Multiple sequence alignment - TraesCS6A01G198100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G198100 chr6A 100.000 5206 0 0 1 5206 301946325 301951530 0.000000e+00 9614.0
1 TraesCS6A01G198100 chr6A 100.000 2110 0 0 5614 7723 301951938 301954047 0.000000e+00 3897.0
2 TraesCS6A01G198100 chr6A 97.531 81 2 0 4829 4909 301951074 301951154 1.050000e-28 139.0
3 TraesCS6A01G198100 chr6A 97.531 81 2 0 4750 4830 301951153 301951233 1.050000e-28 139.0
4 TraesCS6A01G198100 chr6D 97.507 2487 36 10 830 3296 211440807 211443287 0.000000e+00 4226.0
5 TraesCS6A01G198100 chr6D 96.639 1547 31 9 5614 7142 211444606 211446149 0.000000e+00 2549.0
6 TraesCS6A01G198100 chr6D 96.376 607 16 4 4229 4830 211443285 211443890 0.000000e+00 994.0
7 TraesCS6A01G198100 chr6D 96.122 361 14 0 4829 5189 211443810 211444170 2.400000e-164 590.0
8 TraesCS6A01G198100 chr6D 94.721 341 10 3 463 797 211440470 211440808 2.470000e-144 523.0
9 TraesCS6A01G198100 chr6D 91.153 373 16 5 7286 7643 211446207 211446577 2.500000e-134 490.0
10 TraesCS6A01G198100 chr6D 84.188 234 17 11 5681 5902 211445047 211445272 7.850000e-50 209.0
11 TraesCS6A01G198100 chr6D 95.455 44 2 0 5614 5657 249454666 249454623 3.870000e-08 71.3
12 TraesCS6A01G198100 chr6D 91.111 45 4 0 741 785 312689968 312689924 2.330000e-05 62.1
13 TraesCS6A01G198100 chr6B 95.910 2494 52 14 846 3296 378290333 378287847 0.000000e+00 3995.0
14 TraesCS6A01G198100 chr6B 96.812 1098 31 2 6117 7213 378285672 378284578 0.000000e+00 1831.0
15 TraesCS6A01G198100 chr6B 93.624 941 55 5 3292 4229 526799773 526800711 0.000000e+00 1400.0
16 TraesCS6A01G198100 chr6B 87.834 937 67 15 3296 4227 702388020 702388914 0.000000e+00 1055.0
17 TraesCS6A01G198100 chr6B 90.989 566 29 16 273 830 378291854 378291303 0.000000e+00 743.0
18 TraesCS6A01G198100 chr6B 86.326 724 40 22 5614 6284 378286801 378286084 0.000000e+00 734.0
19 TraesCS6A01G198100 chr6B 96.193 394 9 3 4229 4617 378287849 378287457 2.350000e-179 640.0
20 TraesCS6A01G198100 chr6B 91.793 463 17 6 5619 6060 378286391 378285929 6.580000e-175 625.0
21 TraesCS6A01G198100 chr6B 96.296 378 13 1 4829 5206 378287275 378286899 3.060000e-173 619.0
22 TraesCS6A01G198100 chr6B 95.019 261 6 4 4573 4830 378287451 378287195 3.360000e-108 403.0
23 TraesCS6A01G198100 chr6B 92.537 268 8 3 5791 6047 378285934 378285668 2.630000e-99 374.0
24 TraesCS6A01G198100 chr6B 83.250 400 50 12 7334 7722 378281746 378281353 1.230000e-92 351.0
25 TraesCS6A01G198100 chr6B 86.861 137 9 5 5767 5902 378285654 378285526 2.250000e-30 145.0
26 TraesCS6A01G198100 chr6B 88.608 79 4 2 4964 5042 255522208 255522281 2.970000e-14 91.6
27 TraesCS6A01G198100 chr6B 88.462 78 4 2 4964 5041 255522279 255522207 1.070000e-13 89.8
28 TraesCS6A01G198100 chr1D 96.081 944 34 3 3294 4234 222342455 222341512 0.000000e+00 1535.0
29 TraesCS6A01G198100 chr1D 92.405 79 3 1 4964 5042 189883096 189883171 8.190000e-20 110.0
30 TraesCS6A01G198100 chr2D 93.682 918 54 4 3322 4236 357988015 357988931 0.000000e+00 1371.0
31 TraesCS6A01G198100 chr2D 93.514 370 23 1 3868 4236 357996623 357996992 4.070000e-152 549.0
32 TraesCS6A01G198100 chr2D 90.780 282 24 2 1 282 392464474 392464753 7.320000e-100 375.0
33 TraesCS6A01G198100 chr2D 90.210 286 28 0 1 286 340081654 340081369 2.630000e-99 374.0
34 TraesCS6A01G198100 chr2D 90.000 80 8 0 5614 5693 555221057 555220978 3.810000e-18 104.0
35 TraesCS6A01G198100 chr2D 94.545 55 3 0 5975 6029 578043188 578043242 1.380000e-12 86.1
36 TraesCS6A01G198100 chr2A 92.405 948 58 6 3294 4232 167231714 167230772 0.000000e+00 1339.0
37 TraesCS6A01G198100 chr2A 84.821 112 5 6 5939 6038 482695749 482695860 1.370000e-17 102.0
38 TraesCS6A01G198100 chr2A 83.186 113 17 2 7604 7715 598963061 598963172 1.370000e-17 102.0
39 TraesCS6A01G198100 chr2A 95.455 44 2 0 5614 5657 410289086 410289043 3.870000e-08 71.3
40 TraesCS6A01G198100 chr4B 92.136 941 67 5 3292 4229 472270553 472271489 0.000000e+00 1321.0
41 TraesCS6A01G198100 chr4B 78.814 118 17 7 667 781 57519592 57519704 1.080000e-08 73.1
42 TraesCS6A01G198100 chr4B 93.878 49 2 1 5650 5698 63757164 63757117 1.080000e-08 73.1
43 TraesCS6A01G198100 chr4A 87.473 934 81 17 3304 4231 744318275 744319178 0.000000e+00 1044.0
44 TraesCS6A01G198100 chr7D 94.492 581 27 5 3296 3874 46522316 46522893 0.000000e+00 891.0
45 TraesCS6A01G198100 chr7D 91.197 284 25 0 1 284 195830014 195830297 3.380000e-103 387.0
46 TraesCS6A01G198100 chr7D 88.502 287 20 4 7291 7565 484832105 484832390 1.240000e-87 335.0
47 TraesCS6A01G198100 chr7D 91.525 59 5 0 5980 6038 213784873 213784815 1.790000e-11 82.4
48 TraesCS6A01G198100 chr7D 82.500 80 13 1 5619 5698 264972479 264972401 1.390000e-07 69.4
49 TraesCS6A01G198100 chr2B 92.294 558 40 3 3674 4229 796676117 796676673 0.000000e+00 789.0
50 TraesCS6A01G198100 chrUn 100.000 414 0 0 2383 2796 477342979 477343392 0.000000e+00 765.0
51 TraesCS6A01G198100 chr1B 81.942 958 120 39 3293 4230 188463087 188462163 0.000000e+00 761.0
52 TraesCS6A01G198100 chr1B 83.696 460 31 12 7289 7722 296287557 296287116 2.020000e-105 394.0
53 TraesCS6A01G198100 chr3D 81.818 627 70 19 3295 3914 41720582 41719993 3.240000e-133 486.0
54 TraesCS6A01G198100 chr3D 91.289 287 25 0 1 287 400576325 400576611 7.270000e-105 392.0
55 TraesCS6A01G198100 chr3D 92.308 78 6 0 4964 5041 135868943 135868866 2.280000e-20 111.0
56 TraesCS6A01G198100 chr3D 87.640 89 5 2 4964 5047 250931573 250931486 1.770000e-16 99.0
57 TraesCS6A01G198100 chr3D 95.455 44 2 0 5614 5657 179913683 179913726 3.870000e-08 71.3
58 TraesCS6A01G198100 chr5D 91.901 284 20 3 1 282 249597194 249596912 2.020000e-105 394.0
59 TraesCS6A01G198100 chr5D 90.909 286 23 3 1 283 13348220 13347935 1.570000e-101 381.0
60 TraesCS6A01G198100 chr5D 90.175 285 28 0 1 285 160921379 160921095 9.470000e-99 372.0
61 TraesCS6A01G198100 chr3A 86.016 379 33 9 7363 7722 99299396 99299773 9.400000e-104 388.0
62 TraesCS6A01G198100 chr3A 91.379 58 3 1 7315 7370 99299143 99299200 2.310000e-10 78.7
63 TraesCS6A01G198100 chr3B 83.223 453 39 14 7289 7722 617248847 617248413 1.570000e-101 381.0
64 TraesCS6A01G198100 chr3B 82.166 157 22 5 7294 7446 190482213 190482059 6.290000e-26 130.0
65 TraesCS6A01G198100 chr4D 90.102 293 26 3 1 292 5833849 5833559 2.030000e-100 377.0
66 TraesCS6A01G198100 chr4D 95.238 42 2 0 740 781 39256767 39256808 5.000000e-07 67.6
67 TraesCS6A01G198100 chr5A 90.426 282 26 1 1 282 127300543 127300263 3.400000e-98 370.0
68 TraesCS6A01G198100 chr5A 88.889 81 4 2 4964 5040 584453904 584453983 2.290000e-15 95.3
69 TraesCS6A01G198100 chr5A 93.750 48 3 0 5650 5697 572843107 572843154 1.080000e-08 73.1
70 TraesCS6A01G198100 chr5A 93.182 44 2 1 5970 6012 425456390 425456433 6.470000e-06 63.9
71 TraesCS6A01G198100 chr7A 89.818 275 27 1 3963 4236 112120110 112120384 1.230000e-92 351.0
72 TraesCS6A01G198100 chr7A 91.525 59 5 0 5980 6038 225617022 225616964 1.790000e-11 82.4
73 TraesCS6A01G198100 chr7B 85.075 201 20 3 7369 7561 618792232 618792430 6.110000e-46 196.0
74 TraesCS6A01G198100 chr7B 90.244 82 4 1 4963 5040 450642197 450642116 3.810000e-18 104.0
75 TraesCS6A01G198100 chr7B 91.525 59 5 0 5980 6038 187783553 187783611 1.790000e-11 82.4
76 TraesCS6A01G198100 chr1A 95.455 44 2 0 5614 5657 292082668 292082711 3.870000e-08 71.3
77 TraesCS6A01G198100 chr1A 81.373 102 6 3 5614 5702 554284274 554284375 3.870000e-08 71.3
78 TraesCS6A01G198100 chr1A 90.741 54 4 1 5653 5705 554289368 554289315 3.870000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G198100 chr6A 301946325 301954047 7722 False 3447.250000 9614 98.765500 1 7723 4 chr6A.!!$F1 7722
1 TraesCS6A01G198100 chr6D 211440470 211446577 6107 False 1368.714286 4226 93.815143 463 7643 7 chr6D.!!$F1 7180
2 TraesCS6A01G198100 chr6B 526799773 526800711 938 False 1400.000000 1400 93.624000 3292 4229 1 chr6B.!!$F2 937
3 TraesCS6A01G198100 chr6B 702388020 702388914 894 False 1055.000000 1055 87.834000 3296 4227 1 chr6B.!!$F3 931
4 TraesCS6A01G198100 chr6B 378281353 378291854 10501 True 950.909091 3995 91.998727 273 7722 11 chr6B.!!$R2 7449
