.00 0.11 34.83 2.52
630 631 7.976734 ACAATCAATTTCAAACGGTACAGAAAA 59.023 29.630 0.00 0.00 34.13 2.29
631 632 8.977505 CAATCAATTTCAAACGGTACAGAAAAT 58.022 29.630 0.00 0.00 34.13 1.82
632 633 8.742554 ATCAATTTCAAACGGTACAGAAAATC 57.257 30.769 0.00 0.00 34.13 2.17
633 634 7.708051 TCAATTTCAAACGGTACAGAAAATCA 58.292 30.769 0.00 0.00 34.13 2.57
634 635 8.356657 TCAATTTCAAACGGTACAGAAAATCAT 58.643 29.630 0.00 0.00 34.13 2.45
635 636 8.977505 CAATTTCAAACGGTACAGAAAATCATT 58.022 29.630 0.00 0.00 34.13 2.57
636 637 9.541143 AATTTCAAACGGTACAGAAAATCATTT 57.459 25.926 0.00 0.00 34.13 2.32
637 638 8.934507 TTTCAAACGGTACAGAAAATCATTTT 57.065 26.923 0.00 0.00 35.12 1.82
638 639 8.934507 TTCAAACGGTACAGAAAATCATTTTT 57.065 26.923 0.00 0.00 37.75 1.94
663 664 9.915629 TTTTTGTAAATGTGAACAGTGTAGTTT 57.084 25.926 0.00 0.00 0.00 2.66
664 665 9.915629 TTTTGTAAATGTGAACAGTGTAGTTTT 57.084 25.926 0.00 0.00 0.00 2.43
665 666 9.915629 TTTGTAAATGTGAACAGTGTAGTTTTT 57.084 25.926 0.00 0.00 0.00 1.94
700 701 7.815840 TTCAGATCCAAATTCAAAGTACACA 57.184 32.000 0.00 0.00 0.00 3.72
701 702 8.408043 TTCAGATCCAAATTCAAAGTACACAT 57.592 30.769 0.00 0.00 0.00 3.21
702 703 8.044060 TCAGATCCAAATTCAAAGTACACATC 57.956 34.615 0.00 0.00 0.00 3.06
703 704 7.665145 TCAGATCCAAATTCAAAGTACACATCA 59.335 33.333 0.00 0.00 0.00 3.07
704 705 8.298854 CAGATCCAAATTCAAAGTACACATCAA 58.701 33.333 0.00 0.00 0.00 2.57
705 706 8.517878 AGATCCAAATTCAAAGTACACATCAAG 58.482 33.333 0.00 0.00 0.00 3.02
706 707 7.815840 TCCAAATTCAAAGTACACATCAAGA 57.184 32.000 0.00 0.00 0.00 3.02
707 708 8.231692 TCCAAATTCAAAGTACACATCAAGAA 57.768 30.769 0.00 0.00 0.00 2.52
708 709 8.690884 TCCAAATTCAAAGTACACATCAAGAAA 58.309 29.630 0.00 0.00 0.00 2.52
709 710 8.755018 CCAAATTCAAAGTACACATCAAGAAAC 58.245 33.333 0.00 0.00 0.00 2.78
710 711 9.299963 CAAATTCAAAGTACACATCAAGAAACA 57.700 29.630 0.00 0.00 0.00 2.83
711 712 9.868277 AAATTCAAAGTACACATCAAGAAACAA 57.132 25.926 0.00 0.00 0.00 2.83
712 713 9.868277 AATTCAAAGTACACATCAAGAAACAAA 57.132 25.926 0.00 0.00 0.00 2.83
713 714 9.868277 ATTCAAAGTACACATCAAGAAACAAAA 57.132 25.926 0.00 0.00 0.00 2.44
714 715 9.698309 TTCAAAGTACACATCAAGAAACAAAAA 57.302 25.926 0.00 0.00 0.00 1.94
736 737 8.638685 AAAAAGACAAATCAAGATGTGAACAG 57.361 30.769 7.22 0.00 40.50 3.16
737 738 6.949352 AAGACAAATCAAGATGTGAACAGT 57.051 33.333 7.22 0.00 40.50 3.55
738 739 6.309712 AGACAAATCAAGATGTGAACAGTG 57.690 37.500 7.22 0.00 40.50 3.66
739 740 5.824624 AGACAAATCAAGATGTGAACAGTGT 59.175 36.000 7.22 0.00 40.50 3.55
740 741 6.992123 AGACAAATCAAGATGTGAACAGTGTA 59.008 34.615 7.22 0.00 40.50 2.90
741 742 7.663081 AGACAAATCAAGATGTGAACAGTGTAT 59.337 33.333 7.22 0.00 40.50 2.29
742 743 7.587629 ACAAATCAAGATGTGAACAGTGTATG 58.412 34.615 7.22 0.00 40.50 2.39
743 744 6.748333 AATCAAGATGTGAACAGTGTATGG 57.252 37.500 0.00 0.00 40.50 2.74
744 745 4.578871 TCAAGATGTGAACAGTGTATGGG 58.421 43.478 0.00 0.00 31.51 4.00
745 746 4.285775 TCAAGATGTGAACAGTGTATGGGA 59.714 41.667 0.00 0.00 31.51 4.37
746 747 4.207891 AGATGTGAACAGTGTATGGGAC 57.792 45.455 0.00 0.00 0.00 4.46
747 748 8.152086 TCAAGATGTGAACAGTGTATGGGACA 62.152 42.308 0.00 0.00 36.26 4.02
748 749 9.530819 TCAAGATGTGAACAGTGTATGGGACAA 62.531 40.741 0.00 0.00 35.52 3.18
761 762 3.126001 TGGGACAAGACATGTTCAGTC 57.874 47.619 0.00 8.27 44.12 3.51
762 763 2.224523 TGGGACAAGACATGTTCAGTCC 60.225 50.000 24.80 24.80 44.12 3.85
763 764 2.427506 GGACAAGACATGTTCAGTCCC 58.572 52.381 23.42 9.65 44.12 4.46
764 765 2.427506 GACAAGACATGTTCAGTCCCC 58.572 52.381 0.00 0.00 44.12 4.81
765 766 1.774254 ACAAGACATGTTCAGTCCCCA 59.226 47.619 0.00 0.00 40.06 4.96
766 767 2.376518 ACAAGACATGTTCAGTCCCCAT 59.623 45.455 0.00 0.00 40.06 4.00
767 768 3.181429 ACAAGACATGTTCAGTCCCCATT 60.181 43.478 0.00 0.00 40.06 3.16
768 769 4.042809 ACAAGACATGTTCAGTCCCCATTA 59.957 41.667 0.00 0.00 40.06 1.90
769 770 4.494091 AGACATGTTCAGTCCCCATTAG 57.506 45.455 0.00 0.00 36.68 1.73
770 771 3.200825 AGACATGTTCAGTCCCCATTAGG 59.799 47.826 0.00 0.00 36.68 2.69
771 772 3.189606 ACATGTTCAGTCCCCATTAGGA 58.810 45.455 0.00 0.00 38.24 2.94
772 773 3.591527 ACATGTTCAGTCCCCATTAGGAA 59.408 43.478 0.00 0.00 37.78 3.36
773 774 4.202441 CATGTTCAGTCCCCATTAGGAAG 58.798 47.826 0.00 0.00 37.78 3.46
774 775 3.256704 TGTTCAGTCCCCATTAGGAAGT 58.743 45.455 0.00 0.00 37.78 3.01
775 776 3.655777 TGTTCAGTCCCCATTAGGAAGTT 59.344 43.478 0.00 0.00 37.78 2.66
