Multiple sequence alignment - TraesCS6A01G193100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G193100 chr6A 100.000 6879 0 0 1 6879 266095835 266102713 0.000000e+00 12704.0
1 TraesCS6A01G193100 chr6D 95.279 2796 65 19 4114 6879 202462454 202459696 0.000000e+00 4370.0
2 TraesCS6A01G193100 chr6D 96.318 1684 40 10 968 2633 202471069 202469390 0.000000e+00 2747.0
3 TraesCS6A01G193100 chr6D 98.732 1104 10 1 3015 4114 202463610 202462507 0.000000e+00 1958.0
4 TraesCS6A01G193100 chr6D 83.629 788 106 12 6054 6830 243421689 243422464 0.000000e+00 719.0
5 TraesCS6A01G193100 chr6D 87.931 406 40 9 2547 2948 68685742 68685342 2.900000e-128 470.0
6 TraesCS6A01G193100 chr6D 80.989 263 40 9 598 852 201040972 201041232 4.210000e-47 200.0
7 TraesCS6A01G193100 chr6D 91.026 78 5 2 6054 6129 68849432 68849509 3.390000e-18 104.0
8 TraesCS6A01G193100 chr6B 95.650 2575 44 24 3050 5602 367662101 367659573 0.000000e+00 4072.0
9 TraesCS6A01G193100 chr6B 94.746 1713 70 12 566 2267 367663972 367662269 0.000000e+00 2647.0
10 TraesCS6A01G193100 chr6B 88.747 782 73 9 6054 6827 594676873 594676099 0.000000e+00 942.0
11 TraesCS6A01G193100 chr6B 95.592 431 13 2 5629 6054 367659574 367659145 0.000000e+00 686.0
12 TraesCS6A01G193100 chr6B 88.603 272 29 2 2267 2537 84679475 84679205 5.140000e-86 329.0
13 TraesCS6A01G193100 chr6B 97.638 127 3 0 2939 3065 367662271 367662145 1.160000e-52 219.0
14 TraesCS6A01G193100 chr6B 100.000 50 0 0 6830 6879 367659159 367659110 7.350000e-15 93.5
15 TraesCS6A01G193100 chrUn 99.248 399 3 0 1288 1686 478839669 478839271 0.000000e+00 721.0
16 TraesCS6A01G193100 chr1A 79.822 788 138 16 6054 6828 445475341 445474562 7.800000e-154 555.0
17 TraesCS6A01G193100 chr1A 87.591 411 42 9 2542 2947 19879188 19878782 1.040000e-127 468.0
18 TraesCS6A01G193100 chr1A 92.941 255 17 1 2265 2518 403378362 403378108 3.030000e-98 370.0
19 TraesCS6A01G193100 chr1A 84.071 113 11 5 6055 6161 431974835 431974724 1.220000e-17 102.0
20 TraesCS6A01G193100 chr7D 90.476 399 33 5 2547 2941 164484626 164485023 7.910000e-144 521.0
21 TraesCS6A01G193100 chr7D 88.561 271 29 2 2267 2537 238940520 238940252 1.850000e-85 327.0
22 TraesCS6A01G193100 chr7D 81.712 257 37 9 604 852 56256798 56256544 9.040000e-49 206.0
23 TraesCS6A01G193100 chr7D 90.411 73 6 1 6054 6125 381857296 381857224 2.040000e-15 95.3
24 TraesCS6A01G193100 chr2D 90.074 403 31 9 2540 2939 38261871 38262267 1.320000e-141 514.0
25 TraesCS6A01G193100 chr2D 89.250 400 34 9 2547 2942 90368271 90367877 6.200000e-135 492.0
26 TraesCS6A01G193100 chr2D 87.591 274 32 2 2265 2537 579000466 579000194 4.000000e-82 316.0
27 TraesCS6A01G193100 chr2D 81.853 259 33 13 604 852 291780629 291780883 9.040000e-49 206.0
28 TraesCS6A01G193100 chr3D 89.975 399 29 7 2547 2941 21373067 21372676 7.960000e-139 505.0
29 TraesCS6A01G193100 chr5D 89.474 399 33 7 2547 2941 6509074 6508681 4.790000e-136 496.0
30 TraesCS6A01G193100 chr5D 89.000 400 35 8 2547 2941 477840798 477841193 2.880000e-133 486.0
31 TraesCS6A01G193100 chr5D 88.889 396 37 5 2547 2939 102028519 102028128 1.340000e-131 481.0
32 TraesCS6A01G193100 chr5D 91.575 273 21 2 2267 2537 478873097 478872825 6.510000e-100 375.0
33 TraesCS6A01G193100 chr5D 81.818 253 38 7 596 842 116462044 116462294 9.040000e-49 206.0
34 TraesCS6A01G193100 chr7B 89.421 397 33 5 6054 6443 425101147 425100753 6.200000e-135 492.0
35 TraesCS6A01G193100 chr7B 86.000 450 43 15 114 560 100396328 100396760 1.350000e-126 464.0
36 TraesCS6A01G193100 chr7B 84.649 456 49 15 114 565 498258008 498258446 1.060000e-117 435.0
37 TraesCS6A01G193100 chr5A 86.534 453 45 13 116 567 644141464 644141901 1.040000e-132 484.0
38 TraesCS6A01G193100 chr5A 100.000 30 0 0 567 596 376465927 376465956 1.000000e-03 56.5
39 TraesCS6A01G193100 chr2A 86.313 453 45 14 116 566 653043662 653044099 1.740000e-130 477.0
40 TraesCS6A01G193100 chr2A 91.045 268 18 2 299 566 263460622 263460883 2.360000e-94 357.0
41 TraesCS6A01G193100 chr2A 88.321 274 29 3 2265 2537 490546000 490546271 6.650000e-85 326.0
42 TraesCS6A01G193100 chr2A 79.121 182 34 4 387 566 48691987 48692166 9.370000e-24 122.0
43 TraesCS6A01G193100 chr5B 85.249 461 47 13 114 570 512207951 512207508 8.130000e-124 455.0
44 TraesCS6A01G193100 chr5B 83.836 464 53 9 6158 6618 369596960 369596516 8.250000e-114 422.0
45 TraesCS6A01G193100 chr5B 89.744 78 6 2 6048 6125 227647333 227647408 1.580000e-16 99.0
46 TraesCS6A01G193100 chr5B 88.158 76 5 3 6050 6122 98504184 98504258 3.420000e-13 87.9
47 TraesCS6A01G193100 chr1B 84.902 457 48 13 114 566 349540654 349541093 6.330000e-120 442.0
48 TraesCS6A01G193100 chr1B 81.679 262 39 8 598 852 311440517 311440776 6.990000e-50 209.0
49 TraesCS6A01G193100 chr3B 86.241 407 45 6 6053 6452 90935610 90935208 1.370000e-116 431.0
50 TraesCS6A01G193100 chr3B 81.439 264 38 10 589 842 663159671 663159409 9.040000e-49 206.0
51 TraesCS6A01G193100 chr4B 82.506 423 59 12 6054 6465 44679684 44679266 2.360000e-94 357.0
52 TraesCS6A01G193100 chr4B 83.395 271 42 3 6196 6465 44501041 44500773 1.480000e-61 248.0
53 TraesCS6A01G193100 chr4B 83.544 158 15 7 6054 6201 44505375 44505219 3.350000e-28 137.0
54 TraesCS6A01G193100 chr4D 90.146 274 24 3 2265 2537 484656600 484656329 3.050000e-93 353.0
55 TraesCS6A01G193100 chr4D 96.364 55 2 0 6072 6126 349194155 349194209 2.640000e-14 91.6
56 TraesCS6A01G193100 chr7A 89.744 273 23 2 2265 2537 714238246 714238513 1.840000e-90 344.0
57 TraesCS6A01G193100 chr7A 100.000 33 0 0 564 596 533574411 533574443 2.070000e-05 62.1
58 TraesCS6A01G193100 chr7A 100.000 33 0 0 564 596 635697125 635697093 2.070000e-05 62.1
59 TraesCS6A01G193100 chr1D 81.509 265 40 7 596 852 220872874 220872611 6.990000e-50 209.0
60 TraesCS6A01G193100 chr4A 82.143 252 36 8 599 842 448488499 448488249 2.510000e-49 207.0
61 TraesCS6A01G193100 chr2B 81.061 264 40 6 597 852 371328848 371329109 1.170000e-47 202.0
62 TraesCS6A01G193100 chr3A 79.781 183 33 4 387 567 720684965 720684785 5.600000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G193100 chr6A 266095835 266102713 6878 False 12704.0 12704 100.0000 1 6879 1 chr6A.!!$F1 6878
1 TraesCS6A01G193100 chr6D 202459696 202463610 3914 True 3164.0 4370 97.0055 3015 6879 2 chr6D.!!$R3 3864
2 TraesCS6A01G193100 chr6D 202469390 202471069 1679 True 2747.0 2747 96.3180 968 2633 1 chr6D.!!$R2 1665
3 TraesCS6A01G193100 chr6D 243421689 243422464 775 False 719.0 719 83.6290 6054 6830 1 chr6D.!!$F3 776
4 TraesCS6A01G193100 chr6B 367659110 367663972 4862 True 1543.5 4072 96.7252 566 6879 5 chr6B.!!$R3 6313
5 TraesCS6A01G193100 chr6B 594676099 594676873 774 True 942.0 942 88.7470 6054 6827 1 chr6B.!!$R2 773
6 TraesCS6A01G193100 chr1A 445474562 445475341 779 True 555.0 555 79.8220 6054 6828 1 chr1A.!!$R4 774


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
343 344 0.027194 CCGATGCAATTCTCTGTGCG 59.973 55.000 0.00 0.00 43.93 5.34 F
550 551 0.253610 TGGTTCTCCACAAACACCGT 59.746 50.000 0.00 0.00 39.03 4.83 F
2315 2333 0.525455 GGCTTAAAAATCGGCGCCTG 60.525 55.000 26.68 18.23 34.80 4.85 F
2760 2799 0.037160 TAGGCGTGTTTTCCCCTTCC 59.963 55.000 0.00 0.00 0.00 3.46 F
2907 2946 1.977009 GAAAAAGGTCGCCCTGGGG 60.977 63.158 16.03 4.75 41.56 4.96 F
3512 3610 2.024414 AGAAACCACCACTTCTGTTGC 58.976 47.619 0.00 0.00 30.67 4.17 F
4810 4986 0.593128 ATTCAGGTGAAGCACAACGC 59.407 50.000 0.00 0.00 41.74 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2293 2304 0.248498 GCGCCGATTTTTAAGCCTCC 60.248 55.000 0.00 0.00 0.00 4.30 R
2437 2455 0.109919 GCCGATTTTTCGCCGAAAGT 60.110 50.000 12.50 5.86 32.93 2.66 R
3512 3610 1.126488 TTCCCTATCCTGCTCAGCTG 58.874 55.000 7.63 7.63 0.00 4.24 R
4280 4443 5.473504 ACCAGAAATTATTGACCACTGTGTC 59.526 40.000 7.08 5.39 35.77 3.67 R
4810 4986 3.136123 CCCCTGCGTTGCCTGATG 61.136 66.667 0.00 0.00 0.00 3.07 R
4996 5172 3.889196 TCAGTCGCCAACACAATAAAC 57.111 42.857 0.00 0.00 0.00 2.01 R
6732 6930 0.112995 AGGCTTGGAATGCTGTTGGA 59.887 50.000 0.00 0.00 37.15 3.53 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.046023 TCGACCAAGCCAGGCATG 60.046 61.111 15.80 12.67 0.00 4.06
27 28 3.091318 CCAGGCATGGTGAGCTAAG 57.909 57.895 9.85 0.00 42.17 2.18
28 29 0.254178 CCAGGCATGGTGAGCTAAGT 59.746 55.000 9.85 0.00 42.17 2.24
29 30 1.486310 CCAGGCATGGTGAGCTAAGTA 59.514 52.381 9.85 0.00 42.17 2.24
30 31 2.484417 CCAGGCATGGTGAGCTAAGTAG 60.484 54.545 9.85 0.00 42.17 2.57
31 32 2.169352 CAGGCATGGTGAGCTAAGTAGT 59.831 50.000 0.00 0.00 0.00 2.73
32 33 3.384789 CAGGCATGGTGAGCTAAGTAGTA 59.615 47.826 0.00 0.00 0.00 1.82
33 34 3.639094 AGGCATGGTGAGCTAAGTAGTAG 59.361 47.826 0.00 0.00 0.00 2.57
34 35 3.637229 GGCATGGTGAGCTAAGTAGTAGA 59.363 47.826 0.00 0.00 30.50 2.59
35 36 4.099573 GGCATGGTGAGCTAAGTAGTAGAA 59.900 45.833 0.00 0.00 30.50 2.10
36 37 5.285651 GCATGGTGAGCTAAGTAGTAGAAG 58.714 45.833 0.00 0.00 30.50 2.85
37 38 5.067936 GCATGGTGAGCTAAGTAGTAGAAGA 59.932 44.000 0.00 0.00 30.50 2.87
38 39 6.734137 CATGGTGAGCTAAGTAGTAGAAGAG 58.266 44.000 0.00 0.00 30.50 2.85
39 40 4.641094 TGGTGAGCTAAGTAGTAGAAGAGC 59.359 45.833 0.00 0.00 30.50 4.09
40 41 4.037089 GGTGAGCTAAGTAGTAGAAGAGCC 59.963 50.000 0.00 0.00 30.50 4.70
41 42 3.878103 TGAGCTAAGTAGTAGAAGAGCCG 59.122 47.826 0.00 0.00 30.50 5.52
42 43 3.215975 AGCTAAGTAGTAGAAGAGCCGG 58.784 50.000 0.00 0.00 30.50 6.13
43 44 2.950975 GCTAAGTAGTAGAAGAGCCGGT 59.049 50.000 1.90 0.00 30.50 5.28
44 45 3.003585 GCTAAGTAGTAGAAGAGCCGGTC 59.996 52.174 1.90 0.00 30.50 4.79
45 46 1.666054 AGTAGTAGAAGAGCCGGTCG 58.334 55.000 1.90 0.00 0.00 4.79