5 TraesCS6A01G198100 chr1D 222341512 222342455 943 True 1535.000000 1535 96.081000 3294 4234 1 chr1D.!!$R1 940
6 TraesCS6A01G198100 chr2D 357988015 357988931 916 False 1371.000000 1371 93.682000 3322 4236 1 chr2D.!!$F1 914
7 TraesCS6A01G198100 chr2A 167230772 167231714 942 True 1339.000000 1339 92.405000 3294 4232 1 chr2A.!!$R1 938
8 TraesCS6A01G198100 chr4B 472270553 472271489 936 False 1321.000000 1321 92.136000 3292 4229 1 chr4B.!!$F2 937
9 TraesCS6A01G198100 chr4A 744318275 744319178 903 False 1044.000000 1044 87.473000 3304 4231 1 chr4A.!!$F1 927
10 TraesCS6A01G198100 chr7D 46522316 46522893 577 False 891.000000 891 94.492000 3296 3874 1 chr7D.!!$F1 578
11 TraesCS6A01G198100 chr2B 796676117 796676673 556 False 789.000000 789 92.294000 3674 4229 1 chr2B.!!$F1 555
12 TraesCS6A01G198100 chr1B 188462163 188463087 924 True 761.000000 761 81.942000 3293 4230 1 chr1B.!!$R1 937
13 TraesCS6A01G198100 chr3D 41719993 41720582 589 True 486.000000 486 81.818000 3295 3914 1 chr3D.!!$R1 619
14 TraesCS6A01G198100 chr3A 99299143 99299773 630 False 233.350000 388 88.697500 7315 7722 2 chr3A.!!$F1 407

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
233 234 0.041312 GCATCGCACACAGTTTCGTT 60.041 50.000 0.00 0.0 0.00 3.85 F
1196 2184 0.037232 AAAAAGCTAGAGGACGCGCT 60.037 50.000 5.73 0.0 0.00 5.92 F
1903 2891 0.321034 TGGCTGTGACTGTGATCTGC 60.321 55.000 0.00 0.0 0.00 4.26 F
1935 2923 0.839946 TCTATTCAAGGAGCCCAGGC 59.160 55.000 0.00 0.0 42.33 4.85 F
2030 3018 1.211949 GTATGGTGCTGGGTGGTATGT 59.788 52.381 0.00 0.0 0.00 2.29 F
3601 4620 2.109181 GATTCTTCCCCCGCTCCG 59.891 66.667 0.00 0.0 0.00 4.63 F
4524 5574 0.324943 GGGGCAGAGTAGCACTTTCA 59.675 55.000 0.00 0.0 38.23 2.69 F
5717 6837 1.127951 AGCGTAAACAATGTACTGCGC 59.872 47.619 18.10 18.1 43.29 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1599 2587 1.678360 CTCAAATCGCTGCACACAAC 58.322 50.000 0.00 0.00 0.0 3.32 R
3132 4145 3.876914 CCATGTAATACACGTCCAATGCT 59.123 43.478 0.00 0.00 0.0 3.79 R
3548 4563 2.579201 CCCGAGCTTGGATGACGT 59.421 61.111 22.68 0.00 0.0 4.34 R
3601 4620 3.941657 GAGGGAGCAGCGGTGTCAC 62.942 68.421 17.07 13.13 0.0 3.67 R
4335 5381 4.959839 TGGGAAAAACTAAAAAGGTGCTCT 59.040 37.500 0.00 0.00 0.0 4.09 R
5905 7032 0.038801 GGCTTTCCTTTGTCTGCAGC 60.039 55.000 9.47 4.92 0.0 5.25 R
5916 7043 1.021968 GTCGTGTTTGTGGCTTTCCT 58.978 50.000 0.00 0.00 0.0 3.36 R
7660 12351 0.110486 ACAGGTTTCGGCCATGTCTT 59.890 50.000 2.24 0.00 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.768659 GTTCATCTCAGCGAACTGTATG 57.231 45.455 0.00 0.00 44.77 2.39
22 23 4.177026 GTTCATCTCAGCGAACTGTATGT 58.823 43.478 0.00 0.00 44.77 2.29
23 24 4.033990 TCATCTCAGCGAACTGTATGTC 57.966 45.455 0.00 0.00 44.77 3.06
24 25 2.544480 TCTCAGCGAACTGTATGTCG 57.456 50.000 0.00 0.00 44.77 4.35
25 26 1.810755 TCTCAGCGAACTGTATGTCGT 59.189 47.619 2.78 0.00 44.77 4.34
26 27 3.004862 TCTCAGCGAACTGTATGTCGTA 58.995 45.455 2.78 0.00 44.77 3.43
27 28 3.626217 TCTCAGCGAACTGTATGTCGTAT 59.374 43.478 2.78 0.00 44.77 3.06
28 29 4.812626 TCTCAGCGAACTGTATGTCGTATA 59.187 41.667 2.78 0.00 44.77 1.47
29 30 5.469084 TCTCAGCGAACTGTATGTCGTATAT 59.531 40.000 2.78 0.00 44.77 0.86
30 31 6.017357 TCTCAGCGAACTGTATGTCGTATATT 60.017 38.462 2.78 0.00 44.77 1.28
31 32 5.912955 TCAGCGAACTGTATGTCGTATATTG 59.087 40.000 2.78 0.00 44.77 1.90
32 33 4.680110 AGCGAACTGTATGTCGTATATTGC 59.320 41.667 2.78 0.00 0.00 3.56
33 34 4.443063 GCGAACTGTATGTCGTATATTGCA 59.557 41.667 2.78 0.00 0.00 4.08
34 35 5.609696 GCGAACTGTATGTCGTATATTGCAC 60.610 44.000 2.78 0.00 0.00 4.57
35 36 5.457473 CGAACTGTATGTCGTATATTGCACA 59.543 40.000 0.00 0.00 0.00 4.57
36 37 6.559703 CGAACTGTATGTCGTATATTGCACAC 60.560 42.308 0.00 0.00 0.00 3.82
37 38 5.656480 ACTGTATGTCGTATATTGCACACA 58.344 37.500 0.00 0.00 0.00 3.72
38 39 5.518847 ACTGTATGTCGTATATTGCACACAC 59.481 40.000 0.00 0.00 0.00 3.82
39 40 5.411781 TGTATGTCGTATATTGCACACACA 58.588 37.500 0.00 0.00 0.00 3.72
40 41 6.045955 TGTATGTCGTATATTGCACACACAT 58.954 36.000 0.00 0.00 0.00 3.21
41 42 6.536941 TGTATGTCGTATATTGCACACACATT 59.463 34.615 0.00 0.00 0.00 2.71
42 43 5.215239 TGTCGTATATTGCACACACATTG 57.785 39.130 0.00 0.00 0.00 2.82
43 44 4.932200 TGTCGTATATTGCACACACATTGA 59.068 37.500 0.00 0.00 0.00 2.57
44 45 5.584251 TGTCGTATATTGCACACACATTGAT 59.416 36.000 0.00 0.00 0.00 2.57
45 46 6.758886 TGTCGTATATTGCACACACATTGATA 59.241 34.615 0.00 0.00 0.00 2.15
46 47 7.063456 GTCGTATATTGCACACACATTGATAC 58.937 38.462 0.00 0.00 0.00 2.24
47 48 6.064525 CGTATATTGCACACACATTGATACG 58.935 40.000 0.00 0.00 35.30 3.06
48 49 3.763097 ATTGCACACACATTGATACGG 57.237 42.857 0.00 0.00 0.00 4.02
49 50 2.177394 TGCACACACATTGATACGGT 57.823 45.000 0.00 0.00 0.00 4.83
50 51 1.803555 TGCACACACATTGATACGGTG 59.196 47.619 0.00 0.00 38.47 4.94
51 52 1.130373 GCACACACATTGATACGGTGG 59.870 52.381 0.00 0.00 36.87 4.61
52 53 2.422597 CACACACATTGATACGGTGGT 58.577 47.619 0.00 0.00 36.87 4.16
53 54 2.415168 CACACACATTGATACGGTGGTC 59.585 50.000 0.00 0.00 36.87 4.02
54 55 2.006888 CACACATTGATACGGTGGTCC 58.993 52.381 0.00 0.00 36.87 4.46
65 66 3.089788 GGTGGTCCGTTTCTGTTGT 57.910 52.632 0.00 0.00 0.00 3.32
66 67 1.385528 GGTGGTCCGTTTCTGTTGTT 58.614 50.000 0.00 0.00 0.00 2.83
67 68 1.332686 GGTGGTCCGTTTCTGTTGTTC 59.667 52.381 0.00 0.00 0.00 3.18
68 69 2.285977 GTGGTCCGTTTCTGTTGTTCT 58.714 47.619 0.00 0.00 0.00 3.01
69 70 2.031683 GTGGTCCGTTTCTGTTGTTCTG 59.968 50.000 0.00 0.00 0.00 3.02
70 71 1.002792 GGTCCGTTTCTGTTGTTCTGC 60.003 52.381 0.00 0.00 0.00 4.26
71 72 1.668751 GTCCGTTTCTGTTGTTCTGCA 59.331 47.619 0.00 0.00 0.00 4.41
72 73 2.290641 GTCCGTTTCTGTTGTTCTGCAT 59.709 45.455 0.00 0.00 0.00 3.96
73 74 2.548057 TCCGTTTCTGTTGTTCTGCATC 59.452 45.455 0.00 0.00 0.00 3.91
74 75 2.290367 CCGTTTCTGTTGTTCTGCATCA 59.710 45.455 0.00 0.00 0.00 3.07
75 76 3.058016 CCGTTTCTGTTGTTCTGCATCAT 60.058 43.478 0.00 0.00 0.00 2.45
76 77 4.153986 CGTTTCTGTTGTTCTGCATCATC 58.846 43.478 0.00 0.00 0.00 2.92
77 78 4.153986 GTTTCTGTTGTTCTGCATCATCG 58.846 43.478 0.00 0.00 0.00 3.84
78 79 3.044235 TCTGTTGTTCTGCATCATCGT 57.956 42.857 0.00 0.00 0.00 3.73
79 80 4.186856 TCTGTTGTTCTGCATCATCGTA 57.813 40.909 0.00 0.00 0.00 3.43
80 81 4.565022 TCTGTTGTTCTGCATCATCGTAA 58.435 39.130 0.00 0.00 0.00 3.18
81 82 4.994217 TCTGTTGTTCTGCATCATCGTAAA 59.006 37.500 0.00 0.00 0.00 2.01
82 83 5.029650 TGTTGTTCTGCATCATCGTAAAC 57.970 39.130 0.00 0.00 0.00 2.01
83 84 4.513318 TGTTGTTCTGCATCATCGTAAACA 59.487 37.500 0.00 0.00 0.00 2.83
84 85 4.926860 TGTTCTGCATCATCGTAAACAG 57.073 40.909 0.00 0.00 0.00 3.16
85 86 4.314961 TGTTCTGCATCATCGTAAACAGT 58.685 39.130 0.00 0.00 0.00 3.55
86 87 4.754618 TGTTCTGCATCATCGTAAACAGTT 59.245 37.500 0.00 0.00 0.00 3.16
87 88 5.107104 TGTTCTGCATCATCGTAAACAGTTC 60.107 40.000 0.00 0.00 0.00 3.01
88 89 4.820897 TCTGCATCATCGTAAACAGTTCT 58.179 39.130 0.00 0.00 0.00 3.01
89 90 5.961272 TCTGCATCATCGTAAACAGTTCTA 58.039 37.500 0.00 0.00 0.00 2.10
90 91 5.805486 TCTGCATCATCGTAAACAGTTCTAC 59.195 40.000 0.00 0.00 0.00 2.59
91 92 5.720202 TGCATCATCGTAAACAGTTCTACT 58.280 37.500 0.00 0.00 0.00 2.57
92 93 6.859017 TGCATCATCGTAAACAGTTCTACTA 58.141 36.000 0.00 0.00 0.00 1.82
93 94 6.972901 TGCATCATCGTAAACAGTTCTACTAG 59.027 38.462 0.00 0.00 0.00 2.57
94 95 7.148137 TGCATCATCGTAAACAGTTCTACTAGA 60.148 37.037 0.00 0.00 0.00 2.43
95 96 7.863375 GCATCATCGTAAACAGTTCTACTAGAT 59.137 37.037 0.00 0.00 0.00 1.98
96 97 9.388346 CATCATCGTAAACAGTTCTACTAGATC 57.612 37.037 0.00 0.00 0.00 2.75
97 98 8.502105 TCATCGTAAACAGTTCTACTAGATCA 57.498 34.615 0.00 0.00 0.00 2.92
98 99 8.953313 TCATCGTAAACAGTTCTACTAGATCAA 58.047 33.333 0.00 0.00 0.00 2.57
99 100 9.011407 CATCGTAAACAGTTCTACTAGATCAAC 57.989 37.037 0.00 0.00 0.00 3.18
100 101 7.533426 TCGTAAACAGTTCTACTAGATCAACC 58.467 38.462 0.00 0.00 0.00 3.77
101 102 7.175467 TCGTAAACAGTTCTACTAGATCAACCA 59.825 37.037 0.00 0.00 0.00 3.67
102 103 7.974501 CGTAAACAGTTCTACTAGATCAACCAT 59.025 37.037 0.00 0.00 0.00 3.55
105 106 9.823647 AAACAGTTCTACTAGATCAACCATATG 57.176 33.333 0.00 0.00 0.00 1.78