907 908 1.210931 CCTCTTGTTGTGCATGCGG 59.789 57.895 14.09 0.16 0.00 5.69
908 909 1.443194 CTCTTGTTGTGCATGCGGC 60.443 57.895 14.09 9.18 45.13 6.53
937 939 1.063174 GTGAAGCAATCGCCTGTGATC 59.937 52.381 0.00 0.00 39.83 2.92
938 940 1.065926 TGAAGCAATCGCCTGTGATCT 60.066 47.619 0.00 0.00 39.83 2.75
954 956 5.745227 TGTGATCTAAGGTTTGGAGGAATC 58.255 41.667 0.00 0.00 0.00 2.52
973 975 1.451927 GGCATGGCGACTGATGGAA 60.452 57.895 2.41 0.00 0.00 3.53
998 1000 0.684479 AGCGGATCAGGTAGTCAGCA 60.684 55.000 0.00 0.00 37.89 4.41
1038 1040 6.375455 GCAAAATCTTGGAGAGGTTGAATCTA 59.625 38.462 7.28 0.00 32.76 1.98
1085 1087 6.678568 AGTTTGGGAAGATGAGATCGATAT 57.321 37.500 0.00 0.00 0.00 1.63
1257 1259 5.389859 TTCAATTCAATTGTCTTGGCGAT 57.610 34.783 9.98 0.00 41.02 4.58
1278 1280 1.470996 GGAACAAGGCCATGCACCAA 61.471 55.000 8.15 0.00 0.00 3.67
1323 1325 2.899900 TGCTCTAATCATGGCGGAGTAT 59.100 45.455 0.00 0.00 0.00 2.12
1530 1532 4.628074 GACTTAGAGGCATAACCGCATTA 58.372 43.478 0.00 0.00 46.52 1.90
1576 1579 5.902613 ATCTTCACACAACCCATGTAATG 57.097 39.130 0.00 0.00 46.21 1.90
1638 1647 8.729756 CCACTTCACACAATACATGAATAAAGA 58.270 33.333 0.00 0.00 32.16 2.52
1676 1685 2.165167 ACAATCAAGGTCCGACTACGA 58.835 47.619 0.00 0.00 42.66 3.43
2025 2042 2.505866 CAAAGCACGGTCGATAAAAGC 58.494 47.619 0.00 0.00 0.00 3.51
2225 2246 2.254350 GGGCACGGCTTTCGAAAC 59.746 61.111 6.47 4.32 42.43 2.78
2447 2468 3.238232 GCACACTCAGATGAGCCAA 57.762 52.632 9.75 0.00 45.79 4.52
2497 2519 2.499685 GTAGCCCGGACATCGCTT 59.500 61.111 0.73 0.00 37.59 4.68
2503 2525 1.429148 CCCGGACATCGCTTAGTTGC 61.429 60.000 0.73 0.00 37.59 4.17
2522 2544 0.668706 CACCAACACTCAGAGGAGCG 60.669 60.000 1.53 0.00 45.42 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.950496 TGCTGGCTATTTATTTATTTTGGAAAA 57.050 25.926 0.00 0.00 0.00 2.29
35 36 9.545105 CATGCTGGCTATTTATTTATTTTGGAA 57.455 29.630 0.00 0.00 0.00 3.53
36 37 8.703743 ACATGCTGGCTATTTATTTATTTTGGA 58.296 29.630 0.00 0.00 0.00 3.53
37 38 8.891671 ACATGCTGGCTATTTATTTATTTTGG 57.108 30.769 0.00 0.00 0.00 3.28
64 65 9.058174 TGTCGTCTATTTCCAACTCAATAAAAA 57.942 29.630 0.00 0.00 0.00 1.94
65 66 8.610248 TGTCGTCTATTTCCAACTCAATAAAA 57.390 30.769 0.00 0.00 0.00 1.52
66 67 8.664798 CATGTCGTCTATTTCCAACTCAATAAA 58.335 33.333 0.00 0.00 0.00 1.40
67 68 7.822334 ACATGTCGTCTATTTCCAACTCAATAA 59.178 33.333 0.00 0.00 0.00 1.40
68 69 7.327975 ACATGTCGTCTATTTCCAACTCAATA 58.672 34.615 0.00 0.00 0.00 1.90
69 70 6.173339 ACATGTCGTCTATTTCCAACTCAAT 58.827 36.000 0.00 0.00 0.00 2.57
70 71 5.547465 ACATGTCGTCTATTTCCAACTCAA 58.453 37.500 0.00 0.00 0.00 3.02
71 72 5.147330 ACATGTCGTCTATTTCCAACTCA 57.853 39.130 0.00 0.00 0.00 3.41
72 73 8.136165 AGTATACATGTCGTCTATTTCCAACTC 58.864 37.037 0.00 0.00 0.00 3.01
73 74 8.008513 AGTATACATGTCGTCTATTTCCAACT 57.991 34.615 0.00 0.00 0.00 3.16
74 75 7.381678 GGAGTATACATGTCGTCTATTTCCAAC 59.618 40.741 0.00 0.00 0.00 3.77
75 76 7.431249 GGAGTATACATGTCGTCTATTTCCAA 58.569 38.462 0.00 0.00 0.00 3.53
76 77 6.015688 GGGAGTATACATGTCGTCTATTTCCA 60.016 42.308 0.00 0.00 0.00 3.53
77 78 6.015688 TGGGAGTATACATGTCGTCTATTTCC 60.016 42.308 0.00 1.38 0.00 3.13
78 79 6.978338 TGGGAGTATACATGTCGTCTATTTC 58.022 40.000 0.00 0.00 0.00 2.17
79 80 6.971726 TGGGAGTATACATGTCGTCTATTT 57.028 37.500 0.00 0.00 0.00 1.40
80 81 7.889073 AGTATGGGAGTATACATGTCGTCTATT 59.111 37.037 0.00 0.00 36.27 1.73
81 82 7.403671 AGTATGGGAGTATACATGTCGTCTAT 58.596 38.462 0.00 0.00 36.27 1.98
82 83 6.776744 AGTATGGGAGTATACATGTCGTCTA 58.223 40.000 0.00 0.00 36.27 2.59
83 84 5.632118 AGTATGGGAGTATACATGTCGTCT 58.368 41.667 0.00 0.00 36.27 4.18
84 85 5.106237 GGAGTATGGGAGTATACATGTCGTC 60.106 48.000 0.00 0.00 36.27 4.20
85 86 4.765856 GGAGTATGGGAGTATACATGTCGT 59.234 45.833 0.00 0.00 36.27 4.34
86 87 4.158025 GGGAGTATGGGAGTATACATGTCG 59.842 50.000 0.00 0.00 36.27 4.35
87 88 5.334421 AGGGAGTATGGGAGTATACATGTC 58.666 45.833 0.00 0.00 36.27 3.06
88 89 5.334421 GAGGGAGTATGGGAGTATACATGT 58.666 45.833 2.69 2.69 36.27 3.21
89 90 4.712337 GGAGGGAGTATGGGAGTATACATG 59.288 50.000 5.50 0.00 36.27 3.21
90 91 4.570079 CGGAGGGAGTATGGGAGTATACAT 60.570 50.000 5.50 0.00 36.27 2.29
91 92 3.245158 CGGAGGGAGTATGGGAGTATACA 60.245 52.174 5.50 0.00 36.27 2.29
92 93 3.354467 CGGAGGGAGTATGGGAGTATAC 58.646 54.545 0.00 0.00 34.48 1.47
93 94 3.733883 CGGAGGGAGTATGGGAGTATA 57.266 52.381 0.00 0.00 0.00 1.47
94 95 2.606751 CGGAGGGAGTATGGGAGTAT 57.393 55.000 0.00 0.00 0.00 2.12
