Multiple sequence alignment - TraesCS6A01G190700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G190700 chr6A 100.000 4178 0 0 1 4178 255178726 255182903 0.000000e+00 7716.0
1 TraesCS6A01G190700 chr6A 92.988 328 19 2 162 487 474329070 474328745 3.780000e-130 475.0
2 TraesCS6A01G190700 chr6A 100.000 29 0 0 4150 4178 15391425 15391453 2.000000e-03 54.7
3 TraesCS6A01G190700 chr6D 97.426 3691 56 13 487 4155 199213447 199209774 0.000000e+00 6253.0
4 TraesCS6A01G190700 chr6D 97.297 37 0 1 134 169 199213477 199213441 1.250000e-05 62.1
5 TraesCS6A01G190700 chr6B 97.218 2552 51 6 1018 3554 320735149 320732603 0.000000e+00 4301.0
6 TraesCS6A01G190700 chr6B 94.924 591 22 5 3567 4153 320730036 320729450 0.000000e+00 918.0
7 TraesCS6A01G190700 chr6B 94.821 251 7 2 610 859 320735806 320735561 1.820000e-103 387.0
8 TraesCS6A01G190700 chr6B 93.939 132 7 1 487 618 320756667 320756537 9.160000e-47 198.0
9 TraesCS6A01G190700 chr6B 93.478 92 6 0 3514 3605 13827523 13827614 2.030000e-28 137.0
10 TraesCS6A01G190700 chr5A 92.988 328 19 2 164 489 374886162 374885837 3.780000e-130 475.0
11 TraesCS6A01G190700 chr5A 92.683 328 20 2 164 489 228892577 228892252 1.760000e-128 470.0
12 TraesCS6A01G190700 chr7B 93.458 321 16 3 166 484 435675634 435675951 4.890000e-129 472.0
13 TraesCS6A01G190700 chr7B 92.683 328 20 2 164 489 658058608 658058933 1.760000e-128 470.0
14 TraesCS6A01G190700 chr3D 91.940 335 23 2 162 494 210410144 210410476 2.270000e-127 466.0
15 TraesCS6A01G190700 chr5B 92.378 328 22 2 164 489 31873790 31874116 8.180000e-127 464.0
16 TraesCS6A01G190700 chr5B 92.378 328 20 3 169 494 108838162 108838486 2.940000e-126 462.0
17 TraesCS6A01G190700 chr5B 92.097 329 22 2 163 489 523411953 523411627 1.060000e-125 460.0
18 TraesCS6A01G190700 chr5B 95.506 89 4 0 3514 3602 62940320 62940408 4.350000e-30 143.0
19 TraesCS6A01G190700 chr3B 96.552 87 3 0 3517 3603 10622597 10622511 1.210000e-30 145.0
20 TraesCS6A01G190700 chr2B 94.565 92 4 1 3513 3604 166044571 166044481 1.570000e-29 141.0
21 TraesCS6A01G190700 chr2B 95.455 88 4 0 3517 3604 536806588 536806675 1.570000e-29 141.0
22 TraesCS6A01G190700 chr2D 92.708 96 7 0 3506 3601 433984747 433984842 5.630000e-29 139.0
23 TraesCS6A01G190700 chr2D 93.407 91 6 0 3513 3603 612817350 612817260 7.290000e-28 135.0
24 TraesCS6A01G190700 chr1A 98.684 76 1 0 63 138 554233595 554233670 7.290000e-28 135.0
25 TraesCS6A01G190700 chr7D 88.889 108 9 3 3515 3622 599073912 599073808 3.390000e-26 130.0