106 107 7.437748 ACAGTTCTACTAGATCAACCATATGC 58.562 38.462 0.00 0.00 0.00 3.14
107 108 6.870965 CAGTTCTACTAGATCAACCATATGCC 59.129 42.308 0.00 0.00 0.00 4.40
108 109 6.014156 AGTTCTACTAGATCAACCATATGCCC 60.014 42.308 0.00 0.00 0.00 5.36
109 110 4.777896 TCTACTAGATCAACCATATGCCCC 59.222 45.833 0.00 0.00 0.00 5.80
110 111 2.303022 ACTAGATCAACCATATGCCCCG 59.697 50.000 0.00 0.00 0.00 5.73
111 112 0.250901 AGATCAACCATATGCCCCGC 60.251 55.000 0.00 0.00 0.00 6.13
112 113 0.537143 GATCAACCATATGCCCCGCA 60.537 55.000 0.00 0.00 44.86 5.69
123 124 4.805231 CCCCGCATCGCACACGTA 62.805 66.667 0.00 0.00 41.18 3.57
124 125 2.811747 CCCGCATCGCACACGTAA 60.812 61.111 0.00 0.00 41.18 3.18
125 126 2.394136 CCGCATCGCACACGTAAC 59.606 61.111 0.00 0.00 41.18 2.50
126 127 2.092291 CCGCATCGCACACGTAACT 61.092 57.895 0.00 0.00 41.18 2.24
127 128 0.799152 CCGCATCGCACACGTAACTA 60.799 55.000 0.00 0.00 41.18 2.24
128 129 0.986270 CGCATCGCACACGTAACTAA 59.014 50.000 0.00 0.00 41.18 2.24
129 130 1.387420 CGCATCGCACACGTAACTAAA 59.613 47.619 0.00 0.00 41.18 1.85
130 131 2.159947 CGCATCGCACACGTAACTAAAA 60.160 45.455 0.00 0.00 41.18 1.52
131 132 3.482923 CGCATCGCACACGTAACTAAAAT 60.483 43.478 0.00 0.00 41.18 1.82
132 133 4.019867 GCATCGCACACGTAACTAAAATC 58.980 43.478 0.00 0.00 41.18 2.17
133 134 4.201685 GCATCGCACACGTAACTAAAATCT 60.202 41.667 0.00 0.00 41.18 2.40
134 135 4.896562 TCGCACACGTAACTAAAATCTG 57.103 40.909 0.00 0.00 41.18 2.90
135 136 4.548494 TCGCACACGTAACTAAAATCTGA 58.452 39.130 0.00 0.00 41.18 3.27
136 137 4.983538 TCGCACACGTAACTAAAATCTGAA 59.016 37.500 0.00 0.00 41.18 3.02
137 138 5.636121 TCGCACACGTAACTAAAATCTGAAT 59.364 36.000 0.00 0.00 41.18 2.57
138 139 5.952064 CGCACACGTAACTAAAATCTGAATC 59.048 40.000 0.00 0.00 33.53 2.52
139 140 5.952064 GCACACGTAACTAAAATCTGAATCG 59.048 40.000 0.00 0.00 0.00 3.34
140 141 6.400727 GCACACGTAACTAAAATCTGAATCGT 60.401 38.462 0.00 0.00 0.00 3.73
141 142 6.948228 CACACGTAACTAAAATCTGAATCGTG 59.052 38.462 0.00 0.00 46.20 4.35
142 143 7.045725 CACGTAACTAAAATCTGAATCGTGT 57.954 36.000 0.00 0.00 39.56 4.49
143 144 7.507304 CACGTAACTAAAATCTGAATCGTGTT 58.493 34.615 0.00 0.00 39.56 3.32
144 145 8.007716 CACGTAACTAAAATCTGAATCGTGTTT 58.992 33.333 0.00 0.00 39.56 2.83
145 146 8.007716 ACGTAACTAAAATCTGAATCGTGTTTG 58.992 33.333 0.00 0.00 0.00 2.93
146 147 8.218441 CGTAACTAAAATCTGAATCGTGTTTGA 58.782 33.333 0.00 0.00 0.00 2.69
148 149 8.955061 AACTAAAATCTGAATCGTGTTTGATG 57.045 30.769 0.00 0.00 0.00 3.07
149 150 8.099364 ACTAAAATCTGAATCGTGTTTGATGT 57.901 30.769 0.00 0.00 0.00 3.06
150 151 8.230486 ACTAAAATCTGAATCGTGTTTGATGTC 58.770 33.333 0.00 0.00 0.00 3.06
151 152 6.808008 AAATCTGAATCGTGTTTGATGTCT 57.192 33.333 0.00 0.00 0.00 3.41
152 153 6.414408 AATCTGAATCGTGTTTGATGTCTC 57.586 37.500 0.00 0.00 0.00 3.36
153 154 4.245660 TCTGAATCGTGTTTGATGTCTCC 58.754 43.478 0.00 0.00 0.00 3.71
154 155 3.996363 CTGAATCGTGTTTGATGTCTCCA 59.004 43.478 0.00 0.00 0.00 3.86
155 156 3.745975 TGAATCGTGTTTGATGTCTCCAC 59.254 43.478 0.00 0.00 0.00 4.02
156 157 2.163818 TCGTGTTTGATGTCTCCACC 57.836 50.000 0.00 0.00 0.00 4.61
157 158 1.414550 TCGTGTTTGATGTCTCCACCA 59.585 47.619 0.00 0.00 0.00 4.17
158 159 2.038426 TCGTGTTTGATGTCTCCACCAT 59.962 45.455 0.00 0.00 0.00 3.55
159 160 2.416547 CGTGTTTGATGTCTCCACCATC 59.583 50.000 0.00 0.00 39.32 3.51
160 161 3.411446 GTGTTTGATGTCTCCACCATCA 58.589 45.455 0.00 0.00 45.14 3.07
161 162 3.189287 GTGTTTGATGTCTCCACCATCAC 59.811 47.826 2.75 0.00 46.13 3.06
162 163 3.181446 TGTTTGATGTCTCCACCATCACA 60.181 43.478 2.75 0.00 46.13 3.58
163 164 3.786368 TTGATGTCTCCACCATCACAA 57.214 42.857 2.75 0.00 46.13 3.33
164 165 3.786368 TGATGTCTCCACCATCACAAA 57.214 42.857 0.00 0.00 42.73 2.83
165 166 3.411446 TGATGTCTCCACCATCACAAAC 58.589 45.455 0.00 0.00 42.73 2.93
166 167 1.877637 TGTCTCCACCATCACAAACG 58.122 50.000 0.00 0.00 0.00 3.60
167 168 1.140052 TGTCTCCACCATCACAAACGT 59.860 47.619 0.00 0.00 0.00 3.99
168 169 2.218603 GTCTCCACCATCACAAACGTT 58.781 47.619 0.00 0.00 0.00 3.99
169 170 2.616842 GTCTCCACCATCACAAACGTTT 59.383 45.455 7.96 7.96 0.00 3.60
170 171 3.066203 GTCTCCACCATCACAAACGTTTT 59.934 43.478 11.66 0.20 0.00 2.43
171 172 3.066064 TCTCCACCATCACAAACGTTTTG 59.934 43.478 11.66 12.89 0.00 2.44
172 173 1.857837 CCACCATCACAAACGTTTTGC 59.142 47.619 11.66 0.00 0.00 3.68
173 174 2.534298 CACCATCACAAACGTTTTGCA 58.466 42.857 11.66 0.00 0.00 4.08
174 175 3.122297 CACCATCACAAACGTTTTGCAT 58.878 40.909 11.66 0.08 0.00 3.96
175 176 3.182173 CACCATCACAAACGTTTTGCATC 59.818 43.478 11.66 0.00 0.00 3.91
176 177 3.068024 ACCATCACAAACGTTTTGCATCT 59.932 39.130 11.66 0.00 0.00 2.90
177 178 4.050553 CCATCACAAACGTTTTGCATCTT 58.949 39.130 11.66 0.00 0.00 2.40
178 179 4.507388 CCATCACAAACGTTTTGCATCTTT 59.493 37.500 11.66 0.00 0.00 2.52
179 180 5.006552 CCATCACAAACGTTTTGCATCTTTT 59.993 36.000 11.66 0.00 0.00 2.27
180 181 6.456718 CCATCACAAACGTTTTGCATCTTTTT 60.457 34.615 11.66 0.00 0.00 1.94
200 201 5.900865 TTTTGACGGTTTATTACATCCCC 57.099 39.130 0.00 0.00 0.00 4.81
201 202 3.182341 TGACGGTTTATTACATCCCCG 57.818 47.619 0.00 0.00 41.09 5.73
203 204 3.183793 ACGGTTTATTACATCCCCGTC 57.816 47.619 0.00 0.00 44.71 4.79
204 205 2.767960 ACGGTTTATTACATCCCCGTCT 59.232 45.455 0.00 0.00 44.71 4.18
205 206 3.128349 CGGTTTATTACATCCCCGTCTG 58.872 50.000 0.00 0.00 0.00 3.51
206 207 2.876550 GGTTTATTACATCCCCGTCTGC 59.123 50.000 0.00 0.00 0.00 4.26
207 208 2.519377 TTATTACATCCCCGTCTGCG 57.481 50.000 0.00 0.00 37.95 5.18
208 209 1.694844 TATTACATCCCCGTCTGCGA 58.305 50.000 0.00 0.00 41.33 5.10
209 210 1.048601 ATTACATCCCCGTCTGCGAT 58.951 50.000 0.00 0.00 41.33 4.58
210 211 0.828022 TTACATCCCCGTCTGCGATT 59.172 50.000 0.00 0.00 41.33 3.34
211 212 1.694844 TACATCCCCGTCTGCGATTA 58.305 50.000 0.00 0.00 41.33 1.75
212 213 0.828022 ACATCCCCGTCTGCGATTAA 59.172 50.000 0.00 0.00 41.33 1.40
213 214 1.416401 ACATCCCCGTCTGCGATTAAT 59.584 47.619 0.00 0.00 41.33 1.40
214 215 1.800586 CATCCCCGTCTGCGATTAATG 59.199 52.381 0.00 0.00 41.33 1.90
215 216 0.531974 TCCCCGTCTGCGATTAATGC 60.532 55.000 0.00 0.00 41.33 3.56
216 217 0.813610 CCCCGTCTGCGATTAATGCA 60.814 55.000 10.71 10.71 41.33 3.96
217 218 1.229428 CCCGTCTGCGATTAATGCAT 58.771 50.000 11.35 0.00 42.32 3.96
218 219 1.195448 CCCGTCTGCGATTAATGCATC 59.805 52.381 0.00 8.18 42.32 3.91
225 226 2.735643 CGATTAATGCATCGCACACA 57.264 45.000 0.00 0.00 43.04 3.72
226 227 2.632228 CGATTAATGCATCGCACACAG 58.368 47.619 0.00 0.00 43.04 3.66
227 228 2.030823 CGATTAATGCATCGCACACAGT 59.969 45.455 0.00 0.00 43.04 3.55
228 229 3.485711 CGATTAATGCATCGCACACAGTT 60.486 43.478 0.00 0.00 43.04 3.16
229 230 3.913548 TTAATGCATCGCACACAGTTT 57.086 38.095 0.00 0.00 43.04 2.66
230 231 2.336554 AATGCATCGCACACAGTTTC 57.663 45.000 0.00 0.00 43.04 2.78
231 232 0.166597 ATGCATCGCACACAGTTTCG 59.833 50.000 0.00 0.00 43.04 3.46
232 233 1.157257 TGCATCGCACACAGTTTCGT 61.157 50.000 0.00 0.00 31.71 3.85
233 234 0.041312 GCATCGCACACAGTTTCGTT 60.041 50.000 0.00 0.00 0.00 3.85
234 235 1.193650 GCATCGCACACAGTTTCGTTA 59.806 47.619 0.00 0.00 0.00 3.18
235 236 2.349060 GCATCGCACACAGTTTCGTTAA 60.349 45.455 0.00 0.00 0.00 2.01
236 237 3.846744 GCATCGCACACAGTTTCGTTAAA 60.847 43.478 0.00 0.00 0.00 1.52
237 238 3.579147 TCGCACACAGTTTCGTTAAAG 57.421 42.857 0.00 0.00 0.00 1.85
238 239 2.285756 TCGCACACAGTTTCGTTAAAGG 59.714 45.455 0.00 0.00 0.00 3.11
239 240 2.601266 CGCACACAGTTTCGTTAAAGGG 60.601 50.000 0.00 0.00 0.00 3.95
240 241 2.356695 GCACACAGTTTCGTTAAAGGGT 59.643 45.455 0.00 0.00 0.00 4.34
241 242 3.547413 GCACACAGTTTCGTTAAAGGGTC 60.547 47.826 0.00 0.00 0.00 4.46
242 243 3.875134 CACACAGTTTCGTTAAAGGGTCT 59.125 43.478 0.00 0.00 0.00 3.85
243 244 4.025145 CACACAGTTTCGTTAAAGGGTCTC 60.025 45.833 0.00 0.00 0.00 3.36
244 245 4.141779 ACACAGTTTCGTTAAAGGGTCTCT 60.142 41.667 0.00 0.00 0.00 3.10
245 246 4.211374 CACAGTTTCGTTAAAGGGTCTCTG 59.789 45.833 0.00 0.00 0.00 3.35
246 247 4.100498 ACAGTTTCGTTAAAGGGTCTCTGA 59.900 41.667 0.00 0.00 0.00 3.27
247 248 5.221661 ACAGTTTCGTTAAAGGGTCTCTGAT 60.222 40.000 0.00 0.00 0.00 2.90
248 249 5.348997 CAGTTTCGTTAAAGGGTCTCTGATC 59.651 44.000 0.00 0.00 0.00 2.92