109 110 2.094390 TGTAAATCTGAACCGACCGGAG 60.094 50.000 16.07 0.51 38.96 4.63
110 111 1.894466 TGTAAATCTGAACCGACCGGA 59.106 47.619 16.07 0.00 38.96 5.14
111 112 2.373540 TGTAAATCTGAACCGACCGG 57.626 50.000 6.94 6.94 42.03 5.28
112 113 3.323243 ACTTGTAAATCTGAACCGACCG 58.677 45.455 0.00 0.00 0.00 4.79
113 114 4.566987 AGACTTGTAAATCTGAACCGACC 58.433 43.478 0.00 0.00 0.00 4.79
114 115 4.323868 CGAGACTTGTAAATCTGAACCGAC 59.676 45.833 0.00 0.00 0.00 4.79
115 116 4.482386 CGAGACTTGTAAATCTGAACCGA 58.518 43.478 0.00 0.00 0.00 4.69
116 117 3.060895 GCGAGACTTGTAAATCTGAACCG 59.939 47.826 0.00 0.00 0.00 4.44
117 118 3.994392 TGCGAGACTTGTAAATCTGAACC 59.006 43.478 0.00 0.00 0.00 3.62
118 119 5.120830 ACATGCGAGACTTGTAAATCTGAAC 59.879 40.000 0.00 0.00 35.04 3.18
119 120 5.237815 ACATGCGAGACTTGTAAATCTGAA 58.762 37.500 0.00 0.00 35.04 3.02
120 121 4.820897 ACATGCGAGACTTGTAAATCTGA 58.179 39.130 0.00 0.00 35.04 3.27
121 122 6.834959 ATACATGCGAGACTTGTAAATCTG 57.165 37.500 0.00 0.00 40.93 2.90
122 123 7.549134 TGAAATACATGCGAGACTTGTAAATCT 59.451 33.333 0.00 0.00 40.93 2.40
123 124 7.684670 TGAAATACATGCGAGACTTGTAAATC 58.315 34.615 0.00 0.00 40.93 2.17
124 125 7.609760 TGAAATACATGCGAGACTTGTAAAT 57.390 32.000 0.00 0.00 40.93 1.40
125 126 7.428282 TTGAAATACATGCGAGACTTGTAAA 57.572 32.000 0.00 0.00 40.93 2.01
126 127 7.333174 TGATTGAAATACATGCGAGACTTGTAA 59.667 33.333 0.00 0.00 40.93 2.41
127 128 6.816140 TGATTGAAATACATGCGAGACTTGTA 59.184 34.615 0.00 0.00 41.56 2.41
128 129 5.643348 TGATTGAAATACATGCGAGACTTGT 59.357 36.000 0.00 0.00 39.74 3.16
129 130 6.036408 TCTGATTGAAATACATGCGAGACTTG 59.964 38.462 0.00 0.00 0.00 3.16
130 131 6.108687 TCTGATTGAAATACATGCGAGACTT 58.891 36.000 0.00 0.00 0.00 3.01
131 132 5.664457 TCTGATTGAAATACATGCGAGACT 58.336 37.500 0.00 0.00 0.00 3.24
132 133 5.973651 TCTGATTGAAATACATGCGAGAC 57.026 39.130 0.00 0.00 0.00 3.36
133 134 6.983474 TTTCTGATTGAAATACATGCGAGA 57.017 33.333 0.00 0.00 39.50 4.04
165 166 2.426842 ATGCTTTCAAGGGCTAGTCC 57.573 50.000 4.79 4.79 0.00 3.85
166 167 7.751768 AAATATATGCTTTCAAGGGCTAGTC 57.248 36.000 0.00 0.00 0.00 2.59
188 189 9.319143 GTGCTGCTTAGAGATTTCTTCTATAAA 57.681 33.333 0.00 0.00 37.61 1.40
189 190 7.649705 CGTGCTGCTTAGAGATTTCTTCTATAA 59.350 37.037 0.00 0.00 36.13 0.98
190 191 7.013369 TCGTGCTGCTTAGAGATTTCTTCTATA 59.987 37.037 0.00 0.00 33.74 1.31
191 192 5.982516 CGTGCTGCTTAGAGATTTCTTCTAT 59.017 40.000 0.00 0.00 33.74 1.98
192 193 5.125578 TCGTGCTGCTTAGAGATTTCTTCTA 59.874 40.000 0.00 0.00 33.74 2.10
193 194 4.081972 TCGTGCTGCTTAGAGATTTCTTCT 60.082 41.667 0.00 0.00 37.41 2.85
194 195 4.177026 TCGTGCTGCTTAGAGATTTCTTC 58.823 43.478 0.00 0.00 34.79 2.87
195 196 4.180057 CTCGTGCTGCTTAGAGATTTCTT 58.820 43.478 11.96 0.00 34.79 2.52
196 197 3.779759 CTCGTGCTGCTTAGAGATTTCT 58.220 45.455 11.96 0.00 37.46 2.52
197 198 2.283884 GCTCGTGCTGCTTAGAGATTTC 59.716 50.000 18.42 3.00 36.03 2.17
198 199 2.275318 GCTCGTGCTGCTTAGAGATTT 58.725 47.619 18.42 0.00 36.03 2.17
199 200 1.933247 GCTCGTGCTGCTTAGAGATT 58.067 50.000 18.42 0.00 36.03 2.40
200 201 3.657956 GCTCGTGCTGCTTAGAGAT 57.342 52.632 18.42 0.00 36.03 2.75
211 212 0.595310 GAATCCGGAGTAGCTCGTGC 60.595 60.000 11.34 0.07 40.05 5.34
212 213 1.002251 GAGAATCCGGAGTAGCTCGTG 60.002 57.143 11.34 0.00 0.00 4.35
213 214 1.310904 GAGAATCCGGAGTAGCTCGT 58.689 55.000 11.34 0.00 0.00 4.18
214 215 1.309950 TGAGAATCCGGAGTAGCTCG 58.690 55.000 11.34 0.00 0.00 5.03
215 216 2.230266 GGATGAGAATCCGGAGTAGCTC 59.770 54.545 11.34 11.96 0.00 4.09
216 217 2.243810 GGATGAGAATCCGGAGTAGCT 58.756 52.381 11.34 0.50 0.00 3.32
217 218 2.734276 GGATGAGAATCCGGAGTAGC 57.266 55.000 11.34 3.14 0.00 3.58
225 226 7.012327 TGTTGATCAAATTACGGATGAGAATCC 59.988 37.037 10.35 0.00 37.36 3.01
226 227 7.919690 TGTTGATCAAATTACGGATGAGAATC 58.080 34.615 10.35 0.00 0.00 2.52
227 228 7.864108 TGTTGATCAAATTACGGATGAGAAT 57.136 32.000 10.35 0.00 0.00 2.40
228 229 7.680442 TTGTTGATCAAATTACGGATGAGAA 57.320 32.000 10.35 0.00 32.64 2.87
229 230 7.680442 TTTGTTGATCAAATTACGGATGAGA 57.320 32.000 10.35 0.00 40.56 3.27
230 231 8.915871 ATTTTGTTGATCAAATTACGGATGAG 57.084 30.769 10.35 0.00 44.15 2.90
278 279 9.730705 TGATTGAAGATGAGTAGATTGAAAGTT 57.269 29.630 0.00 0.00 0.00 2.66
279 280 9.902684 ATGATTGAAGATGAGTAGATTGAAAGT 57.097 29.630 0.00 0.00 0.00 2.66
281 282 9.117183 CCATGATTGAAGATGAGTAGATTGAAA 57.883 33.333 0.00 0.00 0.00 2.69