26 TraesCS6A01G190700 chr3A 97.368 76 2 0 63 138 555741999 555741924 3.390000e-26 130.0
27 TraesCS6A01G190700 chr3A 97.368 76 2 0 63 138 555761980 555761905 3.390000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G190700 chr6A 255178726 255182903 4177 False 7716.000000 7716 100.000000 1 4178 1 chr6A.!!$F2 4177
1 TraesCS6A01G190700 chr6D 199209774 199213477 3703 True 3157.550000 6253 97.361500 134 4155 2 chr6D.!!$R1 4021
2 TraesCS6A01G190700 chr6B 320729450 320735806 6356 True 1868.666667 4301 95.654333 610 4153 3 chr6B.!!$R2 3543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
264 265 0.034186 CTCCCCAATGCAAGCTACCA 60.034 55.0 0.00 0.0 0.0 3.25 F
384 385 0.034896 TCTCTTCAAACACCCGCCTC 59.965 55.0 0.00 0.0 0.0 4.70 F
461 462 0.040058 TGGCATCCAAAGCATCACCT 59.960 50.0 0.00 0.0 0.0 4.00 F
881 897 0.177373 CCCTCCACCTAACCTAACGC 59.823 60.0 0.00 0.0 0.0 4.84 F
975 991 0.180171 CTCTCTCTCTCTCTCGGCCA 59.820 60.0 2.24 0.0 0.0 5.36 F
2883 3149 0.108424 AGAATGCAGTGTCCGCTCTC 60.108 55.0 0.00 0.0 0.0 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1653 1919 1.100463 TTTCAGCTTGGCAAGACGCA 61.100 50.000 30.45 7.95 45.17 5.24 R
1656 1922 1.806542 TCGATTTCAGCTTGGCAAGAC 59.193 47.619 30.45 20.20 0.00 3.01 R
2178 2444 2.603075 TCCTGGCTGTGGCTTTATTT 57.397 45.000 0.00 0.00 38.73 1.40 R
2883 3149 1.399855 CCACGGCGACATATCTCGTAG 60.400 57.143 16.62 0.00 35.99 3.51 R
2979 3245 0.601576 TCTTCTTGGCGCGCTTTGTA 60.602 50.000 32.29 12.97 0.00 2.41 R
4158 6992 0.314302 ACACTCTTCACCGGACGAAG 59.686 55.000 23.86 23.86 41.05 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 5.917462 ACTAAAGTTAGTACAACGTTGGGT 58.083 37.500 30.34 17.04 41.92 4.51
39 40 6.348498 ACTAAAGTTAGTACAACGTTGGGTT 58.652 36.000 30.34 17.36 41.92 4.11
40 41 7.496747 ACTAAAGTTAGTACAACGTTGGGTTA 58.503 34.615 30.34 16.42 41.92 2.85
41 42 8.150296 ACTAAAGTTAGTACAACGTTGGGTTAT 58.850 33.333 30.34 12.93 41.92 1.89
42 43 7.425577 AAAGTTAGTACAACGTTGGGTTATC 57.574 36.000 30.34 16.89 36.49 1.75
43 44 6.350629 AGTTAGTACAACGTTGGGTTATCT 57.649 37.500 30.34 18.47 36.49 1.98
44 45 7.466746 AGTTAGTACAACGTTGGGTTATCTA 57.533 36.000 30.34 18.30 36.49 1.98
45 46 8.071177 AGTTAGTACAACGTTGGGTTATCTAT 57.929 34.615 30.34 10.06 36.49 1.98
46 47 8.534496 AGTTAGTACAACGTTGGGTTATCTATT 58.466 33.333 30.34 12.03 36.49 1.73
47 48 9.154847 GTTAGTACAACGTTGGGTTATCTATTT 57.845 33.333 30.34 8.84 36.49 1.40