249 250 3.777465 TCGTTAAAGGGTCTCTGATCG 57.223 47.619 0.00 0.00 0.00 3.69
250 251 3.087031 TCGTTAAAGGGTCTCTGATCGT 58.913 45.455 0.00 0.00 0.00 3.73
251 252 4.264253 TCGTTAAAGGGTCTCTGATCGTA 58.736 43.478 0.00 0.00 0.00 3.43
252 253 4.334759 TCGTTAAAGGGTCTCTGATCGTAG 59.665 45.833 0.00 0.00 0.00 3.51
253 254 4.096081 CGTTAAAGGGTCTCTGATCGTAGT 59.904 45.833 0.00 0.00 0.00 2.73
254 255 5.341617 GTTAAAGGGTCTCTGATCGTAGTG 58.658 45.833 0.00 0.00 0.00 2.74
255 256 2.810870 AGGGTCTCTGATCGTAGTGT 57.189 50.000 0.00 0.00 0.00 3.55
256 257 2.645802 AGGGTCTCTGATCGTAGTGTC 58.354 52.381 0.00 0.00 0.00 3.67
257 258 1.331138 GGGTCTCTGATCGTAGTGTCG 59.669 57.143 0.00 0.00 0.00 4.35
258 259 1.268133 GGTCTCTGATCGTAGTGTCGC 60.268 57.143 0.00 0.00 0.00 5.19
259 260 0.651031 TCTCTGATCGTAGTGTCGCG 59.349 55.000 0.00 0.00 0.00 5.87
260 261 0.374063 CTCTGATCGTAGTGTCGCGT 59.626 55.000 5.77 0.00 0.00 6.01
261 262 0.800631 TCTGATCGTAGTGTCGCGTT 59.199 50.000 5.77 0.00 0.00 4.84
262 263 2.001872 TCTGATCGTAGTGTCGCGTTA 58.998 47.619 5.77 0.00 0.00 3.18
263 264 2.030091 TCTGATCGTAGTGTCGCGTTAG 59.970 50.000 5.77 0.00 0.00 2.34
264 265 1.733912 TGATCGTAGTGTCGCGTTAGT 59.266 47.619 5.77 1.71 0.00 2.24
265 266 2.929398 TGATCGTAGTGTCGCGTTAGTA 59.071 45.455 5.77 0.64 0.00 1.82
266 267 3.000623 TGATCGTAGTGTCGCGTTAGTAG 59.999 47.826 5.77 0.00 0.00 2.57
267 268 1.061131 TCGTAGTGTCGCGTTAGTAGC 59.939 52.381 5.77 0.00 0.00 3.58
268 269 1.201954 CGTAGTGTCGCGTTAGTAGCA 60.202 52.381 5.77 0.00 34.19 3.49
269 270 2.538333 CGTAGTGTCGCGTTAGTAGCAT 60.538 50.000 5.77 0.00 34.19 3.79
270 271 2.190325 AGTGTCGCGTTAGTAGCATC 57.810 50.000 5.77 0.00 34.19 3.91
271 272 1.197910 GTGTCGCGTTAGTAGCATCC 58.802 55.000 5.77 0.00 34.19 3.51
272 273 1.100510 TGTCGCGTTAGTAGCATCCT 58.899 50.000 5.77 0.00 34.19 3.24
273 274 1.202256 TGTCGCGTTAGTAGCATCCTG 60.202 52.381 5.77 0.00 34.19 3.86
274 275 0.248907 TCGCGTTAGTAGCATCCTGC 60.249 55.000 5.77 0.00 45.46 4.85
355 356 7.293073 AGCAATATGGACATTAGGAATGAAGT 58.707 34.615 6.21 0.00 41.46 3.01
434 440 8.517878 CAAGGACATTTCTGAAACTCATAACAT 58.482 33.333 4.73 0.00 0.00 2.71
797 811 1.956802 CCCTTTTGGTGAAGCCGTC 59.043 57.895 0.00 0.00 41.21 4.79
798 812 1.524008 CCCTTTTGGTGAAGCCGTCC 61.524 60.000 0.00 0.00 41.21 4.79
799 813 1.574428 CTTTTGGTGAAGCCGTCCG 59.426 57.895 0.00 0.00 41.21 4.79
800 814 1.153127 TTTTGGTGAAGCCGTCCGT 60.153 52.632 0.00 0.00 41.21 4.69
801 815 0.106335 TTTTGGTGAAGCCGTCCGTA 59.894 50.000 0.00 0.00 41.21 4.02
802 816 0.106335 TTTGGTGAAGCCGTCCGTAA 59.894 50.000 0.00 0.00 41.21 3.18
803 817 0.322322 TTGGTGAAGCCGTCCGTAAT 59.678 50.000 0.00 0.00 41.21 1.89
804 818 1.184431 TGGTGAAGCCGTCCGTAATA 58.816 50.000 0.00 0.00 41.21 0.98
805 819 1.135527 TGGTGAAGCCGTCCGTAATAG 59.864 52.381 0.00 0.00 41.21 1.73
806 820 1.135721 GGTGAAGCCGTCCGTAATAGT 59.864 52.381 0.00 0.00 0.00 2.12
827 841 0.846015 TAGTAGTAGGTAGGCGGGCA 59.154 55.000 3.78 0.00 0.00 5.36
828 842 0.187851 AGTAGTAGGTAGGCGGGCAT 59.812 55.000 3.78 0.00 0.00 4.40
829 843 0.317479 GTAGTAGGTAGGCGGGCATG 59.683 60.000 3.78 0.00 0.00 4.06
830 844 0.105862 TAGTAGGTAGGCGGGCATGT 60.106 55.000 3.78 0.00 0.00 3.21
850 1819 2.679716 GTGGAGCTGGAGCCCAAT 59.320 61.111 9.58 0.00 40.99 3.16
874 1843 3.026694 GGGCACTGGAAATTTCTAGCAT 58.973 45.455 26.26 9.63 39.14 3.79
875 1844 3.067320 GGGCACTGGAAATTTCTAGCATC 59.933 47.826 26.26 16.70 39.14 3.91
880 1858 2.607635 TGGAAATTTCTAGCATCGCGAC 59.392 45.455 12.93 0.00 0.00 5.19
1196 2184 0.037232 AAAAAGCTAGAGGACGCGCT 60.037 50.000 5.73 0.00 0.00 5.92
1208 2196 2.285154 ACGCGCTAATTGCTACGTC 58.715 52.632 5.73 0.00 44.68 4.34
1304 2292 8.216423 AGTAGGTAGGTAGATAGATTCGTCAAA 58.784 37.037 0.00 0.00 0.00 2.69
1323 2311 3.771577 AATAGGAATCTGGGGCTTACG 57.228 47.619 0.00 0.00 0.00 3.18
1903 2891 0.321034 TGGCTGTGACTGTGATCTGC 60.321 55.000 0.00 0.00 0.00 4.26
1935 2923 0.839946 TCTATTCAAGGAGCCCAGGC 59.160 55.000 0.00 0.00 42.33 4.85
2030 3018 1.211949 GTATGGTGCTGGGTGGTATGT 59.788 52.381 0.00 0.00 0.00 2.29
2194 3183 6.238925 GCCGGAAACATAAAATTAGGCACTAT 60.239 38.462 5.05 0.00 42.38 2.12
2379 3390 9.561069 CTCTGGTGTGCTTATTTTTATACCTAT 57.439 33.333 0.00 0.00 0.00 2.57
2380 3391 9.555727 TCTGGTGTGCTTATTTTTATACCTATC 57.444 33.333 0.00 0.00 0.00 2.08
2381 3392 9.561069 CTGGTGTGCTTATTTTTATACCTATCT 57.439 33.333 0.00 0.00 0.00 1.98
2906 3919 8.306761 CCATAAATTCTTTAGTTTGTGCTCCTT 58.693 33.333 0.00 0.00 0.00 3.36
3076 4089 9.632807 AGCATATATTTAGTCTTCGTCTTGATC 57.367 33.333 0.00 0.00 0.00 2.92
3169 4182 8.855110 TGTATTACATGGTTTGAACAATCTTGT 58.145 29.630 0.00 0.00 44.72 3.16
3363 4376 6.008331 AGGAGTTTTTAGCCGATTTTTAGGT 58.992 36.000 0.00 0.00 0.00 3.08
3470 4484 3.139397 AGTTCCTTGTTTGGATACCCACA 59.861 43.478 0.00 0.00 43.41 4.17
3548 4563 6.942005 ACACTTTCTCCAAATACACATCATGA 59.058 34.615 0.00 0.00 0.00 3.07
3601 4620 2.109181 GATTCTTCCCCCGCTCCG 59.891 66.667 0.00 0.00 0.00 4.63
4255 5301 7.944729 ATGTTCTACCTATGCACAAATTTCT 57.055 32.000 0.00 0.00 0.00 2.52
4335 5381 9.267084 CAAAAAGGCTAGGTTTTAAAGCATTTA 57.733 29.630 9.59 0.00 46.07 1.40
4406 5452 4.236935 TCACGGAAATTTACACGTAGGTC 58.763 43.478 12.70 0.00 37.85 3.85
4502 5552 1.814394 TCATGGTGAGTGCATTTGAGC 59.186 47.619 0.00 0.00 0.00 4.26
4524 5574 0.324943 GGGGCAGAGTAGCACTTTCA 59.675 55.000 0.00 0.00 38.23 2.69
4582 5632 5.181009 TGAACTTTCATAGGCACTCAGATG 58.819 41.667 0.00 0.00 33.65 2.90
4722 5826 7.699878 ACTAAGGTAGTTGATCCTCCAATTTT 58.300 34.615 0.00 0.00 34.86 1.82
4723 5827 8.832735 ACTAAGGTAGTTGATCCTCCAATTTTA 58.167 33.333 0.00 0.00 34.86 1.52
4724 5828 7.939784 AAGGTAGTTGATCCTCCAATTTTAC 57.060 36.000 0.00 0.00 33.09 2.01
4725 5829 6.113411 AGGTAGTTGATCCTCCAATTTTACG 58.887 40.000 0.00 0.00 0.00 3.18
4766 5874 6.881065 TGAGAGATTCGATCTTTTTCCATGTT 59.119 34.615 0.00 0.00 40.38 2.71
4767 5875 7.065085 TGAGAGATTCGATCTTTTTCCATGTTC 59.935 37.037 0.00 0.00 40.38 3.18
4768 5876 6.881065 AGAGATTCGATCTTTTTCCATGTTCA 59.119 34.615 0.00 0.00 40.38 3.18
4769 5877 7.555554 AGAGATTCGATCTTTTTCCATGTTCAT 59.444 33.333 0.00 0.00 40.38 2.57
4770 5878 8.737168 AGATTCGATCTTTTTCCATGTTCATA 57.263 30.769 0.00 0.00 35.76 2.15
4771 5879 9.347240 AGATTCGATCTTTTTCCATGTTCATAT 57.653 29.630 0.00 0.00 35.76 1.78
4772 5880 9.390795 GATTCGATCTTTTTCCATGTTCATATG 57.609 33.333 0.00 0.00 0.00 1.78
4773 5881 7.864108 TCGATCTTTTTCCATGTTCATATGT 57.136 32.000 1.90 0.00 0.00 2.29
4774 5882 7.696755 TCGATCTTTTTCCATGTTCATATGTG 58.303 34.615 1.90 0.00 0.00 3.21
4775 5883 7.336679 TCGATCTTTTTCCATGTTCATATGTGT 59.663 33.333 1.90 0.00 0.00 3.72
4776 5884 8.611757 CGATCTTTTTCCATGTTCATATGTGTA 58.388 33.333 1.90 0.00 0.00 2.90
4779 5887 9.295825 TCTTTTTCCATGTTCATATGTGTAAGT 57.704 29.630 1.90 0.00 0.00 2.24
4780 5888 9.912634 CTTTTTCCATGTTCATATGTGTAAGTT 57.087 29.630 1.90 0.00 0.00 2.66
4782 5890 9.689976 TTTTCCATGTTCATATGTGTAAGTTTG 57.310 29.630 1.90 0.00 0.00 2.93
4783 5891 7.994425 TCCATGTTCATATGTGTAAGTTTGT 57.006 32.000 1.90 0.00 0.00 2.83
4784 5892 8.039603 TCCATGTTCATATGTGTAAGTTTGTC 57.960 34.615 1.90 0.00 0.00 3.18
4785 5893 7.882791 TCCATGTTCATATGTGTAAGTTTGTCT 59.117 33.333 1.90 0.00 0.00 3.41
4786 5894 8.514594 CCATGTTCATATGTGTAAGTTTGTCTT 58.485 33.333 1.90 0.00 39.89 3.01
4801 5909 7.435068 AGTTTGTCTTACATATGGTCACAAC 57.565 36.000 7.80 1.69 0.00 3.32
4802 5910 6.995686 AGTTTGTCTTACATATGGTCACAACA 59.004 34.615 7.80 1.23 0.00 3.33
4803 5911 6.795098 TTGTCTTACATATGGTCACAACAC 57.205 37.500 7.80 0.00 0.00 3.32
4804 5912 6.109156 TGTCTTACATATGGTCACAACACT 57.891 37.500 7.80 0.00 0.00 3.55
4805 5913 6.530120 TGTCTTACATATGGTCACAACACTT 58.470 36.000 7.80 0.00 0.00 3.16
4806 5914 7.672240 TGTCTTACATATGGTCACAACACTTA 58.328 34.615 7.80 0.00 0.00 2.24
4807 5915 7.817478 TGTCTTACATATGGTCACAACACTTAG 59.183 37.037 7.80 0.00 0.00 2.18
4808 5916 8.033038 GTCTTACATATGGTCACAACACTTAGA 58.967 37.037 7.80 0.00 0.00 2.10
4809 5917 8.758829 TCTTACATATGGTCACAACACTTAGAT 58.241 33.333 7.80 0.00 0.00 1.98
4810 5918 9.383519 CTTACATATGGTCACAACACTTAGATT 57.616 33.333 7.80 0.00 0.00 2.40