282 283 8.270030 ACCATGATTGAAGATGAGTAGATTGAA 58.730 33.333 0.00 0.00 0.00 2.69
283 284 7.799081 ACCATGATTGAAGATGAGTAGATTGA 58.201 34.615 0.00 0.00 0.00 2.57
284 285 9.205719 CTACCATGATTGAAGATGAGTAGATTG 57.794 37.037 0.00 0.00 31.62 2.67
285 286 8.932610 ACTACCATGATTGAAGATGAGTAGATT 58.067 33.333 14.95 0.00 32.88 2.40
286 287 8.489676 ACTACCATGATTGAAGATGAGTAGAT 57.510 34.615 14.95 0.00 32.88 1.98
287 288 7.904558 ACTACCATGATTGAAGATGAGTAGA 57.095 36.000 14.95 0.00 32.88 2.59
288 289 8.633561 TGTACTACCATGATTGAAGATGAGTAG 58.366 37.037 0.00 0.00 33.76 2.57
289 290 8.533569 TGTACTACCATGATTGAAGATGAGTA 57.466 34.615 0.00 0.00 0.00 2.59
290 291 7.423844 TGTACTACCATGATTGAAGATGAGT 57.576 36.000 0.00 0.00 0.00 3.41
291 292 8.771766 CATTGTACTACCATGATTGAAGATGAG 58.228 37.037 0.00 0.00 0.00 2.90
292 293 8.485392 TCATTGTACTACCATGATTGAAGATGA 58.515 33.333 0.00 0.00 0.00 2.92
293 294 8.667076 TCATTGTACTACCATGATTGAAGATG 57.333 34.615 0.00 0.00 0.00 2.90
294 295 9.113838 GTTCATTGTACTACCATGATTGAAGAT 57.886 33.333 4.27 0.00 0.00 2.40
295 296 8.100164 TGTTCATTGTACTACCATGATTGAAGA 58.900 33.333 4.27 0.00 0.00 2.87
296 297 8.177663 GTGTTCATTGTACTACCATGATTGAAG 58.822 37.037 4.27 0.00 0.00 3.02
297 298 7.882791 AGTGTTCATTGTACTACCATGATTGAA 59.117 33.333 4.27 0.00 0.00 2.69
298 299 7.394016 AGTGTTCATTGTACTACCATGATTGA 58.606 34.615 4.27 0.00 0.00 2.57
299 300 7.464577 CGAGTGTTCATTGTACTACCATGATTG 60.465 40.741 4.27 0.00 0.00 2.67
300 301 6.535150 CGAGTGTTCATTGTACTACCATGATT 59.465 38.462 4.27 0.00 0.00 2.57
301 302 6.042777 CGAGTGTTCATTGTACTACCATGAT 58.957 40.000 4.27 0.00 0.00 2.45
302 303 5.184287 TCGAGTGTTCATTGTACTACCATGA 59.816 40.000 0.00 0.00 0.00 3.07
303 304 5.407502 TCGAGTGTTCATTGTACTACCATG 58.592 41.667 0.00 0.00 0.00 3.66
304 305 5.654603 TCGAGTGTTCATTGTACTACCAT 57.345 39.130 0.00 0.00 0.00 3.55
305 306 5.456548 TTCGAGTGTTCATTGTACTACCA 57.543 39.130 0.00 0.00 0.00 3.25
306 307 6.963049 ATTTCGAGTGTTCATTGTACTACC 57.037 37.500 0.00 0.00 0.00 3.18
331 332 9.490379 GTCTACGGATCTGGATGTAATTTTTAT 57.510 33.333 6.47 0.00 0.00 1.40
332 333 7.929785 GGTCTACGGATCTGGATGTAATTTTTA 59.070 37.037 6.47 0.00 0.00 1.52
333 334 6.766467 GGTCTACGGATCTGGATGTAATTTTT 59.234 38.462 6.47 0.00 0.00 1.94
334 335 6.126883 TGGTCTACGGATCTGGATGTAATTTT 60.127 38.462 6.47 0.00 0.00 1.82
335 336 5.365605 TGGTCTACGGATCTGGATGTAATTT 59.634 40.000 6.47 0.00 0.00 1.82
336 337 4.899457 TGGTCTACGGATCTGGATGTAATT 59.101 41.667 6.47 0.00 0.00 1.40
337 338 4.281182 GTGGTCTACGGATCTGGATGTAAT 59.719 45.833 6.47 0.00 0.00 1.89
338 339 3.635373 GTGGTCTACGGATCTGGATGTAA 59.365 47.826 6.47 0.00 0.00 2.41
339 340 3.220110 GTGGTCTACGGATCTGGATGTA 58.780 50.000 6.47 0.00 0.00 2.29
340 341 2.032620 GTGGTCTACGGATCTGGATGT 58.967 52.381 6.47 0.00 0.00 3.06
341 342 1.341531 GGTGGTCTACGGATCTGGATG 59.658 57.143 6.47 0.00 0.00 3.51
342 343 1.218196 AGGTGGTCTACGGATCTGGAT 59.782 52.381 6.47 0.00 0.00 3.41
343 344 0.629596 AGGTGGTCTACGGATCTGGA 59.370 55.000 6.47 0.00 0.00 3.86
344 345 2.359981 TAGGTGGTCTACGGATCTGG 57.640 55.000 6.47 0.00 0.00 3.86
345 346 2.484651 CGATAGGTGGTCTACGGATCTG 59.515 54.545 0.00 0.00 0.00 2.90
346 347 2.371179 TCGATAGGTGGTCTACGGATCT 59.629 50.000 0.00 0.00 0.00 2.75
347 348 2.483491 GTCGATAGGTGGTCTACGGATC 59.517 54.545 0.00 0.00 0.00 3.36
348 349 2.502295 GTCGATAGGTGGTCTACGGAT 58.498 52.381 0.00 0.00 0.00 4.18
349 350 1.807755 CGTCGATAGGTGGTCTACGGA 60.808 57.143 0.00 0.00 32.98 4.69
350 351 0.585357 CGTCGATAGGTGGTCTACGG 59.415 60.000 0.00 0.00 32.98 4.02
351 352 1.260033 GTCGTCGATAGGTGGTCTACG 59.740 57.143 0.00 0.00 36.48 3.51
352 353 2.559440 AGTCGTCGATAGGTGGTCTAC 58.441 52.381 0.00 0.00 0.00 2.59
353 354 2.996249 AGTCGTCGATAGGTGGTCTA 57.004 50.000 0.00 0.00 0.00 2.59
354 355 2.093288 TGTAGTCGTCGATAGGTGGTCT 60.093 50.000 0.00 0.00 0.00 3.85
355 356 2.283298 TGTAGTCGTCGATAGGTGGTC 58.717 52.381 0.00 0.00 0.00 4.02
356 357 2.408271 TGTAGTCGTCGATAGGTGGT 57.592 50.000 0.00 0.00 0.00 4.16
357 358 3.119743 TGTTTGTAGTCGTCGATAGGTGG 60.120 47.826 0.00 0.00 0.00 4.61
358 359 3.850273 GTGTTTGTAGTCGTCGATAGGTG 59.150 47.826 0.00 0.00 0.00 4.00
359 360 3.755378 AGTGTTTGTAGTCGTCGATAGGT 59.245 43.478 0.00 0.00 0.00 3.08
360 361 4.096311 CAGTGTTTGTAGTCGTCGATAGG 58.904 47.826 0.00 0.00 0.00 2.57
361 362 4.966249 TCAGTGTTTGTAGTCGTCGATAG 58.034 43.478 0.00 0.00 0.00 2.08
362 363 5.361135 TTCAGTGTTTGTAGTCGTCGATA 57.639 39.130 0.00 0.00 0.00 2.92
