Multiple sequence alignment - TraesCS6A01G200800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G200800 chr6A 100.000 6875 0 0 1 6875 326389792 326396666 0.000000e+00 12696.0
1 TraesCS6A01G200800 chr6A 88.864 1365 103 20 2960 4293 324291659 324293005 0.000000e+00 1633.0
2 TraesCS6A01G200800 chr6A 87.298 1173 113 18 1273 2422 324286866 324288025 0.000000e+00 1308.0
3 TraesCS6A01G200800 chr6A 93.470 827 53 1 6048 6874 61854591 61855416 0.000000e+00 1227.0
4 TraesCS6A01G200800 chr6A 93.284 819 53 2 6057 6874 329962246 329963063 0.000000e+00 1206.0
5 TraesCS6A01G200800 chr6A 86.071 280 38 1 835 1114 324286588 324286866 4.030000e-77 300.0
6 TraesCS6A01G200800 chr6D 94.022 5169 188 39 683 5793 248509700 248504595 0.000000e+00 7721.0
7 TraesCS6A01G200800 chr6D 89.351 1371 93 21 2959 4293 262181391 262180038 0.000000e+00 1674.0
8 TraesCS6A01G200800 chr6D 88.917 1173 97 20 1273 2422 262186149 262184987 0.000000e+00 1415.0
9 TraesCS6A01G200800 chr6D 88.939 660 69 4 7 664 248515086 248514429 0.000000e+00 811.0
10 TraesCS6A01G200800 chr6B 93.779 2186 105 11 3609 5790 349470590 349472748 0.000000e+00 3254.0
11 TraesCS6A01G200800 chr6B 93.890 2095 84 15 683 2771 349466449 349468505 0.000000e+00 3120.0
12 TraesCS6A01G200800 chr6B 88.718 1365 108 20 2959 4293 348854622 348855970 0.000000e+00 1626.0
13 TraesCS6A01G200800 chr6B 88.340 1175 103 16 1273 2422 348852148 348853313 0.000000e+00 1380.0
14 TraesCS6A01G200800 chr6B 96.855 795 19 4 2817 3606 349468513 349469306 0.000000e+00 1325.0
15 TraesCS6A01G200800 chr6B 88.973 662 69 4 5 664 349454893 349455552 0.000000e+00 815.0
16 TraesCS6A01G200800 chr6B 89.744 351 29 4 2591 2940 348854212 348854556 6.330000e-120 442.0
17 TraesCS6A01G200800 chr3A 93.765 818 50 1 6057 6874 296948691 296949507 0.000000e+00 1227.0
18 TraesCS6A01G200800 chr3A 93.643 818 51 1 6057 6874 296958394 296959210 0.000000e+00 1221.0
19 TraesCS6A01G200800 chr3A 93.529 819 52 1 6058 6875 374986198 374987016 0.000000e+00 1218.0
20 TraesCS6A01G200800 chr1A 93.415 820 53 1 6055 6873 95982285 95983104 0.000000e+00 1214.0
21 TraesCS6A01G200800 chr1A 93.268 817 53 2 6060 6874 336168317 336169133 0.000000e+00 1203.0
22 TraesCS6A01G200800 chr2A 93.276 818 51 3 6058 6874 500548755 500547941 0.000000e+00 1203.0
23 TraesCS6A01G200800 chr2A 92.787 818 58 1 6058 6875 144997085 144997901 0.000000e+00 1182.0
24 TraesCS6A01G200800 chr2A 86.630 546 67 6 33 575 711026506 711025964 3.550000e-167 599.0
25 TraesCS6A01G200800 chr2A 88.559 236 23 4 5777 6010 185127157 185127390 4.060000e-72 283.0
26 TraesCS6A01G200800 chr2A 81.203 133 15 10 535 662 196220214 196220087 1.580000e-16 99.0
27 TraesCS6A01G200800 chrUn 97.943 389 8 0 3616 4004 480163773 480164161 0.000000e+00 675.0
28 TraesCS6A01G200800 chrUn 90.037 271 24 3 5786 6055 88829829 88829561 1.420000e-91 348.0
29 TraesCS6A01G200800 chrUn 90.037 271 24 3 5786 6055 88849718 88849450 1.420000e-91 348.0
30 TraesCS6A01G200800 chr5D 85.240 603 74 11 5 597 346431018 346431615 2.120000e-169 606.0
31 TraesCS6A01G200800 chr5A 82.292 672 104 13 3 664 89701309 89700643 1.000000e-157 568.0
32 TraesCS6A01G200800 chr5A 84.586 266 31 8 5791 6052 687958055 687957796 8.850000e-64 255.0
33 TraesCS6A01G200800 chr2D 82.938 633 101 7 36 664 222486092 222485463 1.290000e-156 564.0
34 TraesCS6A01G200800 chr2D 82.362 669 94 19 5 657 206929188 206928528 1.670000e-155 560.0
35 TraesCS6A01G200800 chr2D 82.186 668 97 15 5 657 247692692 247693352 7.790000e-154 555.0
36 TraesCS6A01G200800 chr2D 88.645 273 27 3 5784 6055 139519887 139520156 5.140000e-86 329.0
37 TraesCS6A01G200800 chr2D 88.722 266 25 4 5791 6055 54173153 54172892 3.090000e-83 320.0
38 TraesCS6A01G200800 chr2B 81.899 674 102 17 5 664 465032380 465031713 1.010000e-152 551.0
39 TraesCS6A01G200800 chr2B 83.942 274 34 9 5788 6057 90046132 90046399 3.180000e-63 254.0
40 TraesCS6A01G200800 chr4A 89.243 251 25 2 5808 6057 722421050 722421299 5.180000e-81 313.0
41 TraesCS6A01G200800 chr4A 81.720 279 45 5 5778 6055 726901632 726901359 1.930000e-55 228.0
42 TraesCS6A01G200800 chr4B 86.792 265 31 3 5792 6055 594148521 594148782 6.740000e-75 292.0
43 TraesCS6A01G200800 chr7D 84.375 64 10 0 5397 5460 186244917 186244854 5.760000e-06 63.9
44 TraesCS6A01G200800 chr7B 84.375 64 10 0 5397 5460 328969833 328969770 5.760000e-06 63.9
45 TraesCS6A01G200800 chr7A 84.375 64 10 0 5397 5460 194054826 194054763 5.760000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G200800 chr6A 326389792 326396666 6874 False 12696.000000 12696 100.000000 1 6875 1 chr6A.!!$F2 6874
1 TraesCS6A01G200800 chr6A 61854591 61855416 825 False 1227.000000 1227 93.470000 6048 6874 1 chr6A.!!$F1 826
2 TraesCS6A01G200800 chr6A 329962246 329963063 817 False 1206.000000 1206 93.284000 6057 6874 1 chr6A.!!$F3 817
3 TraesCS6A01G200800 chr6A 324286588 324293005 6417 False 1080.333333 1633 87.411000 835 4293 3 chr6A.!!$F4 3458
4 TraesCS6A01G200800 chr6D 248504595 248509700 5105 True 7721.000000 7721 94.022000 683 5793 1 chr6D.!!$R1 5110
5 TraesCS6A01G200800 chr6D 262180038 262186149 6111 True 1544.500000 1674 89.134000 1273 4293 2 chr6D.!!$R3 3020
6 TraesCS6A01G200800 chr6D 248514429 248515086 657 True 811.000000 811 88.939000 7 664 1 chr6D.!!$R2 657
7 TraesCS6A01G200800 chr6B 349466449 349472748 6299 False 2566.333333 3254 94.841333 683 5790 3 chr6B.!!$F3 5107
8 TraesCS6A01G200800 chr6B 348852148 348855970 3822 False 1149.333333 1626 88.934000 1273 4293 3 chr6B.!!$F2 3020
9 TraesCS6A01G200800 chr6B 349454893 349455552 659 False 815.000000 815 88.973000 5 664 1 chr6B.!!$F1 659
10 TraesCS6A01G200800 chr3A 296948691 296949507 816 False 1227.000000 1227 93.765000 6057 6874 1 chr3A.!!$F1 817
11 TraesCS6A01G200800 chr3A 296958394 296959210 816 False 1221.000000 1221 93.643000 6057 6874 1 chr3A.!!$F2 817
12 TraesCS6A01G200800 chr3A 374986198 374987016 818 False 1218.000000 1218 93.529000 6058 6875 1 chr3A.!!$F3 817
13 TraesCS6A01G200800 chr1A 95982285 95983104 819 False 1214.000000 1214 93.415000 6055 6873 1 chr1A.!!$F1 818
14 TraesCS6A01G200800 chr1A 336168317 336169133 816 False 1203.000000 1203 93.268000 6060 6874 1 chr1A.!!$F2 814
15 TraesCS6A01G200800 chr2A 500547941 500548755 814 True 1203.000000 1203 93.276000 6058 6874 1 chr2A.!!$R2 816
16 TraesCS6A01G200800 chr2A 144997085 144997901 816 False 1182.000000 1182 92.787000 6058 6875 1 chr2A.!!$F1 817
17 TraesCS6A01G200800 chr2A 711025964 711026506 542 True 599.000000 599 86.630000 33 575 1 chr2A.!!$R3 542
18 TraesCS6A01G200800 chr5D 346431018 346431615 597 False 606.000000 606 85.240000 5 597 1 chr5D.!!$F1 592
19 TraesCS6A01G200800 chr5A 89700643 89701309 666 True 568.000000 568 82.292000 3 664 1 chr5A.!!$R1 661
20 TraesCS6A01G200800 chr2D 222485463 222486092 629 True 564.000000 564 82.938000 36 664 1 chr2D.!!$R3 628
21 TraesCS6A01G200800 chr2D 206928528 206929188 660 True 560.000000 560 82.362000 5 657 1 chr2D.!!$R2 652
22 TraesCS6A01G200800 chr2D 247692692 247693352 660 False 555.000000 555 82.186000 5 657 1 chr2D.!!$F2 652
23 TraesCS6A01G200800 chr2B 465031713 465032380 667 True 551.000000 551 81.899000 5 664 1 chr2B.!!$R1 659

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 283 0.179163 GAAAAAGCAATCCCGGAGCG 60.179 55.000 0.73 0.0 0.00 5.03 F
1125 1163 0.320421 AGGTTGGTGACGATCCGTTG 60.320 55.000 0.00 0.0 41.37 4.10 F
1258 1296 1.405821 AGTCCTAGCGATTCAAGGTCG 59.594 52.381 0.00 0.0 41.77 4.79 F
2948 6104 0.973632 TTCTTGGAAGCCTGCTCGTA 59.026 50.000 0.00 0.0 0.00 3.43 F
3983 8504 0.311790 ACTTGGCATTTGTCGCACAG 59.688 50.000 0.00 0.0 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1837 1905 1.897802 CTGATTTGCTGGCTCCCTTTT 59.102 47.619 0.00 0.0 0.00 2.27 R