4812 5920 8.948631 ACATATGGTCACAACACTTAGATTAG 57.051 34.615 7.80 0.00 0.00 1.73
4813 5921 8.540388 ACATATGGTCACAACACTTAGATTAGT 58.460 33.333 7.80 0.00 0.00 2.24
4814 5922 9.383519 CATATGGTCACAACACTTAGATTAGTT 57.616 33.333 0.00 0.00 0.00 2.24
4817 5925 9.959721 ATGGTCACAACACTTAGATTAGTTATT 57.040 29.630 0.00 0.00 0.00 1.40
4818 5926 9.214957 TGGTCACAACACTTAGATTAGTTATTG 57.785 33.333 0.00 0.00 0.00 1.90
4819 5927 9.216117 GGTCACAACACTTAGATTAGTTATTGT 57.784 33.333 0.00 0.00 0.00 2.71
4826 5934 9.046296 ACACTTAGATTAGTTATTGTATGCTGC 57.954 33.333 0.00 0.00 0.00 5.25
4827 5935 9.045223 CACTTAGATTAGTTATTGTATGCTGCA 57.955 33.333 4.13 4.13 0.00 4.41
4828 5936 9.784531 ACTTAGATTAGTTATTGTATGCTGCAT 57.215 29.630 20.18 20.18 0.00 3.96
4830 5938 7.356641 AGATTAGTTATTGTATGCTGCATCG 57.643 36.000 19.90 0.00 0.00 3.84
4831 5939 7.154656 AGATTAGTTATTGTATGCTGCATCGA 58.845 34.615 19.90 10.90 0.00 3.59
4832 5940 7.821359 AGATTAGTTATTGTATGCTGCATCGAT 59.179 33.333 19.90 16.57 0.00 3.59
4833 5941 5.852738 AGTTATTGTATGCTGCATCGATC 57.147 39.130 19.90 8.92 0.00 3.69
4834 5942 5.545588 AGTTATTGTATGCTGCATCGATCT 58.454 37.500 19.90 7.01 0.00 2.75
4835 5943 5.994054 AGTTATTGTATGCTGCATCGATCTT 59.006 36.000 19.90 3.44 0.00 2.40
4836 5944 6.484643 AGTTATTGTATGCTGCATCGATCTTT 59.515 34.615 19.90 0.00 0.00 2.52
4837 5945 5.762825 ATTGTATGCTGCATCGATCTTTT 57.237 34.783 19.90 0.00 0.00 2.27
4838 5946 5.565592 TTGTATGCTGCATCGATCTTTTT 57.434 34.783 19.90 0.00 0.00 1.94
4839 5947 5.160699 TGTATGCTGCATCGATCTTTTTC 57.839 39.130 19.90 0.00 0.00 2.29
4840 5948 3.705043 ATGCTGCATCGATCTTTTTCC 57.295 42.857 9.81 0.00 0.00 3.13
4841 5949 2.435422 TGCTGCATCGATCTTTTTCCA 58.565 42.857 0.00 0.00 0.00 3.53
4842 5950 3.018856 TGCTGCATCGATCTTTTTCCAT 58.981 40.909 0.00 0.00 0.00 3.41
4843 5951 3.181494 TGCTGCATCGATCTTTTTCCATG 60.181 43.478 0.00 0.00 0.00 3.66
4844 5952 3.181493 GCTGCATCGATCTTTTTCCATGT 60.181 43.478 0.00 0.00 0.00 3.21
4982 6090 3.118884 TGCTACTCCCTCCGTATCAAAAC 60.119 47.826 0.00 0.00 0.00 2.43
4990 6099 4.506654 CCCTCCGTATCAAAACATAAGACG 59.493 45.833 0.00 0.00 0.00 4.18
5070 6179 7.865706 ACTGTGATGACCCTGAATAAATTAC 57.134 36.000 0.00 0.00 0.00 1.89
5071 6180 7.402054 ACTGTGATGACCCTGAATAAATTACA 58.598 34.615 0.00 0.00 0.00 2.41
5717 6837 1.127951 AGCGTAAACAATGTACTGCGC 59.872 47.619 18.10 18.10 43.29 6.09
5760 6880 5.954434 CAACATGTCCTTTTGTTGTTCTG 57.046 39.130 0.00 0.00 44.79 3.02
5905 7032 1.238439 ACACGGCTGTCATTCTTTGG 58.762 50.000 0.00 0.00 0.00 3.28
5936 7063 0.736053 GGAAAGCCACAAACACGACA 59.264 50.000 0.00 0.00 0.00 4.35
5956 7083 3.668386 GCGGTAAAGCTGTTGCCT 58.332 55.556 11.70 0.00 40.80 4.75
5957 7084 1.956802 GCGGTAAAGCTGTTGCCTT 59.043 52.632 11.70 0.00 40.80 4.35
5958 7085 0.387239 GCGGTAAAGCTGTTGCCTTG 60.387 55.000 11.70 2.30 40.80 3.61
5960 7087 2.147958 CGGTAAAGCTGTTGCCTTGTA 58.852 47.619 11.70 0.00 40.80 2.41
5961 7088 2.550606 CGGTAAAGCTGTTGCCTTGTAA 59.449 45.455 11.70 0.00 40.80 2.41
5962 7089 3.608474 CGGTAAAGCTGTTGCCTTGTAAC 60.608 47.826 11.70 0.00 40.80 2.50
5963 7090 3.305131 GGTAAAGCTGTTGCCTTGTAACC 60.305 47.826 7.98 0.00 40.80 2.85
5964 7091 2.364972 AAGCTGTTGCCTTGTAACCT 57.635 45.000 0.00 0.00 40.80 3.50
6174 7925 7.262772 CAATCCAGTTTATTCATGATGCACTT 58.737 34.615 0.00 0.00 0.00 3.16
6332 8083 8.728088 AAAGTAAAAATTCATGTAGCTGTTCG 57.272 30.769 0.00 0.00 0.00 3.95
6547 8299 2.289444 CGACACTACCACCTCCAACATT 60.289 50.000 0.00 0.00 0.00 2.71
6743 8495 4.288366 TGATCTGTTCCTTGGTGGTTATCA 59.712 41.667 0.00 0.00 37.07 2.15
6866 8618 4.202419 TGTTAAGAAAGGCTTCCTGCAGTA 60.202 41.667 13.81 0.00 45.15 2.74
7084 8836 5.696724 GGACGCTATTATCAATGCTACACTT 59.303 40.000 0.00 0.00 0.00 3.16
7144 8896 4.044426 GGCTGTCAAACTTTCATGTTGAC 58.956 43.478 15.59 15.59 33.21 3.18
7273 9027 9.853555 TTATGCCATTAACAACATTTTACAGAG 57.146 29.630 0.00 0.00 0.00 3.35
7274 9028 7.517614 TGCCATTAACAACATTTTACAGAGA 57.482 32.000 0.00 0.00 0.00 3.10
7275 9029 7.367285 TGCCATTAACAACATTTTACAGAGAC 58.633 34.615 0.00 0.00 0.00 3.36
7276 9030 6.806739 GCCATTAACAACATTTTACAGAGACC 59.193 38.462 0.00 0.00 0.00 3.85
7278 9032 8.237267 CCATTAACAACATTTTACAGAGACCTC 58.763 37.037 0.00 0.00 0.00 3.85
7280 9034 3.746492 ACAACATTTTACAGAGACCTCGC 59.254 43.478 0.00 0.00 34.09 5.03
7281 9035 3.678056 ACATTTTACAGAGACCTCGCA 57.322 42.857 0.00 0.00 34.09 5.10
7282 9036 4.002906 ACATTTTACAGAGACCTCGCAA 57.997 40.909 0.00 0.00 34.09 4.85
7284 9038 4.819630 ACATTTTACAGAGACCTCGCAAAA 59.180 37.500 0.00 0.00 34.09 2.44
7360 11823 5.163509 GCATCTCTCACAGTACAAGGTCATA 60.164 44.000 0.00 0.00 0.00 2.15
7599 12290 8.593679 TGTGGTTCTGAGATTTGAAAGTATCTA 58.406 33.333 0.00 0.00 31.46 1.98
7660 12351 0.041238 AGAGAAGATGACACCGGGGA 59.959 55.000 12.96 0.00 0.00 4.81
7679 12370 0.110486 AAGACATGGCCGAAACCTGT 59.890 50.000 0.00 0.00 0.00 4.00
7695 12386 2.238144 ACCTGTAGCTGCTGACAATGAT 59.762 45.455 13.43 0.00 0.00 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.680110 GCAATATACGACATACAGTTCGCT 59.320 41.667 0.00 0.00 0.00 4.93
10 11 4.443063 TGCAATATACGACATACAGTTCGC 59.557 41.667 0.00 0.00 0.00 4.70
11 12 5.457473 TGTGCAATATACGACATACAGTTCG 59.543 40.000 0.00 0.00 0.00 3.95
12 13 6.254804 TGTGTGCAATATACGACATACAGTTC 59.745 38.462 0.00 0.00 31.66 3.01
13 14 6.035650 GTGTGTGCAATATACGACATACAGTT 59.964 38.462 0.00 0.00 35.27 3.16
14 15 5.518847 GTGTGTGCAATATACGACATACAGT 59.481 40.000 0.00 0.00 35.27 3.55
15 16 5.518487 TGTGTGTGCAATATACGACATACAG 59.482 40.000 0.00 0.00 36.07 2.74
16 17 5.411781 TGTGTGTGCAATATACGACATACA 58.588 37.500 0.00 0.00 37.88 2.29
17 18 5.959652 TGTGTGTGCAATATACGACATAC 57.040 39.130 0.00 0.00 32.73 2.39
18 19 6.758886 TCAATGTGTGTGCAATATACGACATA 59.241 34.615 0.00 0.00 29.34 2.29
19 20 5.584251 TCAATGTGTGTGCAATATACGACAT 59.416 36.000 0.00 0.00 0.00 3.06
20 21 4.932200 TCAATGTGTGTGCAATATACGACA 59.068 37.500 0.00 0.00 0.00 4.35
21 22 5.463499 TCAATGTGTGTGCAATATACGAC 57.537 39.130 0.00 0.00 0.00 4.34
22 23 6.074569 CGTATCAATGTGTGTGCAATATACGA 60.075 38.462 0.00 0.00 41.07 3.43
23 24 6.064525 CGTATCAATGTGTGTGCAATATACG 58.935 40.000 0.00 0.00 35.36 3.06
24 25 6.018262 ACCGTATCAATGTGTGTGCAATATAC 60.018 38.462 0.00 0.00 0.00 1.47
25 26 6.018343 CACCGTATCAATGTGTGTGCAATATA 60.018 38.462 0.00 0.00 0.00 0.86
26 27 4.881273 ACCGTATCAATGTGTGTGCAATAT 59.119 37.500 0.00 0.00 0.00 1.28
27 28 4.094146 CACCGTATCAATGTGTGTGCAATA 59.906 41.667 0.00 0.00 0.00 1.90
28 29 3.081061 ACCGTATCAATGTGTGTGCAAT 58.919 40.909 0.00 0.00 0.00 3.56
29 30 2.225255 CACCGTATCAATGTGTGTGCAA 59.775 45.455 0.00 0.00 0.00 4.08
30 31 1.803555 CACCGTATCAATGTGTGTGCA 59.196 47.619 0.00 0.00 0.00 4.57
31 32 1.130373 CCACCGTATCAATGTGTGTGC 59.870 52.381 0.00 0.00 0.00 4.57
32 33 2.415168 GACCACCGTATCAATGTGTGTG 59.585 50.000 0.00 0.00 0.00 3.82
33 34 2.614481 GGACCACCGTATCAATGTGTGT 60.614 50.000 0.00 0.00 0.00 3.72
34 35 2.006888 GGACCACCGTATCAATGTGTG 58.993 52.381 0.00 0.00 0.00 3.82
35 36 2.396590 GGACCACCGTATCAATGTGT 57.603 50.000 0.00 0.00 0.00 3.72
47 48 1.332686 GAACAACAGAAACGGACCACC 59.667 52.381 0.00 0.00 0.00 4.61
48 49 2.031683 CAGAACAACAGAAACGGACCAC 59.968 50.000 0.00 0.00 0.00 4.16
49 50 2.285083 CAGAACAACAGAAACGGACCA 58.715 47.619 0.00 0.00 0.00 4.02
50 51 1.002792 GCAGAACAACAGAAACGGACC 60.003 52.381 0.00 0.00 0.00 4.46
51 52 1.668751 TGCAGAACAACAGAAACGGAC 59.331 47.619 0.00 0.00 0.00 4.79
52 53 2.031258 TGCAGAACAACAGAAACGGA 57.969 45.000 0.00 0.00 0.00 4.69
53 54 2.290367 TGATGCAGAACAACAGAAACGG 59.710 45.455 0.00 0.00 0.00 4.44
54 55 3.607422 TGATGCAGAACAACAGAAACG 57.393 42.857 0.00 0.00 0.00 3.60
55 56 4.153986 CGATGATGCAGAACAACAGAAAC 58.846 43.478 0.00 0.00 34.17 2.78
56 57 3.814842 ACGATGATGCAGAACAACAGAAA 59.185 39.130 0.00 0.00 34.17 2.52
57 58 3.402110 ACGATGATGCAGAACAACAGAA 58.598 40.909 0.00 0.00 34.17 3.02
58 59 3.044235 ACGATGATGCAGAACAACAGA 57.956 42.857 0.00 0.00 34.17 3.41
59 60 4.926860 TTACGATGATGCAGAACAACAG 57.073 40.909 0.00 0.00 34.17 3.16
60 61 4.513318 TGTTTACGATGATGCAGAACAACA 59.487 37.500 0.00 0.00 35.29 3.33
61 62 5.029650 TGTTTACGATGATGCAGAACAAC 57.970 39.130 0.00 0.00 0.00 3.32