363 364 3.909776 TCAGTGTTTGTAGTCGTCGAT 57.090 42.857 0.00 0.00 0.00 3.59
364 365 3.624900 CTTCAGTGTTTGTAGTCGTCGA 58.375 45.455 0.00 0.00 0.00 4.20
365 366 2.153247 GCTTCAGTGTTTGTAGTCGTCG 59.847 50.000 0.00 0.00 0.00 5.12
366 367 2.153247 CGCTTCAGTGTTTGTAGTCGTC 59.847 50.000 0.00 0.00 0.00 4.20
367 368 2.124903 CGCTTCAGTGTTTGTAGTCGT 58.875 47.619 0.00 0.00 0.00 4.34
368 369 2.390938 TCGCTTCAGTGTTTGTAGTCG 58.609 47.619 0.00 0.00 0.00 4.18
369 370 2.155924 GCTCGCTTCAGTGTTTGTAGTC 59.844 50.000 0.00 0.00 0.00 2.59
370 371 2.135933 GCTCGCTTCAGTGTTTGTAGT 58.864 47.619 0.00 0.00 0.00 2.73
371 372 1.461127 GGCTCGCTTCAGTGTTTGTAG 59.539 52.381 0.00 0.00 0.00 2.74
372 373 1.508632 GGCTCGCTTCAGTGTTTGTA 58.491 50.000 0.00 0.00 0.00 2.41
373 374 1.498865 CGGCTCGCTTCAGTGTTTGT 61.499 55.000 0.00 0.00 0.00 2.83
374 375 1.205064 CGGCTCGCTTCAGTGTTTG 59.795 57.895 0.00 0.00 0.00 2.93
375 376 0.531974 TTCGGCTCGCTTCAGTGTTT 60.532 50.000 0.00 0.00 0.00 2.83
376 377 0.946221 CTTCGGCTCGCTTCAGTGTT 60.946 55.000 0.00 0.00 0.00 3.32
377 378 1.373497 CTTCGGCTCGCTTCAGTGT 60.373 57.895 0.00 0.00 0.00 3.55
378 379 1.080501 TCTTCGGCTCGCTTCAGTG 60.081 57.895 0.00 0.00 0.00 3.66
379 380 1.080434 GTCTTCGGCTCGCTTCAGT 60.080 57.895 0.00 0.00 0.00 3.41
380 381 2.155194 CGTCTTCGGCTCGCTTCAG 61.155 63.158 0.00 0.00 0.00 3.02
381 382 2.126463 CGTCTTCGGCTCGCTTCA 60.126 61.111 0.00 0.00 0.00 3.02
382 383 0.455633 TAACGTCTTCGGCTCGCTTC 60.456 55.000 0.00 0.00 41.85 3.86
383 384 0.456312 CTAACGTCTTCGGCTCGCTT 60.456 55.000 0.00 0.00 41.85 4.68
384 385 1.136984 CTAACGTCTTCGGCTCGCT 59.863 57.895 0.00 0.00 41.85 4.93
385 386 0.731855 AACTAACGTCTTCGGCTCGC 60.732 55.000 0.00 0.00 41.85 5.03
386 387 2.172365 GTAACTAACGTCTTCGGCTCG 58.828 52.381 0.00 0.00 41.85 5.03
387 388 3.207474 TGTAACTAACGTCTTCGGCTC 57.793 47.619 0.00 0.00 41.85 4.70
388 389 3.057033 ACATGTAACTAACGTCTTCGGCT 60.057 43.478 0.00 0.00 41.85 5.52
389 390 3.248266 ACATGTAACTAACGTCTTCGGC 58.752 45.455 0.00 0.00 41.85 5.54
390 391 4.029861 CGAACATGTAACTAACGTCTTCGG 59.970 45.833 0.00 0.00 40.04 4.30
391 392 4.029861 CCGAACATGTAACTAACGTCTTCG 59.970 45.833 0.00 0.00 42.05 3.79
392 393 5.156355 TCCGAACATGTAACTAACGTCTTC 58.844 41.667 0.00 0.00 0.00 2.87
393 394 5.125100 TCCGAACATGTAACTAACGTCTT 57.875 39.130 0.00 0.00 0.00 3.01
394 395 4.771590 TCCGAACATGTAACTAACGTCT 57.228 40.909 0.00 0.00 0.00 4.18
395 396 5.827568 TTTCCGAACATGTAACTAACGTC 57.172 39.130 0.00 0.00 0.00 4.34
396 397 6.601741 TTTTTCCGAACATGTAACTAACGT 57.398 33.333 0.00 0.00 0.00 3.99
425 426 8.454652 AAGCTTCTCTTGAATGGTGAATCCAAT 61.455 37.037 0.00 0.00 40.78 3.16
426 427 7.198589 AAGCTTCTCTTGAATGGTGAATCCAA 61.199 38.462 0.00 0.00 40.78 3.53
427 428 5.749928 AAGCTTCTCTTGAATGGTGAATCCA 60.750 40.000 0.00 0.00 41.28 3.41
428 429 4.268359 AGCTTCTCTTGAATGGTGAATCC 58.732 43.478 0.00 0.00 0.00 3.01
429 430 5.647225 AGAAGCTTCTCTTGAATGGTGAATC 59.353 40.000 23.49 0.00 34.56 2.52
430 431 5.568392 AGAAGCTTCTCTTGAATGGTGAAT 58.432 37.500 23.49 0.00 34.56 2.57
431 432 4.978099 AGAAGCTTCTCTTGAATGGTGAA 58.022 39.130 23.49 0.00 34.56 3.18
432 433 4.630644 AGAAGCTTCTCTTGAATGGTGA 57.369 40.909 23.49 0.00 34.56 4.02
433 434 6.111382 TCATAGAAGCTTCTCTTGAATGGTG 58.889 40.000 31.67 16.06 38.70 4.17
434 435 6.305272 TCATAGAAGCTTCTCTTGAATGGT 57.695 37.500 31.67 7.48 38.70 3.55
435 436 6.766944 ACATCATAGAAGCTTCTCTTGAATGG 59.233 38.462 31.67 24.98 38.70 3.16
436 437 7.789273 ACATCATAGAAGCTTCTCTTGAATG 57.211 36.000 31.67 27.64 38.70 2.67
438 439 9.539825 GAATACATCATAGAAGCTTCTCTTGAA 57.460 33.333 31.67 19.36 38.70 2.69
439 440 8.147058 GGAATACATCATAGAAGCTTCTCTTGA 58.853 37.037 31.67 30.41 38.70 3.02
440 441 7.387397 GGGAATACATCATAGAAGCTTCTCTTG 59.613 40.741 31.67 26.92 38.70 3.02
441 442 7.292120 AGGGAATACATCATAGAAGCTTCTCTT 59.708 37.037 31.67 17.93 38.70 2.85
442 443 6.786959 AGGGAATACATCATAGAAGCTTCTCT 59.213 38.462 31.67 20.02 38.70 3.10
443 444 7.003402 AGGGAATACATCATAGAAGCTTCTC 57.997 40.000 31.67 13.57 38.70 2.87
444 445 6.786959 AGAGGGAATACATCATAGAAGCTTCT 59.213 38.462 30.63 30.63 41.24 2.85
445 446 6.873076 CAGAGGGAATACATCATAGAAGCTTC 59.127 42.308 19.11 19.11 0.00 3.86
446 447 6.328672 ACAGAGGGAATACATCATAGAAGCTT 59.671 38.462 0.00 0.00 0.00 3.74
447 448 5.843421 ACAGAGGGAATACATCATAGAAGCT 59.157 40.000 0.00 0.00 0.00 3.74
448 449 6.107901 ACAGAGGGAATACATCATAGAAGC 57.892 41.667 0.00 0.00 0.00 3.86