48 49 9.723601 TTAGTACAACGTTGGGTTATCTATTTT 57.276 29.630 30.34 8.65 36.49 1.82
49 50 8.036273 AGTACAACGTTGGGTTATCTATTTTG 57.964 34.615 30.34 2.16 36.49 2.44
50 51 6.262193 ACAACGTTGGGTTATCTATTTTGG 57.738 37.500 30.34 1.09 36.49 3.28
51 52 6.005198 ACAACGTTGGGTTATCTATTTTGGA 58.995 36.000 30.34 0.00 36.49 3.53
52 53 6.490721 ACAACGTTGGGTTATCTATTTTGGAA 59.509 34.615 30.34 0.00 36.49 3.53
53 54 6.505044 ACGTTGGGTTATCTATTTTGGAAC 57.495 37.500 0.00 0.00 0.00 3.62
54 55 6.005198 ACGTTGGGTTATCTATTTTGGAACA 58.995 36.000 0.00 0.00 0.00 3.18
55 56 6.150474 ACGTTGGGTTATCTATTTTGGAACAG 59.850 38.462 0.00 0.00 42.39 3.16
56 57 6.373216 CGTTGGGTTATCTATTTTGGAACAGA 59.627 38.462 0.00 0.00 42.39 3.41
57 58 7.414098 CGTTGGGTTATCTATTTTGGAACAGAG 60.414 40.741 0.00 0.00 42.39 3.35
58 59 7.265599 TGGGTTATCTATTTTGGAACAGAGA 57.734 36.000 0.00 0.00 42.39 3.10
59 60 7.695055 TGGGTTATCTATTTTGGAACAGAGAA 58.305 34.615 0.00 0.00 42.39 2.87
60 61 8.167392 TGGGTTATCTATTTTGGAACAGAGAAA 58.833 33.333 0.00 0.00 42.39 2.52
61 62 8.678199 GGGTTATCTATTTTGGAACAGAGAAAG 58.322 37.037 0.00 0.00 42.39 2.62
62 63 9.232473 GGTTATCTATTTTGGAACAGAGAAAGT 57.768 33.333 0.00 0.00 42.39 2.66
83 84 9.255304 GAAAGTATTTATCTGTGACTCATCTCC 57.745 37.037 0.00 0.00 39.27 3.71
84 85 8.546083 AAGTATTTATCTGTGACTCATCTCCT 57.454 34.615 0.00 0.00 0.00 3.69
85 86 9.647918 AAGTATTTATCTGTGACTCATCTCCTA 57.352 33.333 0.00 0.00 0.00 2.94
86 87 9.073475 AGTATTTATCTGTGACTCATCTCCTAC 57.927 37.037 0.00 0.00 0.00 3.18
87 88 9.073475 GTATTTATCTGTGACTCATCTCCTACT 57.927 37.037 0.00 0.00 0.00 2.57
88 89 7.575414 TTTATCTGTGACTCATCTCCTACTC 57.425 40.000 0.00 0.00 0.00 2.59
89 90 3.536570 TCTGTGACTCATCTCCTACTCG 58.463 50.000 0.00 0.00 0.00 4.18
90 91 2.017782 TGTGACTCATCTCCTACTCGC 58.982 52.381 0.00 0.00 0.00 5.03
91 92 1.335496 GTGACTCATCTCCTACTCGCC 59.665 57.143 0.00 0.00 0.00 5.54
92 93 1.064685 TGACTCATCTCCTACTCGCCA 60.065 52.381 0.00 0.00 0.00 5.69
93 94 2.235016 GACTCATCTCCTACTCGCCAT 58.765 52.381 0.00 0.00 0.00 4.40
94 95 3.181443 TGACTCATCTCCTACTCGCCATA 60.181 47.826 0.00 0.00 0.00 2.74
95 96 4.013728 GACTCATCTCCTACTCGCCATAT 58.986 47.826 0.00 0.00 0.00 1.78
96 97 5.180810 ACTCATCTCCTACTCGCCATATA 57.819 43.478 0.00 0.00 0.00 0.86
97 98 5.761205 ACTCATCTCCTACTCGCCATATAT 58.239 41.667 0.00 0.00 0.00 0.86
98 99 6.191315 ACTCATCTCCTACTCGCCATATATT 58.809 40.000 0.00 0.00 0.00 1.28
99 100 6.320164 ACTCATCTCCTACTCGCCATATATTC 59.680 42.308 0.00 0.00 0.00 1.75