46 47 1.209019 AGTAGTAGAAGAGCCGGTCGA 59.791 52.381 1.90 0.00 0.00 4.20
47 48 1.598601 GTAGTAGAAGAGCCGGTCGAG 59.401 57.143 1.90 0.00 0.00 4.04
48 49 0.748729 AGTAGAAGAGCCGGTCGAGG 60.749 60.000 1.90 0.00 0.00 4.63
75 76 3.129502 CCATGGCAGCGTGGTCTG 61.130 66.667 0.00 0.00 37.15 3.51
76 77 2.359107 CATGGCAGCGTGGTCTGT 60.359 61.111 0.00 0.00 36.49 3.41
77 78 2.046892 ATGGCAGCGTGGTCTGTC 60.047 61.111 0.00 0.00 39.06 3.51
78 79 3.939837 ATGGCAGCGTGGTCTGTCG 62.940 63.158 0.00 0.00 41.36 4.35
88 89 4.034258 GTCTGTCGGCGACCACGA 62.034 66.667 34.28 24.43 42.66 4.35
96 97 4.688419 GCGACCACGACGAACCGA 62.688 66.667 0.00 0.00 42.66 4.69
97 98 2.798262 CGACCACGACGAACCGAC 60.798 66.667 0.00 0.00 42.66 4.79
98 99 2.332514 GACCACGACGAACCGACA 59.667 61.111 0.00 0.00 0.00 4.35
99 100 1.299316 GACCACGACGAACCGACAA 60.299 57.895 0.00 0.00 0.00 3.18
100 101 1.273455 GACCACGACGAACCGACAAG 61.273 60.000 0.00 0.00 0.00 3.16
102 103 1.008194 CACGACGAACCGACAAGGA 60.008 57.895 0.00 0.00 45.00 3.36
103 104 0.595567 CACGACGAACCGACAAGGAA 60.596 55.000 0.00 0.00 45.00 3.36
104 105 0.595825 ACGACGAACCGACAAGGAAC 60.596 55.000 0.00 0.00 45.00 3.62
105 106 0.318445 CGACGAACCGACAAGGAACT 60.318 55.000 0.00 0.00 45.00 3.01
106 107 1.137513 GACGAACCGACAAGGAACTG 58.862 55.000 0.00 0.00 45.00 3.16
107 108 0.878961 ACGAACCGACAAGGAACTGC 60.879 55.000 0.00 0.00 45.00 4.40
108 109 1.860078 GAACCGACAAGGAACTGCG 59.140 57.895 0.00 0.00 45.00 5.18
109 110 2.171489 GAACCGACAAGGAACTGCGC 62.171 60.000 0.00 0.00 45.00 6.09
110 111 2.664851 CCGACAAGGAACTGCGCA 60.665 61.111 10.98 10.98 45.00 6.09
111 112 2.551270 CGACAAGGAACTGCGCAC 59.449 61.111 5.66 0.00 40.86 5.34
112 113 2.243957 CGACAAGGAACTGCGCACA 61.244 57.895 5.66 0.00 40.86 4.57
113 114 1.568612 CGACAAGGAACTGCGCACAT 61.569 55.000 5.66 0.00 40.86 3.21
114 115 0.166814 GACAAGGAACTGCGCACATC 59.833 55.000 5.66 7.66 40.86 3.06
115 116 0.250467 ACAAGGAACTGCGCACATCT 60.250 50.000 5.66 0.00 40.86 2.90
116 117 0.445436 CAAGGAACTGCGCACATCTC 59.555 55.000 5.66 0.00 40.86 2.75
117 118 0.322975 AAGGAACTGCGCACATCTCT 59.677 50.000 5.66 4.56 40.86 3.10
118 119 0.322975 AGGAACTGCGCACATCTCTT 59.677 50.000 5.66 0.00 37.18 2.85
119 120 0.445436 GGAACTGCGCACATCTCTTG 59.555 55.000 5.66 0.00 0.00 3.02
120 121 0.179205 GAACTGCGCACATCTCTTGC 60.179 55.000 5.66 0.00 36.57 4.01
121 122 1.580845 AACTGCGCACATCTCTTGCC 61.581 55.000 5.66 0.00 36.57 4.52
122 123 2.032376 TGCGCACATCTCTTGCCA 59.968 55.556 5.66 0.00 36.57 4.92
123 124 1.374343 CTGCGCACATCTCTTGCCAT 61.374 55.000 5.66 0.00 36.57 4.40
124 125 0.961857 TGCGCACATCTCTTGCCATT 60.962 50.000 5.66 0.00 36.57 3.16
125 126 1.016627 GCGCACATCTCTTGCCATTA 58.983 50.000 0.30 0.00 36.57 1.90
126 127 1.605710 GCGCACATCTCTTGCCATTAT 59.394 47.619 0.30 0.00 36.57 1.28
127 128 2.603892 GCGCACATCTCTTGCCATTATG 60.604 50.000 0.30 0.00 36.57 1.90
128 129 2.603892 CGCACATCTCTTGCCATTATGC 60.604 50.000 0.00 0.00 36.57 3.14
129 130 2.288030 GCACATCTCTTGCCATTATGCC 60.288 50.000 0.00 0.00 33.58 4.40
130 131 2.031420 CACATCTCTTGCCATTATGCCG 60.031 50.000 0.00 0.00 0.00 5.69
131 132 1.538512 CATCTCTTGCCATTATGCCGG 59.461 52.381 0.00 0.00 0.00 6.13
132 133 0.836606 TCTCTTGCCATTATGCCGGA 59.163 50.000 5.05 0.00 0.00 5.14
133 134 1.202687 TCTCTTGCCATTATGCCGGAG 60.203 52.381 5.05 0.00 33.25 4.63
134 135 0.546122 TCTTGCCATTATGCCGGAGT 59.454 50.000 5.05 0.00 0.00 3.85
135 136 0.947244 CTTGCCATTATGCCGGAGTC 59.053 55.000 5.05 0.00 0.00 3.36
136 137 0.546122 TTGCCATTATGCCGGAGTCT 59.454 50.000 5.05 0.00 0.00 3.24
137 138 0.179048 TGCCATTATGCCGGAGTCTG 60.179 55.000 5.05 0.00 0.00 3.51
138 139 0.179045 GCCATTATGCCGGAGTCTGT 60.179 55.000 5.05 0.00 0.00 3.41
139 140 1.747206 GCCATTATGCCGGAGTCTGTT 60.747 52.381 5.05 0.00 0.00 3.16
140 141 1.942657 CCATTATGCCGGAGTCTGTTG 59.057 52.381 5.05 0.00 0.00 3.33
141 142 1.331756 CATTATGCCGGAGTCTGTTGC 59.668 52.381 5.05 0.00 0.00 4.17
142 143 0.739462 TTATGCCGGAGTCTGTTGCG 60.739 55.000 5.05 0.00 0.00 4.85
145 146 2.432628 CCGGAGTCTGTTGCGGTC 60.433 66.667 0.00 0.00 45.64 4.79
146 147 2.805353 CGGAGTCTGTTGCGGTCG 60.805 66.667 0.00 0.00 0.00 4.79
147 148 2.432628 GGAGTCTGTTGCGGTCGG 60.433 66.667 0.00 0.00 0.00 4.79
148 149 2.432628 GAGTCTGTTGCGGTCGGG 60.433 66.667 0.00 0.00 0.00 5.14
149 150 3.222354 GAGTCTGTTGCGGTCGGGT 62.222 63.158 0.00 0.00 0.00 5.28
150 151 1.870055 GAGTCTGTTGCGGTCGGGTA 61.870 60.000 0.00 0.00 0.00 3.69
151 152 1.735559 GTCTGTTGCGGTCGGGTAC 60.736 63.158 0.00 0.00 0.00 3.34
164 165 3.404773 GGTACCAGCCTTCAGCCT 58.595 61.111 7.15 0.00 45.47 4.58
165 166 1.222113 GGTACCAGCCTTCAGCCTC 59.778 63.158 7.15 0.00 45.47 4.70
166 167 1.153549 GTACCAGCCTTCAGCCTCG 60.154 63.158 0.00 0.00 45.47 4.63
167 168 3.019003 TACCAGCCTTCAGCCTCGC 62.019 63.158 0.00 0.00 45.47 5.03
168 169 4.399395 CCAGCCTTCAGCCTCGCA 62.399 66.667 0.00 0.00 45.47 5.10
169 170 2.124819 CAGCCTTCAGCCTCGCAT 60.125 61.111 0.00 0.00 45.47 4.73
170 171 2.178890 CAGCCTTCAGCCTCGCATC 61.179 63.158 0.00 0.00 45.47 3.91
171 172 2.124983 GCCTTCAGCCTCGCATCA 60.125 61.111 0.00 0.00 34.35 3.07
172 173 1.525535 GCCTTCAGCCTCGCATCAT 60.526 57.895 0.00 0.00 34.35 2.45
173 174 1.505477 GCCTTCAGCCTCGCATCATC 61.505 60.000 0.00 0.00 34.35 2.92
174 175 1.220169 CCTTCAGCCTCGCATCATCG 61.220 60.000 0.00 0.00 0.00 3.84
175 176 0.249197 CTTCAGCCTCGCATCATCGA 60.249 55.000 0.00 0.00 36.94 3.59
176 177 0.390492 TTCAGCCTCGCATCATCGAT 59.610 50.000 0.00 0.00 37.87 3.59
177 178 0.319297 TCAGCCTCGCATCATCGATG 60.319 55.000 19.61 19.61 42.37 3.84
184 185 4.756630 CATCATCGATGCCACGGA 57.243 55.556 20.81 2.38 33.17 4.69
185 186 2.525422 CATCATCGATGCCACGGAG 58.475 57.895 20.81 1.43 33.17 4.63
186 187 1.301244 ATCATCGATGCCACGGAGC 60.301 57.895 20.81 0.00 0.00 4.70
187 188 1.752358 ATCATCGATGCCACGGAGCT 61.752 55.000 20.81 0.00 0.00 4.09
188 189 1.953138 CATCGATGCCACGGAGCTC 60.953 63.158 13.37 4.71 0.00 4.09
189 190 2.426406 ATCGATGCCACGGAGCTCA 61.426 57.895 17.19 0.00 0.00 4.26
190 191 1.960040 ATCGATGCCACGGAGCTCAA 61.960 55.000 17.19 0.00 0.00 3.02
191 192 2.456119 CGATGCCACGGAGCTCAAC 61.456 63.158 17.19 0.00 0.00 3.18
192 193 2.434884 ATGCCACGGAGCTCAACG 60.435 61.111 17.19 13.38 0.00 4.10
193 194 3.240134 ATGCCACGGAGCTCAACGT 62.240 57.895 17.19 14.08 45.25 3.99
194 195 3.112709 GCCACGGAGCTCAACGTC 61.113 66.667 17.19 2.46 42.04 4.34
195 196 2.805353 CCACGGAGCTCAACGTCG 60.805 66.667 17.19 11.83 42.04 5.12
196 197 2.050351 CACGGAGCTCAACGTCGT 60.050 61.111 17.19 12.53 42.04 4.34
197 198 2.081212 CACGGAGCTCAACGTCGTC 61.081 63.158 17.19 0.00 42.04 4.20
198 199 2.870161 CGGAGCTCAACGTCGTCG 60.870 66.667 17.19 3.03 43.34 5.12
199 200 2.504244 GGAGCTCAACGTCGTCGG 60.504 66.667 17.19 0.00 41.85 4.79
200 201 3.173240 GAGCTCAACGTCGTCGGC 61.173 66.667 9.40 3.71 41.85 5.54
265 266 2.418356 CGCGGGGGCGTAGAATTA 59.582 61.111 0.00 0.00 0.00 1.40
266 267 1.663702 CGCGGGGGCGTAGAATTAG 60.664 63.158 0.00 0.00 0.00 1.73
267 268 1.744014 GCGGGGGCGTAGAATTAGA 59.256 57.895 0.00 0.00 0.00 2.10
268 269 0.320697 GCGGGGGCGTAGAATTAGAT 59.679 55.000 0.00 0.00 0.00 1.98
269 270 1.939838 GCGGGGGCGTAGAATTAGATG 60.940 57.143 0.00 0.00 0.00 2.90
270 271 1.337823 CGGGGGCGTAGAATTAGATGG 60.338 57.143 0.00 0.00 0.00 3.51
271 272 1.610886 GGGGGCGTAGAATTAGATGGC 60.611 57.143 0.00 0.00 0.00 4.40
272 273 1.071699 GGGGCGTAGAATTAGATGGCA 59.928 52.381 0.00 0.00 0.00 4.92
273 274 2.486548 GGGGCGTAGAATTAGATGGCAA 60.487 50.000 0.00 0.00 0.00 4.52
274 275 3.211045 GGGCGTAGAATTAGATGGCAAA 58.789 45.455 0.00 0.00 0.00 3.68
275 276 3.003378 GGGCGTAGAATTAGATGGCAAAC 59.997 47.826 0.00 0.00 0.00 2.93
276 277 3.303132 GGCGTAGAATTAGATGGCAAACG 60.303 47.826 0.00 0.00 0.00 3.60
277 278 3.844943 GCGTAGAATTAGATGGCAAACGC 60.845 47.826 0.00 0.00 44.94 4.84
278 279 3.308595 CGTAGAATTAGATGGCAAACGCA 59.691 43.478 0.00 0.00 0.00 5.24
279 280 4.201773 CGTAGAATTAGATGGCAAACGCAA 60.202 41.667 0.00 0.00 0.00 4.85
280 281 4.096732 AGAATTAGATGGCAAACGCAAC 57.903 40.909 0.00 0.00 0.00 4.17
281 282 3.505680 AGAATTAGATGGCAAACGCAACA 59.494 39.130 0.00 0.00 0.00 3.33
282 283 2.987413 TTAGATGGCAAACGCAACAG 57.013 45.000 0.00 0.00 0.00 3.16
283 284 1.890876 TAGATGGCAAACGCAACAGT 58.109 45.000 0.00 0.00 0.00 3.55
284 285 0.311790 AGATGGCAAACGCAACAGTG 59.688 50.000 0.00 0.00 0.00 3.66
285 286 0.664166 GATGGCAAACGCAACAGTGG 60.664 55.000 0.00 0.00 0.00 4.00
286 287 1.106351 ATGGCAAACGCAACAGTGGA 61.106 50.000 0.00 0.00 0.00 4.02
287 288 1.008538 GGCAAACGCAACAGTGGAG 60.009 57.895 0.00 0.00 0.00 3.86
288 289 1.444119 GGCAAACGCAACAGTGGAGA 61.444 55.000 0.00 0.00 0.00 3.71
289 290 0.593128 GCAAACGCAACAGTGGAGAT 59.407 50.000 0.00 0.00 0.00 2.75
290 291 1.664016 GCAAACGCAACAGTGGAGATG 60.664 52.381 0.00 0.00 0.00 2.90
291 292 1.872952 CAAACGCAACAGTGGAGATGA 59.127 47.619 0.00 0.00 0.00 2.92
292 293 1.512926 AACGCAACAGTGGAGATGAC 58.487 50.000 0.00 0.00 0.00 3.06
293 294 0.667487 ACGCAACAGTGGAGATGACG 60.667 55.000 0.00 0.10 0.00 4.35
294 295 0.388520 CGCAACAGTGGAGATGACGA 60.389 55.000 0.00 0.00 0.00 4.20
295 296 1.795768 GCAACAGTGGAGATGACGAA 58.204 50.000 0.00 0.00 0.00 3.85
296 297 1.728971 GCAACAGTGGAGATGACGAAG 59.271 52.381 0.00 0.00 0.00 3.79
297 298 2.610479 GCAACAGTGGAGATGACGAAGA 60.610 50.000 0.00 0.00 0.00 2.87
298 299 2.989840 CAACAGTGGAGATGACGAAGAC 59.010 50.000 0.00 0.00 0.00 3.01
299 300 1.200252 ACAGTGGAGATGACGAAGACG 59.800 52.381 0.00 0.00 45.75 4.18
300 301 1.468914 CAGTGGAGATGACGAAGACGA 59.531 52.381 0.00 0.00 42.66 4.20