2713 5864 1.079405 GGACGAGGCCGATGACAAA 60.079 57.895 0.00 0.0 39.50 2.83 R
2992 6197 5.467668 AGTACCCGATATCCCATCAGATA 57.532 43.478 0.00 0.0 33.38 1.98 R
4264 8792 0.527817 CGGAGTATCTTGGACGGCAC 60.528 60.000 0.00 0.0 33.73 5.01 R
5955 10528 0.178955 GGAGTCTAGGGCCCTAGTCC 60.179 65.000 44.13 39.7 44.59 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.717436 TCATGAGTACTCATCTGAAGTACTAGG 59.283 40.741 31.17 17.11 46.57 3.02
31 37 7.635648 AGTACTCATCTGAAGTACTAGGAAGT 58.364 38.462 16.68 0.00 44.54 3.01
246 266 3.493334 TCCTTTCTCGACTACCTGTGAA 58.507 45.455 0.00 0.00 0.00 3.18
263 283 0.179163 GAAAAAGCAATCCCGGAGCG 60.179 55.000 0.73 0.00 0.00 5.03
296 317 7.835682 TCCATTTCACATCTCAATATCCAGTTT 59.164 33.333 0.00 0.00 0.00 2.66
343 364 1.399791 CTAGGTCGTCCTGTTACCGTC 59.600 57.143 11.77 0.00 44.81 4.79
402 423 0.321298 GCACCACATTACCCGACACT 60.321 55.000 0.00 0.00 0.00 3.55
412 434 0.608640 ACCCGACACTCTCAATCACC 59.391 55.000 0.00 0.00 0.00 4.02
431 453 2.978010 CTGGCCGGACACGCTTTT 60.978 61.111 5.41 0.00 39.22 2.27
476 498 3.260884 AGATCAACACGTCACAACCCTAT 59.739 43.478 0.00 0.00 0.00 2.57
502 524 0.836606 TCAACAGAGAGGCCAACACA 59.163 50.000 5.01 0.00 0.00 3.72
506 528 1.837051 AGAGAGGCCAACACACCGA 60.837 57.895 5.01 0.00 0.00 4.69
526 548 3.612717 CGATCTACATCCTAAGCACGCAT 60.613 47.826 0.00 0.00 0.00 4.73
582 606 1.038681 TTGCGTGGACGGCTAGGATA 61.039 55.000 0.00 0.00 40.23 2.59
603 627 2.208872 AGTCCTGGCAACCTCCATTAT 58.791 47.619 0.00 0.00 35.22 1.28
608 632 4.476846 TCCTGGCAACCTCCATTATAAAGA 59.523 41.667 0.00 0.00 35.22 2.52
632 656 1.071814 GCTTTACGTGGACCACCCA 59.928 57.895 19.11 3.83 44.25 4.51
657 681 2.356313 CCGCTCAGTGCTGACGTT 60.356 61.111 16.51 0.00 40.11 3.99
658 682 1.956170 CCGCTCAGTGCTGACGTTT 60.956 57.895 16.51 0.00 40.11 3.60
659 683 1.202568 CGCTCAGTGCTGACGTTTG 59.797 57.895 12.52 0.00 40.11 2.93
660 684 1.215014 CGCTCAGTGCTGACGTTTGA 61.215 55.000 12.52 0.00 40.11 2.69
661 685 0.937304 GCTCAGTGCTGACGTTTGAA 59.063 50.000 0.00 0.00 38.95 2.69
662 686 1.330521 GCTCAGTGCTGACGTTTGAAA 59.669 47.619 0.00 0.00 38.95 2.69
663 687 2.223249 GCTCAGTGCTGACGTTTGAAAA 60.223 45.455 0.00 0.00 38.95 2.29
664 688 3.548818 GCTCAGTGCTGACGTTTGAAAAT 60.549 43.478 0.00 0.00 38.95 1.82
665 689 4.209452 TCAGTGCTGACGTTTGAAAATC 57.791 40.909 0.00 0.00 34.14 2.17
666 690 3.625313 TCAGTGCTGACGTTTGAAAATCA 59.375 39.130 0.00 0.00 34.14 2.57
667 691 3.725740 CAGTGCTGACGTTTGAAAATCAC 59.274 43.478 0.00 0.00 0.00 3.06
668 692 3.376859 AGTGCTGACGTTTGAAAATCACA 59.623 39.130 0.00 0.00 0.00 3.58
669 693 3.725740 GTGCTGACGTTTGAAAATCACAG 59.274 43.478 0.00 0.00 0.00 3.66
670 694 3.625313 TGCTGACGTTTGAAAATCACAGA 59.375 39.130 0.00 0.00 0.00 3.41
671 695 4.095632 TGCTGACGTTTGAAAATCACAGAA 59.904 37.500 0.00 0.00 0.00 3.02
672 696 5.034152 GCTGACGTTTGAAAATCACAGAAA 58.966 37.500 0.00 0.00 0.00 2.52
673 697 5.514914 GCTGACGTTTGAAAATCACAGAAAA 59.485 36.000 0.00 0.00 0.00 2.29
674 698 6.034470 GCTGACGTTTGAAAATCACAGAAAAA 59.966 34.615 0.00 0.00 0.00 1.94
675 699 7.254084 GCTGACGTTTGAAAATCACAGAAAAAT 60.254 33.333 0.00 0.00 0.00 1.82
676 700 8.114359 TGACGTTTGAAAATCACAGAAAAATC 57.886 30.769 0.00 0.00 0.00 2.17
677 701 7.973388 TGACGTTTGAAAATCACAGAAAAATCT 59.027 29.630 0.00 0.00 0.00 2.40
678 702 8.702163 ACGTTTGAAAATCACAGAAAAATCTT 57.298 26.923 0.00 0.00 0.00 2.40
679 703 8.807581 ACGTTTGAAAATCACAGAAAAATCTTC 58.192 29.630 0.00 0.00 0.00 2.87
680 704 9.023967 CGTTTGAAAATCACAGAAAAATCTTCT 57.976 29.630 0.00 0.00 0.00 2.85
685 709 9.833182 GAAAATCACAGAAAAATCTTCTACTCC 57.167 33.333 0.00 0.00 0.00 3.85
686 710 8.924511 AAATCACAGAAAAATCTTCTACTCCA 57.075 30.769 0.00 0.00 0.00 3.86
687 711 7.913674 ATCACAGAAAAATCTTCTACTCCAC 57.086 36.000 0.00 0.00 0.00 4.02
688 712 5.926542 TCACAGAAAAATCTTCTACTCCACG 59.073 40.000 0.00 0.00 0.00 4.94
689 713 5.696724 CACAGAAAAATCTTCTACTCCACGT 59.303 40.000 0.00 0.00 0.00 4.49
708 732 4.267928 CACGTTGTAGGCAAGAGCTATTAC 59.732 45.833 0.00 0.00 41.70 1.89
746 770 2.434359 GAGAGCCGTCCAAACCCG 60.434 66.667 0.00 0.00 0.00 5.28
787 812 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
788 813 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
789 814 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
790 815 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
791 816 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
792 817 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
793 818 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
794 819 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
795 820 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
796 821 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
797 822 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
798 823 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
805 830 2.511218 AGAGAGAGAGAGAGATGGCACT 59.489 50.000 0.00 0.00 0.00 4.40
950 988 5.568620 TTTTCTTCCTATCCTATGGCTCC 57.431 43.478 0.00 0.00 0.00 4.70
1032 1070 2.030540 GCAATGCATGCGGAGTGAATAT 60.031 45.455 14.09 0.00 46.87 1.28
1078 1116 4.991687 AGACAGGAAGAACGAAGATCAAAC 59.008 41.667 0.00 0.00 0.00 2.93
1125 1163 0.320421 AGGTTGGTGACGATCCGTTG 60.320 55.000 0.00 0.00 41.37 4.10
1160 1198 8.429237 TTTTCCCACAAGTGTAATAATTCCAT 57.571 30.769 0.00 0.00 0.00 3.41
1255 1293 5.635700 GCTAATTAGTCCTAGCGATTCAAGG 59.364 44.000 13.91 0.00 31.85 3.61
1258 1296 1.405821 AGTCCTAGCGATTCAAGGTCG 59.594 52.381 0.00 0.00 41.77 4.79
1269 1307 1.707106 TCAAGGTCGTGGTTGGACTA 58.293 50.000 0.00 0.00 34.82 2.59
1464 1506 2.376109 CTTGAGGCCATTCTTGATGCT 58.624 47.619 5.01 0.00 34.25 3.79
1467 1509 2.756760 TGAGGCCATTCTTGATGCTTTC 59.243 45.455 5.01 0.00 34.25 2.62
1491 1533 7.093992 TCTGAAAAATCGTGTTGTTTCCTTTT 58.906 30.769 0.00 0.00 0.00 2.27
1650 1692 3.095332 TGACTGAGGAGGAGATCACAAG 58.905 50.000 0.00 0.00 0.00 3.16
1773 1841 9.295825 TCCACATTTTCACTTATGTATGAGTTT 57.704 29.630 0.00 0.00 33.42 2.66
1774 1842 9.912634 CCACATTTTCACTTATGTATGAGTTTT 57.087 29.630 0.00 0.00 33.42 2.43
2091 2159 7.362662 GTGAGATGTTCTTTTAAATGCTCACA 58.637 34.615 21.02 13.54 45.32 3.58
2109 2177 7.620880 TGCTCACAGTATTCTTTTAGTACCAT 58.379 34.615 0.00 0.00 0.00 3.55
2370 2444 9.117183 TGATTGAAGCTAGAGTACGTTTCTATA 57.883 33.333 0.00 0.00 0.00 1.31
2461 5605 9.777575 TTTAAGTTTGAACTAGCAAAACAGTAC 57.222 29.630 14.43 0.00 39.26 2.73
2678 5829 9.419297 CACTACTAGAAACATAACTGTGCTTTA 57.581 33.333 0.00 0.00 35.22 1.85
2713 5864 2.047560 GCCGGTCGTGTTAAGGCT 60.048 61.111 1.90 0.00 44.06 4.58
2727 5878 3.502572 GGCTTTGTCATCGGCCTC 58.497 61.111 0.00 0.00 41.20 4.70
2948 6104 0.973632 TTCTTGGAAGCCTGCTCGTA 59.026 50.000 0.00 0.00 0.00 3.43
2952 6108 2.489938 TGGAAGCCTGCTCGTATTTT 57.510 45.000 0.00 0.00 0.00 1.82
3292 6503 7.177568 ACTTCTCTCAGATACAACTCTTAGCAA 59.822 37.037 0.00 0.00 0.00 3.91
3606 6843 2.499289 ACACCTGAAAAATGCACAACCA 59.501 40.909 0.00 0.00 0.00 3.67
3662 8181 4.928615 TGTGACTTTTGTTTTTGCTTGGAG 59.071 37.500 0.00 0.00 0.00 3.86
3887 8408 5.535030 TCCTAAAGAAAGGGCAAAGAAAGTC 59.465 40.000 0.00 0.00 37.24 3.01
3983 8504 0.311790 ACTTGGCATTTGTCGCACAG 59.688 50.000 0.00 0.00 0.00 3.66
4034 8555 5.982516 CCTTGTCCTCTCTTCTGATAAATCG 59.017 44.000 0.00 0.00 0.00 3.34
4043 8564 5.007034 TCTTCTGATAAATCGGTTTTGCCA 58.993 37.500 0.00 0.00 36.97 4.92
4081 8602 8.692110 TGCAATGCAAGAAACTAATAGAAATG 57.308 30.769 5.01 0.00 34.76 2.32
4120 8647 7.222000 GGATTTGTTCCACCTGTTATTTGTA 57.778 36.000 0.00 0.00 44.74 2.41
4122 8649 8.311109 GGATTTGTTCCACCTGTTATTTGTATT 58.689 33.333 0.00 0.00 44.74 1.89
4198 8725 8.888716 GTTTCAAACATTTTGTCCAGGTTAATT 58.111 29.630 0.00 0.00 0.00 1.40