100 101 5.594725 TCATCTCCTACTCGCCATATATTCC 59.405 44.000 0.00 0.00 0.00 3.01
101 102 4.279145 TCTCCTACTCGCCATATATTCCC 58.721 47.826 0.00 0.00 0.00 3.97
102 103 4.017407 TCTCCTACTCGCCATATATTCCCT 60.017 45.833 0.00 0.00 0.00 4.20
103 104 4.279145 TCCTACTCGCCATATATTCCCTC 58.721 47.826 0.00 0.00 0.00 4.30
104 105 4.017407 TCCTACTCGCCATATATTCCCTCT 60.017 45.833 0.00 0.00 0.00 3.69
105 106 4.339814 CCTACTCGCCATATATTCCCTCTC 59.660 50.000 0.00 0.00 0.00 3.20
106 107 4.054359 ACTCGCCATATATTCCCTCTCT 57.946 45.455 0.00 0.00 0.00 3.10
107 108 4.421131 ACTCGCCATATATTCCCTCTCTT 58.579 43.478 0.00 0.00 0.00 2.85
108 109 4.221703 ACTCGCCATATATTCCCTCTCTTG 59.778 45.833 0.00 0.00 0.00 3.02
109 110 4.416516 TCGCCATATATTCCCTCTCTTGA 58.583 43.478 0.00 0.00 0.00 3.02
110 111 4.838423 TCGCCATATATTCCCTCTCTTGAA 59.162 41.667 0.00 0.00 0.00 2.69
111 112 5.306937 TCGCCATATATTCCCTCTCTTGAAA 59.693 40.000 0.00 0.00 0.00 2.69
112 113 5.641209 CGCCATATATTCCCTCTCTTGAAAG 59.359 44.000 0.00 0.00 0.00 2.62
113 114 6.538263 GCCATATATTCCCTCTCTTGAAAGT 58.462 40.000 0.00 0.00 0.00 2.66
114 115 7.001073 GCCATATATTCCCTCTCTTGAAAGTT 58.999 38.462 0.00 0.00 0.00 2.66
115 116 7.503902 GCCATATATTCCCTCTCTTGAAAGTTT 59.496 37.037 0.00 0.00 0.00 2.66
116 117 8.844244 CCATATATTCCCTCTCTTGAAAGTTTG 58.156 37.037 0.00 0.00 0.00 2.93
117 118 9.618890 CATATATTCCCTCTCTTGAAAGTTTGA 57.381 33.333 0.00 0.00 0.00 2.69
120 121 6.639632 TTCCCTCTCTTGAAAGTTTGAATG 57.360 37.500 0.00 0.00 0.00 2.67
121 122 4.520492 TCCCTCTCTTGAAAGTTTGAATGC 59.480 41.667 0.00 0.00 0.00 3.56
122 123 4.321527 CCCTCTCTTGAAAGTTTGAATGCC 60.322 45.833 0.00 0.00 0.00 4.40
123 124 4.279169 CCTCTCTTGAAAGTTTGAATGCCA 59.721 41.667 0.00 0.00 0.00 4.92
124 125 5.047519 CCTCTCTTGAAAGTTTGAATGCCAT 60.048 40.000 0.00 0.00 0.00 4.40
125 126 6.151648 CCTCTCTTGAAAGTTTGAATGCCATA 59.848 38.462 0.00 0.00 0.00 2.74
126 127 6.913170 TCTCTTGAAAGTTTGAATGCCATAC 58.087 36.000 0.00 0.00 0.00 2.39
127 128 6.024552 TCTTGAAAGTTTGAATGCCATACC 57.975 37.500 0.00 0.00 0.00 2.73
128 129 5.538053 TCTTGAAAGTTTGAATGCCATACCA 59.462 36.000 0.00 0.00 0.00 3.25
129 130 5.798125 TGAAAGTTTGAATGCCATACCAA 57.202 34.783 0.00 0.00 0.00 3.67
130 131 6.166984 TGAAAGTTTGAATGCCATACCAAA 57.833 33.333 0.00 2.28 0.00 3.28
131 132 6.222389 TGAAAGTTTGAATGCCATACCAAAG 58.778 36.000 0.00 0.00 0.00 2.77
132 133 6.041409 TGAAAGTTTGAATGCCATACCAAAGA 59.959 34.615 0.00 0.00 0.00 2.52