449 450 9.703892 CTTTACAGAGGGAATACATCATAGAAG 57.296 37.037 0.00 0.00 0.00 2.85
450 451 9.434275 TCTTTACAGAGGGAATACATCATAGAA 57.566 33.333 0.00 0.00 0.00 2.10
451 452 9.434275 TTCTTTACAGAGGGAATACATCATAGA 57.566 33.333 0.00 0.00 0.00 1.98
461 462 8.435982 CCTCTCATATTTCTTTACAGAGGGAAT 58.564 37.037 4.42 0.00 41.29 3.01
462 463 7.796054 CCTCTCATATTTCTTTACAGAGGGAA 58.204 38.462 4.42 0.00 41.29 3.97
463 464 7.366847 CCTCTCATATTTCTTTACAGAGGGA 57.633 40.000 4.42 0.00 41.29 4.20
465 466 7.366847 TCCCTCTCATATTTCTTTACAGAGG 57.633 40.000 5.27 5.27 43.60 3.69
466 467 9.844257 AAATCCCTCTCATATTTCTTTACAGAG 57.156 33.333 0.00 0.00 0.00 3.35
467 468 9.618890 CAAATCCCTCTCATATTTCTTTACAGA 57.381 33.333 0.00 0.00 0.00 3.41
468 469 8.844244 CCAAATCCCTCTCATATTTCTTTACAG 58.156 37.037 0.00 0.00 0.00 2.74
469 470 8.336235 ACCAAATCCCTCTCATATTTCTTTACA 58.664 33.333 0.00 0.00 0.00 2.41
470 471 8.753497 ACCAAATCCCTCTCATATTTCTTTAC 57.247 34.615 0.00 0.00 0.00 2.01
471 472 8.556589 TGACCAAATCCCTCTCATATTTCTTTA 58.443 33.333 0.00 0.00 0.00 1.85
472 473 7.340487 GTGACCAAATCCCTCTCATATTTCTTT 59.660 37.037 0.00 0.00 0.00 2.52
473 474 6.830838 GTGACCAAATCCCTCTCATATTTCTT 59.169 38.462 0.00 0.00 0.00 2.52
474 475 6.159398 AGTGACCAAATCCCTCTCATATTTCT 59.841 38.462 0.00 0.00 0.00 2.52
475 476 6.360618 AGTGACCAAATCCCTCTCATATTTC 58.639 40.000 0.00 0.00 0.00 2.17
476 477 6.332976 AGTGACCAAATCCCTCTCATATTT 57.667 37.500 0.00 0.00 0.00 1.40
477 478 5.983333 AGTGACCAAATCCCTCTCATATT 57.017 39.130 0.00 0.00 0.00 1.28
478 479 7.451731 TTTAGTGACCAAATCCCTCTCATAT 57.548 36.000 0.00 0.00 0.00 1.78
479 480 6.884472 TTTAGTGACCAAATCCCTCTCATA 57.116 37.500 0.00 0.00 0.00 2.15
480 481 5.779241 TTTAGTGACCAAATCCCTCTCAT 57.221 39.130 0.00 0.00 0.00 2.90
481 482 5.576563 TTTTAGTGACCAAATCCCTCTCA 57.423 39.130 0.00 0.00 0.00 3.27
482 483 7.339482 ACTATTTTAGTGACCAAATCCCTCTC 58.661 38.462 0.00 0.00 37.69 3.20
483 484 7.272144 ACTATTTTAGTGACCAAATCCCTCT 57.728 36.000 0.00 0.00 37.69 3.69
537 538 9.921637 GACCTTGACCATTAATTGATTAACAAA 57.078 29.630 0.00 0.00 42.03 2.83
538 539 9.308000 AGACCTTGACCATTAATTGATTAACAA 57.692 29.630 0.00 0.00 42.95 2.83
539 540 8.877864 AGACCTTGACCATTAATTGATTAACA 57.122 30.769 0.00 0.00 35.31 2.41
542 543 9.527157 TGAAAGACCTTGACCATTAATTGATTA 57.473 29.630 0.00 0.00 0.00 1.75
543 544 8.306761 GTGAAAGACCTTGACCATTAATTGATT 58.693 33.333 0.00 0.00 0.00 2.57
544 545 7.671398 AGTGAAAGACCTTGACCATTAATTGAT 59.329 33.333 0.00 0.00 0.00 2.57
545 546 7.004086 AGTGAAAGACCTTGACCATTAATTGA 58.996 34.615 0.00 0.00 0.00 2.57
546 547 7.219484 AGTGAAAGACCTTGACCATTAATTG 57.781 36.000 0.00 0.00 0.00 2.32
547 548 8.934023 TTAGTGAAAGACCTTGACCATTAATT 57.066 30.769 0.00 0.00 0.00 1.40
550 551 9.613428 CATATTAGTGAAAGACCTTGACCATTA 57.387 33.333 0.00 0.00 0.00 1.90
551 552 7.067494 GCATATTAGTGAAAGACCTTGACCATT 59.933 37.037 0.00 0.00 0.00 3.16
552 553 6.543831 GCATATTAGTGAAAGACCTTGACCAT 59.456 38.462 0.00 0.00 0.00 3.55
553 554 5.880332 GCATATTAGTGAAAGACCTTGACCA 59.120 40.000 0.00 0.00 0.00 4.02
554 555 6.116126 AGCATATTAGTGAAAGACCTTGACC 58.884 40.000 0.00 0.00 0.00 4.02
555 556 6.258947 GGAGCATATTAGTGAAAGACCTTGAC 59.741 42.308 0.00 0.00 0.00 3.18
556 557 6.349300 GGAGCATATTAGTGAAAGACCTTGA 58.651 40.000 0.00 0.00 0.00 3.02
557 558 5.529060 GGGAGCATATTAGTGAAAGACCTTG 59.471 44.000 0.00 0.00 0.00 3.61
558 559 5.191722 TGGGAGCATATTAGTGAAAGACCTT 59.808 40.000 0.00 0.00 0.00 3.50
559 560 4.721776 TGGGAGCATATTAGTGAAAGACCT 59.278 41.667 0.00 0.00 0.00 3.85
560 561 5.036117 TGGGAGCATATTAGTGAAAGACC 57.964 43.478 0.00 0.00 0.00 3.85
561 562 5.471456 CCATGGGAGCATATTAGTGAAAGAC 59.529 44.000 2.85 0.00 0.00 3.01
562 563 5.624159 CCATGGGAGCATATTAGTGAAAGA 58.376 41.667 2.85 0.00 0.00 2.52
563 564 4.217118 GCCATGGGAGCATATTAGTGAAAG 59.783 45.833 15.13 0.00 0.00 2.62
564 565 4.144297 GCCATGGGAGCATATTAGTGAAA 58.856 43.478 15.13 0.00 0.00 2.69
565 566 3.498481 GGCCATGGGAGCATATTAGTGAA 60.498 47.826 15.13 0.00 0.00 3.18
566 567 2.040278 GGCCATGGGAGCATATTAGTGA 59.960 50.000 15.13 0.00 0.00 3.41
567 568 2.440409 GGCCATGGGAGCATATTAGTG 58.560 52.381 15.13 0.00 0.00 2.74
568 569 1.355720 GGGCCATGGGAGCATATTAGT 59.644 52.381 15.13 0.00 0.00 2.24
569 570 1.341383 GGGGCCATGGGAGCATATTAG 60.341 57.143 15.13 0.00 0.00 1.73
570 571 0.704076 GGGGCCATGGGAGCATATTA 59.296 55.000 15.13 0.00 0.00 0.98
571 572 1.370651 TGGGGCCATGGGAGCATATT 61.371 55.000 15.13 0.00 0.00 1.28