4206 8733 8.819974 CATTTTGTCCAGGTTAATTCATATTGC 58.180 33.333 0.00 0.00 0.00 3.56
4238 8766 7.713764 AATGATTTTAAACCTGTGCAGAAAC 57.286 32.000 0.02 0.00 0.00 2.78
4256 8784 4.863131 AGAAACGGTCTATCATCGAACAAC 59.137 41.667 0.00 0.00 33.56 3.32
4264 8792 1.006825 TCATCGAACAACGTGGCTCG 61.007 55.000 9.48 9.48 46.00 5.03
4280 8808 0.456221 CTCGTGCCGTCCAAGATACT 59.544 55.000 0.00 0.00 31.53 2.12
4283 8811 0.527817 GTGCCGTCCAAGATACTCCG 60.528 60.000 0.00 0.00 0.00 4.63
4361 8889 5.240623 TCTTGGAATTGCAACTTACGTGAAT 59.759 36.000 8.47 0.00 0.00 2.57
4410 8938 0.038744 AGTCCCATTTCCACCAGCAG 59.961 55.000 0.00 0.00 0.00 4.24
4414 8942 0.529378 CCATTTCCACCAGCAGCTTC 59.471 55.000 0.00 0.00 0.00 3.86
4434 8963 7.489113 CAGCTTCGCCTTGAAATATATTTTTGT 59.511 33.333 11.92 0.00 35.79 2.83
4543 9072 3.631686 CGAAACCTCCAATTATCATGCCA 59.368 43.478 0.00 0.00 0.00 4.92
4627 9156 6.182627 TCTTGTGAATGTAGCAGGAAATGAT 58.817 36.000 0.00 0.00 0.00 2.45
4693 9223 2.303600 ACCCCGTGTATGCTTTAGTTGA 59.696 45.455 0.00 0.00 0.00 3.18
4907 9437 6.073058 TCAGGAAAAACATCTCACATCGAAAG 60.073 38.462 0.00 0.00 0.00 2.62
4922 9452 2.736721 TCGAAAGCTTCAAGGTTGATCG 59.263 45.455 14.53 14.53 37.32 3.69
4923 9453 2.736721 CGAAAGCTTCAAGGTTGATCGA 59.263 45.455 15.30 0.00 37.85 3.59
5005 9535 9.383519 GTGTGTTGATTGATTCTCTAGGATAAA 57.616 33.333 0.00 0.00 0.00 1.40
5106 9636 1.632965 GGGGAGGATGGTGTGTACCC 61.633 65.000 0.00 0.00 46.96 3.69
5119 9649 2.027192 TGTGTACCCTTGCTCTGATTCC 60.027 50.000 0.00 0.00 0.00 3.01
5120 9650 2.027192 GTGTACCCTTGCTCTGATTCCA 60.027 50.000 0.00 0.00 0.00 3.53
5140 9670 9.351570 GATTCCAGAGTCAATTTCAGATTTTTC 57.648 33.333 0.00 0.00 0.00 2.29
5141 9671 6.902341 TCCAGAGTCAATTTCAGATTTTTCG 58.098 36.000 0.00 0.00 0.00 3.46
5142 9672 5.570589 CCAGAGTCAATTTCAGATTTTTCGC 59.429 40.000 0.00 0.00 0.00 4.70
5143 9673 6.144854 CAGAGTCAATTTCAGATTTTTCGCA 58.855 36.000 0.00 0.00 0.00 5.10
5309 9840 1.743394 TCGCGCTAACTTGAGAGATGA 59.257 47.619 5.56 0.00 0.00 2.92
5311 9842 2.280183 CGCGCTAACTTGAGAGATGAAC 59.720 50.000 5.56 0.00 0.00 3.18
5312 9843 3.254060 GCGCTAACTTGAGAGATGAACA 58.746 45.455 0.00 0.00 0.00 3.18
5313 9844 3.305629 GCGCTAACTTGAGAGATGAACAG 59.694 47.826 0.00 0.00 0.00 3.16
5314 9845 4.489810 CGCTAACTTGAGAGATGAACAGT 58.510 43.478 0.00 0.00 0.00 3.55
5315 9846 4.325741 CGCTAACTTGAGAGATGAACAGTG 59.674 45.833 0.00 0.00 0.00 3.66
5316 9847 5.473931 GCTAACTTGAGAGATGAACAGTGA 58.526 41.667 0.00 0.00 0.00 3.41
5317 9848 5.347364 GCTAACTTGAGAGATGAACAGTGAC 59.653 44.000 0.00 0.00 0.00 3.67
5318 9849 4.944619 ACTTGAGAGATGAACAGTGACA 57.055 40.909 0.00 0.00 0.00 3.58
5319 9850 5.480642 ACTTGAGAGATGAACAGTGACAT 57.519 39.130 0.00 2.00 0.00 3.06
5320 9851 5.862845 ACTTGAGAGATGAACAGTGACATT 58.137 37.500 0.00 0.00 0.00 2.71
5321 9852 6.294473 ACTTGAGAGATGAACAGTGACATTT 58.706 36.000 0.00 0.00 0.00 2.32
5322 9853 6.769822 ACTTGAGAGATGAACAGTGACATTTT 59.230 34.615 0.00 0.00 0.00 1.82
5323 9854 7.284034 ACTTGAGAGATGAACAGTGACATTTTT 59.716 33.333 0.00 0.00 0.00 1.94
5356 9887 2.041620 ACAGTAACATTGGGCCAGTCAT 59.958 45.455 6.23 0.00 0.00 3.06
5392 9923 7.768120 AGTGACATTGCCTTTTTCATTTTGTTA 59.232 29.630 0.00 0.00 0.00 2.41
5428 9959 4.406972 CCCAAGATGATCCTCACTCTTACA 59.593 45.833 0.62 0.00 29.57 2.41
5535 10066 0.338120 CCAGAAGAGGAGGAGGAGGT 59.662 60.000 0.00 0.00 0.00 3.85
5542 10085 1.229529 GGAGGAGGAGGTGGTGGAA 60.230 63.158 0.00 0.00 0.00 3.53
5545 10088 0.193574 AGGAGGAGGTGGTGGAAGAA 59.806 55.000 0.00 0.00 0.00 2.52
5610 10171 0.321475 GCAGAGGCAGAAGCAGAAGT 60.321 55.000 0.00 0.00 44.61 3.01
5616 10189 3.169099 AGGCAGAAGCAGAAGTAGAAGA 58.831 45.455 0.00 0.00 44.61 2.87
5720 10293 0.974010 ACGGGAGGGATAGCAAACGA 60.974 55.000 0.00 0.00 0.00 3.85
5724 10297 1.291132 GAGGGATAGCAAACGACAGC 58.709 55.000 0.00 0.00 0.00 4.40
5728 10301 0.652592 GATAGCAAACGACAGCGCAT 59.347 50.000 11.47 0.00 42.48 4.73
5790 10363 7.574779 CGCAGTGATGAGCTTCTACTCTTATAT 60.575 40.741 0.00 0.00 37.58 0.86
5812 10385 2.908688 TTTGAAAAAGGAGGCTTGCC 57.091 45.000 2.97 2.97 0.00 4.52
5813 10386 1.047801 TTGAAAAAGGAGGCTTGCCC 58.952 50.000 8.17 0.00 0.00 5.36
5815 10388 0.605083 GAAAAAGGAGGCTTGCCCTG 59.395 55.000 8.17 0.00 46.60 4.45
5816 10389 0.833409 AAAAAGGAGGCTTGCCCTGG 60.833 55.000 8.17 0.00 46.60 4.45
5817 10390 2.023760 AAAAGGAGGCTTGCCCTGGT 62.024 55.000 8.17 0.00 46.60 4.00
5818 10391 2.432174 AAAGGAGGCTTGCCCTGGTC 62.432 60.000 8.17 0.00 46.60 4.02
5819 10392 3.334054 GGAGGCTTGCCCTGGTCT 61.334 66.667 8.17 0.00 46.60 3.85
5820 10393 2.270527 GAGGCTTGCCCTGGTCTC 59.729 66.667 8.17 0.00 46.60 3.36
5821 10394 2.204059 AGGCTTGCCCTGGTCTCT 60.204 61.111 8.17 0.00 44.28 3.10
5822 10395 1.846712 GAGGCTTGCCCTGGTCTCTT 61.847 60.000 8.17 0.00 46.60 2.85
5823 10396 1.676967 GGCTTGCCCTGGTCTCTTG 60.677 63.158 0.00 0.00 0.00 3.02
5824 10397 2.338785 GCTTGCCCTGGTCTCTTGC 61.339 63.158 0.00 0.00 0.00 4.01
5825 10398 1.073722 CTTGCCCTGGTCTCTTGCA 59.926 57.895 0.00 0.00 0.00 4.08
5826 10399 0.323178 CTTGCCCTGGTCTCTTGCAT 60.323 55.000 0.00 0.00 0.00 3.96
5827 10400 0.322816 TTGCCCTGGTCTCTTGCATC 60.323 55.000 0.00 0.00 0.00 3.91
5828 10401 1.203441 TGCCCTGGTCTCTTGCATCT 61.203 55.000 0.00 0.00 0.00 2.90
5829 10402 0.747283 GCCCTGGTCTCTTGCATCTG 60.747 60.000 0.00 0.00 0.00 2.90
5830 10403 0.907486 CCCTGGTCTCTTGCATCTGA 59.093 55.000 0.00 0.00 0.00 3.27
5831 10404 1.280133 CCCTGGTCTCTTGCATCTGAA 59.720 52.381 0.00 0.00 0.00 3.02
5832 10405 2.354259 CCTGGTCTCTTGCATCTGAAC 58.646 52.381 0.00 0.00 0.00 3.18
5833 10406 1.998315 CTGGTCTCTTGCATCTGAACG 59.002 52.381 0.00 0.00 0.00 3.95
5834 10407 1.618343 TGGTCTCTTGCATCTGAACGA 59.382 47.619 0.00 0.00 0.00 3.85
5835 10408 2.234661 TGGTCTCTTGCATCTGAACGAT 59.765 45.455 0.00 0.00 0.00 3.73
5843 10416 2.836479 CATCTGAACGATGCATGCAA 57.164 45.000 26.68 8.49 42.75 4.08
5844 10417 2.447250 CATCTGAACGATGCATGCAAC 58.553 47.619 26.68 21.63 42.75 4.17
5845 10418 0.804364 TCTGAACGATGCATGCAACC 59.196 50.000 26.68 18.06 0.00 3.77
5846 10419 0.522626 CTGAACGATGCATGCAACCA 59.477 50.000 26.68 14.17 0.00 3.67
5847 10420 1.133598 CTGAACGATGCATGCAACCAT 59.866 47.619 26.68 12.14 0.00 3.55
5848 10421 2.355444 CTGAACGATGCATGCAACCATA 59.645 45.455 26.68 8.96 0.00 2.74
5849 10422 2.950975 TGAACGATGCATGCAACCATAT 59.049 40.909 26.68 6.72 0.00 1.78
5850 10423 3.380954 TGAACGATGCATGCAACCATATT 59.619 39.130 26.68 13.01 0.00 1.28
5851 10424 4.578105 TGAACGATGCATGCAACCATATTA 59.422 37.500 26.68 4.66 0.00 0.98
5852 10425 5.241285 TGAACGATGCATGCAACCATATTAT 59.759 36.000 26.68 4.06 0.00 1.28
5853 10426 5.710513 ACGATGCATGCAACCATATTATT 57.289 34.783 26.68 3.17 0.00 1.40
5854 10427 6.816134 ACGATGCATGCAACCATATTATTA 57.184 33.333 26.68 0.00 0.00 0.98
5855 10428 7.213216 ACGATGCATGCAACCATATTATTAA 57.787 32.000 26.68 0.00 0.00 1.40
5856 10429 7.656412 ACGATGCATGCAACCATATTATTAAA 58.344 30.769 26.68 0.00 0.00 1.52
5857 10430 8.140628 ACGATGCATGCAACCATATTATTAAAA 58.859 29.630 26.68 0.00 0.00 1.52
5858 10431 8.976471 CGATGCATGCAACCATATTATTAAAAA 58.024 29.630 26.68 0.00 0.00 1.94
5880 10453 7.913674 AAAAGTCTCAGAATATCACAAGGTC 57.086 36.000 0.00 0.00 0.00 3.85
5881 10454 6.865834 AAGTCTCAGAATATCACAAGGTCT 57.134 37.500 0.00 0.00 0.00 3.85
5882 10455 6.865834 AGTCTCAGAATATCACAAGGTCTT 57.134 37.500 0.00 0.00 0.00 3.01
5883 10456 7.251321 AGTCTCAGAATATCACAAGGTCTTT 57.749 36.000 0.00 0.00 0.00 2.52
5884 10457 8.367660 AGTCTCAGAATATCACAAGGTCTTTA 57.632 34.615 0.00 0.00 0.00 1.85
5885 10458 8.816894 AGTCTCAGAATATCACAAGGTCTTTAA 58.183 33.333 0.00 0.00 0.00 1.52
5886 10459 9.436957 GTCTCAGAATATCACAAGGTCTTTAAA 57.563 33.333 0.00 0.00 0.00 1.52
5887 10460 9.658799 TCTCAGAATATCACAAGGTCTTTAAAG 57.341 33.333 9.04 9.04 0.00 1.85