301 302 2.098280 CAGTGGAGATGACGAAGACGAT 59.902 50.000 0.00 0.00 42.66 3.73
302 303 2.098280 AGTGGAGATGACGAAGACGATG 59.902 50.000 0.00 0.00 42.66 3.84
303 304 1.202302 TGGAGATGACGAAGACGATGC 60.202 52.381 0.00 0.00 42.66 3.91
304 305 1.202302 GGAGATGACGAAGACGATGCA 60.202 52.381 0.00 0.00 42.66 3.96
305 306 2.530177 GAGATGACGAAGACGATGCAA 58.470 47.619 0.00 0.00 42.66 4.08
306 307 2.923655 GAGATGACGAAGACGATGCAAA 59.076 45.455 0.00 0.00 42.66 3.68
307 308 2.668457 AGATGACGAAGACGATGCAAAC 59.332 45.455 0.00 0.00 42.66 2.93
308 309 0.781787 TGACGAAGACGATGCAAACG 59.218 50.000 13.58 13.58 42.66 3.60
309 310 0.516524 GACGAAGACGATGCAAACGC 60.517 55.000 14.77 8.95 42.66 4.84
310 311 0.944311 ACGAAGACGATGCAAACGCT 60.944 50.000 14.77 10.67 42.66 5.07
311 312 0.989164 CGAAGACGATGCAAACGCTA 59.011 50.000 14.77 0.00 42.66 4.26
312 313 1.388768 CGAAGACGATGCAAACGCTAA 59.611 47.619 14.77 0.00 42.66 3.09
313 314 2.159894 CGAAGACGATGCAAACGCTAAA 60.160 45.455 14.77 0.00 42.66 1.85
314 315 3.408150 GAAGACGATGCAAACGCTAAAG 58.592 45.455 14.77 0.00 34.47 1.85
315 316 2.413837 AGACGATGCAAACGCTAAAGT 58.586 42.857 14.77 0.00 34.47 2.66
316 317 2.806244 AGACGATGCAAACGCTAAAGTT 59.194 40.909 14.77 0.00 34.47 2.66
317 318 3.120649 AGACGATGCAAACGCTAAAGTTC 60.121 43.478 14.77 5.25 34.47 3.01
318 319 2.546368 ACGATGCAAACGCTAAAGTTCA 59.454 40.909 14.77 0.00 34.47 3.18
319 320 3.002862 ACGATGCAAACGCTAAAGTTCAA 59.997 39.130 14.77 0.00 34.47 2.69
320 321 4.158384 CGATGCAAACGCTAAAGTTCAAT 58.842 39.130 0.00 0.00 32.43 2.57
321 322 5.106869 ACGATGCAAACGCTAAAGTTCAATA 60.107 36.000 14.77 0.00 34.47 1.90
322 323 5.792962 CGATGCAAACGCTAAAGTTCAATAA 59.207 36.000 0.00 0.00 32.43 1.40
323 324 6.022251 CGATGCAAACGCTAAAGTTCAATAAG 60.022 38.462 0.00 0.00 32.43 1.73
324 325 4.915085 TGCAAACGCTAAAGTTCAATAAGC 59.085 37.500 0.00 0.00 32.43 3.09
325 326 4.323602 GCAAACGCTAAAGTTCAATAAGCC 59.676 41.667 0.00 0.00 32.43 4.35
326 327 4.336532 AACGCTAAAGTTCAATAAGCCG 57.663 40.909 0.00 0.00 0.00 5.52
327 328 3.592059 ACGCTAAAGTTCAATAAGCCGA 58.408 40.909 0.00 0.00 0.00 5.54
328 329 4.189231 ACGCTAAAGTTCAATAAGCCGAT 58.811 39.130 0.00 0.00 0.00 4.18
329 330 4.034048 ACGCTAAAGTTCAATAAGCCGATG 59.966 41.667 0.00 0.00 0.00 3.84
330 331 4.282873 GCTAAAGTTCAATAAGCCGATGC 58.717 43.478 0.00 0.00 37.95 3.91
331 332 4.201910 GCTAAAGTTCAATAAGCCGATGCA 60.202 41.667 0.00 0.00 41.13 3.96
332 333 4.782019 AAAGTTCAATAAGCCGATGCAA 57.218 36.364 0.00 0.00 41.13 4.08
333 334 4.989279 AAGTTCAATAAGCCGATGCAAT 57.011 36.364 0.00 0.00 41.13 3.56
334 335 4.989279 AGTTCAATAAGCCGATGCAATT 57.011 36.364 0.00 0.00 41.13 2.32
335 336 4.925068 AGTTCAATAAGCCGATGCAATTC 58.075 39.130 0.00 0.00 41.13 2.17
336 337 4.641989 AGTTCAATAAGCCGATGCAATTCT 59.358 37.500 0.00 0.00 41.13 2.40
337 338 4.818534 TCAATAAGCCGATGCAATTCTC 57.181 40.909 0.00 0.00 41.13 2.87
338 339 4.454678 TCAATAAGCCGATGCAATTCTCT 58.545 39.130 0.00 0.00 41.13 3.10
339 340 4.274214 TCAATAAGCCGATGCAATTCTCTG 59.726 41.667 0.00 0.00 41.13 3.35
340 341 2.119801 AAGCCGATGCAATTCTCTGT 57.880 45.000 0.00 0.00 41.13 3.41
341 342 1.376543 AGCCGATGCAATTCTCTGTG 58.623 50.000 0.00 0.00 41.13 3.66
342 343 0.248377 GCCGATGCAATTCTCTGTGC 60.248 55.000 0.00 0.00 41.29 4.57
343 344 0.027194 CCGATGCAATTCTCTGTGCG 59.973 55.000 0.00 0.00 43.93 5.34
344 345 1.001624 CGATGCAATTCTCTGTGCGA 58.998 50.000 0.00 0.00 43.93 5.10
345 346 1.005242 CGATGCAATTCTCTGTGCGAG 60.005 52.381 0.00 0.00 43.93 5.03
346 347 1.329906 GATGCAATTCTCTGTGCGAGG 59.670 52.381 0.00 0.00 43.93 4.63
347 348 1.300971 TGCAATTCTCTGTGCGAGGC 61.301 55.000 0.00 0.00 43.93 4.70
348 349 1.300971 GCAATTCTCTGTGCGAGGCA 61.301 55.000 0.00 0.00 40.30 4.75
364 365 3.411351 CACCGGACGGCGTGAAAG 61.411 66.667 21.19 5.77 39.32 2.62
378 379 5.728351 GCGTGAAAGCCATAGTATACAAA 57.272 39.130 5.50 0.00 0.00 2.83
379 380 6.114221 GCGTGAAAGCCATAGTATACAAAA 57.886 37.500 5.50 0.00 0.00 2.44
380 381 6.548171 GCGTGAAAGCCATAGTATACAAAAA 58.452 36.000 5.50 0.00 0.00 1.94
453 454 8.785329 TTTTTGAGTTTTTAGCAAACCAGATT 57.215 26.923 0.00 0.00 31.89 2.40
454 455 9.877178 TTTTTGAGTTTTTAGCAAACCAGATTA 57.123 25.926 0.00 0.00 31.89 1.75
456 457 9.691362 TTTGAGTTTTTAGCAAACCAGATTATC 57.309 29.630 0.00 0.00 0.00 1.75
457 458 7.826690 TGAGTTTTTAGCAAACCAGATTATCC 58.173 34.615 0.00 0.00 0.00 2.59
458 459 7.450014 TGAGTTTTTAGCAAACCAGATTATCCA 59.550 33.333 0.00 0.00 0.00 3.41
459 460 8.366359 AGTTTTTAGCAAACCAGATTATCCAT 57.634 30.769 0.00 0.00 0.00 3.41
460 461 9.474313 AGTTTTTAGCAAACCAGATTATCCATA 57.526 29.630 0.00 0.00 0.00 2.74
463 464 8.635765 TTTAGCAAACCAGATTATCCATATCC 57.364 34.615 0.00 0.00 0.00 2.59
464 465 6.204852 AGCAAACCAGATTATCCATATCCA 57.795 37.500 0.00 0.00 0.00 3.41
465 466 6.006449 AGCAAACCAGATTATCCATATCCAC 58.994 40.000 0.00 0.00 0.00 4.02
466 467 5.106555 GCAAACCAGATTATCCATATCCACG 60.107 44.000 0.00 0.00 0.00 4.94
467 468 6.230472 CAAACCAGATTATCCATATCCACGA 58.770 40.000 0.00 0.00 0.00 4.35
468 469 6.627087 AACCAGATTATCCATATCCACGAT 57.373 37.500 0.00 0.00 0.00 3.73
469 470 6.627087 ACCAGATTATCCATATCCACGATT 57.373 37.500 0.00 0.00 0.00 3.34
470 471 7.020827 ACCAGATTATCCATATCCACGATTT 57.979 36.000 0.00 0.00 0.00 2.17
471 472 7.106239 ACCAGATTATCCATATCCACGATTTC 58.894 38.462 0.00 0.00 0.00 2.17
472 473 7.105588 CCAGATTATCCATATCCACGATTTCA 58.894 38.462 0.00 0.00 0.00 2.69
473 474 7.772292 CCAGATTATCCATATCCACGATTTCAT 59.228 37.037 0.00 0.00 0.00 2.57
474 475 9.170734 CAGATTATCCATATCCACGATTTCATT 57.829 33.333 0.00 0.00 0.00 2.57
475 476 9.170734 AGATTATCCATATCCACGATTTCATTG 57.829 33.333 0.00 0.00 0.00 2.82
476 477 7.686438 TTATCCATATCCACGATTTCATTGG 57.314 36.000 0.00 0.00 0.00 3.16
477 478 5.303259 TCCATATCCACGATTTCATTGGA 57.697 39.130 0.00 0.00 43.60 3.53
483 484 4.204012 TCCACGATTTCATTGGATAACCC 58.796 43.478 0.00 0.00 34.35 4.11
484 485 3.951037 CCACGATTTCATTGGATAACCCA 59.049 43.478 0.00 0.00 44.93 4.51
497 498 6.658188 TGGATAACCCAAACAAGGTTTTAG 57.342 37.500 0.00 0.00 45.46 1.85
498 499 5.540719 TGGATAACCCAAACAAGGTTTTAGG 59.459 40.000 0.00 6.26 45.46 2.69
499 500 3.830744 AACCCAAACAAGGTTTTAGGC 57.169 42.857 7.31 0.00 45.46 3.93
500 501 1.684450 ACCCAAACAAGGTTTTAGGCG 59.316 47.619 7.31 0.00 32.05 5.52
501 502 1.000394 CCCAAACAAGGTTTTAGGCGG 60.000 52.381 0.00 0.00 0.00 6.13
502 503 1.684450 CCAAACAAGGTTTTAGGCGGT 59.316 47.619 0.00 0.00 0.00 5.68
503 504 2.101750 CCAAACAAGGTTTTAGGCGGTT 59.898 45.455 0.00 0.00 0.00 4.44
504 505 3.318557 CCAAACAAGGTTTTAGGCGGTTA 59.681 43.478 0.00 0.00 0.00 2.85
505 506 4.021807 CCAAACAAGGTTTTAGGCGGTTAT 60.022 41.667 0.00 0.00 0.00 1.89
506 507 5.183522 CCAAACAAGGTTTTAGGCGGTTATA 59.816 40.000 0.00 0.00 0.00 0.98
507 508 6.294620 CCAAACAAGGTTTTAGGCGGTTATAA 60.295 38.462 0.00 0.00 0.00 0.98
508 509 5.885230 ACAAGGTTTTAGGCGGTTATAAC 57.115 39.130 7.09 7.09 0.00 1.89
509 510 5.315348 ACAAGGTTTTAGGCGGTTATAACA 58.685 37.500 17.16 0.00 0.00 2.41
510 511 5.413523 ACAAGGTTTTAGGCGGTTATAACAG 59.586 40.000 17.16 14.03 0.00 3.16
511 512 5.425196 AGGTTTTAGGCGGTTATAACAGA 57.575 39.130 18.40 0.00 0.00 3.41
512 513 5.997843 AGGTTTTAGGCGGTTATAACAGAT 58.002 37.500 18.40 8.98 0.00 2.90
513 514 6.420638 AGGTTTTAGGCGGTTATAACAGATT 58.579 36.000 18.40 8.37 0.00 2.40
514 515 6.888088 AGGTTTTAGGCGGTTATAACAGATTT 59.112 34.615 18.40 6.22 0.00 2.17
515 516 7.395206 AGGTTTTAGGCGGTTATAACAGATTTT 59.605 33.333 18.40 4.11 0.00 1.82
516 517 8.676401 GGTTTTAGGCGGTTATAACAGATTTTA 58.324 33.333 18.40 3.30 0.00 1.52
517 518 9.494479 GTTTTAGGCGGTTATAACAGATTTTAC 57.506 33.333 18.40 5.96 0.00 2.01
518 519 5.978934 AGGCGGTTATAACAGATTTTACG 57.021 39.130 18.40 10.29 0.00 3.18
519 520 5.422145 AGGCGGTTATAACAGATTTTACGT 58.578 37.500 18.40 0.00 0.00 3.57
520 521 5.876460 AGGCGGTTATAACAGATTTTACGTT 59.124 36.000 18.40 1.43 0.00 3.99
521 522 6.372381 AGGCGGTTATAACAGATTTTACGTTT 59.628 34.615 18.40 1.14 0.00 3.60
522 523 7.548780 AGGCGGTTATAACAGATTTTACGTTTA 59.451 33.333 18.40 0.00 0.00 2.01
523 524 8.174422 GGCGGTTATAACAGATTTTACGTTTAA 58.826 33.333 18.40 0.00 0.00 1.52
524 525 9.202545 GCGGTTATAACAGATTTTACGTTTAAG 57.797 33.333 18.40 0.00 0.00 1.85
533 534 9.511144 ACAGATTTTACGTTTAAGAAAAACTGG 57.489 29.630 23.27 12.63 42.55 4.00
534 535 9.511144 CAGATTTTACGTTTAAGAAAAACTGGT 57.489 29.630 16.75 0.00 38.38 4.00
538 539 9.558648 TTTTACGTTTAAGAAAAACTGGTTCTC 57.441 29.630 0.00 0.00 34.19 2.87
539 540 6.127810 ACGTTTAAGAAAAACTGGTTCTCC 57.872 37.500 0.00 0.00 34.19 3.71
540 541 5.648960 ACGTTTAAGAAAAACTGGTTCTCCA 59.351 36.000 0.00 0.00 42.05 3.86
541 542 5.969435 CGTTTAAGAAAAACTGGTTCTCCAC 59.031 40.000 0.00 0.00 39.03 4.02
542 543 6.403855 CGTTTAAGAAAAACTGGTTCTCCACA 60.404 38.462 0.00 0.00 39.03 4.17
543 544 7.317390 GTTTAAGAAAAACTGGTTCTCCACAA 58.683 34.615 0.00 0.00 39.03 3.33
544 545 5.993748 AAGAAAAACTGGTTCTCCACAAA 57.006 34.783 0.00 0.00 39.03 2.83
545 546 5.324784 AGAAAAACTGGTTCTCCACAAAC 57.675 39.130 0.00 0.00 39.03 2.93
546 547 4.770010 AGAAAAACTGGTTCTCCACAAACA 59.230 37.500 0.00 0.00 39.03 2.83
547 548 4.450082 AAAACTGGTTCTCCACAAACAC 57.550 40.909 0.00 0.00 39.03 3.32
548 549 2.052782 ACTGGTTCTCCACAAACACC 57.947 50.000 0.00 0.00 39.03 4.16
549 550 0.944386 CTGGTTCTCCACAAACACCG 59.056 55.000 0.00 0.00 39.03 4.94
550 551 0.253610 TGGTTCTCCACAAACACCGT 59.746 50.000 0.00 0.00 39.03 4.83
551 552 1.485480 TGGTTCTCCACAAACACCGTA 59.515 47.619 0.00 0.00 39.03 4.02
552 553 2.105134 TGGTTCTCCACAAACACCGTAT 59.895 45.455 0.00 0.00 39.03 3.06
553 554 2.740447 GGTTCTCCACAAACACCGTATC 59.260 50.000 0.00 0.00 0.00 2.24