169 170 6.371809 TGTGACGAATGAATTAATAAGGGC 57.628 37.500 0.00 0.00 0.00 5.19
170 171 5.883115 TGTGACGAATGAATTAATAAGGGCA 59.117 36.000 0.00 0.00 0.00 5.36
171 172 6.545666 TGTGACGAATGAATTAATAAGGGCAT 59.454 34.615 0.00 0.00 0.00 4.40
172 173 6.857964 GTGACGAATGAATTAATAAGGGCATG 59.142 38.462 0.00 0.00 0.00 4.06
173 174 6.545666 TGACGAATGAATTAATAAGGGCATGT 59.454 34.615 0.00 0.00 0.00 3.21
174 175 7.717436 TGACGAATGAATTAATAAGGGCATGTA 59.283 33.333 0.00 0.00 0.00 2.29
175 176 7.871853 ACGAATGAATTAATAAGGGCATGTAC 58.128 34.615 0.00 0.00 0.00 2.90
176 177 7.500892 ACGAATGAATTAATAAGGGCATGTACA 59.499 33.333 0.00 0.00 0.00 2.90
177 178 8.349245 CGAATGAATTAATAAGGGCATGTACAA 58.651 33.333 0.00 0.00 0.00 2.41
179 180 9.985730 AATGAATTAATAAGGGCATGTACAATG 57.014 29.630 0.00 0.12 0.00 2.82
180 181 7.950512 TGAATTAATAAGGGCATGTACAATGG 58.049 34.615 0.00 0.00 0.00 3.16
181 182 7.563188 TGAATTAATAAGGGCATGTACAATGGT 59.437 33.333 0.00 0.00 0.00 3.55
182 183 6.707440 TTAATAAGGGCATGTACAATGGTG 57.293 37.500 0.00 0.00 0.00 4.17
183 184 1.851304 AAGGGCATGTACAATGGTGG 58.149 50.000 0.00 0.00 0.00 4.61
184 185 0.684153 AGGGCATGTACAATGGTGGC 60.684 55.000 11.25 11.25 36.52 5.01
185 186 0.969917 GGGCATGTACAATGGTGGCA 60.970 55.000 18.87 0.00 38.72 4.92
186 187 1.113788 GGCATGTACAATGGTGGCAT 58.886 50.000 14.01 0.00 37.14 4.40
187 188 2.305928 GGCATGTACAATGGTGGCATA 58.694 47.619 14.01 0.00 37.14 3.14
188 189 2.892852 GGCATGTACAATGGTGGCATAT 59.107 45.455 14.01 0.00 37.14 1.78
189 190 3.305539 GGCATGTACAATGGTGGCATATG 60.306 47.826 14.01 0.00 37.14 1.78
190 191 3.305539 GCATGTACAATGGTGGCATATGG 60.306 47.826 0.00 0.00 0.00 2.74
191 192 3.660970 TGTACAATGGTGGCATATGGT 57.339 42.857 4.56 0.00 0.00 3.55
192 193 3.974719 TGTACAATGGTGGCATATGGTT 58.025 40.909 4.56 0.00 0.00 3.67
193 194 5.117406 TGTACAATGGTGGCATATGGTTA 57.883 39.130 4.56 0.00 0.00 2.85
194 195 4.884744 TGTACAATGGTGGCATATGGTTAC 59.115 41.667 4.56 0.00 0.00 2.50
195 196 3.974719 ACAATGGTGGCATATGGTTACA 58.025 40.909 4.56 0.00 0.00 2.41
196 197 4.545678 ACAATGGTGGCATATGGTTACAT 58.454 39.130 4.56 0.00 41.13 2.29
197 198 5.700183 ACAATGGTGGCATATGGTTACATA 58.300 37.500 4.56 0.00 43.31 2.29
209 210 5.841267 ATGGTTACATATGCCCTATGACA 57.159 39.130 1.58 4.73 39.79 3.58
210 211 5.638530 TGGTTACATATGCCCTATGACAA 57.361 39.130 1.58 2.41 39.79 3.18
211 212 6.007485 TGGTTACATATGCCCTATGACAAA 57.993 37.500 1.58 0.80 39.79 2.83
212 213 6.427441 TGGTTACATATGCCCTATGACAAAA 58.573 36.000 1.58 0.00 39.79 2.44