5888 10461 9.442047 CTCAGAATATCACAAGGTCTTTAAAGT 57.558 33.333 14.74 0.00 0.00 2.66
5897 10470 9.841295 TCACAAGGTCTTTAAAGTATTACAACT 57.159 29.630 14.74 0.00 0.00 3.16
5899 10472 9.841295 ACAAGGTCTTTAAAGTATTACAACTCA 57.159 29.630 14.74 0.00 0.00 3.41
5901 10474 9.841295 AAGGTCTTTAAAGTATTACAACTCACA 57.159 29.630 14.74 0.00 0.00 3.58
5902 10475 9.841295 AGGTCTTTAAAGTATTACAACTCACAA 57.159 29.630 14.74 0.00 0.00 3.33
5910 10483 7.730364 AGTATTACAACTCACAAAAGGAGTG 57.270 36.000 0.00 0.00 44.50 3.51
5911 10484 7.506114 AGTATTACAACTCACAAAAGGAGTGA 58.494 34.615 0.00 0.00 44.50 3.41
5912 10485 7.990886 AGTATTACAACTCACAAAAGGAGTGAA 59.009 33.333 0.00 0.00 44.50 3.18
5913 10486 6.677781 TTACAACTCACAAAAGGAGTGAAG 57.322 37.500 0.00 0.00 44.50 3.02
5914 10487 4.843728 ACAACTCACAAAAGGAGTGAAGA 58.156 39.130 0.00 0.00 44.50 2.87
5915 10488 5.253330 ACAACTCACAAAAGGAGTGAAGAA 58.747 37.500 0.00 0.00 44.50 2.52
5916 10489 5.710099 ACAACTCACAAAAGGAGTGAAGAAA 59.290 36.000 0.00 0.00 44.50 2.52
5917 10490 6.208599 ACAACTCACAAAAGGAGTGAAGAAAA 59.791 34.615 0.00 0.00 44.50 2.29
5918 10491 6.834168 ACTCACAAAAGGAGTGAAGAAAAA 57.166 33.333 0.00 0.00 44.60 1.94
5919 10492 7.410120 ACTCACAAAAGGAGTGAAGAAAAAT 57.590 32.000 0.00 0.00 44.60 1.82
5920 10493 8.519799 ACTCACAAAAGGAGTGAAGAAAAATA 57.480 30.769 0.00 0.00 44.60 1.40
5921 10494 8.966868 ACTCACAAAAGGAGTGAAGAAAAATAA 58.033 29.630 0.00 0.00 44.60 1.40
5922 10495 9.801873 CTCACAAAAGGAGTGAAGAAAAATAAA 57.198 29.630 0.00 0.00 44.60 1.40
5939 10512 3.768633 AAAAACCGCAATGCCACAA 57.231 42.105 0.00 0.00 0.00 3.33
5940 10513 1.294857 AAAAACCGCAATGCCACAAC 58.705 45.000 0.00 0.00 0.00 3.32
5941 10514 0.531753 AAAACCGCAATGCCACAACC 60.532 50.000 0.00 0.00 0.00 3.77
5942 10515 2.691674 AAACCGCAATGCCACAACCG 62.692 55.000 0.00 0.00 0.00 4.44
5943 10516 4.418401 CCGCAATGCCACAACCGG 62.418 66.667 0.00 0.00 0.00 5.28
5944 10517 3.669344 CGCAATGCCACAACCGGT 61.669 61.111 0.00 0.00 0.00 5.28
5945 10518 2.328856 CGCAATGCCACAACCGGTA 61.329 57.895 8.00 0.00 0.00 4.02
5946 10519 1.653094 CGCAATGCCACAACCGGTAT 61.653 55.000 8.00 0.00 31.96 2.73
5947 10520 0.179140 GCAATGCCACAACCGGTATG 60.179 55.000 8.00 9.97 30.96 2.39
5948 10521 1.458398 CAATGCCACAACCGGTATGA 58.542 50.000 18.15 2.10 30.96 2.15
5949 10522 1.815613 CAATGCCACAACCGGTATGAA 59.184 47.619 18.15 8.08 30.96 2.57
5950 10523 2.426738 CAATGCCACAACCGGTATGAAT 59.573 45.455 18.15 9.74 30.96 2.57
5951 10524 2.208132 TGCCACAACCGGTATGAATT 57.792 45.000 18.15 0.00 0.00 2.17
5952 10525 3.351794 TGCCACAACCGGTATGAATTA 57.648 42.857 18.15 0.00 0.00 1.40
5953 10526 3.687125 TGCCACAACCGGTATGAATTAA 58.313 40.909 18.15 0.00 0.00 1.40
5954 10527 4.079970 TGCCACAACCGGTATGAATTAAA 58.920 39.130 18.15 0.00 0.00 1.52
5955 10528 4.156922 TGCCACAACCGGTATGAATTAAAG 59.843 41.667 18.15 3.24 0.00 1.85
5956 10529 4.439563 GCCACAACCGGTATGAATTAAAGG 60.440 45.833 18.15 6.12 0.00 3.11
5957 10530 4.944930 CCACAACCGGTATGAATTAAAGGA 59.055 41.667 18.15 0.00 0.00 3.36
5958 10531 5.163693 CCACAACCGGTATGAATTAAAGGAC 60.164 44.000 18.15 0.00 0.00 3.85
5959 10532 5.646360 CACAACCGGTATGAATTAAAGGACT 59.354 40.000 8.00 0.00 0.00 3.85
5960 10533 6.819649 CACAACCGGTATGAATTAAAGGACTA 59.180 38.462 8.00 0.00 0.00 2.59
5961 10534 7.011109 CACAACCGGTATGAATTAAAGGACTAG 59.989 40.741 8.00 0.00 0.00 2.57
5962 10535 6.170846 ACCGGTATGAATTAAAGGACTAGG 57.829 41.667 4.49 0.00 0.00 3.02
5963 10536 5.071384 ACCGGTATGAATTAAAGGACTAGGG 59.929 44.000 4.49 0.00 0.00 3.53
5964 10537 4.995487 CGGTATGAATTAAAGGACTAGGGC 59.005 45.833 0.00 0.00 0.00 5.19
5965 10538 5.314529 GGTATGAATTAAAGGACTAGGGCC 58.685 45.833 0.00 0.00 0.00 5.80
5966 10539 3.945640 TGAATTAAAGGACTAGGGCCC 57.054 47.619 16.46 16.46 0.00 5.80
5967 10540 3.470868 TGAATTAAAGGACTAGGGCCCT 58.529 45.455 31.35 31.35 0.00 5.19
5968 10541 4.637600 TGAATTAAAGGACTAGGGCCCTA 58.362 43.478 30.08 30.08 31.36 3.53
5978 10551 3.375647 CTAGGGCCCTAGACTCCTATC 57.624 57.143 44.67 5.79 46.56 2.08
5979 10552 1.547099 AGGGCCCTAGACTCCTATCA 58.453 55.000 27.42 0.00 0.00 2.15
5980 10553 2.085934 AGGGCCCTAGACTCCTATCAT 58.914 52.381 27.42 0.00 0.00 2.45
5981 10554 2.183679 GGGCCCTAGACTCCTATCATG 58.816 57.143 17.04 0.00 0.00 3.07
5982 10555 2.493687 GGGCCCTAGACTCCTATCATGT 60.494 54.545 17.04 0.00 0.00 3.21
5983 10556 3.243724 GGCCCTAGACTCCTATCATGTT 58.756 50.000 0.00 0.00 0.00 2.71
5984 10557 4.417437 GGCCCTAGACTCCTATCATGTTA 58.583 47.826 0.00 0.00 0.00 2.41
5985 10558 5.026790 GGCCCTAGACTCCTATCATGTTAT 58.973 45.833 0.00 0.00 0.00 1.89
5986 10559 5.105146 GGCCCTAGACTCCTATCATGTTATG 60.105 48.000 0.00 0.00 0.00 1.90
5987 10560 5.482175 GCCCTAGACTCCTATCATGTTATGT 59.518 44.000 0.00 0.00 0.00 2.29
5988 10561 6.573289 GCCCTAGACTCCTATCATGTTATGTG 60.573 46.154 0.00 0.00 0.00 3.21
5989 10562 6.721668 CCCTAGACTCCTATCATGTTATGTGA 59.278 42.308 0.00 0.00 0.00 3.58
5990 10563 7.398618 CCCTAGACTCCTATCATGTTATGTGAT 59.601 40.741 0.00 0.00 39.50 3.06
5991 10564 8.465999 CCTAGACTCCTATCATGTTATGTGATC 58.534 40.741 0.00 0.00 37.48 2.92
5992 10565 7.846101 AGACTCCTATCATGTTATGTGATCA 57.154 36.000 0.00 0.00 37.48 2.92
5993 10566 7.665690 AGACTCCTATCATGTTATGTGATCAC 58.334 38.462 19.27 19.27 37.48 3.06
5994 10567 6.763355 ACTCCTATCATGTTATGTGATCACC 58.237 40.000 22.85 8.07 37.48 4.02
5995 10568 6.327365 ACTCCTATCATGTTATGTGATCACCA 59.673 38.462 22.85 13.55 37.48 4.17
5996 10569 7.016957 ACTCCTATCATGTTATGTGATCACCAT 59.983 37.037 22.85 15.17 37.48 3.55
5997 10570 7.389232 TCCTATCATGTTATGTGATCACCATC 58.611 38.462 22.85 11.06 37.48 3.51
5998 10571 6.596888 CCTATCATGTTATGTGATCACCATCC 59.403 42.308 22.85 9.20 37.48 3.51
5999 10572 5.370875 TCATGTTATGTGATCACCATCCA 57.629 39.130 22.85 14.23 0.00 3.41
6000 10573 5.753716 TCATGTTATGTGATCACCATCCAA 58.246 37.500 22.85 3.48 0.00 3.53
6001 10574 6.186234 TCATGTTATGTGATCACCATCCAAA 58.814 36.000 22.85 2.70 0.00 3.28
6002 10575 5.895636 TGTTATGTGATCACCATCCAAAC 57.104 39.130 22.85 16.03 0.00 2.93
6003 10576 4.704540 TGTTATGTGATCACCATCCAAACC 59.295 41.667 22.85 2.51 0.00 3.27
6004 10577 1.819928 TGTGATCACCATCCAAACCG 58.180 50.000 22.85 0.00 0.00 4.44
6005 10578 1.094785 GTGATCACCATCCAAACCGG 58.905 55.000 15.31 0.00 0.00 5.28
6006 10579 0.695924 TGATCACCATCCAAACCGGT 59.304 50.000 0.00 0.00 35.57 5.28
6007 10580 1.074727 TGATCACCATCCAAACCGGTT 59.925 47.619 15.86 15.86 35.57 4.44
6008 10581 1.472480 GATCACCATCCAAACCGGTTG 59.528 52.381 23.08 14.70 36.94 3.77
6009 10582 0.474614 TCACCATCCAAACCGGTTGA 59.525 50.000 23.08 15.50 39.87 3.18
6010 10583 1.133761 TCACCATCCAAACCGGTTGAA 60.134 47.619 23.08 9.90 39.87 2.69
6011 10584 1.892474 CACCATCCAAACCGGTTGAAT 59.108 47.619 23.08 11.91 39.87 2.57
6012 10585 3.085533 CACCATCCAAACCGGTTGAATA 58.914 45.455 23.08 7.51 39.87 1.75
6013 10586 3.699038 CACCATCCAAACCGGTTGAATAT 59.301 43.478 23.08 9.64 39.87 1.28
6014 10587 4.884744 CACCATCCAAACCGGTTGAATATA 59.115 41.667 23.08 4.03 39.87 0.86
6015 10588 5.008613 CACCATCCAAACCGGTTGAATATAG 59.991 44.000 23.08 10.04 39.87 1.31
6016 10589 4.023193 CCATCCAAACCGGTTGAATATAGC 60.023 45.833 23.08 0.00 39.87 2.97
6017 10590 4.223556 TCCAAACCGGTTGAATATAGCA 57.776 40.909 23.08 0.00 39.87 3.49
6018 10591 4.787551 TCCAAACCGGTTGAATATAGCAT 58.212 39.130 23.08 0.00 39.87 3.79
6019 10592 4.578516 TCCAAACCGGTTGAATATAGCATG 59.421 41.667 23.08 10.93 39.87 4.06
6020 10593 4.338118 CCAAACCGGTTGAATATAGCATGT 59.662 41.667 23.08 0.00 39.87 3.21
6021 10594 5.273170 CAAACCGGTTGAATATAGCATGTG 58.727 41.667 23.08 6.50 39.87 3.21
6022 10595 2.878406 ACCGGTTGAATATAGCATGTGC 59.122 45.455 0.00 0.00 42.49 4.57
6023 10596 8.332831 CAAACCGGTTGAATATAGCATGTGCT 62.333 42.308 23.08 12.66 46.44 4.40
6037 10610 4.795268 GCATGTGCTATCATCTTCCATTG 58.205 43.478 0.00 0.00 38.21 2.82