572 573 1.370651 TTGGGGCCATGGGAGCATAT 61.371 55.000 15.13 0.00 0.00 1.78
573 574 1.370651 ATTGGGGCCATGGGAGCATA 61.371 55.000 15.13 0.00 0.00 3.14
574 575 2.260316 AATTGGGGCCATGGGAGCAT 62.260 55.000 15.13 0.00 0.00 3.79
575 576 2.474133 AAATTGGGGCCATGGGAGCA 62.474 55.000 15.13 0.00 0.00 4.26
576 577 1.690283 AAATTGGGGCCATGGGAGC 60.690 57.895 15.13 0.00 0.00 4.70
577 578 0.325484 TCAAATTGGGGCCATGGGAG 60.325 55.000 15.13 0.00 0.00 4.30
578 579 0.117943 TTCAAATTGGGGCCATGGGA 59.882 50.000 15.13 0.00 0.00 4.37
579 580 0.990374 TTTCAAATTGGGGCCATGGG 59.010 50.000 15.13 0.00 0.00 4.00
580 581 2.875094 TTTTCAAATTGGGGCCATGG 57.125 45.000 7.63 7.63 0.00 3.66
597 598 8.262715 ACCGTTTGAAATTGATTGTTCTTTTT 57.737 26.923 0.00 0.00 0.00 1.94
598 599 7.841915 ACCGTTTGAAATTGATTGTTCTTTT 57.158 28.000 0.00 0.00 0.00 2.27
599 600 7.976734 TGTACCGTTTGAAATTGATTGTTCTTT 59.023 29.630 0.00 0.00 0.00 2.52
600 601 7.484975 TGTACCGTTTGAAATTGATTGTTCTT 58.515 30.769 0.00 0.00 0.00 2.52
601 602 7.012894 TCTGTACCGTTTGAAATTGATTGTTCT 59.987 33.333 0.00 0.00 0.00 3.01
602 603 7.136119 TCTGTACCGTTTGAAATTGATTGTTC 58.864 34.615 0.00 0.00 0.00 3.18
603 604 7.033530 TCTGTACCGTTTGAAATTGATTGTT 57.966 32.000 0.00 0.00 0.00 2.83
604 605 6.627395 TCTGTACCGTTTGAAATTGATTGT 57.373 33.333 0.00 0.00 0.00 2.71
605 606 7.922505 TTTCTGTACCGTTTGAAATTGATTG 57.077 32.000 0.00 0.00 0.00 2.67
606 607 9.191995 GATTTTCTGTACCGTTTGAAATTGATT 57.808 29.630 0.00 0.00 0.00 2.57
607 608 8.356657 TGATTTTCTGTACCGTTTGAAATTGAT 58.643 29.630 0.00 0.00 0.00 2.57
608 609 7.708051 TGATTTTCTGTACCGTTTGAAATTGA 58.292 30.769 0.00 0.00 0.00 2.57
609 610 7.922505 TGATTTTCTGTACCGTTTGAAATTG 57.077 32.000 0.00 0.00 0.00 2.32
610 611 9.541143 AAATGATTTTCTGTACCGTTTGAAATT 57.459 25.926 0.00 0.00 0.00 1.82
611 612 9.541143 AAAATGATTTTCTGTACCGTTTGAAAT 57.459 25.926 0.00 0.00 0.00 2.17
612 613 8.934507 AAAATGATTTTCTGTACCGTTTGAAA 57.065 26.923 0.00 0.00 0.00 2.69
613 614 8.934507 AAAAATGATTTTCTGTACCGTTTGAA 57.065 26.923 3.32 0.00 33.48 2.69
637 638 9.915629 AAACTACACTGTTCACATTTACAAAAA 57.084 25.926 0.00 0.00 0.00 1.94
638 639 9.915629 AAAACTACACTGTTCACATTTACAAAA 57.084 25.926 0.00 0.00 0.00 2.44
639 640 9.915629 AAAAACTACACTGTTCACATTTACAAA 57.084 25.926 0.00 0.00 0.00 2.83
674 675 8.859090 TGTGTACTTTGAATTTGGATCTGAAAT 58.141 29.630 0.00 0.00 0.00 2.17
675 676 8.231692 TGTGTACTTTGAATTTGGATCTGAAA 57.768 30.769 0.00 0.00 0.00 2.69
676 677 7.815840 TGTGTACTTTGAATTTGGATCTGAA 57.184 32.000 0.00 0.00 0.00 3.02
677 678 7.665145 TGATGTGTACTTTGAATTTGGATCTGA 59.335 33.333 0.00 0.00 0.00 3.27
678 679 7.819644 TGATGTGTACTTTGAATTTGGATCTG 58.180 34.615 0.00 0.00 0.00 2.90
679 680 8.408043 TTGATGTGTACTTTGAATTTGGATCT 57.592 30.769 0.00 0.00 0.00 2.75
680 681 8.514594 TCTTGATGTGTACTTTGAATTTGGATC 58.485 33.333 0.00 0.00 0.00 3.36
681 682 8.408043 TCTTGATGTGTACTTTGAATTTGGAT 57.592 30.769 0.00 0.00 0.00 3.41
682 683 7.815840 TCTTGATGTGTACTTTGAATTTGGA 57.184 32.000 0.00 0.00 0.00 3.53
683 684 8.755018 GTTTCTTGATGTGTACTTTGAATTTGG 58.245 33.333 0.00 0.00 0.00 3.28
684 685 9.299963 TGTTTCTTGATGTGTACTTTGAATTTG 57.700 29.630 0.00 0.00 0.00 2.32
685 686 9.868277 TTGTTTCTTGATGTGTACTTTGAATTT 57.132 25.926 0.00 0.00 0.00 1.82
686 687 9.868277 TTTGTTTCTTGATGTGTACTTTGAATT 57.132 25.926 0.00 0.00 0.00 2.17
687 688 9.868277 TTTTGTTTCTTGATGTGTACTTTGAAT 57.132 25.926 0.00 0.00 0.00 2.57
688 689 9.698309 TTTTTGTTTCTTGATGTGTACTTTGAA 57.302 25.926 0.00 0.00 0.00 2.69
711 712 8.253113 ACTGTTCACATCTTGATTTGTCTTTTT 58.747 29.630 0.00 0.00 32.84 1.94
712 713 7.703621 CACTGTTCACATCTTGATTTGTCTTTT 59.296 33.333 0.00 0.00 32.84 2.27
713 714 7.148018 ACACTGTTCACATCTTGATTTGTCTTT 60.148 33.333 0.00 0.00 32.84 2.52
714 715 6.319658 ACACTGTTCACATCTTGATTTGTCTT 59.680 34.615 0.00 0.00 32.84 3.01
715 716 5.824624 ACACTGTTCACATCTTGATTTGTCT 59.175 36.000 0.00 0.00 32.84 3.41
716 717 6.064846 ACACTGTTCACATCTTGATTTGTC 57.935 37.500 0.00 0.00 32.84 3.18
717 718 7.308770 CCATACACTGTTCACATCTTGATTTGT 60.309 37.037 0.00 0.00 32.84 2.83
718 719 7.025365 CCATACACTGTTCACATCTTGATTTG 58.975 38.462 0.00 0.00 32.84 2.32
719 720 6.151648 CCCATACACTGTTCACATCTTGATTT 59.848 38.462 0.00 0.00 32.84 2.17
720 721 5.649395 CCCATACACTGTTCACATCTTGATT 59.351 40.000 0.00 0.00 32.84 2.57
721 722 5.045651 TCCCATACACTGTTCACATCTTGAT 60.046 40.000 0.00 0.00 32.84 2.57
722 723 4.285775 TCCCATACACTGTTCACATCTTGA 59.714 41.667 0.00 0.00 0.00 3.02