554 555 2.740447 GTTCTCCACAAACACCGTATCC 59.260 50.000 0.00 0.00 0.00 2.59
555 556 1.972075 TCTCCACAAACACCGTATCCA 59.028 47.619 0.00 0.00 0.00 3.41
556 557 2.369203 TCTCCACAAACACCGTATCCAA 59.631 45.455 0.00 0.00 0.00 3.53
557 558 3.142951 CTCCACAAACACCGTATCCAAA 58.857 45.455 0.00 0.00 0.00 3.28
558 559 2.879646 TCCACAAACACCGTATCCAAAC 59.120 45.455 0.00 0.00 0.00 2.93
559 560 2.619177 CCACAAACACCGTATCCAAACA 59.381 45.455 0.00 0.00 0.00 2.83
560 561 3.066900 CCACAAACACCGTATCCAAACAA 59.933 43.478 0.00 0.00 0.00 2.83
561 562 4.039032 CACAAACACCGTATCCAAACAAC 58.961 43.478 0.00 0.00 0.00 3.32
562 563 3.067040 ACAAACACCGTATCCAAACAACC 59.933 43.478 0.00 0.00 0.00 3.77
563 564 1.900245 ACACCGTATCCAAACAACCC 58.100 50.000 0.00 0.00 0.00 4.11
564 565 1.170442 CACCGTATCCAAACAACCCC 58.830 55.000 0.00 0.00 0.00 4.95
571 572 4.563993 CGTATCCAAACAACCCCTTAGTGA 60.564 45.833 0.00 0.00 0.00 3.41
586 587 6.406624 CCCCTTAGTGATCTAAACGCTCTTAA 60.407 42.308 0.00 0.00 35.98 1.85
588 589 7.711339 CCCTTAGTGATCTAAACGCTCTTAAAT 59.289 37.037 0.00 0.00 35.98 1.40
671 675 6.016610 ACAATAGAGGTAAACATTGCGTTGTT 60.017 34.615 0.00 0.00 41.49 2.83
675 679 5.761234 AGAGGTAAACATTGCGTTGTTTCTA 59.239 36.000 17.10 2.42 44.39 2.10
677 681 6.977213 AGGTAAACATTGCGTTGTTTCTAAT 58.023 32.000 17.10 3.82 44.39 1.73
678 682 8.101654 AGGTAAACATTGCGTTGTTTCTAATA 57.898 30.769 17.10 1.22 44.39 0.98
680 684 8.846607 GGTAAACATTGCGTTGTTTCTAATAAG 58.153 33.333 17.10 0.00 44.39 1.73
681 685 9.389570 GTAAACATTGCGTTGTTTCTAATAAGT 57.610 29.630 17.10 0.00 44.39 2.24
682 686 7.851822 AACATTGCGTTGTTTCTAATAAGTG 57.148 32.000 0.00 0.00 36.43 3.16
683 687 5.856455 ACATTGCGTTGTTTCTAATAAGTGC 59.144 36.000 0.00 0.00 0.00 4.40
684 688 5.682943 TTGCGTTGTTTCTAATAAGTGCT 57.317 34.783 0.00 0.00 0.00 4.40
732 737 7.747799 GGCATGATGATTTTAATGATACTCACG 59.252 37.037 0.00 0.00 0.00 4.35
755 760 8.101510 CACGTAAAAATAGTAATTGCAACATGC 58.898 33.333 0.00 0.00 45.29 4.06
801 806 5.476599 TGACAAGCACATTTAAGCCTAACAT 59.523 36.000 0.00 0.00 0.00 2.71
803 808 7.339212 TGACAAGCACATTTAAGCCTAACATAT 59.661 33.333 0.00 0.00 0.00 1.78
804 809 8.746052 ACAAGCACATTTAAGCCTAACATATA 57.254 30.769 0.00 0.00 0.00 0.86
843 848 9.491675 AGATTTTGTGATCAAACAATTTATGCA 57.508 25.926 0.00 0.00 42.28 3.96
846 851 6.709145 TGTGATCAAACAATTTATGCAAGC 57.291 33.333 0.00 0.00 0.00 4.01
856 861 8.611654 AACAATTTATGCAAGCAAGAAAAGAT 57.388 26.923 0.00 0.00 0.00 2.40
876 881 7.670009 AAGATGAGAAGAGAGTGACAATTTG 57.330 36.000 0.00 0.00 0.00 2.32
878 883 6.649973 AGATGAGAAGAGAGTGACAATTTGTG 59.350 38.462 6.80 0.00 0.00 3.33
898 903 1.215014 TGCGTTGCTCGACTTGTCTG 61.215 55.000 6.11 0.00 42.86 3.51
1028 1039 1.524482 GCAGTCCCACTCCCATCTC 59.476 63.158 0.00 0.00 0.00 2.75
1029 1040 0.980231 GCAGTCCCACTCCCATCTCT 60.980 60.000 0.00 0.00 0.00 3.10
1603 1614 2.287368 CGTTTGGGAGGTAAAACACAGC 60.287 50.000 0.00 0.00 36.31 4.40
1620 1631 1.131126 CAGCAATTGTCTACCCGCTTG 59.869 52.381 7.40 0.00 0.00 4.01
1798 1809 5.411977 TGTTAACCTCAACAACTGTTTTCGA 59.588 36.000 2.48 0.00 35.53 3.71
1986 1997 6.101332 GCTTAATTCAAGTGCAATGATTGGA 58.899 36.000 7.35 0.36 36.55 3.53
2050 2061 7.294245 TGATTCTCATCCTTATCCATTCTTCCT 59.706 37.037 0.00 0.00 0.00 3.36
2096 2107 4.128925 TGATCTTATCTGCTTGACGCTT 57.871 40.909 0.00 0.00 40.11 4.68
2103 2114 3.106242 TCTGCTTGACGCTTCTTTACA 57.894 42.857 0.00 0.00 40.11 2.41
2146 2157 2.104451 ACAAATTTGGCTGCATGTCCAA 59.896 40.909 21.74 10.14 40.31 3.53
2315 2333 0.525455 GGCTTAAAAATCGGCGCCTG 60.525 55.000 26.68 18.23 34.80 4.85
2399 2417 1.837051 TCCCAAGGCGCCGATATCT 60.837 57.895 23.20 0.00 0.00 1.98
2433 2451 1.421382 CAAATGTGCTTGCTTTCCGG 58.579 50.000 0.00 0.00 0.00 5.14
2437 2455 4.594854 TGCTTGCTTTCCGGCCCA 62.595 61.111 0.00 0.00 0.00 5.36
2495 2534 1.961277 CCCATATTCGCCGTGGCTC 60.961 63.158 9.55 0.00 39.32 4.70
2512 2551 1.951181 CTCGGCGCGAATTCGACAAA 61.951 55.000 31.01 12.05 43.02 2.83
2592 2631 4.329545 GGTGGAGAGGTTGCCGCA 62.330 66.667 0.00 0.00 36.41 5.69
2593 2632 2.281484 GTGGAGAGGTTGCCGCAA 60.281 61.111 0.38 0.38 34.84 4.85
2611 2650 3.363084 CGCAACGAAACCTTCTCTCTTTC 60.363 47.826 0.00 0.00 0.00 2.62
2613 2652 4.381411 CAACGAAACCTTCTCTCTTTCCT 58.619 43.478 0.00 0.00 0.00 3.36
2617 2656 1.734655 ACCTTCTCTCTTTCCTGGCA 58.265 50.000 0.00 0.00 0.00 4.92
2624 2663 3.450457 TCTCTCTTTCCTGGCAGAGAATC 59.550 47.826 17.94 0.00 43.97 2.52
2634 2673 3.502191 GGCAGAGAATCGCCTATCTAG 57.498 52.381 0.00 0.00 46.36 2.43
2635 2674 2.416701 GGCAGAGAATCGCCTATCTAGC 60.417 54.545 0.00 0.00 46.36 3.42
2644 2683 0.889306 GCCTATCTAGCGGTACTGGG 59.111 60.000 3.34 0.00 0.00 4.45
2645 2684 0.889306 CCTATCTAGCGGTACTGGGC 59.111 60.000 3.34 0.00 0.00 5.36
2646 2685 0.522180 CTATCTAGCGGTACTGGGCG 59.478 60.000 3.34 0.00 0.00 6.13
2647 2686 0.892358 TATCTAGCGGTACTGGGCGG 60.892 60.000 3.34 0.03 0.00 6.13
2648 2687 2.923634 ATCTAGCGGTACTGGGCGGT 62.924 60.000 3.34 1.45 0.00 5.68
2649 2688 3.426117 CTAGCGGTACTGGGCGGTG 62.426 68.421 3.34 0.00 0.00 4.94
2653 2692 4.404098 GGTACTGGGCGGTGGGTG 62.404 72.222 0.00 0.00 0.00 4.61
2654 2693 4.404098 GTACTGGGCGGTGGGTGG 62.404 72.222 0.00 0.00 0.00 4.61
2674 2713 4.820744 CCGGGATTGGCAGGGTGG 62.821 72.222 0.00 0.00 0.00 4.61
2675 2714 4.047125 CGGGATTGGCAGGGTGGT 62.047 66.667 0.00 0.00 0.00 4.16
2676 2715 2.362889 GGGATTGGCAGGGTGGTG 60.363 66.667 0.00 0.00 0.00 4.17
2677 2716 2.362889 GGATTGGCAGGGTGGTGG 60.363 66.667 0.00 0.00 0.00 4.61
2678 2717 3.070576 GATTGGCAGGGTGGTGGC 61.071 66.667 0.00 0.00 43.25 5.01
2712 2751 3.467226 GGGGGCGAATCTGGACGA 61.467 66.667 0.00 0.00 0.00 4.20
2713 2752 2.808206 GGGGGCGAATCTGGACGAT 61.808 63.158 0.00 0.00 0.00 3.73
2714 2753 1.146263 GGGGCGAATCTGGACGATT 59.854 57.895 0.00 0.00 44.87 3.34
2715 2754 1.160329 GGGGCGAATCTGGACGATTG 61.160 60.000 0.00 0.00 42.31 2.67
2716 2755 1.643832 GGCGAATCTGGACGATTGC 59.356 57.895 0.00 0.00 42.31 3.56
2717 2756 0.811616 GGCGAATCTGGACGATTGCT 60.812 55.000 0.00 0.00 42.31 3.91
2718 2757 1.009829 GCGAATCTGGACGATTGCTT 58.990 50.000 0.00 0.00 42.31 3.91
2719 2758 1.398390 GCGAATCTGGACGATTGCTTT 59.602 47.619 0.00 0.00 42.31 3.51
2720 2759 2.607635 GCGAATCTGGACGATTGCTTTA 59.392 45.455 0.00 0.00 42.31 1.85
2721 2760 3.544244 GCGAATCTGGACGATTGCTTTAC 60.544 47.826 0.00 0.00 42.31 2.01
2722 2761 3.865745 CGAATCTGGACGATTGCTTTACT 59.134 43.478 0.00 0.00 42.31 2.24
2723 2762 4.330074 CGAATCTGGACGATTGCTTTACTT 59.670 41.667 0.00 0.00 42.31 2.24
2724 2763 5.163854 CGAATCTGGACGATTGCTTTACTTT 60.164 40.000 0.00 0.00 42.31 2.66
2725 2764 6.575162 AATCTGGACGATTGCTTTACTTTT 57.425 33.333 0.00 0.00 40.76 2.27
2726 2765 5.607119 TCTGGACGATTGCTTTACTTTTC 57.393 39.130 0.00 0.00 0.00 2.29
2727 2766 5.060506 TCTGGACGATTGCTTTACTTTTCA 58.939 37.500 0.00 0.00 0.00 2.69
2728 2767 5.049680 TCTGGACGATTGCTTTACTTTTCAC 60.050 40.000 0.00 0.00 0.00 3.18
2729 2768 4.148891 GGACGATTGCTTTACTTTTCACG 58.851 43.478 0.00 0.00 0.00 4.35
2730 2769 4.084223 GGACGATTGCTTTACTTTTCACGA 60.084 41.667 0.00 0.00 0.00 4.35
2731 2770 5.390567 GGACGATTGCTTTACTTTTCACGAT 60.391 40.000 0.00 0.00 0.00 3.73
2732 2771 6.183360 GGACGATTGCTTTACTTTTCACGATA 60.183 38.462 0.00 0.00 0.00 2.92
2733 2772 6.762108 ACGATTGCTTTACTTTTCACGATAG 58.238 36.000 0.00 0.00 46.19 2.08
2746 2785 1.007271 CGATAGTGTGGCCTAGGCG 60.007 63.158 27.24 6.39 43.06 5.52
2747 2786 1.735376 CGATAGTGTGGCCTAGGCGT 61.735 60.000 27.24 11.49 43.06 5.68
2748 2787 0.249489 GATAGTGTGGCCTAGGCGTG 60.249 60.000 27.24 0.00 43.06 5.34
2749 2788 0.976073 ATAGTGTGGCCTAGGCGTGT 60.976 55.000 27.24 12.19 43.06 4.49
2750 2789 1.189524 TAGTGTGGCCTAGGCGTGTT 61.190 55.000 27.24 13.69 43.06 3.32
2751 2790 1.599797 GTGTGGCCTAGGCGTGTTT 60.600 57.895 27.24 0.00 43.06 2.83
2752 2791 1.149627 TGTGGCCTAGGCGTGTTTT 59.850 52.632 27.24 0.00 43.06 2.43
2753 2792 0.887387 TGTGGCCTAGGCGTGTTTTC 60.887 55.000 27.24 12.09 43.06 2.29
2754 2793 1.302993 TGGCCTAGGCGTGTTTTCC 60.303 57.895 27.24 11.34 43.06 3.13
2755 2794 2.044555 GGCCTAGGCGTGTTTTCCC 61.045 63.158 27.24 6.39 43.06 3.97
2756 2795 2.044555 GCCTAGGCGTGTTTTCCCC 61.045 63.158 20.16 0.00 0.00 4.81
2757 2796 1.683441 CCTAGGCGTGTTTTCCCCT 59.317 57.895 0.00 0.00 0.00 4.79
2758 2797 0.037734 CCTAGGCGTGTTTTCCCCTT 59.962 55.000 0.00 0.00 0.00 3.95
2759 2798 1.450025 CTAGGCGTGTTTTCCCCTTC 58.550 55.000 0.00 0.00 0.00 3.46
2760 2799 0.037160 TAGGCGTGTTTTCCCCTTCC 59.963 55.000 0.00 0.00 0.00 3.46
2761 2800 2.622962 GGCGTGTTTTCCCCTTCCG 61.623 63.158 0.00 0.00 0.00 4.30
2762 2801 2.951458 CGTGTTTTCCCCTTCCGC 59.049 61.111 0.00 0.00 0.00 5.54
2763 2802 2.622962 CGTGTTTTCCCCTTCCGCC 61.623 63.158 0.00 0.00 0.00 6.13
2764 2803 2.281900 TGTTTTCCCCTTCCGCCG 60.282 61.111 0.00 0.00 0.00 6.46
2765 2804 3.060000 GTTTTCCCCTTCCGCCGG 61.060 66.667 0.00 0.00 0.00 6.13
2766 2805 3.250734 TTTTCCCCTTCCGCCGGA 61.251 61.111 5.05 0.00 0.00 5.14
2767 2806 3.262448 TTTTCCCCTTCCGCCGGAG 62.262 63.158 5.05 0.00 31.21 4.63
2808 2847 3.411517 CTGGGTTCGGCCTGGGAT 61.412 66.667 0.00 0.00 37.43 3.85
2809 2848 3.406595 CTGGGTTCGGCCTGGGATC 62.407 68.421 0.00 0.00 37.43 3.36
2810 2849 4.547367 GGGTTCGGCCTGGGATCG 62.547 72.222 0.00 0.00 37.43 3.69
2823 2862 3.065567 GATCGCCGGGCCCAAAAA 61.066 61.111 24.92 4.19 0.00 1.94
2824 2863 3.350909 GATCGCCGGGCCCAAAAAC 62.351 63.158 24.92 4.37 0.00 2.43
2833 2872 4.050934 CCCAAAAACGGGCCGAGC 62.051 66.667 35.78 0.00 40.07 5.03
2853 2892 2.399611 GCGGATTTCGGCGTCTTG 59.600 61.111 6.85 0.00 39.69 3.02
2854 2893 3.089784 CGGATTTCGGCGTCTTGG 58.910 61.111 6.85 0.00 34.75 3.61