213 214 6.892456 TGGTTACATATGCCCTATGACAAAAA 59.108 34.615 1.58 0.00 39.79 1.94
214 215 7.068103 TGGTTACATATGCCCTATGACAAAAAG 59.932 37.037 1.58 0.00 39.79 2.27
215 216 7.068226 GGTTACATATGCCCTATGACAAAAAGT 59.932 37.037 1.58 0.00 39.79 2.66
216 217 9.116067 GTTACATATGCCCTATGACAAAAAGTA 57.884 33.333 1.58 0.00 39.79 2.24
217 218 9.688091 TTACATATGCCCTATGACAAAAAGTAA 57.312 29.630 1.58 0.00 39.79 2.24
218 219 8.766994 ACATATGCCCTATGACAAAAAGTAAT 57.233 30.769 1.58 0.00 39.79 1.89
219 220 9.200817 ACATATGCCCTATGACAAAAAGTAATT 57.799 29.630 1.58 0.00 39.79 1.40
224 225 8.527810 TGCCCTATGACAAAAAGTAATTTAAGG 58.472 33.333 0.00 0.00 0.00 2.69
225 226 7.491372 GCCCTATGACAAAAAGTAATTTAAGGC 59.509 37.037 0.00 0.00 0.00 4.35
226 227 8.527810 CCCTATGACAAAAAGTAATTTAAGGCA 58.472 33.333 0.00 0.00 31.25 4.75
227 228 9.353999 CCTATGACAAAAAGTAATTTAAGGCAC 57.646 33.333 0.00 0.00 29.95 5.01
228 229 9.353999 CTATGACAAAAAGTAATTTAAGGCACC 57.646 33.333 0.00 0.00 29.95 5.01
229 230 7.354751 TGACAAAAAGTAATTTAAGGCACCT 57.645 32.000 0.00 0.00 0.00 4.00
230 231 8.466617 TGACAAAAAGTAATTTAAGGCACCTA 57.533 30.769 0.00 0.00 0.00 3.08
231 232 8.354426 TGACAAAAAGTAATTTAAGGCACCTAC 58.646 33.333 0.00 0.00 0.00 3.18
232 233 8.240267 ACAAAAAGTAATTTAAGGCACCTACA 57.760 30.769 0.00 0.00 0.00 2.74
233 234 8.866093 ACAAAAAGTAATTTAAGGCACCTACAT 58.134 29.630 0.00 0.00 0.00 2.29
234 235 9.705290 CAAAAAGTAATTTAAGGCACCTACATT 57.295 29.630 0.00 0.00 0.00 2.71
259 260 2.837532 TTTTTCTCCCCAATGCAAGC 57.162 45.000 0.00 0.00 0.00 4.01
260 261 2.014010 TTTTCTCCCCAATGCAAGCT 57.986 45.000 0.00 0.00 0.00 3.74
261 262 2.897271 TTTCTCCCCAATGCAAGCTA 57.103 45.000 0.00 0.00 0.00 3.32
262 263 2.128771 TTCTCCCCAATGCAAGCTAC 57.871 50.000 0.00 0.00 0.00 3.58
263 264 0.255890 TCTCCCCAATGCAAGCTACC 59.744 55.000 0.00 0.00 0.00 3.18
264 265 0.034186 CTCCCCAATGCAAGCTACCA 60.034 55.000 0.00 0.00 0.00 3.25
265 266 0.323360 TCCCCAATGCAAGCTACCAC 60.323 55.000 0.00 0.00 0.00 4.16
266 267 0.323725 CCCCAATGCAAGCTACCACT 60.324 55.000 0.00 0.00 0.00 4.00
267 268 1.064758 CCCCAATGCAAGCTACCACTA 60.065 52.381 0.00 0.00 0.00 2.74
268 269 2.292267 CCCAATGCAAGCTACCACTAG 58.708 52.381 0.00 0.00 0.00 2.57
269 270 2.356125 CCCAATGCAAGCTACCACTAGT 60.356 50.000 0.00 0.00 0.00 2.57
270 271 2.679837 CCAATGCAAGCTACCACTAGTG 59.320 50.000 16.34 16.34 0.00 2.74
284 285 5.677319 CCACTAGTGGGACTCATTAAGAA 57.323 43.478 31.15 0.00 46.81 2.52