723 724 4.393062 GTCCCATACACTGTTCACATCTTG 59.607 45.833 0.00 0.00 0.00 3.02
724 725 4.041567 TGTCCCATACACTGTTCACATCTT 59.958 41.667 0.00 0.00 31.43 2.40
725 726 3.582647 TGTCCCATACACTGTTCACATCT 59.417 43.478 0.00 0.00 31.43 2.90
726 727 3.937814 TGTCCCATACACTGTTCACATC 58.062 45.455 0.00 0.00 31.43 3.06
727 728 4.041567 TCTTGTCCCATACACTGTTCACAT 59.958 41.667 0.00 0.00 38.00 3.21
728 729 3.389656 TCTTGTCCCATACACTGTTCACA 59.610 43.478 0.00 0.00 38.00 3.58
729 730 3.746492 GTCTTGTCCCATACACTGTTCAC 59.254 47.826 0.00 0.00 38.00 3.18
730 731 3.389656 TGTCTTGTCCCATACACTGTTCA 59.610 43.478 0.00 0.00 38.00 3.18
731 732 4.002906 TGTCTTGTCCCATACACTGTTC 57.997 45.455 0.00 0.00 38.00 3.18
732 733 4.202461 ACATGTCTTGTCCCATACACTGTT 60.202 41.667 0.00 0.00 38.00 3.16
733 734 3.327757 ACATGTCTTGTCCCATACACTGT 59.672 43.478 0.00 0.00 38.00 3.55
734 735 3.942829 ACATGTCTTGTCCCATACACTG 58.057 45.455 0.00 0.00 38.00 3.66
735 736 4.041567 TGAACATGTCTTGTCCCATACACT 59.958 41.667 0.00 0.00 37.68 3.55
736 737 4.323417 TGAACATGTCTTGTCCCATACAC 58.677 43.478 0.00 0.00 37.68 2.90
737 738 4.041567 ACTGAACATGTCTTGTCCCATACA 59.958 41.667 0.00 0.00 37.68 2.29
738 739 4.579869 ACTGAACATGTCTTGTCCCATAC 58.420 43.478 0.00 0.00 37.68 2.39
739 740 4.323485 GGACTGAACATGTCTTGTCCCATA 60.323 45.833 22.85 0.00 41.04 2.74
740 741 3.560025 GGACTGAACATGTCTTGTCCCAT 60.560 47.826 22.85 0.00 41.04 4.00
741 742 2.224523 GGACTGAACATGTCTTGTCCCA 60.225 50.000 22.85 5.44 41.04 4.37
742 743 2.427506 GGACTGAACATGTCTTGTCCC 58.572 52.381 22.85 9.13 41.04 4.46
743 744 2.427506 GGGACTGAACATGTCTTGTCC 58.572 52.381 24.21 24.21 43.60 4.02
744 745 2.224523 TGGGGACTGAACATGTCTTGTC 60.225 50.000 0.00 7.60 37.68 3.18
745 746 1.774254 TGGGGACTGAACATGTCTTGT 59.226 47.619 0.00 0.00 41.53 3.16
746 747 2.566833 TGGGGACTGAACATGTCTTG 57.433 50.000 0.00 0.00 35.04 3.02
747 748 3.814504 AATGGGGACTGAACATGTCTT 57.185 42.857 0.00 0.00 35.04 3.01
748 749 3.200825 CCTAATGGGGACTGAACATGTCT 59.799 47.826 0.00 0.00 35.04 3.41
749 750 3.199946 TCCTAATGGGGACTGAACATGTC 59.800 47.826 0.00 0.00 35.33 3.06
750 751 3.189606 TCCTAATGGGGACTGAACATGT 58.810 45.455 0.00 0.00 35.33 3.21
751 752 3.931907 TCCTAATGGGGACTGAACATG 57.068 47.619 0.00 0.00 35.33 3.21
752 753 3.852578 ACTTCCTAATGGGGACTGAACAT 59.147 43.478 0.00 0.00 34.78 2.71
753 754 3.256704 ACTTCCTAATGGGGACTGAACA 58.743 45.455 0.00 0.00 34.78 3.18
754 755 4.302559 AACTTCCTAATGGGGACTGAAC 57.697 45.455 0.00 0.00 34.78 3.18
755 756 5.333566 AAAACTTCCTAATGGGGACTGAA 57.666 39.130 0.00 0.00 34.78 3.02
756 757 5.333566 AAAAACTTCCTAATGGGGACTGA 57.666 39.130 0.00 0.00 34.78 3.41
775 776 2.224843 GGACGAAACCTAGGGGGAAAAA 60.225 50.000 14.81 0.00 38.76 1.94
790 791 0.410663 TGGAGAACCCTAGGGACGAA 59.589 55.000 35.38 11.41 38.96 3.85
937 939 2.289565 GCCGATTCCTCCAAACCTTAG 58.710 52.381 0.00 0.00 0.00 2.18
938 940 1.631388 TGCCGATTCCTCCAAACCTTA 59.369 47.619 0.00 0.00 0.00 2.69
954 956 3.274586 CCATCAGTCGCCATGCCG 61.275 66.667 0.00 0.00 0.00 5.69
973 975 2.297597 GACTACCTGATCCGCTGCTATT 59.702 50.000 0.00 0.00 0.00 1.73
998 1000 4.414846 AGATTTTGCTGGTATCCTCCATCT 59.585 41.667 0.00 0.00 36.84 2.90
1038 1040 0.975135 CATCCGCCTCATCATCCTCT 59.025 55.000 0.00 0.00 0.00 3.69
1113 1115 2.032681 GTCAAGAGCCGGCCAAGT 59.967 61.111 26.15 3.43 0.00 3.16
1257 1259 1.470996 GGTGCATGGCCTTGTTCCAA 61.471 55.000 19.05 0.00 37.13 3.53
1278 1280 4.285790 TGGAAGTCCCAGGGCCCT 62.286 66.667 22.28 22.28 40.82 5.19
1348 1350 4.564782 TCTTCAATCTGTCCAGCTTGAT 57.435 40.909 12.74 0.00 41.43 2.57
1368 1370 7.649306 GGCAACTTATGAATTTGACACCATATC 59.351 37.037 0.00 0.00 30.10 1.63
1370 1372 6.404184 CGGCAACTTATGAATTTGACACCATA 60.404 38.462 0.00 0.00 29.05 2.74
1530 1532 2.287788 CCTCACTTGCGACATTGCTTTT 60.288 45.455 0.00 0.00 35.36 2.27
1576 1579 7.862873 GCCAACTATGTATCTTTTTCCTTATGC 59.137 37.037 0.00 0.00 0.00 3.14
1676 1685 5.668080 TGGGGTCCTTCTTTTATTTTGGTTT 59.332 36.000 0.00 0.00 0.00 3.27
1995 2012 1.071699 ACCGTGCTTTGCCTTCTCTTA 59.928 47.619 0.00 0.00 0.00 2.10
2411 2432 3.137533 GTGCCCTGAGAAAGAGATATGC 58.862 50.000 0.00 0.00 0.00 3.14
2447 2468 4.078516 GCTGGCCTACCCGACGTT 62.079 66.667 3.32 0.00 35.87 3.99
2497 2519 2.224281 CCTCTGAGTGTTGGTGCAACTA 60.224 50.000 2.04 0.00 43.85 2.24
2503 2525 0.668706 CGCTCCTCTGAGTGTTGGTG 60.669 60.000 3.66 0.00 42.87 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.