2855 2894 2.461110 CGGATTTCGGCGTCTTGGG 61.461 63.158 6.85 0.00 34.75 4.12
2856 2895 2.112815 GGATTTCGGCGTCTTGGGG 61.113 63.158 6.85 0.00 0.00 4.96
2857 2896 2.045340 ATTTCGGCGTCTTGGGGG 60.045 61.111 6.85 0.00 0.00 5.40
2898 2937 4.753877 GCCGGCGCGAAAAAGGTC 62.754 66.667 12.58 0.00 0.00 3.85
2899 2938 4.439472 CCGGCGCGAAAAAGGTCG 62.439 66.667 12.10 0.00 43.98 4.79
2905 2944 3.263941 CGAAAAAGGTCGCCCTGG 58.736 61.111 0.00 0.00 41.56 4.45
2906 2945 2.332654 CGAAAAAGGTCGCCCTGGG 61.333 63.158 8.86 8.86 41.56 4.45
2907 2946 1.977009 GAAAAAGGTCGCCCTGGGG 60.977 63.158 16.03 4.75 41.56 4.96
2934 2973 4.671569 GGGGCGCGGCTAGAGATG 62.672 72.222 32.30 0.00 0.00 2.90
2936 2975 4.292178 GGCGCGGCTAGAGATGCT 62.292 66.667 27.05 0.00 0.00 3.79
2937 2976 2.732843 GCGCGGCTAGAGATGCTC 60.733 66.667 8.83 0.00 0.00 4.26
2945 2984 3.324993 GGCTAGAGATGCTCTAATGCAC 58.675 50.000 13.97 4.47 46.33 4.57
2958 2997 5.180868 GCTCTAATGCACTGGGATATGAAAG 59.819 44.000 0.00 0.00 0.00 2.62
3215 3313 6.545504 TCATCTTCAGTCTGCTTTTAACAC 57.454 37.500 0.00 0.00 0.00 3.32
3471 3569 5.830991 AGGCAACACAAATGAAGTAGGTTTA 59.169 36.000 0.00 0.00 41.41 2.01
3512 3610 2.024414 AGAAACCACCACTTCTGTTGC 58.976 47.619 0.00 0.00 30.67 4.17
4280 4443 5.460748 TGTGTTACTATCGTGTGAAAGTGTG 59.539 40.000 0.00 0.00 0.00 3.82
4381 4545 3.736720 GAGACGGATATTACCAAACCCC 58.263 50.000 0.00 0.00 0.00 4.95
4399 4563 3.908103 ACCCCTAGTTTTTCTGAGTAGCA 59.092 43.478 0.00 0.00 0.00 3.49
4810 4986 0.593128 ATTCAGGTGAAGCACAACGC 59.407 50.000 0.00 0.00 41.74 4.84
4996 5172 2.416566 CCGTGTCACAGAGAAGGATGAG 60.417 54.545 3.42 0.00 0.00 2.90
5368 5544 5.246203 AGAAGTTAGTGGTGATAAGCACTCA 59.754 40.000 18.36 5.13 46.86 3.41
5991 6175 6.723298 TTGATGTGTGGGATTGTAAAGTTT 57.277 33.333 0.00 0.00 0.00 2.66
6007 6191 9.710979 TTGTAAAGTTTCAGTAAATTGACGAAG 57.289 29.630 0.00 0.00 0.00 3.79
6020 6204 7.951530 AAATTGACGAAGCTCATTTGAATTT 57.048 28.000 0.00 0.00 0.00 1.82
6253 6450 5.703130 GGATTTCGGCAAAGATTAGCTCTAT 59.297 40.000 0.00 0.00 32.41 1.98
6281 6478 3.323751 AACACACTACGGATGTTACCC 57.676 47.619 0.00 0.00 34.84 3.69
6328 6525 4.326826 TGCTTCCATAGAGTCCAACAAAG 58.673 43.478 0.00 0.00 0.00 2.77
6342 6539 3.243035 CCAACAAAGAAGCATGACGAACA 60.243 43.478 0.00 0.00 0.00 3.18
6396 6593 0.739813 GTTTGCGCCGACTAGTCCAT 60.740 55.000 17.23 0.00 0.00 3.41
6442 6639 4.154296 GGAGCATGCCCAGATCAC 57.846 61.111 15.66 0.00 0.00 3.06
6443 6640 1.527844 GGAGCATGCCCAGATCACC 60.528 63.158 15.66 1.82 0.00 4.02
6514 6711 2.364647 TGCAACAGCAAATGATCAACCA 59.635 40.909 0.00 0.00 34.85 3.67
6515 6712 2.733026 GCAACAGCAAATGATCAACCAC 59.267 45.455 0.00 0.00 0.00 4.16
6516 6713 3.319755 CAACAGCAAATGATCAACCACC 58.680 45.455 0.00 0.00 0.00 4.61
6530 6727 1.186267 ACCACCGTGTCTTCCTCCTC 61.186 60.000 0.00 0.00 0.00 3.71
6560 6758 1.430369 AAGCAGGGTGAAGCCTCCTT 61.430 55.000 0.00 0.00 37.43 3.36
6575 6773 1.824852 CTCCTTTTGTAACCCATGCCC 59.175 52.381 0.00 0.00 0.00 5.36
6608 6806 2.169769 CCGAGGCCCAAAGTCTGTATTA 59.830 50.000 0.00 0.00 0.00 0.98
6612 6810 5.357032 CGAGGCCCAAAGTCTGTATTAAATT 59.643 40.000 0.00 0.00 0.00 1.82
6669 6867 0.035630 AGCTCTTCCAAATCGCAGCT 60.036 50.000 0.00 0.00 32.28 4.24
6732 6930 2.103094 TGCAGAAGCTGTTGTGTACTCT 59.897 45.455 0.00 0.00 42.74 3.24
6751 6949 0.112995 TCCAACAGCATTCCAAGCCT 59.887 50.000 0.00 0.00 0.00 4.58
6783 6981 2.216750 CTTCATTGGCCGGCACAAGG 62.217 60.000 30.85 28.00 0.00 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.046023 CATGCCTGGCTTGGTCGA 60.046 61.111 22.99 0.81 31.40 4.20
1 2 3.136123 CCATGCCTGGCTTGGTCG 61.136 66.667 34.05 16.91 45.15 4.79
10 11 2.169352 ACTACTTAGCTCACCATGCCTG 59.831 50.000 0.00 0.00 0.00 4.85
11 12 2.472029 ACTACTTAGCTCACCATGCCT 58.528 47.619 0.00 0.00 0.00 4.75
12 13 2.990066 ACTACTTAGCTCACCATGCC 57.010 50.000 0.00 0.00 0.00 4.40
13 14 4.920640 TCTACTACTTAGCTCACCATGC 57.079 45.455 0.00 0.00 0.00 4.06
14 15 6.701145 TCTTCTACTACTTAGCTCACCATG 57.299 41.667 0.00 0.00 0.00 3.66
15 16 5.300792 GCTCTTCTACTACTTAGCTCACCAT 59.699 44.000 0.00 0.00 0.00 3.55
16 17 4.641094 GCTCTTCTACTACTTAGCTCACCA 59.359 45.833 0.00 0.00 0.00 4.17
17 18 4.037089 GGCTCTTCTACTACTTAGCTCACC 59.963 50.000 0.00 0.00 0.00 4.02
18 19 4.260866 CGGCTCTTCTACTACTTAGCTCAC 60.261 50.000 0.00 0.00 0.00 3.51
19 20 3.878103 CGGCTCTTCTACTACTTAGCTCA 59.122 47.826 0.00 0.00 0.00 4.26
20 21 3.251487 CCGGCTCTTCTACTACTTAGCTC 59.749 52.174 0.00 0.00 0.00 4.09
21 22 3.215975 CCGGCTCTTCTACTACTTAGCT 58.784 50.000 0.00 0.00 0.00 3.32
22 23 2.950975 ACCGGCTCTTCTACTACTTAGC 59.049 50.000 0.00 0.00 0.00 3.09
23 24 3.248125 CGACCGGCTCTTCTACTACTTAG 59.752 52.174 0.00 0.00 0.00 2.18
24 25 3.118629 TCGACCGGCTCTTCTACTACTTA 60.119 47.826 0.00 0.00 0.00 2.24
25 26 2.015587 CGACCGGCTCTTCTACTACTT 58.984 52.381 0.00 0.00 0.00 2.24
26 27 1.209019 TCGACCGGCTCTTCTACTACT 59.791 52.381 0.00 0.00 0.00 2.57
27 28 1.598601 CTCGACCGGCTCTTCTACTAC 59.401 57.143 0.00 0.00 0.00 2.73
28 29 1.474677 CCTCGACCGGCTCTTCTACTA 60.475 57.143 0.00 0.00 0.00 1.82
29 30 0.748729 CCTCGACCGGCTCTTCTACT 60.749 60.000 0.00 0.00 0.00 2.57
30 31 1.728672 CCTCGACCGGCTCTTCTAC 59.271 63.158 0.00 0.00 0.00 2.59
31 32 2.119655 GCCTCGACCGGCTCTTCTA 61.120 63.158 0.00 0.00 46.63 2.10
32 33 3.453679 GCCTCGACCGGCTCTTCT 61.454 66.667 0.00 0.00 46.63 2.85
58 59 3.129502 CAGACCACGCTGCCATGG 61.130 66.667 7.63 7.63 42.13 3.66
59 60 2.359107 ACAGACCACGCTGCCATG 60.359 61.111 0.00 0.00 39.51 3.66
60 61 2.046892 GACAGACCACGCTGCCAT 60.047 61.111 0.00 0.00 39.51 4.40
61 62 4.662961 CGACAGACCACGCTGCCA 62.663 66.667 0.00 0.00 39.51 4.92
71 72 4.034258 TCGTGGTCGCCGACAGAC 62.034 66.667 20.08 13.41 37.86 3.51
75 76 4.688419 TTCGTCGTGGTCGCCGAC 62.688 66.667 9.15 9.15 46.33 4.79
76 77 4.688419 GTTCGTCGTGGTCGCCGA 62.688 66.667 0.00 0.00 45.12 5.54
79 80 4.688419 TCGGTTCGTCGTGGTCGC 62.688 66.667 0.00 0.00 36.96 5.19
80 81 2.798262 GTCGGTTCGTCGTGGTCG 60.798 66.667 0.00 0.00 38.55 4.79
81 82 1.273455 CTTGTCGGTTCGTCGTGGTC 61.273 60.000 0.00 0.00 0.00 4.02
82 83 1.299620 CTTGTCGGTTCGTCGTGGT 60.300 57.895 0.00 0.00 0.00 4.16
83 84 2.019951 CCTTGTCGGTTCGTCGTGG 61.020 63.158 0.00 0.00 0.00 4.94
84 85 0.595567 TTCCTTGTCGGTTCGTCGTG 60.596 55.000 0.00 0.00 0.00 4.35
85 86 0.595825 GTTCCTTGTCGGTTCGTCGT 60.596 55.000 0.00 0.00 0.00 4.34
86 87 0.318445 AGTTCCTTGTCGGTTCGTCG 60.318 55.000 0.00 0.00 0.00 5.12
87 88 1.137513 CAGTTCCTTGTCGGTTCGTC 58.862 55.000 0.00 0.00 0.00 4.20
88 89 0.878961 GCAGTTCCTTGTCGGTTCGT 60.879 55.000 0.00 0.00 0.00 3.85
89 90 1.860078 GCAGTTCCTTGTCGGTTCG 59.140 57.895 0.00 0.00 0.00 3.95
90 91 1.860078 CGCAGTTCCTTGTCGGTTC 59.140 57.895 0.00 0.00 0.00 3.62
91 92 2.251642 GCGCAGTTCCTTGTCGGTT 61.252 57.895 0.30 0.00 0.00 4.44
92 93 2.665185 GCGCAGTTCCTTGTCGGT 60.665 61.111 0.30 0.00 0.00 4.69
93 94 2.664851 TGCGCAGTTCCTTGTCGG 60.665 61.111 5.66 0.00 0.00 4.79
94 95 1.568612 ATGTGCGCAGTTCCTTGTCG 61.569 55.000 12.22 0.00 0.00 4.35
95 96 0.166814 GATGTGCGCAGTTCCTTGTC 59.833 55.000 12.22 0.00 0.00 3.18
96 97 0.250467 AGATGTGCGCAGTTCCTTGT 60.250 50.000 12.22 0.00 0.00 3.16
97 98 0.445436 GAGATGTGCGCAGTTCCTTG 59.555 55.000 12.22 0.00 0.00 3.61
98 99 0.322975 AGAGATGTGCGCAGTTCCTT 59.677 50.000 12.22 0.00 0.00 3.36
99 100 0.322975 AAGAGATGTGCGCAGTTCCT 59.677 50.000 12.22 5.68 0.00 3.36
100 101 0.445436 CAAGAGATGTGCGCAGTTCC 59.555 55.000 12.22 0.00 0.00 3.62
101 102 0.179205 GCAAGAGATGTGCGCAGTTC 60.179 55.000 12.22 11.28 31.20 3.01
102 103 1.580845 GGCAAGAGATGTGCGCAGTT 61.581 55.000 12.22 0.00 43.18 3.16
103 104 2.037136 GGCAAGAGATGTGCGCAGT 61.037 57.895 12.22 1.40 43.18 4.40
104 105 1.374343 ATGGCAAGAGATGTGCGCAG 61.374 55.000 12.22 0.00 43.18 5.18
105 106 0.961857 AATGGCAAGAGATGTGCGCA 60.962 50.000 5.66 5.66 43.18 6.09
106 107 1.016627 TAATGGCAAGAGATGTGCGC 58.983 50.000 0.00 0.00 43.18 6.09
107 108 2.603892 GCATAATGGCAAGAGATGTGCG 60.604 50.000 0.00 0.00 43.18 5.34
108 109 2.288030 GGCATAATGGCAAGAGATGTGC 60.288 50.000 0.00 0.00 43.14 4.57
109 110 2.031420 CGGCATAATGGCAAGAGATGTG 60.031 50.000 0.00 0.00 43.94 3.21
110 111 2.224606 CGGCATAATGGCAAGAGATGT 58.775 47.619 0.00 0.00 43.94 3.06
111 112 1.538512 CCGGCATAATGGCAAGAGATG 59.461 52.381 0.00 0.00 43.94 2.90
112 113 1.421268 TCCGGCATAATGGCAAGAGAT 59.579 47.619 0.00 0.00 43.94 2.75
113 114 0.836606 TCCGGCATAATGGCAAGAGA 59.163 50.000 0.00 0.00 43.94 3.10
114 115 1.233019 CTCCGGCATAATGGCAAGAG 58.767 55.000 0.00 0.00 43.94 2.85
115 116 0.546122 ACTCCGGCATAATGGCAAGA 59.454 50.000 0.00 0.00 43.94 3.02
116 117 0.947244 GACTCCGGCATAATGGCAAG 59.053 55.000 0.00 0.00 43.94 4.01
117 118 0.546122 AGACTCCGGCATAATGGCAA 59.454 50.000 0.00 0.00 43.94 4.52
118 119 0.179048 CAGACTCCGGCATAATGGCA 60.179 55.000 0.00 0.00 43.94 4.92
119 120 0.179045 ACAGACTCCGGCATAATGGC 60.179 55.000 0.00 0.00 39.85 4.40
120 121 1.942657 CAACAGACTCCGGCATAATGG 59.057 52.381 0.00 0.00 0.00 3.16
121 122 1.331756 GCAACAGACTCCGGCATAATG 59.668 52.381 0.00 0.00 0.00 1.90
122 123 1.668419 GCAACAGACTCCGGCATAAT 58.332 50.000 0.00 0.00 0.00 1.28
123 124 0.739462 CGCAACAGACTCCGGCATAA 60.739 55.000 0.00 0.00 0.00 1.90
124 125 1.153647 CGCAACAGACTCCGGCATA 60.154 57.895 0.00 0.00 0.00 3.14
125 126 2.434884 CGCAACAGACTCCGGCAT 60.435 61.111 0.00 0.00 0.00 4.40
126 127 4.680237 CCGCAACAGACTCCGGCA 62.680 66.667 0.00 0.00 33.77 5.69
127 128 4.681978 ACCGCAACAGACTCCGGC 62.682 66.667 0.00 0.00 44.29 6.13
128 129 2.432628 GACCGCAACAGACTCCGG 60.433 66.667 0.00 0.00 45.80 5.14
129 130 2.805353 CGACCGCAACAGACTCCG 60.805 66.667 0.00 0.00 0.00 4.63