6038 10611 4.321008 GCATGTGCTATCATCTTCCATTGG 60.321 45.833 0.00 0.00 38.21 3.16
6039 10612 4.508551 TGTGCTATCATCTTCCATTGGT 57.491 40.909 1.86 0.00 0.00 3.67
6040 10613 4.858850 TGTGCTATCATCTTCCATTGGTT 58.141 39.130 1.86 0.00 0.00 3.67
6041 10614 4.641541 TGTGCTATCATCTTCCATTGGTTG 59.358 41.667 1.86 0.00 0.00 3.77
6042 10615 3.633525 TGCTATCATCTTCCATTGGTTGC 59.366 43.478 1.86 0.00 0.00 4.17
6043 10616 3.633525 GCTATCATCTTCCATTGGTTGCA 59.366 43.478 1.86 0.00 0.00 4.08
6044 10617 4.498682 GCTATCATCTTCCATTGGTTGCAC 60.499 45.833 1.86 0.00 0.00 4.57
6045 10618 2.170166 TCATCTTCCATTGGTTGCACC 58.830 47.619 1.86 0.00 39.22 5.01
6046 10619 1.205417 CATCTTCCATTGGTTGCACCC 59.795 52.381 1.86 0.00 37.50 4.61
6047 10620 0.187117 TCTTCCATTGGTTGCACCCA 59.813 50.000 0.00 0.00 37.50 4.51
6048 10621 1.203162 TCTTCCATTGGTTGCACCCAT 60.203 47.619 2.83 0.00 37.50 4.00
6049 10622 1.624813 CTTCCATTGGTTGCACCCATT 59.375 47.619 2.83 0.00 37.50 3.16
6050 10623 2.612285 TCCATTGGTTGCACCCATTA 57.388 45.000 2.83 0.00 37.50 1.90
6051 10624 2.894731 TCCATTGGTTGCACCCATTAA 58.105 42.857 2.83 0.00 37.50 1.40
6052 10625 2.564947 TCCATTGGTTGCACCCATTAAC 59.435 45.455 2.83 0.00 37.50 2.01
6053 10626 2.354604 CCATTGGTTGCACCCATTAACC 60.355 50.000 2.83 0.00 43.20 2.85
6055 10628 1.626686 TGGTTGCACCCATTAACCAG 58.373 50.000 0.00 0.00 46.41 4.00
6178 10752 7.888021 ACACATCCCATGTACTGAATAAGAAAA 59.112 33.333 0.00 0.00 42.70 2.29
6293 10867 4.838423 CCAAAATAAAGGAAGACAACCCCT 59.162 41.667 0.00 0.00 0.00 4.79
6340 10914 3.461085 ACTGGGCTCCACTATTGATCATT 59.539 43.478 0.00 0.00 0.00 2.57
6440 11014 1.139256 TCGGCACCTACAACTGTTTGA 59.861 47.619 0.00 0.00 36.48 2.69
6491 11065 0.179100 CTCACACCCGCGAGATCAAT 60.179 55.000 8.23 0.00 0.00 2.57
6543 11118 2.033141 GGTGGAGCTGCAGCAAGA 59.967 61.111 38.24 19.44 45.16 3.02
6546 11121 1.601759 TGGAGCTGCAGCAAGAACC 60.602 57.895 38.24 28.82 45.16 3.62
6550 11125 0.466922 AGCTGCAGCAAGAACCAAGT 60.467 50.000 38.24 12.75 45.16 3.16
6558 11133 6.591001 TGCAGCAAGAACCAAGTATATATGA 58.409 36.000 0.00 0.00 0.00 2.15
6559 11134 7.053498 TGCAGCAAGAACCAAGTATATATGAA 58.947 34.615 0.00 0.00 0.00 2.57
6594 11169 4.867608 GCAAATAAGAGCGAGAAGAGAAGT 59.132 41.667 0.00 0.00 0.00 3.01
6595 11170 5.350091 GCAAATAAGAGCGAGAAGAGAAGTT 59.650 40.000 0.00 0.00 0.00 2.66
6603 11180 2.412455 CGAGAAGAGAAGTTACGCACGA 60.412 50.000 0.00 0.00 0.00 4.35
6686 11263 0.903454 ACCGTGTTCTCTTCCCGGAT 60.903 55.000 0.73 0.00 41.08 4.18
6774 11351 8.142551 GTCAAGTTCTCTACAACCGGATATTAT 58.857 37.037 9.46 0.00 0.00 1.28
6795 11372 2.761767 TCAAATTCCCATCTGCCACATG 59.238 45.455 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 221 1.014352 CGGGTGCTAATGCTACAACC 58.986 55.000 0.00 0.00 40.48 3.77
238 258 1.613437 CGGGATTGCTTTTTCACAGGT 59.387 47.619 0.00 0.00 0.00 4.00
246 266 0.394352 ATCGCTCCGGGATTGCTTTT 60.394 50.000 0.00 0.00 31.11 2.27
324 345 1.453155 GACGGTAACAGGACGACCTA 58.547 55.000 6.01 0.00 45.94 3.08
343 364 1.596260 TCTATTCGAGTAGCCGTGTCG 59.404 52.381 9.95 0.00 34.98 4.35
354 375 6.201806 CCTGCAGGAAAGTTAATCTATTCGAG 59.798 42.308 29.88 0.00 37.39 4.04
402 423 1.617018 CCGGCCAGAGGTGATTGAGA 61.617 60.000 2.24 0.00 0.00 3.27
412 434 3.883744 AAAGCGTGTCCGGCCAGAG 62.884 63.158 2.24 0.00 33.68 3.35
476 498 1.479709 GCCTCTCTGTTGAGCCTAGA 58.520 55.000 0.00 0.00 40.03 2.43
502 524 2.293677 CGTGCTTAGGATGTAGATCGGT 59.706 50.000 0.00 0.00 0.00 4.69
506 528 3.555795 CCATGCGTGCTTAGGATGTAGAT 60.556 47.826 0.00 0.00 35.97 1.98
582 606 0.779997 AATGGAGGTTGCCAGGACTT 59.220 50.000 0.00 0.00 42.15 3.01
603 627 4.453136 GTCCACGTAAAGCAACCATCTTTA 59.547 41.667 0.00 0.00 35.58 1.85
608 632 1.202830 TGGTCCACGTAAAGCAACCAT 60.203 47.619 0.00 0.00 32.08 3.55
642 666 0.937304 TTCAAACGTCAGCACTGAGC 59.063 50.000 0.00 0.00 40.75 4.26
643 667 3.673746 TTTTCAAACGTCAGCACTGAG 57.326 42.857 0.00 0.00 40.75 3.35
644 668 3.625313 TGATTTTCAAACGTCAGCACTGA 59.375 39.130 0.00 0.00 37.24 3.41
645 669 3.725740 GTGATTTTCAAACGTCAGCACTG 59.274 43.478 0.00 0.00 0.00 3.66
646 670 3.376859 TGTGATTTTCAAACGTCAGCACT 59.623 39.130 0.00 0.00 0.00 4.40
647 671 3.690422 TGTGATTTTCAAACGTCAGCAC 58.310 40.909 0.00 0.00 0.00 4.40
648 672 3.625313 TCTGTGATTTTCAAACGTCAGCA 59.375 39.130 0.00 0.00 0.00 4.41
649 673 4.209452 TCTGTGATTTTCAAACGTCAGC 57.791 40.909 0.00 0.00 0.00 4.26
650 674 7.504922 TTTTTCTGTGATTTTCAAACGTCAG 57.495 32.000 0.00 0.00 0.00 3.51
651 675 7.973388 AGATTTTTCTGTGATTTTCAAACGTCA 59.027 29.630 0.00 0.00 0.00 4.35
652 676 8.340230 AGATTTTTCTGTGATTTTCAAACGTC 57.660 30.769 0.00 0.00 0.00 4.34
653 677 8.702163 AAGATTTTTCTGTGATTTTCAAACGT 57.298 26.923 0.00 0.00 0.00 3.99
654 678 9.023967 AGAAGATTTTTCTGTGATTTTCAAACG 57.976 29.630 0.00 0.00 0.00 3.60
659 683 9.833182 GGAGTAGAAGATTTTTCTGTGATTTTC 57.167 33.333 0.00 0.00 0.00 2.29
660 684 9.354673 TGGAGTAGAAGATTTTTCTGTGATTTT 57.645 29.630 0.00 0.00 0.00 1.82
661 685 8.787852 GTGGAGTAGAAGATTTTTCTGTGATTT 58.212 33.333 0.00 0.00 0.00 2.17
662 686 7.118390 CGTGGAGTAGAAGATTTTTCTGTGATT 59.882 37.037 0.00 0.00 0.00 2.57
663 687 6.591834 CGTGGAGTAGAAGATTTTTCTGTGAT 59.408 38.462 0.00 0.00 0.00 3.06
664 688 5.926542 CGTGGAGTAGAAGATTTTTCTGTGA 59.073 40.000 0.00 0.00 0.00 3.58
665 689 5.696724 ACGTGGAGTAGAAGATTTTTCTGTG 59.303 40.000 0.00 0.00 0.00 3.66
666 690 5.855045 ACGTGGAGTAGAAGATTTTTCTGT 58.145 37.500 0.00 0.00 0.00 3.41
667 691 6.202954 ACAACGTGGAGTAGAAGATTTTTCTG 59.797 38.462 0.00 0.00 0.00 3.02
668 692 6.289064 ACAACGTGGAGTAGAAGATTTTTCT 58.711 36.000 0.00 0.00 0.00 2.52
669 693 6.541111 ACAACGTGGAGTAGAAGATTTTTC 57.459 37.500 0.00 0.00 0.00 2.29
670 694 6.649557 CCTACAACGTGGAGTAGAAGATTTTT 59.350 38.462 19.00 0.00 40.02 1.94
671 695 6.164176 CCTACAACGTGGAGTAGAAGATTTT 58.836 40.000 19.00 0.00 40.02 1.82
672 696 5.721232 CCTACAACGTGGAGTAGAAGATTT 58.279 41.667 19.00 0.00 40.02 2.17
673 697 4.381718 GCCTACAACGTGGAGTAGAAGATT 60.382 45.833 19.00 0.00 40.02 2.40
674 698 3.130693 GCCTACAACGTGGAGTAGAAGAT 59.869 47.826 19.00 0.00 40.02 2.40
675 699 2.490903 GCCTACAACGTGGAGTAGAAGA 59.509 50.000 19.00 0.00 40.02 2.87
676 700 2.230508 TGCCTACAACGTGGAGTAGAAG 59.769 50.000 19.00 8.77 40.02 2.85
677 701 2.241160 TGCCTACAACGTGGAGTAGAA 58.759 47.619 19.00 8.55 40.02 2.10
678 702 1.913778 TGCCTACAACGTGGAGTAGA 58.086 50.000 19.00 3.62 40.02 2.59
679 703 2.230508 TCTTGCCTACAACGTGGAGTAG 59.769 50.000 13.28 13.28 37.92 2.57
680 704 2.230508 CTCTTGCCTACAACGTGGAGTA 59.769 50.000 0.00 0.00 0.00 2.59
681 705 1.000955 CTCTTGCCTACAACGTGGAGT 59.999 52.381 0.00 0.00 0.00 3.85
682 706 1.714794 CTCTTGCCTACAACGTGGAG 58.285 55.000 0.00 0.00 0.00 3.86
683 707 0.320421 GCTCTTGCCTACAACGTGGA 60.320 55.000 0.00 0.00 0.00 4.02
684 708 0.320771 AGCTCTTGCCTACAACGTGG 60.321 55.000 0.00 0.00 40.80 4.94
685 709 2.363788 TAGCTCTTGCCTACAACGTG 57.636 50.000 0.00 0.00 40.80 4.49
686 710 3.611766 AATAGCTCTTGCCTACAACGT 57.388 42.857 0.00 0.00 40.80 3.99
687 711 3.486108 CGTAATAGCTCTTGCCTACAACG 59.514 47.826 0.00 0.00 40.80 4.10
688 712 3.245519 GCGTAATAGCTCTTGCCTACAAC 59.754 47.826 0.00 0.00 40.80 3.32
689 713 3.454375 GCGTAATAGCTCTTGCCTACAA 58.546 45.455 0.00 0.00 40.80 2.41
746 770 4.005650 TCTCCAACATGCTCATCTTTCAC 58.994 43.478 0.00 0.00 0.00 3.18
787 812 1.956477 GGAGTGCCATCTCTCTCTCTC 59.044 57.143 0.00 0.00 34.26 3.20
788 813 1.570501 AGGAGTGCCATCTCTCTCTCT 59.429 52.381 0.00 0.00 36.29 3.10
789 814 1.956477 GAGGAGTGCCATCTCTCTCTC 59.044 57.143 0.00 0.00 36.29 3.20
790 815 1.411501 GGAGGAGTGCCATCTCTCTCT 60.412 57.143 13.16 0.00 34.88 3.10
791 816 1.039856 GGAGGAGTGCCATCTCTCTC 58.960 60.000 0.00 0.00 36.29 3.20
792 817 0.754957 CGGAGGAGTGCCATCTCTCT 60.755 60.000 0.00 0.00 36.29 3.10