62 63 4.754618 ACTGTTTACGATGATGCAGAACAA 59.245 37.500 0.00 0.00 0.00 2.83
63 64 4.314961 ACTGTTTACGATGATGCAGAACA 58.685 39.130 0.00 0.00 0.00 3.18
64 65 4.928661 ACTGTTTACGATGATGCAGAAC 57.071 40.909 0.00 0.00 0.00 3.01
65 66 5.237815 AGAACTGTTTACGATGATGCAGAA 58.762 37.500 0.00 0.00 0.00 3.02
66 67 4.820897 AGAACTGTTTACGATGATGCAGA 58.179 39.130 0.00 0.00 0.00 4.26
67 68 5.807520 AGTAGAACTGTTTACGATGATGCAG 59.192 40.000 0.00 0.00 0.00 4.41
68 69 5.720202 AGTAGAACTGTTTACGATGATGCA 58.280 37.500 0.00 0.00 0.00 3.96
69 70 7.194278 TCTAGTAGAACTGTTTACGATGATGC 58.806 38.462 0.00 0.00 0.00 3.91
70 71 9.388346 GATCTAGTAGAACTGTTTACGATGATG 57.612 37.037 3.45 0.00 0.00 3.07
71 72 9.121658 TGATCTAGTAGAACTGTTTACGATGAT 57.878 33.333 3.45 6.36 0.00 2.45
72 73 8.502105 TGATCTAGTAGAACTGTTTACGATGA 57.498 34.615 3.45 2.64 0.00 2.92
73 74 9.011407 GTTGATCTAGTAGAACTGTTTACGATG 57.989 37.037 3.45 0.00 0.00 3.84
74 75 8.189460 GGTTGATCTAGTAGAACTGTTTACGAT 58.811 37.037 3.45 0.38 0.00 3.73
75 76 7.175467 TGGTTGATCTAGTAGAACTGTTTACGA 59.825 37.037 3.45 0.00 0.00 3.43
76 77 7.310664 TGGTTGATCTAGTAGAACTGTTTACG 58.689 38.462 3.45 0.00 0.00 3.18
79 80 9.823647 CATATGGTTGATCTAGTAGAACTGTTT 57.176 33.333 3.45 0.00 0.00 2.83
80 81 7.928706 GCATATGGTTGATCTAGTAGAACTGTT 59.071 37.037 3.45 0.00 0.00 3.16
81 82 7.437748 GCATATGGTTGATCTAGTAGAACTGT 58.562 38.462 3.45 0.00 0.00 3.55
82 83 6.870965 GGCATATGGTTGATCTAGTAGAACTG 59.129 42.308 3.45 0.00 0.00 3.16
83 84 6.014156 GGGCATATGGTTGATCTAGTAGAACT 60.014 42.308 3.45 0.00 0.00 3.01
84 85 6.166982 GGGCATATGGTTGATCTAGTAGAAC 58.833 44.000 3.45 1.88 0.00 3.01
85 86 5.248477 GGGGCATATGGTTGATCTAGTAGAA 59.752 44.000 3.45 0.00 0.00 2.10
86 87 4.777896 GGGGCATATGGTTGATCTAGTAGA 59.222 45.833 1.45 1.45 0.00 2.59
87 88 4.382040 CGGGGCATATGGTTGATCTAGTAG 60.382 50.000 4.56 0.00 0.00 2.57
88 89 3.513912 CGGGGCATATGGTTGATCTAGTA 59.486 47.826 4.56 0.00 0.00 1.82
89 90 2.303022 CGGGGCATATGGTTGATCTAGT 59.697 50.000 4.56 0.00 0.00 2.57
90 91 2.936993 GCGGGGCATATGGTTGATCTAG 60.937 54.545 4.56 0.00 0.00 2.43
91 92 1.003118 GCGGGGCATATGGTTGATCTA 59.997 52.381 4.56 0.00 0.00 1.98
92 93 0.250901 GCGGGGCATATGGTTGATCT 60.251 55.000 4.56 0.00 0.00 2.75
93 94 0.537143 TGCGGGGCATATGGTTGATC 60.537 55.000 4.56 0.00 31.71 2.92
94 95 1.536180 TGCGGGGCATATGGTTGAT 59.464 52.632 4.56 0.00 31.71 2.57
95 96 3.002371 TGCGGGGCATATGGTTGA 58.998 55.556 4.56 0.00 31.71 3.18
106 107 4.805231 TACGTGTGCGATGCGGGG 62.805 66.667 0.00 0.00 42.00 5.73
107 108 2.811747 TTACGTGTGCGATGCGGG 60.812 61.111 0.00 0.00 42.00 6.13
108 109 0.799152 TAGTTACGTGTGCGATGCGG 60.799 55.000 0.00 0.00 42.00 5.69
109 110 0.986270 TTAGTTACGTGTGCGATGCG 59.014 50.000 0.00 0.00 42.00 4.73
110 111 3.443054 TTTTAGTTACGTGTGCGATGC 57.557 42.857 0.00 0.00 42.00 3.91
111 112 5.061684 TCAGATTTTAGTTACGTGTGCGATG 59.938 40.000 0.00 0.00 42.00 3.84
112 113 5.165676 TCAGATTTTAGTTACGTGTGCGAT 58.834 37.500 0.00 0.00 42.00 4.58
113 114 4.548494 TCAGATTTTAGTTACGTGTGCGA 58.452 39.130 0.00 0.00 42.00 5.10
114 115 4.896562 TCAGATTTTAGTTACGTGTGCG 57.103 40.909 0.00 0.00 44.93 5.34
115 116 5.952064 CGATTCAGATTTTAGTTACGTGTGC 59.048 40.000 0.00 0.00 0.00 4.57
116 117 6.948228 CACGATTCAGATTTTAGTTACGTGTG 59.052 38.462 0.00 0.00 41.08 3.82
117 118 7.045725 CACGATTCAGATTTTAGTTACGTGT 57.954 36.000 0.00 0.00 41.08 4.49
119 120 7.647907 AACACGATTCAGATTTTAGTTACGT 57.352 32.000 0.00 0.00 0.00 3.57
120 121 8.218441 TCAAACACGATTCAGATTTTAGTTACG 58.782 33.333 0.00 0.00 0.00 3.18
123 124 8.567948 ACATCAAACACGATTCAGATTTTAGTT 58.432 29.630 0.00 0.00 0.00 2.24
124 125 8.099364 ACATCAAACACGATTCAGATTTTAGT 57.901 30.769 0.00 0.00 0.00 2.24
125 126 8.446273 AGACATCAAACACGATTCAGATTTTAG 58.554 33.333 0.00 0.00 0.00 1.85
126 127 8.322906 AGACATCAAACACGATTCAGATTTTA 57.677 30.769 0.00 0.00 0.00 1.52
127 128 7.206981 AGACATCAAACACGATTCAGATTTT 57.793 32.000 0.00 0.00 0.00 1.82
128 129 6.128172 GGAGACATCAAACACGATTCAGATTT 60.128 38.462 0.00 0.00 0.00 2.17
129 130 5.352569 GGAGACATCAAACACGATTCAGATT 59.647 40.000 0.00 0.00 0.00 2.40
130 131 4.872691 GGAGACATCAAACACGATTCAGAT 59.127 41.667 0.00 0.00 0.00 2.90
131 132 4.245660 GGAGACATCAAACACGATTCAGA 58.754 43.478 0.00 0.00 0.00 3.27
132 133 3.996363 TGGAGACATCAAACACGATTCAG 59.004 43.478 0.00 0.00 33.40 3.02
133 134 3.745975 GTGGAGACATCAAACACGATTCA 59.254 43.478 0.00 0.00 46.14 2.57
134 135 3.125316 GGTGGAGACATCAAACACGATTC 59.875 47.826 0.00 0.00 46.14 2.52
135 136 3.074412 GGTGGAGACATCAAACACGATT 58.926 45.455 0.00 0.00 46.14 3.34
136 137 2.699954 GGTGGAGACATCAAACACGAT 58.300 47.619 0.00 0.00 46.14 3.73
137 138 2.163818 GGTGGAGACATCAAACACGA 57.836 50.000 0.00 0.00 46.14 4.35
145 146 2.416547 CGTTTGTGATGGTGGAGACATC 59.583 50.000 0.00 0.00 46.14 3.06
146 147 2.224523 ACGTTTGTGATGGTGGAGACAT 60.225 45.455 0.00 0.00 46.14 3.06
147 148 1.140052 ACGTTTGTGATGGTGGAGACA 59.860 47.619 0.00 0.00 38.70 3.41
148 149 1.878953 ACGTTTGTGATGGTGGAGAC 58.121 50.000 0.00 0.00 0.00 3.36
149 150 2.631160 AACGTTTGTGATGGTGGAGA 57.369 45.000 0.00 0.00 0.00 3.71
150 151 3.371168 CAAAACGTTTGTGATGGTGGAG 58.629 45.455 15.46 0.00 0.00 3.86
151 152 2.480416 GCAAAACGTTTGTGATGGTGGA 60.480 45.455 15.46 0.00 0.00 4.02
152 153 1.857837 GCAAAACGTTTGTGATGGTGG 59.142 47.619 15.46 0.00 0.00 4.61
153 154 2.534298 TGCAAAACGTTTGTGATGGTG 58.466 42.857 15.46 8.23 0.00 4.17
154 155 2.949451 TGCAAAACGTTTGTGATGGT 57.051 40.000 15.46 0.00 0.00 3.55
155 156 3.641648 AGATGCAAAACGTTTGTGATGG 58.358 40.909 15.46 1.90 0.00 3.51
156 157 5.640218 AAAGATGCAAAACGTTTGTGATG 57.360 34.783 15.46 10.12 0.00 3.07
157 158 6.660887 AAAAAGATGCAAAACGTTTGTGAT 57.339 29.167 15.46 6.47 0.00 3.06
177 178 5.106237 CGGGGATGTAATAAACCGTCAAAAA 60.106 40.000 0.00 0.00 33.82 1.94
178 179 4.395542 CGGGGATGTAATAAACCGTCAAAA 59.604 41.667 0.00 0.00 33.82 2.44
179 180 3.940221 CGGGGATGTAATAAACCGTCAAA 59.060 43.478 0.00 0.00 33.82 2.69
180 181 3.055240 ACGGGGATGTAATAAACCGTCAA 60.055 43.478 0.00 0.00 43.59 3.18
181 182 2.500910 ACGGGGATGTAATAAACCGTCA 59.499 45.455 0.00 0.00 43.59 4.35
182 183 3.183793 ACGGGGATGTAATAAACCGTC 57.816 47.619 0.00 0.00 43.59 4.79
184 185 3.128349 CAGACGGGGATGTAATAAACCG 58.872 50.000 0.00 0.00 41.07 4.44
185 186 2.876550 GCAGACGGGGATGTAATAAACC 59.123 50.000 0.00 0.00 0.00 3.27
186 187 2.542595 CGCAGACGGGGATGTAATAAAC 59.457 50.000 0.00 0.00 34.97 2.01
187 188 2.431419 TCGCAGACGGGGATGTAATAAA 59.569 45.455 0.00 0.00 40.63 1.40
188 189 2.033372 TCGCAGACGGGGATGTAATAA 58.967 47.619 0.00 0.00 40.63 1.40
189 190 1.694844 TCGCAGACGGGGATGTAATA 58.305 50.000 0.00 0.00 40.63 0.98
190 191 1.048601 ATCGCAGACGGGGATGTAAT 58.951 50.000 4.38 0.00 46.38 1.89
191 192 2.511818 ATCGCAGACGGGGATGTAA 58.488 52.632 4.38 0.00 46.38 2.41
192 193 4.270482 ATCGCAGACGGGGATGTA 57.730 55.556 4.38 0.00 46.38 2.29
196 197 0.531974 GCATTAATCGCAGACGGGGA 60.532 55.000 0.00 0.00 42.51 4.81
197 198 0.813610 TGCATTAATCGCAGACGGGG 60.814 55.000 8.04 0.00 42.51 5.73
198 199 1.195448 GATGCATTAATCGCAGACGGG 59.805 52.381 0.00 0.00 43.88 5.28
199 200 1.136529 CGATGCATTAATCGCAGACGG 60.137 52.381 20.26 9.06 43.88 4.79
200 201 2.202649 CGATGCATTAATCGCAGACG 57.797 50.000 0.00 16.38 43.88 4.18
207 208 3.680642 ACTGTGTGCGATGCATTAATC 57.319 42.857 0.00 0.00 41.91 1.75
208 209 4.414852 GAAACTGTGTGCGATGCATTAAT 58.585 39.130 0.00 0.00 41.91 1.40
209 210 3.666638 CGAAACTGTGTGCGATGCATTAA 60.667 43.478 0.00 0.00 41.91 1.40
210 211 2.159720 CGAAACTGTGTGCGATGCATTA 60.160 45.455 0.00 0.00 41.91 1.90
211 212 1.400113 CGAAACTGTGTGCGATGCATT 60.400 47.619 0.00 0.00 41.91 3.56
212 213 0.166597 CGAAACTGTGTGCGATGCAT 59.833 50.000 0.00 0.00 41.91 3.96
213 214 1.157257 ACGAAACTGTGTGCGATGCA 61.157 50.000 0.00 0.00 35.60 3.96
214 215 0.041312 AACGAAACTGTGTGCGATGC 60.041 50.000 0.00 0.00 0.00 3.91
215 216 3.513462 TTAACGAAACTGTGTGCGATG 57.487 42.857 0.00 0.00 0.00 3.84
216 217 3.059188 CCTTTAACGAAACTGTGTGCGAT 60.059 43.478 0.00 0.00 0.00 4.58
217 218 2.285756 CCTTTAACGAAACTGTGTGCGA 59.714 45.455 0.00 0.00 0.00 5.10
218 219 2.601266 CCCTTTAACGAAACTGTGTGCG 60.601 50.000 0.00 0.00 0.00 5.34