130 131 2.432628 CCGACCGCAACAGACTCC 60.433 66.667 0.00 0.00 0.00 3.85
131 132 1.870055 TACCCGACCGCAACAGACTC 61.870 60.000 0.00 0.00 0.00 3.36
132 133 1.904865 TACCCGACCGCAACAGACT 60.905 57.895 0.00 0.00 0.00 3.24
133 134 1.735559 GTACCCGACCGCAACAGAC 60.736 63.158 0.00 0.00 0.00 3.51
134 135 2.652530 GTACCCGACCGCAACAGA 59.347 61.111 0.00 0.00 0.00 3.41
135 136 2.433664 GGTACCCGACCGCAACAG 60.434 66.667 0.00 0.00 38.87 3.16
143 144 1.218316 CTGAAGGCTGGTACCCGAC 59.782 63.158 10.07 4.94 0.00 4.79
144 145 2.656069 GCTGAAGGCTGGTACCCGA 61.656 63.158 10.07 0.00 38.06 5.14
145 146 2.125106 GCTGAAGGCTGGTACCCG 60.125 66.667 10.07 3.73 38.06 5.28
146 147 2.272471 GGCTGAAGGCTGGTACCC 59.728 66.667 10.07 0.00 41.46 3.69
154 155 1.505477 GATGATGCGAGGCTGAAGGC 61.505 60.000 0.00 0.00 41.43 4.35
155 156 1.220169 CGATGATGCGAGGCTGAAGG 61.220 60.000 0.00 0.00 0.00 3.46
156 157 0.249197 TCGATGATGCGAGGCTGAAG 60.249 55.000 0.00 0.00 35.01 3.02
157 158 0.390492 ATCGATGATGCGAGGCTGAA 59.610 50.000 0.00 0.00 44.26 3.02
158 159 0.319297 CATCGATGATGCGAGGCTGA 60.319 55.000 21.02 0.00 44.26 4.26
159 160 2.151295 CATCGATGATGCGAGGCTG 58.849 57.895 21.02 0.00 44.26 4.85
160 161 4.669411 CATCGATGATGCGAGGCT 57.331 55.556 21.02 0.00 44.26 4.58
167 168 1.563435 GCTCCGTGGCATCGATGATG 61.563 60.000 29.20 13.78 42.37 3.07
168 169 1.301244 GCTCCGTGGCATCGATGAT 60.301 57.895 29.20 0.00 0.00 2.45
169 170 2.106938 GCTCCGTGGCATCGATGA 59.893 61.111 29.20 6.11 0.00 2.92
170 171 1.953138 GAGCTCCGTGGCATCGATG 60.953 63.158 21.27 21.27 34.17 3.84
171 172 1.960040 TTGAGCTCCGTGGCATCGAT 61.960 55.000 12.15 0.00 34.17 3.59
172 173 2.645192 TTGAGCTCCGTGGCATCGA 61.645 57.895 12.15 0.00 34.17 3.59
173 174 2.125552 TTGAGCTCCGTGGCATCG 60.126 61.111 12.15 0.00 34.17 3.84
174 175 2.456119 CGTTGAGCTCCGTGGCATC 61.456 63.158 12.15 0.00 34.17 3.91
175 176 2.434884 CGTTGAGCTCCGTGGCAT 60.435 61.111 12.15 0.00 34.17 4.40
176 177 3.858868 GACGTTGAGCTCCGTGGCA 62.859 63.158 20.49 0.00 37.44 4.92
177 178 3.112709 GACGTTGAGCTCCGTGGC 61.113 66.667 20.49 4.60 37.44 5.01
178 179 2.805353 CGACGTTGAGCTCCGTGG 60.805 66.667 20.49 15.88 37.44 4.94
179 180 2.050351 ACGACGTTGAGCTCCGTG 60.050 61.111 20.49 14.83 37.44 4.94
180 181 2.254651 GACGACGTTGAGCTCCGT 59.745 61.111 16.43 16.43 40.54 4.69
181 182 2.870161 CGACGACGTTGAGCTCCG 60.870 66.667 12.15 11.12 34.56 4.63
182 183 2.504244 CCGACGACGTTGAGCTCC 60.504 66.667 16.96 0.00 37.88 4.70
183 184 3.173240 GCCGACGACGTTGAGCTC 61.173 66.667 16.96 6.82 37.88 4.09
249 250 0.320697 ATCTAATTCTACGCCCCCGC 59.679 55.000 0.00 0.00 38.22 6.13
250 251 1.337823 CCATCTAATTCTACGCCCCCG 60.338 57.143 0.00 0.00 41.14 5.73
251 252 1.610886 GCCATCTAATTCTACGCCCCC 60.611 57.143 0.00 0.00 0.00 5.40
252 253 1.071699 TGCCATCTAATTCTACGCCCC 59.928 52.381 0.00 0.00 0.00 5.80
253 254 2.543777 TGCCATCTAATTCTACGCCC 57.456 50.000 0.00 0.00 0.00 6.13
254 255 3.303132 CGTTTGCCATCTAATTCTACGCC 60.303 47.826 0.00 0.00 0.00 5.68
255 256 3.844943 GCGTTTGCCATCTAATTCTACGC 60.845 47.826 0.00 0.00 43.68 4.42
256 257 3.308595 TGCGTTTGCCATCTAATTCTACG 59.691 43.478 0.00 0.00 41.78 3.51
257 258 4.875544 TGCGTTTGCCATCTAATTCTAC 57.124 40.909 0.00 0.00 41.78 2.59
258 259 4.697828 TGTTGCGTTTGCCATCTAATTCTA 59.302 37.500 0.00 0.00 41.78 2.10
259 260 3.505680 TGTTGCGTTTGCCATCTAATTCT 59.494 39.130 0.00 0.00 41.78 2.40
260 261 3.832276 TGTTGCGTTTGCCATCTAATTC 58.168 40.909 0.00 0.00 41.78 2.17
261 262 3.255642 ACTGTTGCGTTTGCCATCTAATT 59.744 39.130 0.00 0.00 41.78 1.40
262 263 2.819608 ACTGTTGCGTTTGCCATCTAAT 59.180 40.909 0.00 0.00 41.78 1.73
263 264 2.031245 CACTGTTGCGTTTGCCATCTAA 60.031 45.455 0.00 0.00 41.78 2.10
264 265 1.535028 CACTGTTGCGTTTGCCATCTA 59.465 47.619 0.00 0.00 41.78 1.98
265 266 0.311790 CACTGTTGCGTTTGCCATCT 59.688 50.000 0.00 0.00 41.78 2.90
266 267 0.664166 CCACTGTTGCGTTTGCCATC 60.664 55.000 0.00 0.00 41.78 3.51
267 268 1.106351 TCCACTGTTGCGTTTGCCAT 61.106 50.000 0.00 0.00 41.78 4.40
268 269 1.723608 CTCCACTGTTGCGTTTGCCA 61.724 55.000 0.00 0.00 41.78 4.92
269 270 1.008538 CTCCACTGTTGCGTTTGCC 60.009 57.895 0.00 0.00 41.78 4.52
270 271 0.593128 ATCTCCACTGTTGCGTTTGC 59.407 50.000 0.00 0.00 43.20 3.68
271 272 1.872952 TCATCTCCACTGTTGCGTTTG 59.127 47.619 0.00 0.00 0.00 2.93
272 273 1.873591 GTCATCTCCACTGTTGCGTTT 59.126 47.619 0.00 0.00 0.00 3.60
273 274 1.512926 GTCATCTCCACTGTTGCGTT 58.487 50.000 0.00 0.00 0.00 4.84
274 275 0.667487 CGTCATCTCCACTGTTGCGT 60.667 55.000 0.00 0.00 0.00 5.24
275 276 0.388520 TCGTCATCTCCACTGTTGCG 60.389 55.000 0.00 0.00 0.00 4.85
276 277 1.728971 CTTCGTCATCTCCACTGTTGC 59.271 52.381 0.00 0.00 0.00 4.17
277 278 2.989840 GTCTTCGTCATCTCCACTGTTG 59.010 50.000 0.00 0.00 0.00 3.33
278 279 2.351835 CGTCTTCGTCATCTCCACTGTT 60.352 50.000 0.00 0.00 0.00 3.16
279 280 1.200252 CGTCTTCGTCATCTCCACTGT 59.800 52.381 0.00 0.00 0.00 3.55
280 281 1.468914 TCGTCTTCGTCATCTCCACTG 59.531 52.381 0.00 0.00 38.33 3.66
281 282 1.822506 TCGTCTTCGTCATCTCCACT 58.177 50.000 0.00 0.00 38.33 4.00
282 283 2.455032 CATCGTCTTCGTCATCTCCAC 58.545 52.381 0.00 0.00 38.33 4.02
283 284 1.202302 GCATCGTCTTCGTCATCTCCA 60.202 52.381 0.00 0.00 38.33 3.86
284 285 1.202302 TGCATCGTCTTCGTCATCTCC 60.202 52.381 0.00 0.00 38.33 3.71
285 286 2.194800 TGCATCGTCTTCGTCATCTC 57.805 50.000 0.00 0.00 38.33 2.75
286 287 2.654749 TTGCATCGTCTTCGTCATCT 57.345 45.000 0.00 0.00 38.33 2.90
287 288 2.532973 CGTTTGCATCGTCTTCGTCATC 60.533 50.000 0.00 0.00 38.33 2.92
288 289 1.390123 CGTTTGCATCGTCTTCGTCAT 59.610 47.619 0.00 0.00 38.33 3.06
289 290 0.781787 CGTTTGCATCGTCTTCGTCA 59.218 50.000 0.00 0.00 38.33 4.35
290 291 0.516524 GCGTTTGCATCGTCTTCGTC 60.517 55.000 12.11 0.00 42.15 4.20
291 292 0.944311 AGCGTTTGCATCGTCTTCGT 60.944 50.000 12.11 0.00 46.23 3.85
292 293 0.989164 TAGCGTTTGCATCGTCTTCG 59.011 50.000 12.11 0.00 46.23 3.79
293 294 3.120649 ACTTTAGCGTTTGCATCGTCTTC 60.121 43.478 12.11 0.00 46.23 2.87
294 295 2.806244 ACTTTAGCGTTTGCATCGTCTT 59.194 40.909 12.11 3.48 46.23 3.01
295 296 2.413837 ACTTTAGCGTTTGCATCGTCT 58.586 42.857 12.11 11.50 46.23 4.18
296 297 2.875080 ACTTTAGCGTTTGCATCGTC 57.125 45.000 12.11 6.09 46.23 4.20
297 298 2.546368 TGAACTTTAGCGTTTGCATCGT 59.454 40.909 12.11 3.92 46.23 3.73
298 299 3.181826 TGAACTTTAGCGTTTGCATCG 57.818 42.857 7.32 7.32 46.23 3.84
299 300 6.237306 GCTTATTGAACTTTAGCGTTTGCATC 60.237 38.462 0.00 0.00 46.23 3.91
300 301 5.572896 GCTTATTGAACTTTAGCGTTTGCAT 59.427 36.000 0.00 0.00 46.23 3.96
301 302 4.915085 GCTTATTGAACTTTAGCGTTTGCA 59.085 37.500 0.00 0.00 46.23 4.08
302 303 4.323602 GGCTTATTGAACTTTAGCGTTTGC 59.676 41.667 0.00 0.00 43.24 3.68
303 304 4.553429 CGGCTTATTGAACTTTAGCGTTTG 59.447 41.667 0.00 0.00 32.74 2.93
304 305 4.453136 TCGGCTTATTGAACTTTAGCGTTT 59.547 37.500 0.00 0.00 32.74 3.60
305 306 3.998341 TCGGCTTATTGAACTTTAGCGTT 59.002 39.130 0.00 0.00 32.74 4.84
306 307 3.592059 TCGGCTTATTGAACTTTAGCGT 58.408 40.909 0.00 0.00 32.74 5.07
307 308 4.518217 CATCGGCTTATTGAACTTTAGCG 58.482 43.478 0.00 0.00 32.74 4.26
308 309 4.201910 TGCATCGGCTTATTGAACTTTAGC 60.202 41.667 0.00 0.00 41.91 3.09
309 310 5.484173 TGCATCGGCTTATTGAACTTTAG 57.516 39.130 0.00 0.00 41.91 1.85
310 311 5.888691 TTGCATCGGCTTATTGAACTTTA 57.111 34.783 0.00 0.00 41.91 1.85
311 312 4.782019 TTGCATCGGCTTATTGAACTTT 57.218 36.364 0.00 0.00 41.91 2.66
312 313 4.989279 ATTGCATCGGCTTATTGAACTT 57.011 36.364 0.00 0.00 41.91 2.66
313 314 4.641989 AGAATTGCATCGGCTTATTGAACT 59.358 37.500 0.00 0.00 41.91 3.01
314 315 4.925068 AGAATTGCATCGGCTTATTGAAC 58.075 39.130 0.00 0.00 41.91 3.18
315 316 4.883585 AGAGAATTGCATCGGCTTATTGAA 59.116 37.500 0.00 0.00 41.91 2.69
316 317 4.274214 CAGAGAATTGCATCGGCTTATTGA 59.726 41.667 0.00 0.00 41.91 2.57
317 318 4.036027 ACAGAGAATTGCATCGGCTTATTG 59.964 41.667 0.00 0.00 41.91 1.90
318 319 4.036027 CACAGAGAATTGCATCGGCTTATT 59.964 41.667 0.00 0.00 41.91 1.40
319 320 3.562973 CACAGAGAATTGCATCGGCTTAT 59.437 43.478 0.00 0.00 41.91 1.73
320 321 2.938451 CACAGAGAATTGCATCGGCTTA 59.062 45.455 0.00 0.00 41.91 3.09
321 322 1.741706 CACAGAGAATTGCATCGGCTT 59.258 47.619 0.00 0.00 41.91 4.35
322 323 1.376543 CACAGAGAATTGCATCGGCT 58.623 50.000 0.00 0.00 41.91 5.52
323 324 0.248377 GCACAGAGAATTGCATCGGC 60.248 55.000 0.00 0.00 38.68 5.54
324 325 0.027194 CGCACAGAGAATTGCATCGG 59.973 55.000 0.00 0.00 38.76 4.18
325 326 1.001624 TCGCACAGAGAATTGCATCG 58.998 50.000 0.00 0.00 38.76 3.84
356 357 5.728351 TTTGTATACTATGGCTTTCACGC 57.272 39.130 4.17 0.00 0.00 5.34
428 429 8.785329 AATCTGGTTTGCTAAAAACTCAAAAA 57.215 26.923 1.42 0.00 33.86 1.94
430 431 9.691362 GATAATCTGGTTTGCTAAAAACTCAAA 57.309 29.630 1.42 0.00 33.86 2.69
431 432 8.303876 GGATAATCTGGTTTGCTAAAAACTCAA 58.696 33.333 1.42 0.00 33.86 3.02
432 433 7.450014 TGGATAATCTGGTTTGCTAAAAACTCA 59.550 33.333 1.42 0.00 33.86 3.41
433 434 7.826690 TGGATAATCTGGTTTGCTAAAAACTC 58.173 34.615 1.42 0.00 33.86 3.01
434 435 7.775053 TGGATAATCTGGTTTGCTAAAAACT 57.225 32.000 1.42 0.00 33.86 2.66
437 438 9.077885 GGATATGGATAATCTGGTTTGCTAAAA 57.922 33.333 0.00 0.00 0.00 1.52
438 439 8.224025 TGGATATGGATAATCTGGTTTGCTAAA 58.776 33.333 0.00 0.00 0.00 1.85
439 440 7.665559 GTGGATATGGATAATCTGGTTTGCTAA 59.334 37.037 0.00 0.00 0.00 3.09
440 441 7.168219 GTGGATATGGATAATCTGGTTTGCTA 58.832 38.462 0.00 0.00 0.00 3.49
441 442 6.006449 GTGGATATGGATAATCTGGTTTGCT 58.994 40.000 0.00 0.00 0.00 3.91
442 443 5.106555 CGTGGATATGGATAATCTGGTTTGC 60.107 44.000 0.00 0.00 0.00 3.68
443 444 6.230472 TCGTGGATATGGATAATCTGGTTTG 58.770 40.000 0.00 0.00 0.00 2.93