793 818 1.040339 ACGGAGGAGTGCCATCTCTC 61.040 60.000 0.00 0.00 36.29 3.20
794 819 1.000993 ACGGAGGAGTGCCATCTCT 59.999 57.895 0.00 0.00 36.29 3.10
795 820 1.439644 GACGGAGGAGTGCCATCTC 59.560 63.158 0.00 0.00 36.29 2.75
796 821 2.418910 CGACGGAGGAGTGCCATCT 61.419 63.158 0.00 0.00 36.29 2.90
797 822 2.105128 CGACGGAGGAGTGCCATC 59.895 66.667 0.00 0.00 36.29 3.51
798 823 2.680352 ACGACGGAGGAGTGCCAT 60.680 61.111 0.00 0.00 36.29 4.40
805 830 1.753078 CCATGGAGACGACGGAGGA 60.753 63.158 5.56 0.00 0.00 3.71
950 988 1.172180 ACGTGTGGTTGGATTGCAGG 61.172 55.000 0.00 0.00 0.00 4.85
994 1032 4.598894 CTCCCATCTCTGCGGCGG 62.599 72.222 9.78 1.35 0.00 6.13
1001 1039 1.982660 CATGCATTGCTCCCATCTCT 58.017 50.000 10.49 0.00 0.00 3.10
1032 1070 0.183971 TTCCTCCAGCACCCGAAAAA 59.816 50.000 0.00 0.00 0.00 1.94
1078 1116 7.071414 GCGATGAAAAATTCTTTTTGAAAGGG 58.929 34.615 2.54 0.00 42.51 3.95
1142 1180 9.912634 CAAAACTGATGGAATTATTACACTTGT 57.087 29.630 0.00 0.00 0.00 3.16
1160 1198 6.837312 TCAAGAAGAATAGGACCAAAACTGA 58.163 36.000 0.00 0.00 0.00 3.41
1202 1240 4.333095 CCTCTCTGATCAAATTCAGCACTG 59.667 45.833 0.00 0.00 42.37 3.66
1255 1293 6.338937 AGAATAAAGATAGTCCAACCACGAC 58.661 40.000 0.00 0.00 0.00 4.34
1258 1296 7.793036 ACCTAGAATAAAGATAGTCCAACCAC 58.207 38.462 0.00 0.00 0.00 4.16
1269 1307 9.771534 GCAGTTATTGAGACCTAGAATAAAGAT 57.228 33.333 0.00 0.00 0.00 2.40
1346 1384 2.846193 ACACCAACGCTAGACATTGTT 58.154 42.857 0.00 0.00 0.00 2.83
1464 1506 6.626302 AGGAAACAACACGATTTTTCAGAAA 58.374 32.000 0.00 0.00 30.88 2.52
1467 1509 6.885735 AAAGGAAACAACACGATTTTTCAG 57.114 33.333 0.00 0.00 30.88 3.02
1773 1841 7.432350 ACAGCTCATCAAACAAAAACAAAAA 57.568 28.000 0.00 0.00 0.00 1.94
1774 1842 7.600375 TGTACAGCTCATCAAACAAAAACAAAA 59.400 29.630 0.00 0.00 0.00 2.44
1775 1843 7.093354 TGTACAGCTCATCAAACAAAAACAAA 58.907 30.769 0.00 0.00 0.00 2.83
1776 1844 6.625362 TGTACAGCTCATCAAACAAAAACAA 58.375 32.000 0.00 0.00 0.00 2.83
1777 1845 6.201226 TGTACAGCTCATCAAACAAAAACA 57.799 33.333 0.00 0.00 0.00 2.83
1778 1846 7.649306 AGATTGTACAGCTCATCAAACAAAAAC 59.351 33.333 7.76 0.00 31.33 2.43
1794 1862 8.437360 TCCTAACATATTGCAAGATTGTACAG 57.563 34.615 3.24 8.28 0.00 2.74
1837 1905 1.897802 CTGATTTGCTGGCTCCCTTTT 59.102 47.619 0.00 0.00 0.00 2.27
2170 2240 9.399797 TGATCAACTTGCTGATTCAGTATTAAT 57.600 29.630 14.90 0.00 36.15 1.40
2171 2241 8.791327 TGATCAACTTGCTGATTCAGTATTAA 57.209 30.769 14.90 5.40 36.15 1.40
2172 2242 8.791327 TTGATCAACTTGCTGATTCAGTATTA 57.209 30.769 14.90 0.00 36.15 0.98
2173 2243 7.692460 TTGATCAACTTGCTGATTCAGTATT 57.308 32.000 14.90 0.61 36.15 1.89
2461 5605 3.004106 CCTGAAAACCAGCTCAACTTCTG 59.996 47.826 0.00 0.00 41.57 3.02
2619 5770 7.555087 ACATTTTTCTGTCCAAGAATTTGTCA 58.445 30.769 0.00 0.00 44.46 3.58
2678 5829 3.375922 CCGGCTATGTTTTTATCCGTTGT 59.624 43.478 0.00 0.00 35.52 3.32
2713 5864 1.079405 GGACGAGGCCGATGACAAA 60.079 57.895 0.00 0.00 39.50 2.83
2727 5878 6.668541 ATAAATCATTCTGTGAACTGGACG 57.331 37.500 0.00 0.00 40.97 4.79
2771 5922 7.174946 CCAAGTAAAAATGGAGCTGAGAACTAA 59.825 37.037 0.00 0.00 39.12 2.24
2772 5923 6.655003 CCAAGTAAAAATGGAGCTGAGAACTA 59.345 38.462 0.00 0.00 39.12 2.24
2992 6197 5.467668 AGTACCCGATATCCCATCAGATA 57.532 43.478 0.00 0.00 33.38 1.98
3292 6503 8.868522 TGAGGTGTATTCTTCAGATTCAAATT 57.131 30.769 0.00 0.00 0.00 1.82
3586 6822 2.865551 GTGGTTGTGCATTTTTCAGGTG 59.134 45.455 0.00 0.00 0.00 4.00
3629 8147 9.360093 CAAAAACAAAAGTCACAGTATTTACCA 57.640 29.630 0.00 0.00 0.00 3.25
3662 8181 6.677913 ACATGCCATAAAAGTCAGTGTTTAC 58.322 36.000 0.00 0.00 0.00 2.01
3887 8408 1.338020 AGCTTTTCGGCAGTTTCAAGG 59.662 47.619 0.00 0.00 34.17 3.61
3983 8504 6.529220 AGATCAGTACCTTTGCTGGAATATC 58.471 40.000 0.00 0.00 36.19 1.63
4034 8555 2.036387 ACAACCCTAAGTGGCAAAACC 58.964 47.619 0.00 0.00 39.84 3.27
4043 8564 3.696045 TGCATTGCATACAACCCTAAGT 58.304 40.909 7.38 0.00 38.99 2.24
4074 8595 6.768483 TCCTCACAAACTGATGACATTTCTA 58.232 36.000 0.00 0.00 0.00 2.10
4081 8602 5.695851 ACAAATCCTCACAAACTGATGAC 57.304 39.130 0.00 0.00 0.00 3.06
4153 8680 4.488126 AACATCGACATTTCCACAGTTG 57.512 40.909 0.00 0.00 0.00 3.16
4222 8750 2.158871 AGACCGTTTCTGCACAGGTTTA 60.159 45.455 0.00 0.00 35.00 2.01
4238 8766 2.530297 CACGTTGTTCGATGATAGACCG 59.470 50.000 0.00 0.00 42.86 4.79
4264 8792 0.527817 CGGAGTATCTTGGACGGCAC 60.528 60.000 0.00 0.00 33.73 5.01
4267 8795 1.000163 CATCCGGAGTATCTTGGACGG 60.000 57.143 11.34 0.00 41.16 4.79
4280 8808 2.564771 GATGCTTCAACATCATCCGGA 58.435 47.619 6.61 6.61 44.81 5.14
4283 8811 2.547211 CCTCGATGCTTCAACATCATCC 59.453 50.000 5.46 0.00 45.56 3.51
4361 8889 9.627123 CCAGTCCTAACATCCTCAAATAAATTA 57.373 33.333 0.00 0.00 0.00 1.40
4434 8963 7.679783 TCTGGAAATGAACTTCTGTTAGATGA 58.320 34.615 0.00 0.00 36.39 2.92
4440 8969 4.768968 CCCATCTGGAAATGAACTTCTGTT 59.231 41.667 0.00 0.00 36.82 3.16
4444 8973 5.012893 AGAACCCATCTGGAAATGAACTTC 58.987 41.667 0.00 0.00 36.88 3.01
4474 9003 4.301628 CTGGAGAAATTTTGTCAAGCACC 58.698 43.478 8.37 0.00 0.00 5.01
4543 9072 4.985538 TGCAGTTCTCAACCTTCCTAAAT 58.014 39.130 0.00 0.00 0.00 1.40
4627 9156 6.959639 AGCTTCTTGTTTCCTTGAACAATA 57.040 33.333 3.94 0.00 45.44 1.90
4669 9198 5.363292 TCAACTAAAGCATACACGGGGTATA 59.637 40.000 1.93 0.00 40.76 1.47
4671 9200 3.514706 TCAACTAAAGCATACACGGGGTA 59.485 43.478 0.00 0.00 36.16 3.69
4672 9201 2.303600 TCAACTAAAGCATACACGGGGT 59.696 45.455 0.00 0.00 0.00 4.95
4794 9324 4.287067 TGGGATCTCAAGTTCTTTAGCAGT 59.713 41.667 0.00 0.00 0.00 4.40
4907 9437 3.181506 GGAATGTCGATCAACCTTGAAGC 60.182 47.826 0.00 0.00 41.13 3.86
4942 9472 4.048504 GGCCATGACAACACAAGTTAAAC 58.951 43.478 0.00 0.00 35.85 2.01
4978 9508 6.611613 TCCTAGAGAATCAATCAACACACT 57.388 37.500 0.00 0.00 37.82 3.55
4979 9509 8.948631 TTATCCTAGAGAATCAATCAACACAC 57.051 34.615 0.00 0.00 37.82 3.82
5005 9535 6.097412 GGAAGAACATCCCATTTGATAAGCTT 59.903 38.462 3.48 3.48 33.05 3.74
5015 9545 3.790408 AGATCCAGGAAGAACATCCCATT 59.210 43.478 0.00 0.00 40.59 3.16
5119 9649 6.144854 TGCGAAAAATCTGAAATTGACTCTG 58.855 36.000 0.00 0.00 0.00 3.35
5120 9650 6.317789 TGCGAAAAATCTGAAATTGACTCT 57.682 33.333 0.00 0.00 0.00 3.24
5127 9657 5.469479 ACGGAAATGCGAAAAATCTGAAAT 58.531 33.333 0.16 0.00 0.00 2.17
5140 9670 1.386412 GCAAATGACAACGGAAATGCG 59.614 47.619 0.00 0.00 0.00 4.73
5141 9671 2.676076 AGCAAATGACAACGGAAATGC 58.324 42.857 0.00 0.00 0.00 3.56
5142 9672 5.006552 ACAAAAGCAAATGACAACGGAAATG 59.993 36.000 0.00 0.00 0.00 2.32
5143 9673 5.006552 CACAAAAGCAAATGACAACGGAAAT 59.993 36.000 0.00 0.00 0.00 2.17
5320 9851 8.356657 CAATGTTACTGTTCATCCCTGTAAAAA 58.643 33.333 0.00 0.00 31.04 1.94
5321 9852 7.040062 CCAATGTTACTGTTCATCCCTGTAAAA 60.040 37.037 0.00 0.00 31.04 1.52
5322 9853 6.432783 CCAATGTTACTGTTCATCCCTGTAAA 59.567 38.462 0.00 0.00 31.04 2.01
5323 9854 5.943416 CCAATGTTACTGTTCATCCCTGTAA 59.057 40.000 0.00 0.00 0.00 2.41
5324 9855 5.496556 CCAATGTTACTGTTCATCCCTGTA 58.503 41.667 0.00 0.00 0.00 2.74
5325 9856 4.335416 CCAATGTTACTGTTCATCCCTGT 58.665 43.478 0.00 0.00 0.00 4.00
5326 9857 3.696051 CCCAATGTTACTGTTCATCCCTG 59.304 47.826 0.00 0.00 0.00 4.45
5327 9858 3.877735 GCCCAATGTTACTGTTCATCCCT 60.878 47.826 0.00 0.00 0.00 4.20
5328 9859 2.427095 GCCCAATGTTACTGTTCATCCC 59.573 50.000 0.00 0.00 0.00 3.85
5329 9860 2.427095 GGCCCAATGTTACTGTTCATCC 59.573 50.000 0.00 0.00 0.00 3.51
5330 9861 3.088532 TGGCCCAATGTTACTGTTCATC 58.911 45.455 0.00 0.00 0.00 2.92
5331 9862 3.091545 CTGGCCCAATGTTACTGTTCAT 58.908 45.455 0.00 0.00 0.00 2.57
5332 9863 2.158534 ACTGGCCCAATGTTACTGTTCA 60.159 45.455 0.00 0.00 0.00 3.18
5333 9864 2.488153 GACTGGCCCAATGTTACTGTTC 59.512 50.000 0.00 0.00 0.00 3.18