219 220 2.356695 ACCCTTTAACGAAACTGTGTGC 59.643 45.455 0.00 0.00 0.00 4.57
220 221 3.875134 AGACCCTTTAACGAAACTGTGTG 59.125 43.478 0.00 0.00 0.00 3.82
221 222 4.124970 GAGACCCTTTAACGAAACTGTGT 58.875 43.478 0.00 0.00 0.00 3.72
222 223 4.211374 CAGAGACCCTTTAACGAAACTGTG 59.789 45.833 0.00 0.00 0.00 3.66
223 224 4.100498 TCAGAGACCCTTTAACGAAACTGT 59.900 41.667 0.00 0.00 0.00 3.55
224 225 4.628074 TCAGAGACCCTTTAACGAAACTG 58.372 43.478 0.00 0.00 0.00 3.16
225 226 4.950205 TCAGAGACCCTTTAACGAAACT 57.050 40.909 0.00 0.00 0.00 2.66
226 227 4.326548 CGATCAGAGACCCTTTAACGAAAC 59.673 45.833 0.00 0.00 0.00 2.78
227 228 4.021719 ACGATCAGAGACCCTTTAACGAAA 60.022 41.667 0.00 0.00 0.00 3.46
228 229 3.508793 ACGATCAGAGACCCTTTAACGAA 59.491 43.478 0.00 0.00 0.00 3.85
229 230 3.087031 ACGATCAGAGACCCTTTAACGA 58.913 45.455 0.00 0.00 0.00 3.85
230 231 3.505464 ACGATCAGAGACCCTTTAACG 57.495 47.619 0.00 0.00 0.00 3.18
231 232 5.105837 ACACTACGATCAGAGACCCTTTAAC 60.106 44.000 0.00 0.00 0.00 2.01
232 233 5.014858 ACACTACGATCAGAGACCCTTTAA 58.985 41.667 0.00 0.00 0.00 1.52
233 234 4.597004 ACACTACGATCAGAGACCCTTTA 58.403 43.478 0.00 0.00 0.00 1.85
234 235 3.432378 ACACTACGATCAGAGACCCTTT 58.568 45.455 0.00 0.00 0.00 3.11
235 236 3.018149 GACACTACGATCAGAGACCCTT 58.982 50.000 0.00 0.00 0.00 3.95
236 237 2.645802 GACACTACGATCAGAGACCCT 58.354 52.381 0.00 0.00 0.00 4.34
237 238 1.331138 CGACACTACGATCAGAGACCC 59.669 57.143 0.00 0.00 35.09 4.46
238 239 1.268133 GCGACACTACGATCAGAGACC 60.268 57.143 0.00 0.00 35.09 3.85
239 240 1.592590 CGCGACACTACGATCAGAGAC 60.593 57.143 0.00 0.00 35.09 3.36
240 241 0.651031 CGCGACACTACGATCAGAGA 59.349 55.000 0.00 0.00 35.09 3.10
241 242 0.374063 ACGCGACACTACGATCAGAG 59.626 55.000 15.93 0.00 35.09 3.35
242 243 0.800631 AACGCGACACTACGATCAGA 59.199 50.000 15.93 0.00 35.09 3.27
243 244 2.222976 ACTAACGCGACACTACGATCAG 60.223 50.000 15.93 0.00 35.09 2.90
244 245 1.733912 ACTAACGCGACACTACGATCA 59.266 47.619 15.93 0.00 35.09 2.92
245 246 2.448726 ACTAACGCGACACTACGATC 57.551 50.000 15.93 0.00 35.09 3.69
246 247 2.286067 GCTACTAACGCGACACTACGAT 60.286 50.000 15.93 0.00 35.09 3.73
247 248 1.061131 GCTACTAACGCGACACTACGA 59.939 52.381 15.93 0.00 35.09 3.43
248 249 1.201954 TGCTACTAACGCGACACTACG 60.202 52.381 15.93 0.00 0.00 3.51
249 250 2.532531 TGCTACTAACGCGACACTAC 57.467 50.000 15.93 0.00 0.00 2.73
250 251 2.032550 GGATGCTACTAACGCGACACTA 59.967 50.000 15.93 0.00 0.00 2.74
251 252 1.202268 GGATGCTACTAACGCGACACT 60.202 52.381 15.93 0.00 0.00 3.55
252 253 1.197910 GGATGCTACTAACGCGACAC 58.802 55.000 15.93 0.00 0.00 3.67
253 254 1.100510 AGGATGCTACTAACGCGACA 58.899 50.000 15.93 0.00 0.00 4.35
254 255 1.478137 CAGGATGCTACTAACGCGAC 58.522 55.000 15.93 0.00 0.00 5.19
255 256 3.938653 CAGGATGCTACTAACGCGA 57.061 52.632 15.93 0.00 0.00 5.87
267 268 5.604565 TGAATATGTCACTACTGCAGGATG 58.395 41.667 19.93 12.87 40.87 3.51
268 269 5.876651 TGAATATGTCACTACTGCAGGAT 57.123 39.130 19.93 0.00 0.00 3.24
269 270 5.664457 CTTGAATATGTCACTACTGCAGGA 58.336 41.667 19.93 9.06 35.39 3.86
270 271 4.272018 GCTTGAATATGTCACTACTGCAGG 59.728 45.833 19.93 3.21 35.39 4.85
271 272 5.114780 AGCTTGAATATGTCACTACTGCAG 58.885 41.667 13.48 13.48 35.39 4.41
272 273 5.089970 AGCTTGAATATGTCACTACTGCA 57.910 39.130 0.00 0.00 35.39 4.41
273 274 8.867935 CATATAGCTTGAATATGTCACTACTGC 58.132 37.037 0.00 0.00 35.39 4.40
274 275 8.867935 GCATATAGCTTGAATATGTCACTACTG 58.132 37.037 13.85 0.00 38.84 2.74
275 276 8.588472 TGCATATAGCTTGAATATGTCACTACT 58.412 33.333 13.85 0.00 45.94 2.57
276 277 8.763049 TGCATATAGCTTGAATATGTCACTAC 57.237 34.615 13.85 1.16 45.94 2.73
277 278 9.948964 ATTGCATATAGCTTGAATATGTCACTA 57.051 29.630 13.85 3.32 45.94 2.74
278 279 8.859236 ATTGCATATAGCTTGAATATGTCACT 57.141 30.769 13.85 6.62 45.94 3.41
279 280 9.903682 AAATTGCATATAGCTTGAATATGTCAC 57.096 29.630 13.85 2.23 45.94 3.67
404 410 5.296780 TGAGTTTCAGAAATGTCCTTGTGAC 59.703 40.000 0.00 0.00 44.72 3.67
434 440 9.646427 AAAAAGTGTACACTGCATTTTAGAAAA 57.354 25.926 28.55 0.00 41.58 2.29
797 811 6.370166 GCCTACCTACTACTACACTATTACGG 59.630 46.154 0.00 0.00 0.00 4.02
798 812 6.090088 CGCCTACCTACTACTACACTATTACG 59.910 46.154 0.00 0.00 0.00 3.18
799 813 6.370166 CCGCCTACCTACTACTACACTATTAC 59.630 46.154 0.00 0.00 0.00 1.89
800 814 6.467677 CCGCCTACCTACTACTACACTATTA 58.532 44.000 0.00 0.00 0.00 0.98
801 815 5.312079 CCGCCTACCTACTACTACACTATT 58.688 45.833 0.00 0.00 0.00 1.73
802 816 4.263243 CCCGCCTACCTACTACTACACTAT 60.263 50.000 0.00 0.00 0.00 2.12
803 817 3.071602 CCCGCCTACCTACTACTACACTA 59.928 52.174 0.00 0.00 0.00 2.74
804 818 2.158696 CCCGCCTACCTACTACTACACT 60.159 54.545 0.00 0.00 0.00 3.55
805 819 2.225467 CCCGCCTACCTACTACTACAC 58.775 57.143 0.00 0.00 0.00 2.90
806 820 1.477558 GCCCGCCTACCTACTACTACA 60.478 57.143 0.00 0.00 0.00 2.74
827 841 1.001641 GCTCCAGCTCCACCAACAT 60.002 57.895 0.00 0.00 38.21 2.71
828 842 2.431683 GCTCCAGCTCCACCAACA 59.568 61.111 0.00 0.00 38.21 3.33
829 843 2.360475 GGCTCCAGCTCCACCAAC 60.360 66.667 0.00 0.00 41.70 3.77
830 844 3.650950 GGGCTCCAGCTCCACCAA 61.651 66.667 0.00 0.00 41.70 3.67
850 1819 0.404040 AGAAATTTCCAGTGCCCGGA 59.596 50.000 14.61 0.00 0.00 5.14
874 1843 1.010419 GCTTCCTTAAACCGTCGCGA 61.010 55.000 3.71 3.71 0.00 5.87
875 1844 1.286354 TGCTTCCTTAAACCGTCGCG 61.286 55.000 0.00 0.00 0.00 5.87
880 1858 0.026285 CGCGATGCTTCCTTAAACCG 59.974 55.000 0.00 0.00 0.00 4.44
1196 2184 3.836762 TTGCCCGACGTAGCAATTA 57.163 47.368 15.98 0.00 43.74 1.40
1304 2292 1.978580 CCGTAAGCCCCAGATTCCTAT 59.021 52.381 0.00 0.00 0.00 2.57
1323 2311 5.669164 AGACCTTTCATCAGTTCTCTACC 57.331 43.478 0.00 0.00 0.00 3.18
1402 2390 5.321959 TGAACAACAAGATTCAAGCACAA 57.678 34.783 0.00 0.00 31.95 3.33
1599 2587 1.678360 CTCAAATCGCTGCACACAAC 58.322 50.000 0.00 0.00 0.00 3.32
1903 2891 5.591472 TCCTTGAATAGATTCACATGCTTGG 59.409 40.000 4.42 0.78 45.63 3.61
2030 3018 5.813157 CAGCAACATAATCATGCCAAATTGA 59.187 36.000 0.00 0.00 40.93 2.57
2379 3390 7.714813 TGACATGTGTGATTAGTTCAAAGAAGA 59.285 33.333 1.15 0.00 35.70 2.87
2380 3391 7.864686 TGACATGTGTGATTAGTTCAAAGAAG 58.135 34.615 1.15 0.00 35.70 2.85
2381 3392 7.800155 TGACATGTGTGATTAGTTCAAAGAA 57.200 32.000 1.15 0.00 35.70 2.52
2886 3899 8.870075 ATCTAAAGGAGCACAAACTAAAGAAT 57.130 30.769 0.00 0.00 0.00 2.40
3132 4145 3.876914 CCATGTAATACACGTCCAATGCT 59.123 43.478 0.00 0.00 0.00 3.79
3169 4182 5.715921 TGTCCATTCCTATCTCACTATGGA 58.284 41.667 0.00 0.00 39.24 3.41
3340 4353 6.263516 ACCTAAAAATCGGCTAAAAACTCC 57.736 37.500 0.00 0.00 0.00 3.85
3363 4376 7.273815 CGCAAAAACAGACTTAAAACAGGTTTA 59.726 33.333 0.00 0.00 31.63 2.01
3369 4383 8.912787 TTATTCGCAAAAACAGACTTAAAACA 57.087 26.923 0.00 0.00 0.00 2.83
3470 4484 4.288626 TGGGAATAGAAACAGCTACTGGTT 59.711 41.667 0.00 0.00 44.76 3.67
3531 4545 4.826556 TGACGTCATGATGTGTATTTGGA 58.173 39.130 25.03 0.00 0.00 3.53
3548 4563 2.579201 CCCGAGCTTGGATGACGT 59.421 61.111 22.68 0.00 0.00 4.34
3601 4620 3.941657 GAGGGAGCAGCGGTGTCAC 62.942 68.421 17.07 13.13 0.00 3.67
4335 5381 4.959839 TGGGAAAAACTAAAAAGGTGCTCT 59.040 37.500 0.00 0.00 0.00 4.09
4396 5442 4.836125 TCTTAGTTTTCGACCTACGTGT 57.164 40.909 0.00 0.00 43.13 4.49
4406 5452 5.115021 GGCGACAAACATTTCTTAGTTTTCG 59.885 40.000 2.05 2.05 39.00 3.46
4502 5552 0.326264 AAGTGCTACTCTGCCCCAAG 59.674 55.000 0.00 0.00 0.00 3.61
4524 5574 4.967036 GCTTAAGCTGTCCATTCCTATCT 58.033 43.478 20.38 0.00 38.21 1.98
4582 5632 8.242053 GCTTGTAGAAAGTAATTACCCCTTTTC 58.758 37.037 12.05 14.00 0.00 2.29
4722 5826 7.960262 TCTCTCAATCTAGGTATACTCACGTA 58.040 38.462 2.25 0.00 0.00 3.57
4723 5827 6.828788 TCTCTCAATCTAGGTATACTCACGT 58.171 40.000 2.25 0.00 0.00 4.49
4724 5828 7.915293 ATCTCTCAATCTAGGTATACTCACG 57.085 40.000 2.25 0.00 0.00 4.35
4725 5829 8.447833 CGAATCTCTCAATCTAGGTATACTCAC 58.552 40.741 2.25 0.00 0.00 3.51
4775 5883 8.995220 GTTGTGACCATATGTAAGACAAACTTA 58.005 33.333 1.24 0.00 39.72 2.24
4776 5884 7.500892 TGTTGTGACCATATGTAAGACAAACTT 59.499 33.333 1.24 0.00 42.04 2.66
4777 5885 6.995686 TGTTGTGACCATATGTAAGACAAACT 59.004 34.615 1.24 0.00 0.00 2.66