444 445 6.433847 TCGTGGATATGGATAATCTGGTTT 57.566 37.500 0.00 0.00 0.00 3.27
445 446 6.627087 ATCGTGGATATGGATAATCTGGTT 57.373 37.500 0.00 0.00 0.00 3.67
446 447 6.627087 AATCGTGGATATGGATAATCTGGT 57.373 37.500 0.00 0.00 0.00 4.00
447 448 7.105588 TGAAATCGTGGATATGGATAATCTGG 58.894 38.462 0.00 0.00 0.00 3.86
448 449 8.728337 ATGAAATCGTGGATATGGATAATCTG 57.272 34.615 0.00 0.00 0.00 2.90
449 450 9.170734 CAATGAAATCGTGGATATGGATAATCT 57.829 33.333 0.00 0.00 0.00 2.40
450 451 8.400947 CCAATGAAATCGTGGATATGGATAATC 58.599 37.037 0.00 0.00 0.00 1.75
451 452 8.108999 TCCAATGAAATCGTGGATATGGATAAT 58.891 33.333 2.43 0.00 29.93 1.28
452 453 7.457561 TCCAATGAAATCGTGGATATGGATAA 58.542 34.615 2.43 0.00 29.93 1.75
453 454 7.014988 TCCAATGAAATCGTGGATATGGATA 57.985 36.000 2.43 0.00 29.93 2.59
454 455 5.879763 TCCAATGAAATCGTGGATATGGAT 58.120 37.500 2.43 0.00 29.93 3.41
455 456 5.303259 TCCAATGAAATCGTGGATATGGA 57.697 39.130 2.43 0.00 32.33 3.41
456 457 7.362056 GGTTATCCAATGAAATCGTGGATATGG 60.362 40.741 18.80 5.60 40.17 2.74
457 458 7.362056 GGGTTATCCAATGAAATCGTGGATATG 60.362 40.741 18.80 0.00 40.17 1.78
458 459 6.659242 GGGTTATCCAATGAAATCGTGGATAT 59.341 38.462 18.80 5.79 40.17 1.63
459 460 6.001460 GGGTTATCCAATGAAATCGTGGATA 58.999 40.000 16.10 16.10 39.73 2.59
460 461 4.827284 GGGTTATCCAATGAAATCGTGGAT 59.173 41.667 17.56 17.56 41.65 3.41
461 462 4.204012 GGGTTATCCAATGAAATCGTGGA 58.796 43.478 7.78 7.78 35.00 4.02
462 463 3.951037 TGGGTTATCCAATGAAATCGTGG 59.049 43.478 0.00 0.00 43.84 4.94
474 475 5.540719 CCTAAAACCTTGTTTGGGTTATCCA 59.459 40.000 0.00 0.00 45.15 3.41
475 476 5.568023 GCCTAAAACCTTGTTTGGGTTATCC 60.568 44.000 0.00 0.00 45.15 2.59
476 477 5.475719 GCCTAAAACCTTGTTTGGGTTATC 58.524 41.667 0.00 0.00 45.15 1.75
477 478 4.021807 CGCCTAAAACCTTGTTTGGGTTAT 60.022 41.667 0.00 0.00 45.15 1.89
478 479 3.318557 CGCCTAAAACCTTGTTTGGGTTA 59.681 43.478 0.00 0.00 45.15 2.85
480 481 1.684450 CGCCTAAAACCTTGTTTGGGT 59.316 47.619 11.12 0.00 40.34 4.51
481 482 1.000394 CCGCCTAAAACCTTGTTTGGG 60.000 52.381 0.00 1.29 40.96 4.12
482 483 1.684450 ACCGCCTAAAACCTTGTTTGG 59.316 47.619 0.00 0.00 0.00 3.28
483 484 3.446310 AACCGCCTAAAACCTTGTTTG 57.554 42.857 0.00 0.00 0.00 2.93
484 485 6.264970 TGTTATAACCGCCTAAAACCTTGTTT 59.735 34.615 13.01 0.00 0.00 2.83
485 486 5.769162 TGTTATAACCGCCTAAAACCTTGTT 59.231 36.000 13.01 0.00 0.00 2.83
486 487 5.315348 TGTTATAACCGCCTAAAACCTTGT 58.685 37.500 13.01 0.00 0.00 3.16
487 488 5.644636 TCTGTTATAACCGCCTAAAACCTTG 59.355 40.000 13.01 0.00 0.00 3.61
488 489 5.807909 TCTGTTATAACCGCCTAAAACCTT 58.192 37.500 13.01 0.00 0.00 3.50
489 490 5.425196 TCTGTTATAACCGCCTAAAACCT 57.575 39.130 13.01 0.00 0.00 3.50
490 491 6.688637 AATCTGTTATAACCGCCTAAAACC 57.311 37.500 13.01 0.00 0.00 3.27
491 492 9.494479 GTAAAATCTGTTATAACCGCCTAAAAC 57.506 33.333 13.01 0.11 0.00 2.43
492 493 8.389603 CGTAAAATCTGTTATAACCGCCTAAAA 58.610 33.333 13.01 0.00 0.00 1.52
493 494 7.548780 ACGTAAAATCTGTTATAACCGCCTAAA 59.451 33.333 13.01 0.00 0.00 1.85
494 495 7.041107 ACGTAAAATCTGTTATAACCGCCTAA 58.959 34.615 13.01 0.00 0.00 2.69
495 496 6.572519 ACGTAAAATCTGTTATAACCGCCTA 58.427 36.000 13.01 0.00 0.00 3.93
496 497 5.422145 ACGTAAAATCTGTTATAACCGCCT 58.578 37.500 13.01 0.00 0.00 5.52
497 498 5.723492 ACGTAAAATCTGTTATAACCGCC 57.277 39.130 13.01 0.00 0.00 6.13
498 499 9.202545 CTTAAACGTAAAATCTGTTATAACCGC 57.797 33.333 13.01 0.00 0.00 5.68
507 508 9.511144 CCAGTTTTTCTTAAACGTAAAATCTGT 57.489 29.630 19.91 0.00 37.78 3.41
508 509 9.511144 ACCAGTTTTTCTTAAACGTAAAATCTG 57.489 29.630 17.13 17.13 38.47 2.90
512 513 9.558648 GAGAACCAGTTTTTCTTAAACGTAAAA 57.441 29.630 0.00 0.00 33.30 1.52
513 514 8.183536 GGAGAACCAGTTTTTCTTAAACGTAAA 58.816 33.333 0.00 0.00 33.30 2.01
514 515 7.336427 TGGAGAACCAGTTTTTCTTAAACGTAA 59.664 33.333 0.00 0.00 41.77 3.18
515 516 6.822676 TGGAGAACCAGTTTTTCTTAAACGTA 59.177 34.615 0.00 0.00 41.77 3.57
516 517 5.648960 TGGAGAACCAGTTTTTCTTAAACGT 59.351 36.000 0.00 0.00 41.77 3.99
517 518 6.126568 TGGAGAACCAGTTTTTCTTAAACG 57.873 37.500 0.00 0.00 41.77 3.60
531 532 0.253610 ACGGTGTTTGTGGAGAACCA 59.746 50.000 0.00 0.00 44.76 3.67
532 533 2.243602 TACGGTGTTTGTGGAGAACC 57.756 50.000 0.00 0.00 0.00 3.62
533 534 2.740447 GGATACGGTGTTTGTGGAGAAC 59.260 50.000 0.00 0.00 0.00 3.01
534 535 2.369203 TGGATACGGTGTTTGTGGAGAA 59.631 45.455 0.00 0.00 42.51 2.87
535 536 1.972075 TGGATACGGTGTTTGTGGAGA 59.028 47.619 0.00 0.00 42.51 3.71
536 537 2.465860 TGGATACGGTGTTTGTGGAG 57.534 50.000 0.00 0.00 42.51 3.86
537 538 2.879646 GTTTGGATACGGTGTTTGTGGA 59.120 45.455 0.00 0.00 42.51 4.02
538 539 2.619177 TGTTTGGATACGGTGTTTGTGG 59.381 45.455 0.00 0.00 42.51 4.17
539 540 3.972950 TGTTTGGATACGGTGTTTGTG 57.027 42.857 0.00 0.00 42.51 3.33
540 541 3.067040 GGTTGTTTGGATACGGTGTTTGT 59.933 43.478 0.00 0.00 42.51 2.83
541 542 3.551250 GGGTTGTTTGGATACGGTGTTTG 60.551 47.826 0.00 0.00 42.51 2.93
542 543 2.624364 GGGTTGTTTGGATACGGTGTTT 59.376 45.455 0.00 0.00 42.51 2.83
543 544 2.232399 GGGTTGTTTGGATACGGTGTT 58.768 47.619 0.00 0.00 42.51 3.32
544 545 1.546099 GGGGTTGTTTGGATACGGTGT 60.546 52.381 0.00 0.00 42.51 4.16
545 546 1.170442 GGGGTTGTTTGGATACGGTG 58.830 55.000 0.00 0.00 42.51 4.94
546 547 1.069775 AGGGGTTGTTTGGATACGGT 58.930 50.000 0.00 0.00 42.51 4.83
547 548 2.209690 AAGGGGTTGTTTGGATACGG 57.790 50.000 0.00 0.00 42.51 4.02
548 549 3.687698 CACTAAGGGGTTGTTTGGATACG 59.312 47.826 0.00 0.00 42.51 3.06
549 550 4.913784 TCACTAAGGGGTTGTTTGGATAC 58.086 43.478 0.00 0.00 0.00 2.24
550 551 5.491078 AGATCACTAAGGGGTTGTTTGGATA 59.509 40.000 0.00 0.00 0.00 2.59
551 552 4.292306 AGATCACTAAGGGGTTGTTTGGAT 59.708 41.667 0.00 0.00 0.00 3.41
552 553 3.655777 AGATCACTAAGGGGTTGTTTGGA 59.344 43.478 0.00 0.00 0.00 3.53
553 554 4.034285 AGATCACTAAGGGGTTGTTTGG 57.966 45.455 0.00 0.00 0.00 3.28
554 555 6.348213 CGTTTAGATCACTAAGGGGTTGTTTG 60.348 42.308 0.00 0.00 39.36 2.93
555 556 5.704053 CGTTTAGATCACTAAGGGGTTGTTT 59.296 40.000 0.00 0.00 39.36 2.83
556 557 5.243207 CGTTTAGATCACTAAGGGGTTGTT 58.757 41.667 0.00 0.00 39.36 2.83
557 558 4.828829 CGTTTAGATCACTAAGGGGTTGT 58.171 43.478 0.00 0.00 39.36 3.32
558 559 3.621715 GCGTTTAGATCACTAAGGGGTTG 59.378 47.826 0.00 0.00 39.36 3.77
559 560 3.518303 AGCGTTTAGATCACTAAGGGGTT 59.482 43.478 0.00 0.00 39.36 4.11
560 561 3.105283 AGCGTTTAGATCACTAAGGGGT 58.895 45.455 0.00 0.00 39.36 4.95
561 562 3.385111 AGAGCGTTTAGATCACTAAGGGG 59.615 47.826 0.00 0.00 39.36 4.79
562 563 4.657436 AGAGCGTTTAGATCACTAAGGG 57.343 45.455 0.00 0.00 39.36 3.95
563 564 8.649973 ATTTAAGAGCGTTTAGATCACTAAGG 57.350 34.615 0.00 0.00 39.36 2.69
644 648 6.569179 ACGCAATGTTTACCTCTATTGTTT 57.431 33.333 0.00 0.00 34.04 2.83
646 650 5.472137 ACAACGCAATGTTTACCTCTATTGT 59.528 36.000 0.00 0.00 39.29 2.71
647 651 5.938322 ACAACGCAATGTTTACCTCTATTG 58.062 37.500 0.00 0.00 39.29 1.90
648 652 6.569179 AACAACGCAATGTTTACCTCTATT 57.431 33.333 0.00 0.00 40.52 1.73
660 664 6.086222 AGCACTTATTAGAAACAACGCAATG 58.914 36.000 0.00 0.00 0.00 2.82
705 709 8.929260 TGAGTATCATTAAAATCATCATGCCT 57.071 30.769 0.00 0.00 42.56 4.75
772 777 4.321156 GGCTTAAATGTGCTTGTCATGTGA 60.321 41.667 0.00 0.00 0.00 3.58
817 822 9.491675 TGCATAAATTGTTTGATCACAAAATCT 57.508 25.926 0.00 0.00 45.65 2.40
827 832 7.966246 TTCTTGCTTGCATAAATTGTTTGAT 57.034 28.000 0.00 0.00 0.00 2.57
829 834 8.336806 TCTTTTCTTGCTTGCATAAATTGTTTG 58.663 29.630 0.00 0.00 0.00 2.93
842 847 6.427547 ACTCTCTTCTCATCTTTTCTTGCTTG 59.572 38.462 0.00 0.00 0.00 4.01
843 848 6.427547 CACTCTCTTCTCATCTTTTCTTGCTT 59.572 38.462 0.00 0.00 0.00 3.91
846 851 6.927936 TGTCACTCTCTTCTCATCTTTTCTTG 59.072 38.462 0.00 0.00 0.00 3.02
856 861 5.525012 CACACAAATTGTCACTCTCTTCTCA 59.475 40.000 0.00 0.00 35.67 3.27
876 881 1.083401 CAAGTCGAGCAACGCACAC 60.083 57.895 0.00 0.00 42.26 3.82
878 883 1.201825 GACAAGTCGAGCAACGCAC 59.798 57.895 0.00 0.00 42.26 5.34
907 912 2.118294 AAAAGCAGCCAGGACCCC 59.882 61.111 0.00 0.00 0.00 4.95
957 968 1.859080 GCTGCTAATTAACCCGACGAG 59.141 52.381 0.00 0.00 0.00 4.18
1011 1022 1.118838 GAGAGATGGGAGTGGGACTG 58.881 60.000 0.00 0.00 0.00 3.51
1028 1039 0.603707 TTGTTGGCGCAGGAGAAGAG 60.604 55.000 10.83 0.00 0.00 2.85
1029 1040 0.884704 GTTGTTGGCGCAGGAGAAGA 60.885 55.000 10.83 0.00 0.00 2.87
1603 1614 0.451783 GGCAAGCGGGTAGACAATTG 59.548 55.000 3.24 3.24 0.00 2.32
1620 1631 1.688735 GCATAAGAATTGGAAGGGGGC 59.311 52.381 0.00 0.00 0.00 5.80
1986 1997 7.015098 TCCAACATTCAAGTATCCAACACAAAT 59.985 33.333 0.00 0.00 0.00 2.32
2050 2061 4.141733 CCAGCAAGAAGGGGAAAAAGAAAA 60.142 41.667 0.00 0.00 0.00 2.29
2096 2107 7.662258 TCAAACGTATGGAAAAGGATGTAAAGA 59.338 33.333 0.00 0.00 0.00 2.52
2103 2114 7.931578 TGTAATCAAACGTATGGAAAAGGAT 57.068 32.000 0.00 0.00 0.00 3.24
2290 2301 2.365582 GCCGATTTTTAAGCCTCCTGA 58.634 47.619 0.00 0.00 0.00 3.86
2292 2303 1.379527 CGCCGATTTTTAAGCCTCCT 58.620 50.000 0.00 0.00 0.00 3.69
2293 2304 0.248498 GCGCCGATTTTTAAGCCTCC 60.248 55.000 0.00 0.00 0.00 4.30
2294 2305 0.248498 GGCGCCGATTTTTAAGCCTC 60.248 55.000 12.58 0.00 41.21 4.70
2381 2399 1.837051 AGATATCGGCGCCTTGGGA 60.837 57.895 26.68 15.03 0.00 4.37
2385 2403 2.031163 GGCAGATATCGGCGCCTT 59.969 61.111 26.68 14.63 41.50 4.35
2422 2440 1.463553 AAAGTGGGCCGGAAAGCAAG 61.464 55.000 5.05 0.00 0.00 4.01
2423 2441 1.456705 AAAGTGGGCCGGAAAGCAA 60.457 52.632 5.05 0.00 0.00 3.91
2424 2442 1.901464 GAAAGTGGGCCGGAAAGCA 60.901 57.895 5.05 0.00 0.00 3.91
2425 2443 2.962569 GAAAGTGGGCCGGAAAGC 59.037 61.111 5.05 0.00 0.00 3.51
2426 2444 2.332654 CCGAAAGTGGGCCGGAAAG 61.333 63.158 5.05 0.00 45.58 2.62