5334 9865 2.158534 TGACTGGCCCAATGTTACTGTT 60.159 45.455 0.00 0.00 0.00 3.16
5356 9887 2.557924 GGCAATGTCACTGTTTGATCCA 59.442 45.455 0.00 0.00 36.32 3.41
5392 9923 5.715439 TCATCTTGGGATTTACCTGACAT 57.285 39.130 0.00 0.00 38.98 3.06
5428 9959 2.238144 ACTCCAGTACATGATGCTTGCT 59.762 45.455 0.00 0.00 0.00 3.91
5535 10066 3.587498 TCTTCTTCCTCTTCTTCCACCA 58.413 45.455 0.00 0.00 0.00 4.17
5542 10085 8.040727 GCTTCTAATTCTTCTTCTTCCTCTTCT 58.959 37.037 0.00 0.00 0.00 2.85
5545 10088 7.180051 TCTGCTTCTAATTCTTCTTCTTCCTCT 59.820 37.037 0.00 0.00 0.00 3.69
5581 10142 4.173924 GCCTCTGCCTCTGCCTCC 62.174 72.222 0.00 0.00 36.33 4.30
5610 10171 7.857404 TCTTCTCCTCCTTTTTCTTCTTCTA 57.143 36.000 0.00 0.00 0.00 2.10
5616 10189 4.830046 GGCTTTCTTCTCCTCCTTTTTCTT 59.170 41.667 0.00 0.00 0.00 2.52
5720 10293 3.563808 TCAAAACTAACTTCATGCGCTGT 59.436 39.130 9.73 0.00 0.00 4.40
5724 10297 7.276658 AGAGTAGATCAAAACTAACTTCATGCG 59.723 37.037 0.00 0.00 0.00 4.73
5728 10301 8.774586 GCAAAGAGTAGATCAAAACTAACTTCA 58.225 33.333 0.00 0.00 0.00 3.02
5793 10366 1.416030 GGGCAAGCCTCCTTTTTCAAA 59.584 47.619 11.40 0.00 36.10 2.69
5794 10367 1.047801 GGGCAAGCCTCCTTTTTCAA 58.952 50.000 11.40 0.00 36.10 2.69
5795 10368 0.188342 AGGGCAAGCCTCCTTTTTCA 59.812 50.000 11.40 0.00 36.10 2.69
5796 10369 0.605083 CAGGGCAAGCCTCCTTTTTC 59.395 55.000 11.40 0.00 36.10 2.29
5797 10370 0.833409 CCAGGGCAAGCCTCCTTTTT 60.833 55.000 11.40 0.00 36.10 1.94
5798 10371 1.228988 CCAGGGCAAGCCTCCTTTT 60.229 57.895 11.40 0.00 36.10 2.27
5799 10372 2.432174 GACCAGGGCAAGCCTCCTTT 62.432 60.000 11.40 0.00 36.10 3.11
5800 10373 2.860971 ACCAGGGCAAGCCTCCTT 60.861 61.111 11.40 0.00 36.10 3.36
5801 10374 3.334054 GACCAGGGCAAGCCTCCT 61.334 66.667 11.40 0.00 36.10 3.69
5802 10375 3.334054 AGACCAGGGCAAGCCTCC 61.334 66.667 11.40 0.00 36.10 4.30
5803 10376 1.846712 AAGAGACCAGGGCAAGCCTC 61.847 60.000 11.40 0.33 36.10 4.70
5804 10377 1.849823 AAGAGACCAGGGCAAGCCT 60.850 57.895 11.40 0.00 36.10 4.58
5805 10378 1.676967 CAAGAGACCAGGGCAAGCC 60.677 63.158 1.52 1.52 0.00 4.35
5806 10379 2.338785 GCAAGAGACCAGGGCAAGC 61.339 63.158 0.00 0.00 0.00 4.01
5807 10380 0.323178 ATGCAAGAGACCAGGGCAAG 60.323 55.000 0.00 0.00 38.08 4.01
5808 10381 0.322816 GATGCAAGAGACCAGGGCAA 60.323 55.000 0.00 0.00 38.08 4.52
5809 10382 1.203441 AGATGCAAGAGACCAGGGCA 61.203 55.000 0.00 0.00 39.03 5.36
5810 10383 0.747283 CAGATGCAAGAGACCAGGGC 60.747 60.000 0.00 0.00 0.00 5.19
5811 10384 0.907486 TCAGATGCAAGAGACCAGGG 59.093 55.000 0.00 0.00 0.00 4.45
5812 10385 2.354259 GTTCAGATGCAAGAGACCAGG 58.646 52.381 0.00 0.00 0.00 4.45
5813 10386 1.998315 CGTTCAGATGCAAGAGACCAG 59.002 52.381 0.00 0.00 0.00 4.00
5814 10387 1.618343 TCGTTCAGATGCAAGAGACCA 59.382 47.619 0.00 0.00 0.00 4.02
5815 10388 2.370281 TCGTTCAGATGCAAGAGACC 57.630 50.000 0.00 0.00 0.00 3.85
5825 10398 1.402968 GGTTGCATGCATCGTTCAGAT 59.597 47.619 23.37 0.00 41.01 2.90
5826 10399 0.804364 GGTTGCATGCATCGTTCAGA 59.196 50.000 23.37 0.00 0.00 3.27
5827 10400 0.522626 TGGTTGCATGCATCGTTCAG 59.477 50.000 23.37 0.00 0.00 3.02
5828 10401 1.175654 ATGGTTGCATGCATCGTTCA 58.824 45.000 23.37 14.14 0.00 3.18
5829 10402 3.631145 ATATGGTTGCATGCATCGTTC 57.369 42.857 23.37 8.75 0.00 3.95
5830 10403 5.710513 ATAATATGGTTGCATGCATCGTT 57.289 34.783 23.37 13.36 0.00 3.85
5831 10404 5.710513 AATAATATGGTTGCATGCATCGT 57.289 34.783 23.37 19.30 0.00 3.73
5832 10405 8.518151 TTTTAATAATATGGTTGCATGCATCG 57.482 30.769 23.37 0.00 0.00 3.84
5855 10428 8.160106 AGACCTTGTGATATTCTGAGACTTTTT 58.840 33.333 0.00 0.00 0.00 1.94
5856 10429 7.684529 AGACCTTGTGATATTCTGAGACTTTT 58.315 34.615 0.00 0.00 0.00 2.27
5857 10430 7.251321 AGACCTTGTGATATTCTGAGACTTT 57.749 36.000 0.00 0.00 0.00 2.66
5858 10431 6.865834 AGACCTTGTGATATTCTGAGACTT 57.134 37.500 0.00 0.00 0.00 3.01
5859 10432 6.865834 AAGACCTTGTGATATTCTGAGACT 57.134 37.500 0.00 0.00 0.00 3.24
5860 10433 9.436957 TTTAAAGACCTTGTGATATTCTGAGAC 57.563 33.333 0.00 0.00 0.00 3.36
5861 10434 9.658799 CTTTAAAGACCTTGTGATATTCTGAGA 57.341 33.333 9.77 0.00 0.00 3.27
5862 10435 9.442047 ACTTTAAAGACCTTGTGATATTCTGAG 57.558 33.333 21.92 0.00 0.00 3.35
5871 10444 9.841295 AGTTGTAATACTTTAAAGACCTTGTGA 57.159 29.630 21.92 0.00 0.00 3.58
5873 10446 9.841295 TGAGTTGTAATACTTTAAAGACCTTGT 57.159 29.630 21.92 1.55 0.00 3.16
5875 10448 9.841295 TGTGAGTTGTAATACTTTAAAGACCTT 57.159 29.630 21.92 12.89 0.00 3.50
5876 10449 9.841295 TTGTGAGTTGTAATACTTTAAAGACCT 57.159 29.630 21.92 7.44 0.00 3.85
5883 10456 9.841295 ACTCCTTTTGTGAGTTGTAATACTTTA 57.159 29.630 0.00 0.00 40.06 1.85
5884 10457 8.621286 CACTCCTTTTGTGAGTTGTAATACTTT 58.379 33.333 0.00 0.00 41.02 2.66
5885 10458 7.990886 TCACTCCTTTTGTGAGTTGTAATACTT 59.009 33.333 0.00 0.00 41.02 2.24
5886 10459 7.506114 TCACTCCTTTTGTGAGTTGTAATACT 58.494 34.615 0.00 0.00 41.02 2.12
5887 10460 7.724305 TCACTCCTTTTGTGAGTTGTAATAC 57.276 36.000 0.00 0.00 41.02 1.89
5888 10461 8.208224 TCTTCACTCCTTTTGTGAGTTGTAATA 58.792 33.333 0.00 0.00 43.98 0.98
5889 10462 7.054124 TCTTCACTCCTTTTGTGAGTTGTAAT 58.946 34.615 0.00 0.00 43.98 1.89
5890 10463 6.411376 TCTTCACTCCTTTTGTGAGTTGTAA 58.589 36.000 0.00 0.00 43.98 2.41
5891 10464 5.984725 TCTTCACTCCTTTTGTGAGTTGTA 58.015 37.500 0.00 0.00 43.98 2.41
5892 10465 4.843728 TCTTCACTCCTTTTGTGAGTTGT 58.156 39.130 0.00 0.00 43.98 3.32
5893 10466 5.818136 TTCTTCACTCCTTTTGTGAGTTG 57.182 39.130 0.00 0.00 43.98 3.16
5894 10467 6.834168 TTTTCTTCACTCCTTTTGTGAGTT 57.166 33.333 0.00 0.00 43.98 3.01
5895 10468 6.834168 TTTTTCTTCACTCCTTTTGTGAGT 57.166 33.333 0.00 0.00 43.98 3.41
5896 10469 9.801873 TTTATTTTTCTTCACTCCTTTTGTGAG 57.198 29.630 0.00 0.00 43.98 3.51
5921 10494 1.294857 GTTGTGGCATTGCGGTTTTT 58.705 45.000 1.91 0.00 0.00 1.94
5922 10495 0.531753 GGTTGTGGCATTGCGGTTTT 60.532 50.000 1.91 0.00 0.00 2.43
5923 10496 1.068921 GGTTGTGGCATTGCGGTTT 59.931 52.632 1.91 0.00 0.00 3.27
5924 10497 2.733945 GGTTGTGGCATTGCGGTT 59.266 55.556 1.91 0.00 0.00 4.44
5925 10498 3.669344 CGGTTGTGGCATTGCGGT 61.669 61.111 1.91 0.00 0.00 5.68
5926 10499 4.418401 CCGGTTGTGGCATTGCGG 62.418 66.667 1.91 0.00 0.00 5.69
5927 10500 1.653094 ATACCGGTTGTGGCATTGCG 61.653 55.000 15.04 0.00 0.00 4.85
5928 10501 0.179140 CATACCGGTTGTGGCATTGC 60.179 55.000 15.04 0.00 0.00 3.56
5929 10502 1.458398 TCATACCGGTTGTGGCATTG 58.542 50.000 15.04 0.00 0.00 2.82
5930 10503 2.208132 TTCATACCGGTTGTGGCATT 57.792 45.000 15.04 0.00 0.00 3.56
5931 10504 2.435372 ATTCATACCGGTTGTGGCAT 57.565 45.000 15.04 5.98 0.00 4.40
5932 10505 2.208132 AATTCATACCGGTTGTGGCA 57.792 45.000 15.04 3.76 0.00 4.92
5933 10506 4.439563 CCTTTAATTCATACCGGTTGTGGC 60.440 45.833 15.04 0.00 0.00 5.01
5934 10507 4.944930 TCCTTTAATTCATACCGGTTGTGG 59.055 41.667 15.04 0.00 0.00 4.17
5935 10508 5.646360 AGTCCTTTAATTCATACCGGTTGTG 59.354 40.000 15.04 13.20 0.00 3.33
5936 10509 5.812286 AGTCCTTTAATTCATACCGGTTGT 58.188 37.500 15.04 0.00 0.00 3.32
5937 10510 6.482308 CCTAGTCCTTTAATTCATACCGGTTG 59.518 42.308 15.04 11.55 0.00 3.77
5938 10511 6.408891 CCCTAGTCCTTTAATTCATACCGGTT 60.409 42.308 15.04 0.00 0.00 4.44
5939 10512 5.071384 CCCTAGTCCTTTAATTCATACCGGT 59.929 44.000 13.98 13.98 0.00 5.28
5940 10513 5.548406 CCCTAGTCCTTTAATTCATACCGG 58.452 45.833 0.00 0.00 0.00 5.28
5941 10514 4.995487 GCCCTAGTCCTTTAATTCATACCG 59.005 45.833 0.00 0.00 0.00 4.02
5942 10515 5.314529 GGCCCTAGTCCTTTAATTCATACC 58.685 45.833 0.00 0.00 0.00 2.73
5943 10516 5.314529 GGGCCCTAGTCCTTTAATTCATAC 58.685 45.833 17.04 0.00 33.65 2.39
5944 10517 5.578157 GGGCCCTAGTCCTTTAATTCATA 57.422 43.478 17.04 0.00 33.65 2.15
5945 10518 4.455070 GGGCCCTAGTCCTTTAATTCAT 57.545 45.455 17.04 0.00 33.65 2.57
5946 10519 3.945640 GGGCCCTAGTCCTTTAATTCA 57.054 47.619 17.04 0.00 33.65 2.57