4778 5886 7.041372 AGTGTTGTGACCATATGTAAGACAAAC 60.041 37.037 1.24 6.64 0.00 2.93
4779 5887 6.995686 AGTGTTGTGACCATATGTAAGACAAA 59.004 34.615 1.24 0.00 0.00 2.83
4780 5888 6.530120 AGTGTTGTGACCATATGTAAGACAA 58.470 36.000 1.24 2.85 0.00 3.18
4781 5889 6.109156 AGTGTTGTGACCATATGTAAGACA 57.891 37.500 1.24 0.00 0.00 3.41
4782 5890 8.033038 TCTAAGTGTTGTGACCATATGTAAGAC 58.967 37.037 1.24 0.00 0.00 3.01
4783 5891 8.129496 TCTAAGTGTTGTGACCATATGTAAGA 57.871 34.615 1.24 0.00 0.00 2.10
4784 5892 8.948631 ATCTAAGTGTTGTGACCATATGTAAG 57.051 34.615 1.24 0.00 0.00 2.34
4787 5895 8.540388 ACTAATCTAAGTGTTGTGACCATATGT 58.460 33.333 1.24 0.00 0.00 2.29
4788 5896 8.948631 ACTAATCTAAGTGTTGTGACCATATG 57.051 34.615 0.00 0.00 0.00 1.78
4791 5899 9.959721 AATAACTAATCTAAGTGTTGTGACCAT 57.040 29.630 0.00 0.00 0.00 3.55
4792 5900 9.214957 CAATAACTAATCTAAGTGTTGTGACCA 57.785 33.333 0.00 0.00 0.00 4.02
4793 5901 9.216117 ACAATAACTAATCTAAGTGTTGTGACC 57.784 33.333 7.03 0.00 37.56 4.02
4800 5908 9.046296 GCAGCATACAATAACTAATCTAAGTGT 57.954 33.333 0.00 0.00 0.00 3.55
4801 5909 9.045223 TGCAGCATACAATAACTAATCTAAGTG 57.955 33.333 0.00 0.00 0.00 3.16
4802 5910 9.784531 ATGCAGCATACAATAACTAATCTAAGT 57.215 29.630 5.94 0.00 0.00 2.24
4804 5912 8.925700 CGATGCAGCATACAATAACTAATCTAA 58.074 33.333 8.22 0.00 0.00 2.10
4805 5913 8.303876 TCGATGCAGCATACAATAACTAATCTA 58.696 33.333 8.22 0.00 0.00 1.98
4806 5914 7.154656 TCGATGCAGCATACAATAACTAATCT 58.845 34.615 8.22 0.00 0.00 2.40
4807 5915 7.351414 TCGATGCAGCATACAATAACTAATC 57.649 36.000 8.22 0.00 0.00 1.75
4808 5916 7.821359 AGATCGATGCAGCATACAATAACTAAT 59.179 33.333 8.22 0.00 0.00 1.73
4809 5917 7.154656 AGATCGATGCAGCATACAATAACTAA 58.845 34.615 8.22 0.00 0.00 2.24
4810 5918 6.691508 AGATCGATGCAGCATACAATAACTA 58.308 36.000 8.22 0.00 0.00 2.24
4811 5919 5.545588 AGATCGATGCAGCATACAATAACT 58.454 37.500 8.22 0.00 0.00 2.24
4812 5920 5.852738 AGATCGATGCAGCATACAATAAC 57.147 39.130 8.22 0.00 0.00 1.89
4813 5921 6.866010 AAAGATCGATGCAGCATACAATAA 57.134 33.333 8.22 0.00 0.00 1.40
4814 5922 6.866010 AAAAGATCGATGCAGCATACAATA 57.134 33.333 8.22 0.00 0.00 1.90
4815 5923 5.762825 AAAAGATCGATGCAGCATACAAT 57.237 34.783 8.22 1.98 0.00 2.71
4816 5924 5.449041 GGAAAAAGATCGATGCAGCATACAA 60.449 40.000 8.22 0.00 0.00 2.41
4817 5925 4.035558 GGAAAAAGATCGATGCAGCATACA 59.964 41.667 8.22 0.00 0.00 2.29
4818 5926 4.035558 TGGAAAAAGATCGATGCAGCATAC 59.964 41.667 8.22 1.30 0.00 2.39
4819 5927 4.198530 TGGAAAAAGATCGATGCAGCATA 58.801 39.130 8.22 0.00 0.00 3.14
4820 5928 3.018856 TGGAAAAAGATCGATGCAGCAT 58.981 40.909 7.91 7.91 0.00 3.79
4821 5929 2.435422 TGGAAAAAGATCGATGCAGCA 58.565 42.857 0.54 0.00 0.00 4.41
4822 5930 3.181493 ACATGGAAAAAGATCGATGCAGC 60.181 43.478 0.54 0.00 38.62 5.25
4823 5931 4.627611 ACATGGAAAAAGATCGATGCAG 57.372 40.909 0.54 0.00 38.62 4.41
4824 5932 4.458642 TGAACATGGAAAAAGATCGATGCA 59.541 37.500 0.54 0.00 38.62 3.96
4825 5933 4.985413 TGAACATGGAAAAAGATCGATGC 58.015 39.130 0.54 0.00 38.62 3.91
4826 5934 8.347771 ACATATGAACATGGAAAAAGATCGATG 58.652 33.333 10.38 0.00 40.24 3.84
4827 5935 8.347771 CACATATGAACATGGAAAAAGATCGAT 58.652 33.333 10.38 0.00 0.00 3.59
4828 5936 7.679400 GCACATATGAACATGGAAAAAGATCGA 60.679 37.037 10.38 0.00 0.00 3.59
4829 5937 6.415867 GCACATATGAACATGGAAAAAGATCG 59.584 38.462 10.38 0.00 0.00 3.69
4830 5938 7.259882 TGCACATATGAACATGGAAAAAGATC 58.740 34.615 10.38 0.00 0.00 2.75
4831 5939 7.172868 TGCACATATGAACATGGAAAAAGAT 57.827 32.000 10.38 0.00 0.00 2.40
4832 5940 6.587206 TGCACATATGAACATGGAAAAAGA 57.413 33.333 10.38 0.00 0.00 2.52
4833 5941 6.869913 ACTTGCACATATGAACATGGAAAAAG 59.130 34.615 10.38 2.46 0.00 2.27
4834 5942 6.757237 ACTTGCACATATGAACATGGAAAAA 58.243 32.000 10.38 0.00 0.00 1.94
4835 5943 6.343716 ACTTGCACATATGAACATGGAAAA 57.656 33.333 10.38 0.00 0.00 2.29
4836 5944 5.981088 ACTTGCACATATGAACATGGAAA 57.019 34.783 10.38 0.00 0.00 3.13
4837 5945 5.981088 AACTTGCACATATGAACATGGAA 57.019 34.783 10.38 3.85 0.00 3.53
4838 5946 5.243507 ACAAACTTGCACATATGAACATGGA 59.756 36.000 10.38 0.00 0.00 3.41
4839 5947 5.472148 ACAAACTTGCACATATGAACATGG 58.528 37.500 10.38 5.87 0.00 3.66
4840 5948 6.384224 AGACAAACTTGCACATATGAACATG 58.616 36.000 10.38 11.01 0.00 3.21
4841 5949 6.579666 AGACAAACTTGCACATATGAACAT 57.420 33.333 10.38 0.00 0.00 2.71
4842 5950 6.389830 AAGACAAACTTGCACATATGAACA 57.610 33.333 10.38 3.98 37.45 3.18
4843 5951 7.806690 TCTAAGACAAACTTGCACATATGAAC 58.193 34.615 10.38 1.10 39.38 3.18
4844 5952 7.977789 TCTAAGACAAACTTGCACATATGAA 57.022 32.000 10.38 0.00 39.38 2.57
4961 6069 3.118884 TGTTTTGATACGGAGGGAGTAGC 60.119 47.826 0.00 0.00 0.00 3.58
5070 6179 7.172875 TGCCACCTTTAAATTCACATCAATTTG 59.827 33.333 2.15 0.00 36.75 2.32
5071 6180 7.222872 TGCCACCTTTAAATTCACATCAATTT 58.777 30.769 0.00 0.00 39.01 1.82
5674 6794 2.283145 AAAAGAGCAGTCAGGTGCAT 57.717 45.000 0.00 0.00 46.60 3.96
5717 6837 6.016360 TGTTGATTACCACTGAATCACAAAGG 60.016 38.462 0.00 0.00 41.76 3.11
5756 6876 6.746364 ACGCGTTTAAACATTTAACAACAGAA 59.254 30.769 18.07 0.00 32.77 3.02
5757 6877 6.194876 CACGCGTTTAAACATTTAACAACAGA 59.805 34.615 10.22 0.00 32.77 3.41
5759 6879 5.275788 GCACGCGTTTAAACATTTAACAACA 60.276 36.000 10.22 0.00 32.77 3.33
5760 6880 5.118307 GCACGCGTTTAAACATTTAACAAC 58.882 37.500 10.22 0.00 32.77 3.32
5905 7032 0.038801 GGCTTTCCTTTGTCTGCAGC 60.039 55.000 9.47 4.92 0.00 5.25
5916 7043 1.021968 GTCGTGTTTGTGGCTTTCCT 58.978 50.000 0.00 0.00 0.00 3.36
5954 7081 3.004734 CCAAACTCAAGCAGGTTACAAGG 59.995 47.826 0.00 0.00 27.37 3.61
5955 7082 3.882888 TCCAAACTCAAGCAGGTTACAAG 59.117 43.478 0.00 0.00 27.37 3.16
5956 7083 3.892284 TCCAAACTCAAGCAGGTTACAA 58.108 40.909 0.00 0.00 27.37 2.41
5957 7084 3.569194 TCCAAACTCAAGCAGGTTACA 57.431 42.857 0.00 0.00 27.37 2.41
5958 7085 4.578928 TCTTTCCAAACTCAAGCAGGTTAC 59.421 41.667 0.00 0.00 27.37 2.50
5960 7087 3.631250 TCTTTCCAAACTCAAGCAGGTT 58.369 40.909 0.00 0.00 28.80 3.50
5961 7088 3.217626 CTCTTTCCAAACTCAAGCAGGT 58.782 45.455 0.00 0.00 0.00 4.00
5962 7089 2.030451 GCTCTTTCCAAACTCAAGCAGG 60.030 50.000 0.00 0.00 0.00 4.85
5963 7090 2.030451 GGCTCTTTCCAAACTCAAGCAG 60.030 50.000 0.00 0.00 0.00 4.24
5964 7091 1.956477 GGCTCTTTCCAAACTCAAGCA 59.044 47.619 0.00 0.00 0.00 3.91
6514 8266 4.410400 GTGTCGGAGGCCTTGGGG 62.410 72.222 6.77 0.00 0.00 4.96
6743 8495 3.372206 CGGCTGTTCTTCGAATCTCATTT 59.628 43.478 0.00 0.00 0.00 2.32
7084 8836 5.178623 ACATCGAGCAAATCAAACGAGTAAA 59.821 36.000 0.00 0.00 36.49 2.01
7177 8929 5.440610 ACTCTGTCAACAAAGTGGATCTTT 58.559 37.500 0.00 0.00 45.96 2.52
7197 8949 7.803659 GTGGCTAATTACTTCTGACAAAAACTC 59.196 37.037 0.00 0.00 0.00 3.01
7251 9005 6.806739 GGTCTCTGTAAAATGTTGTTAATGGC 59.193 38.462 0.00 0.00 0.00 4.40
7289 9043 8.621286 CCTTTCACACTACTCTTTGTAAAATGT 58.379 33.333 0.00 0.00 0.00 2.71
7292 9046 8.044908 AGACCTTTCACACTACTCTTTGTAAAA 58.955 33.333 0.00 0.00 0.00 1.52
7294 9048 7.120923 AGACCTTTCACACTACTCTTTGTAA 57.879 36.000 0.00 0.00 0.00 2.41
7295 9049 6.322969 TGAGACCTTTCACACTACTCTTTGTA 59.677 38.462 0.00 0.00 0.00 2.41
7296 9050 5.128827 TGAGACCTTTCACACTACTCTTTGT 59.871 40.000 0.00 0.00 0.00 2.83
7297 9051 5.463724 GTGAGACCTTTCACACTACTCTTTG 59.536 44.000 1.54 0.00 45.32 2.77
7298 9052 5.602628 GTGAGACCTTTCACACTACTCTTT 58.397 41.667 1.54 0.00 45.32 2.52
7299 9053 5.203060 GTGAGACCTTTCACACTACTCTT 57.797 43.478 1.54 0.00 45.32 2.85
7378 12045 7.010339 ACTAAAAATAGGCTTGTGACTCTCT 57.990 36.000 0.00 0.00 31.35 3.10
7384 12051 8.020819 CGATCAAAACTAAAAATAGGCTTGTGA 58.979 33.333 0.00 0.00 0.00 3.58
7385 12052 7.201350 GCGATCAAAACTAAAAATAGGCTTGTG 60.201 37.037 0.00 0.00 0.00 3.33
7565 12241 6.440647 TCAAATCTCAGAACCACAGTACCTAT 59.559 38.462 0.00 0.00 0.00 2.57
7568 12244 4.894784 TCAAATCTCAGAACCACAGTACC 58.105 43.478 0.00 0.00 0.00 3.34
7599 12290 4.141620 CCTACTCTTGGCCACAATGATAGT 60.142 45.833 3.88 0.66 35.73 2.12
7660 12351 0.110486 ACAGGTTTCGGCCATGTCTT 59.890 50.000 2.24 0.00 0.00 3.01
7679 12370 4.577693 GGAAATGATCATTGTCAGCAGCTA 59.422 41.667 21.39 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.