2427 2445 2.281900 CCGAAAGTGGGCCGGAAA 60.282 61.111 5.05 0.00 45.58 3.13
2437 2455 0.109919 GCCGATTTTTCGCCGAAAGT 60.110 50.000 12.50 5.86 32.93 2.66
2495 2534 1.120147 CTTTTGTCGAATTCGCGCCG 61.120 55.000 22.90 0.00 39.60 6.46
2592 2631 4.381411 CAGGAAAGAGAGAAGGTTTCGTT 58.619 43.478 0.00 0.00 32.03 3.85
2593 2632 3.244249 CCAGGAAAGAGAGAAGGTTTCGT 60.244 47.826 0.00 0.00 32.03 3.85
2636 2675 4.404098 CACCCACCGCCCAGTACC 62.404 72.222 0.00 0.00 0.00 3.34
2637 2676 4.404098 CCACCCACCGCCCAGTAC 62.404 72.222 0.00 0.00 0.00 2.73
2657 2696 4.820744 CCACCCTGCCAATCCCGG 62.821 72.222 0.00 0.00 0.00 5.73
2658 2697 4.047125 ACCACCCTGCCAATCCCG 62.047 66.667 0.00 0.00 0.00 5.14
2659 2698 2.362889 CACCACCCTGCCAATCCC 60.363 66.667 0.00 0.00 0.00 3.85
2660 2699 2.362889 CCACCACCCTGCCAATCC 60.363 66.667 0.00 0.00 0.00 3.01
2661 2700 3.070576 GCCACCACCCTGCCAATC 61.071 66.667 0.00 0.00 0.00 2.67
2662 2701 4.702274 GGCCACCACCCTGCCAAT 62.702 66.667 0.00 0.00 44.70 3.16
2695 2734 2.325393 AATCGTCCAGATTCGCCCCC 62.325 60.000 0.00 0.00 45.95 5.40
2696 2735 1.146263 AATCGTCCAGATTCGCCCC 59.854 57.895 0.00 0.00 45.95 5.80
2697 2736 1.776034 GCAATCGTCCAGATTCGCCC 61.776 60.000 0.00 0.00 45.95 6.13
2698 2737 0.811616 AGCAATCGTCCAGATTCGCC 60.812 55.000 9.74 0.00 45.95 5.54
2699 2738 1.009829 AAGCAATCGTCCAGATTCGC 58.990 50.000 0.00 6.97 45.95 4.70
2700 2739 3.865745 AGTAAAGCAATCGTCCAGATTCG 59.134 43.478 0.00 0.00 45.95 3.34
2701 2740 5.803020 AAGTAAAGCAATCGTCCAGATTC 57.197 39.130 0.00 0.00 45.95 2.52
2703 2742 5.705441 TGAAAAGTAAAGCAATCGTCCAGAT 59.295 36.000 0.00 0.00 42.43 2.90
2704 2743 5.049680 GTGAAAAGTAAAGCAATCGTCCAGA 60.050 40.000 0.00 0.00 0.00 3.86
2705 2744 5.147162 GTGAAAAGTAAAGCAATCGTCCAG 58.853 41.667 0.00 0.00 0.00 3.86
2706 2745 4.319190 CGTGAAAAGTAAAGCAATCGTCCA 60.319 41.667 0.00 0.00 0.00 4.02
2707 2746 4.084223 TCGTGAAAAGTAAAGCAATCGTCC 60.084 41.667 0.00 0.00 0.00 4.79
2708 2747 5.013861 TCGTGAAAAGTAAAGCAATCGTC 57.986 39.130 0.00 0.00 0.00 4.20
2709 2748 5.607119 ATCGTGAAAAGTAAAGCAATCGT 57.393 34.783 0.00 0.00 0.00 3.73
2710 2749 6.678663 CACTATCGTGAAAAGTAAAGCAATCG 59.321 38.462 0.00 0.00 43.97 3.34
2711 2750 7.478667 CACACTATCGTGAAAAGTAAAGCAATC 59.521 37.037 4.10 0.00 43.97 2.67
2712 2751 7.298122 CACACTATCGTGAAAAGTAAAGCAAT 58.702 34.615 4.10 0.00 43.97 3.56
2713 2752 6.293190 CCACACTATCGTGAAAAGTAAAGCAA 60.293 38.462 4.10 0.00 43.97 3.91
2714 2753 5.178623 CCACACTATCGTGAAAAGTAAAGCA 59.821 40.000 4.10 0.00 43.97 3.91
2715 2754 5.618561 CCACACTATCGTGAAAAGTAAAGC 58.381 41.667 4.10 0.00 43.97 3.51
2716 2755 5.390567 GGCCACACTATCGTGAAAAGTAAAG 60.391 44.000 4.10 0.00 43.97 1.85
2717 2756 4.453136 GGCCACACTATCGTGAAAAGTAAA 59.547 41.667 4.10 0.00 43.97 2.01
2718 2757 3.998341 GGCCACACTATCGTGAAAAGTAA 59.002 43.478 4.10 0.00 43.97 2.24
2719 2758 3.259876 AGGCCACACTATCGTGAAAAGTA 59.740 43.478 5.01 0.00 43.97 2.24
2720 2759 2.038557 AGGCCACACTATCGTGAAAAGT 59.961 45.455 5.01 0.00 43.97 2.66
2721 2760 2.699954 AGGCCACACTATCGTGAAAAG 58.300 47.619 5.01 0.00 43.97 2.27
2722 2761 2.851263 AGGCCACACTATCGTGAAAA 57.149 45.000 5.01 0.00 43.97 2.29
2723 2762 2.167693 CCTAGGCCACACTATCGTGAAA 59.832 50.000 5.01 0.00 43.97 2.69
2724 2763 1.754803 CCTAGGCCACACTATCGTGAA 59.245 52.381 5.01 0.00 43.97 3.18
2725 2764 1.399714 CCTAGGCCACACTATCGTGA 58.600 55.000 5.01 0.00 43.97 4.35
2726 2765 0.249489 GCCTAGGCCACACTATCGTG 60.249 60.000 24.19 0.00 40.07 4.35
2727 2766 1.735376 CGCCTAGGCCACACTATCGT 61.735 60.000 28.09 0.00 37.98 3.73
2728 2767 1.007271 CGCCTAGGCCACACTATCG 60.007 63.158 28.09 6.65 37.98 2.92
2729 2768 0.249489 CACGCCTAGGCCACACTATC 60.249 60.000 28.09 0.00 37.98 2.08
2730 2769 0.976073 ACACGCCTAGGCCACACTAT 60.976 55.000 28.09 3.88 37.98 2.12
2731 2770 1.189524 AACACGCCTAGGCCACACTA 61.190 55.000 28.09 0.00 37.98 2.74
2732 2771 2.052047 AAACACGCCTAGGCCACACT 62.052 55.000 28.09 7.33 37.98 3.55
2733 2772 1.170290 AAAACACGCCTAGGCCACAC 61.170 55.000 28.09 0.17 37.98 3.82
2734 2773 0.887387 GAAAACACGCCTAGGCCACA 60.887 55.000 28.09 0.00 37.98 4.17
2735 2774 1.583495 GGAAAACACGCCTAGGCCAC 61.583 60.000 28.09 10.80 37.98 5.01
2736 2775 1.302993 GGAAAACACGCCTAGGCCA 60.303 57.895 28.09 0.00 37.98 5.36
2737 2776 2.044555 GGGAAAACACGCCTAGGCC 61.045 63.158 28.09 11.67 37.98 5.19
2738 2777 2.044555 GGGGAAAACACGCCTAGGC 61.045 63.158 24.75 24.75 39.35 3.93
2739 2778 4.313819 GGGGAAAACACGCCTAGG 57.686 61.111 3.67 3.67 39.35 3.02
2743 2782 2.622962 CGGAAGGGGAAAACACGCC 61.623 63.158 0.00 0.00 42.13 5.68
2744 2783 2.951458 CGGAAGGGGAAAACACGC 59.049 61.111 0.00 0.00 0.00 5.34
2745 2784 2.622962 GGCGGAAGGGGAAAACACG 61.623 63.158 0.00 0.00 0.00 4.49
2746 2785 2.622962 CGGCGGAAGGGGAAAACAC 61.623 63.158 0.00 0.00 0.00 3.32
2747 2786 2.281900 CGGCGGAAGGGGAAAACA 60.282 61.111 0.00 0.00 0.00 2.83
2748 2787 3.060000 CCGGCGGAAGGGGAAAAC 61.060 66.667 24.41 0.00 0.00 2.43
2749 2788 3.250734 TCCGGCGGAAGGGGAAAA 61.251 61.111 29.11 0.00 0.00 2.29
2750 2789 3.712907 CTCCGGCGGAAGGGGAAA 61.713 66.667 30.59 4.61 0.00 3.13
2791 2830 3.406595 GATCCCAGGCCGAACCCAG 62.407 68.421 0.00 0.00 40.58 4.45
2792 2831 3.407967 GATCCCAGGCCGAACCCA 61.408 66.667 0.00 0.00 40.58 4.51
2793 2832 4.547367 CGATCCCAGGCCGAACCC 62.547 72.222 0.00 0.00 40.58 4.11
2806 2845 3.065567 TTTTTGGGCCCGGCGATC 61.066 61.111 19.37 0.00 0.00 3.69
2807 2846 3.378602 GTTTTTGGGCCCGGCGAT 61.379 61.111 19.37 0.00 0.00 4.58
2817 2856 4.050934 GGCTCGGCCCGTTTTTGG 62.051 66.667 1.63 0.00 44.06 3.28
2835 2874 2.818274 AAGACGCCGAAATCCGCC 60.818 61.111 0.00 0.00 36.84 6.13
2836 2875 2.399611 CAAGACGCCGAAATCCGC 59.600 61.111 0.00 0.00 36.84 5.54
2837 2876 2.461110 CCCAAGACGCCGAAATCCG 61.461 63.158 0.00 0.00 38.18 4.18
2838 2877 2.112815 CCCCAAGACGCCGAAATCC 61.113 63.158 0.00 0.00 0.00 3.01
2839 2878 2.112815 CCCCCAAGACGCCGAAATC 61.113 63.158 0.00 0.00 0.00 2.17
2840 2879 2.045340 CCCCCAAGACGCCGAAAT 60.045 61.111 0.00 0.00 0.00 2.17
2881 2920 4.753877 GACCTTTTTCGCGCCGGC 62.754 66.667 19.07 19.07 0.00 6.13
2882 2921 4.439472 CGACCTTTTTCGCGCCGG 62.439 66.667 0.00 0.00 31.03 6.13
2917 2956 4.671569 CATCTCTAGCCGCGCCCC 62.672 72.222 0.00 0.00 0.00 5.80
2919 2958 4.292178 AGCATCTCTAGCCGCGCC 62.292 66.667 0.00 0.00 0.00 6.53
2920 2959 2.732843 GAGCATCTCTAGCCGCGC 60.733 66.667 0.00 0.00 0.00 6.86
2933 2972 3.647590 TCATATCCCAGTGCATTAGAGCA 59.352 43.478 0.00 0.00 43.35 4.26
2934 2973 4.277515 TCATATCCCAGTGCATTAGAGC 57.722 45.455 0.00 0.00 0.00 4.09
2935 2974 6.528321 TCTTTCATATCCCAGTGCATTAGAG 58.472 40.000 0.00 0.00 0.00 2.43
2936 2975 6.499106 TCTTTCATATCCCAGTGCATTAGA 57.501 37.500 0.00 0.00 0.00 2.10
2937 2976 6.150641 CCATCTTTCATATCCCAGTGCATTAG 59.849 42.308 0.00 0.00 0.00 1.73
2945 2984 3.513909 TGCCCATCTTTCATATCCCAG 57.486 47.619 0.00 0.00 0.00 4.45
3471 3569 2.019807 TTCTCTCTGGGTTTACGGGT 57.980 50.000 0.00 0.00 0.00 5.28
3512 3610 1.126488 TTCCCTATCCTGCTCAGCTG 58.874 55.000 7.63 7.63 0.00 4.24
3875 3973 5.710099 TGGAATGTTAGGTTTGAGATCAACC 59.290 40.000 5.49 5.49 35.28 3.77
4280 4443 5.473504 ACCAGAAATTATTGACCACTGTGTC 59.526 40.000 7.08 5.39 35.77 3.67
4416 4580 9.866655 AATCCTCCAAAGCATAGATACATTTTA 57.133 29.630 0.00 0.00 0.00 1.52
4810 4986 3.136123 CCCCTGCGTTGCCTGATG 61.136 66.667 0.00 0.00 0.00 3.07
4996 5172 3.889196 TCAGTCGCCAACACAATAAAC 57.111 42.857 0.00 0.00 0.00 2.01
5844 6023 2.912771 CCACTGTAATGGACGGCAATA 58.087 47.619 0.00 0.00 43.02 1.90
5991 6175 6.426633 TCAAATGAGCTTCGTCAATTTACTGA 59.573 34.615 0.00 0.00 0.00 3.41
6007 6191 8.314143 TCAAATCCTTCAAAATTCAAATGAGC 57.686 30.769 0.00 0.00 0.00 4.26
6020 6204 7.011295 GCAATCAAACAAACTCAAATCCTTCAA 59.989 33.333 0.00 0.00 0.00 2.69
6113 6300 3.512329 TGGTGCTCCGTTGTAATCTCTTA 59.488 43.478 0.00 0.00 36.30 2.10
6184 6381 6.157645 AGGGAGATGAGTTCACTGATATTGTT 59.842 38.462 0.00 0.00 0.00 2.83
6281 6478 9.722056 CAAAGAAATAATAGGGTCTTTCATTCG 57.278 33.333 0.00 0.00 38.05 3.34
6328 6525 1.651138 CGACTCTGTTCGTCATGCTTC 59.349 52.381 0.00 0.00 34.16 3.86
6342 6539 2.289756 GGAAAGAAAGGGCTTCGACTCT 60.290 50.000 0.00 0.00 39.22 3.24
6375 6572 1.352156 GGACTAGTCGGCGCAAACAG 61.352 60.000 16.56 9.11 0.00 3.16
6378 6575 0.459585 GATGGACTAGTCGGCGCAAA 60.460 55.000 16.56 0.00 0.00 3.68
6396 6593 1.833630 CAGGACAGGCTACAGGATTGA 59.166 52.381 0.00 0.00 0.00 2.57
6442 6639 1.376037 GCTTCTCCAAGGTGGACGG 60.376 63.158 0.00 0.00 42.67 4.79
6443 6640 0.951040 GTGCTTCTCCAAGGTGGACG 60.951 60.000 0.00 0.00 42.67 4.79
6514 6711 1.187087 GATGAGGAGGAAGACACGGT 58.813 55.000 0.00 0.00 0.00 4.83
6515 6712 1.134965 GTGATGAGGAGGAAGACACGG 60.135 57.143 0.00 0.00 0.00 4.94
6516 6713 1.546029 TGTGATGAGGAGGAAGACACG 59.454 52.381 0.00 0.00 0.00 4.49
6560 6758 0.963355 GCTCGGGCATGGGTTACAAA 60.963 55.000 0.00 0.00 38.54 2.83
6575 6773 2.492090 CCTCGGACAGAAGGCTCG 59.508 66.667 0.00 0.00 0.00 5.03
6593 6791 6.279513 TGGCAATTTAATACAGACTTTGGG 57.720 37.500 0.00 0.00 0.00 4.12
6608 6806 7.575343 GCAAAATATTCATGTGGTTGGCAATTT 60.575 33.333 1.92 0.00 0.00 1.82
6612 6810 4.252073 GCAAAATATTCATGTGGTTGGCA 58.748 39.130 0.00 0.00 0.00 4.92
6669 6867 1.140312 GGATCCTATTCCAGCCCACA 58.860 55.000 3.84 0.00 35.72 4.17
6732 6930 0.112995 AGGCTTGGAATGCTGTTGGA 59.887 50.000 0.00 0.00 37.15 3.53
6751 6949 5.789643 GCCAATGAAGATAAGGCCATTTA 57.210 39.130 5.01 0.00 39.42 1.40
6783 6981 0.392729 AGCTGCTGATTGAGACTGGC 60.393 55.000 0.00 0.00 0.00 4.85
6784 6982 1.654317 GAGCTGCTGATTGAGACTGG 58.346 55.000 7.01 0.00 0.00 4.00



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.