5955 10528 0.178955 GGAGTCTAGGGCCCTAGTCC 60.179 65.000 44.13 39.70 44.59 3.85
5956 10529 0.854908 AGGAGTCTAGGGCCCTAGTC 59.145 60.000 44.13 39.91 44.59 2.59
5957 10530 2.225715 TAGGAGTCTAGGGCCCTAGT 57.774 55.000 44.13 32.88 44.59 2.57
5958 10531 2.650322 TGATAGGAGTCTAGGGCCCTAG 59.350 54.545 42.52 42.52 45.38 3.02
5959 10532 2.727024 TGATAGGAGTCTAGGGCCCTA 58.273 52.381 30.08 30.08 35.91 3.53
5960 10533 1.547099 TGATAGGAGTCTAGGGCCCT 58.453 55.000 31.35 31.35 0.00 5.19
5961 10534 2.183679 CATGATAGGAGTCTAGGGCCC 58.816 57.143 16.46 16.46 0.00 5.80
5962 10535 2.896039 ACATGATAGGAGTCTAGGGCC 58.104 52.381 0.00 0.00 0.00 5.80
5963 10536 5.482175 ACATAACATGATAGGAGTCTAGGGC 59.518 44.000 0.00 0.00 0.00 5.19
5964 10537 6.721668 TCACATAACATGATAGGAGTCTAGGG 59.278 42.308 0.00 0.00 0.00 3.53
5965 10538 7.767250 TCACATAACATGATAGGAGTCTAGG 57.233 40.000 0.00 0.00 0.00 3.02
5966 10539 9.018582 TGATCACATAACATGATAGGAGTCTAG 57.981 37.037 0.00 0.00 36.92 2.43
5967 10540 8.797438 GTGATCACATAACATGATAGGAGTCTA 58.203 37.037 21.07 0.00 36.92 2.59
5968 10541 7.256119 GGTGATCACATAACATGATAGGAGTCT 60.256 40.741 26.47 0.00 36.92 3.24
5969 10542 6.870965 GGTGATCACATAACATGATAGGAGTC 59.129 42.308 26.47 0.00 36.92 3.36
5970 10543 6.327365 TGGTGATCACATAACATGATAGGAGT 59.673 38.462 26.47 0.00 36.92 3.85
5971 10544 6.762333 TGGTGATCACATAACATGATAGGAG 58.238 40.000 26.47 0.00 36.92 3.69
5972 10545 6.745794 TGGTGATCACATAACATGATAGGA 57.254 37.500 26.47 0.00 36.92 2.94
5973 10546 6.596888 GGATGGTGATCACATAACATGATAGG 59.403 42.308 26.47 0.00 36.92 2.57
5974 10547 7.163441 TGGATGGTGATCACATAACATGATAG 58.837 38.462 26.47 0.00 36.92 2.08
5975 10548 7.077050 TGGATGGTGATCACATAACATGATA 57.923 36.000 26.47 7.04 36.92 2.15
5976 10549 5.944135 TGGATGGTGATCACATAACATGAT 58.056 37.500 26.47 5.57 39.54 2.45
5977 10550 5.370875 TGGATGGTGATCACATAACATGA 57.629 39.130 26.47 7.41 0.00 3.07
5978 10551 6.267817 GTTTGGATGGTGATCACATAACATG 58.732 40.000 26.47 0.00 0.00 3.21
5979 10552 5.360714 GGTTTGGATGGTGATCACATAACAT 59.639 40.000 26.47 19.29 0.00 2.71
5980 10553 4.704540 GGTTTGGATGGTGATCACATAACA 59.295 41.667 26.47 15.53 0.00 2.41
5981 10554 4.201910 CGGTTTGGATGGTGATCACATAAC 60.202 45.833 26.47 17.67 0.00 1.89
5982 10555 3.944650 CGGTTTGGATGGTGATCACATAA 59.055 43.478 26.47 12.32 0.00 1.90
5983 10556 3.540617 CGGTTTGGATGGTGATCACATA 58.459 45.455 26.47 15.39 0.00 2.29
5984 10557 2.368439 CGGTTTGGATGGTGATCACAT 58.632 47.619 26.47 17.30 0.00 3.21
5985 10558 1.612991 CCGGTTTGGATGGTGATCACA 60.613 52.381 26.47 13.45 42.00 3.58
5986 10559 1.094785 CCGGTTTGGATGGTGATCAC 58.905 55.000 17.91 17.91 42.00 3.06
5987 10560 0.695924 ACCGGTTTGGATGGTGATCA 59.304 50.000 0.00 0.00 42.00 2.92
5988 10561 1.472480 CAACCGGTTTGGATGGTGATC 59.528 52.381 19.55 0.00 42.00 2.92
5989 10562 1.074727 TCAACCGGTTTGGATGGTGAT 59.925 47.619 19.55 0.00 40.78 3.06
5990 10563 0.474614 TCAACCGGTTTGGATGGTGA 59.525 50.000 19.55 7.23 40.78 4.02
5991 10564 1.323412 TTCAACCGGTTTGGATGGTG 58.677 50.000 19.55 4.44 40.78 4.17
5992 10565 2.302587 ATTCAACCGGTTTGGATGGT 57.697 45.000 19.55 0.00 40.78 3.55
5993 10566 4.023193 GCTATATTCAACCGGTTTGGATGG 60.023 45.833 19.55 11.58 40.78 3.51
5994 10567 4.578516 TGCTATATTCAACCGGTTTGGATG 59.421 41.667 19.55 7.05 41.73 3.51
5995 10568 4.787551 TGCTATATTCAACCGGTTTGGAT 58.212 39.130 19.55 15.43 42.00 3.41
5996 10569 4.223556 TGCTATATTCAACCGGTTTGGA 57.776 40.909 19.55 10.51 42.00 3.53
5997 10570 4.338118 ACATGCTATATTCAACCGGTTTGG 59.662 41.667 19.55 7.84 46.41 3.28
5998 10571 5.273170 CACATGCTATATTCAACCGGTTTG 58.727 41.667 19.55 13.53 36.42 2.93
5999 10572 4.202010 GCACATGCTATATTCAACCGGTTT 60.202 41.667 19.55 6.11 38.21 3.27
6000 10573 3.315191 GCACATGCTATATTCAACCGGTT 59.685 43.478 15.86 15.86 38.21 4.44
6001 10574 2.878406 GCACATGCTATATTCAACCGGT 59.122 45.455 0.00 0.00 38.21 5.28
6002 10575 3.542712 GCACATGCTATATTCAACCGG 57.457 47.619 0.00 0.00 38.21 5.28
6015 10588 4.321008 CCAATGGAAGATGATAGCACATGC 60.321 45.833 0.00 0.00 42.49 4.06
6016 10589 4.825634 ACCAATGGAAGATGATAGCACATG 59.174 41.667 6.16 0.00 0.00 3.21
6017 10590 5.057843 ACCAATGGAAGATGATAGCACAT 57.942 39.130 6.16 0.00 0.00 3.21
6018 10591 4.508551 ACCAATGGAAGATGATAGCACA 57.491 40.909 6.16 0.00 0.00 4.57
6019 10592 4.498682 GCAACCAATGGAAGATGATAGCAC 60.499 45.833 6.16 0.00 0.00 4.40
6020 10593 3.633525 GCAACCAATGGAAGATGATAGCA 59.366 43.478 6.16 0.00 0.00 3.49
6021 10594 3.633525 TGCAACCAATGGAAGATGATAGC 59.366 43.478 6.16 0.00 0.00 2.97
6022 10595 5.179045 GTGCAACCAATGGAAGATGATAG 57.821 43.478 6.16 0.00 0.00 2.08
6038 10611 2.364002 ACAACTGGTTAATGGGTGCAAC 59.636 45.455 0.00 0.00 0.00 4.17
6039 10612 2.672098 ACAACTGGTTAATGGGTGCAA 58.328 42.857 0.00 0.00 0.00 4.08
6040 10613 2.373335 ACAACTGGTTAATGGGTGCA 57.627 45.000 0.00 0.00 0.00 4.57
6041 10614 3.570550 TGTTACAACTGGTTAATGGGTGC 59.429 43.478 0.00 0.00 0.00 5.01
6042 10615 4.022676 GGTGTTACAACTGGTTAATGGGTG 60.023 45.833 0.00 0.00 0.00 4.61
6043 10616 4.146564 GGTGTTACAACTGGTTAATGGGT 58.853 43.478 0.00 0.00 0.00 4.51
6044 10617 3.508402 GGGTGTTACAACTGGTTAATGGG 59.492 47.826 0.00 0.00 0.00 4.00
6045 10618 4.022676 GTGGGTGTTACAACTGGTTAATGG 60.023 45.833 0.00 0.00 0.00 3.16
6046 10619 4.580995 TGTGGGTGTTACAACTGGTTAATG 59.419 41.667 0.00 0.00 0.00 1.90
6047 10620 4.794334 TGTGGGTGTTACAACTGGTTAAT 58.206 39.130 0.00 0.00 0.00 1.40
6048 10621 4.232188 TGTGGGTGTTACAACTGGTTAA 57.768 40.909 0.00 0.00 0.00 2.01
6049 10622 3.928005 TGTGGGTGTTACAACTGGTTA 57.072 42.857 0.00 0.00 0.00 2.85
6050 10623 2.810870 TGTGGGTGTTACAACTGGTT 57.189 45.000 0.00 0.00 0.00 3.67
6051 10624 2.810870 TTGTGGGTGTTACAACTGGT 57.189 45.000 0.00 0.00 33.43 4.00
6052 10625 2.288152 GCATTGTGGGTGTTACAACTGG 60.288 50.000 0.00 0.00 40.47 4.00
6053 10626 2.604373 CGCATTGTGGGTGTTACAACTG 60.604 50.000 0.00 0.00 40.47 3.16
6054 10627 1.606668 CGCATTGTGGGTGTTACAACT 59.393 47.619 0.00 0.00 40.47 3.16
6055 10628 1.335506 CCGCATTGTGGGTGTTACAAC 60.336 52.381 8.45 0.00 40.47 3.32
6103 10676 2.434336 ACCATGCGGCTATGTCTCTAAA 59.566 45.455 0.00 0.00 34.57 1.85
6110 10683 1.071471 GCCTACCATGCGGCTATGT 59.929 57.895 0.00 0.00 42.98 2.29
6178 10752 5.817816 CGATTGTAAGCCAACTCTTTATCCT 59.182 40.000 0.00 0.00 35.44 3.24
6293 10867 2.753452 GACGATCGGGGATCTAGCATTA 59.247 50.000 20.98 0.00 36.96 1.90
6340 10914 5.876460 GGCCGTTACTATGTTTCTTTTCCTA 59.124 40.000 0.00 0.00 0.00 2.94
6414 10988 0.172803 GTTGTAGGTGCCGACGAGAT 59.827 55.000 0.00 0.00 0.00 2.75
6416 10990 0.732880 CAGTTGTAGGTGCCGACGAG 60.733 60.000 0.00 0.00 0.00 4.18
6419 10993 1.263217 CAAACAGTTGTAGGTGCCGAC 59.737 52.381 0.00 0.00 0.00 4.79
6491 11065 6.779049 TCTCCGACCCATAAGCTTAAATAGTA 59.221 38.462 10.85 0.00 0.00 1.82
6511 11085 0.818296 CCACCTCACTACCTTCTCCG 59.182 60.000 0.00 0.00 0.00 4.63
6546 11121 8.808529 GCGTATGTTAGCCTTCATATATACTTG 58.191 37.037 0.00 0.00 0.00 3.16
6550 11125 9.884636 ATTTGCGTATGTTAGCCTTCATATATA 57.115 29.630 0.00 0.00 0.00 0.86
6558 11133 5.007724 GCTCTTATTTGCGTATGTTAGCCTT 59.992 40.000 0.00 0.00 0.00 4.35
6559 11134 4.511826 GCTCTTATTTGCGTATGTTAGCCT 59.488 41.667 0.00 0.00 0.00 4.58
6594 11169 0.450583 AGCTTCTCGATCGTGCGTAA 59.549 50.000 15.94 2.49 0.00 3.18
6595 11170 1.292992 TAGCTTCTCGATCGTGCGTA 58.707 50.000 15.94 7.36 0.00 4.42
6603 11180 7.517614 TCTTGATCACTTATAGCTTCTCGAT 57.482 36.000 0.00 0.00 0.00 3.59
6686 11263 0.970937 ATGGTCTCTCTTCGGCGGAA 60.971 55.000 7.21 6.53 0.00 4.30
6696 11273 1.103803 TGTAGCCGTGATGGTCTCTC 58.896 55.000 0.00 0.00 41.21 3.20
6774 11351 2.601240 TGTGGCAGATGGGAATTTGA 57.399 45.000 0.00 0.00 0.00 2.69
6805 11382 3.064958 GGGTATAAACTTTCAAGAGCCGC 59.935 47.826 0.00 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.