285 286 6.049955 CCACTAGTGGGACTCATTAAGAAA 57.950 41.667 31.15 0.00 46.81 2.52
286 287 6.653989 CCACTAGTGGGACTCATTAAGAAAT 58.346 40.000 31.15 0.00 46.81 2.17
287 288 7.792032 CCACTAGTGGGACTCATTAAGAAATA 58.208 38.462 31.15 0.00 46.81 1.40
288 289 7.928706 CCACTAGTGGGACTCATTAAGAAATAG 59.071 40.741 31.15 1.30 46.81 1.73
289 290 8.696374 CACTAGTGGGACTCATTAAGAAATAGA 58.304 37.037 15.49 0.00 0.00 1.98
290 291 9.268282 ACTAGTGGGACTCATTAAGAAATAGAA 57.732 33.333 0.00 0.00 0.00 2.10
293 294 9.981460 AGTGGGACTCATTAAGAAATAGAAAAT 57.019 29.630 0.00 0.00 0.00 1.82
313 314 9.672673 AGAAAATAAAGACTAGTACACATGCAT 57.327 29.630 0.00 0.00 0.00 3.96
314 315 9.922305 GAAAATAAAGACTAGTACACATGCATC 57.078 33.333 0.00 0.00 0.00 3.91
315 316 9.672673 AAAATAAAGACTAGTACACATGCATCT 57.327 29.630 0.00 0.00 0.00 2.90
316 317 8.879342 AATAAAGACTAGTACACATGCATCTC 57.121 34.615 0.00 0.00 0.00 2.75
317 318 6.537453 AAAGACTAGTACACATGCATCTCT 57.463 37.500 0.00 0.00 0.00 3.10
318 319 7.646548 AAAGACTAGTACACATGCATCTCTA 57.353 36.000 0.00 0.00 0.00 2.43
319 320 6.627395 AGACTAGTACACATGCATCTCTAC 57.373 41.667 0.00 0.00 0.00 2.59
320 321 6.361433 AGACTAGTACACATGCATCTCTACT 58.639 40.000 0.00 4.19 0.00 2.57
321 322 6.831353 AGACTAGTACACATGCATCTCTACTT 59.169 38.462 0.00 0.00 0.00 2.24
322 323 7.340743 AGACTAGTACACATGCATCTCTACTTT 59.659 37.037 0.00 0.00 0.00 2.66
323 324 7.841956 ACTAGTACACATGCATCTCTACTTTT 58.158 34.615 0.00 0.00 0.00 2.27
324 325 8.314751 ACTAGTACACATGCATCTCTACTTTTT 58.685 33.333 0.00 0.00 0.00 1.94
325 326 9.803315 CTAGTACACATGCATCTCTACTTTTTA 57.197 33.333 0.00 0.00 0.00 1.52
326 327 8.480643 AGTACACATGCATCTCTACTTTTTAC 57.519 34.615 0.00 0.00 0.00 2.01
327 328 8.314751 AGTACACATGCATCTCTACTTTTTACT 58.685 33.333 0.00 0.00 0.00 2.24
328 329 7.986085 ACACATGCATCTCTACTTTTTACTT 57.014 32.000 0.00 0.00 0.00 2.24
329 330 8.034058 ACACATGCATCTCTACTTTTTACTTC 57.966 34.615 0.00 0.00 0.00 3.01
330 331 7.661437 ACACATGCATCTCTACTTTTTACTTCA 59.339 33.333 0.00 0.00 0.00 3.02
331 332 8.506437 CACATGCATCTCTACTTTTTACTTCAA 58.494 33.333 0.00 0.00 0.00 2.69
332 333 8.507249 ACATGCATCTCTACTTTTTACTTCAAC 58.493 33.333 0.00 0.00 0.00 3.18
333 334 7.435068 TGCATCTCTACTTTTTACTTCAACC 57.565 36.000 0.00 0.00 0.00 3.77
334 335 7.224297 TGCATCTCTACTTTTTACTTCAACCT 58.776 34.615 0.00 0.00 0.00 3.50
335 336 7.719633 TGCATCTCTACTTTTTACTTCAACCTT 59.280 33.333 0.00 0.00 0.00 3.50
336 337 8.568794 GCATCTCTACTTTTTACTTCAACCTTT 58.431 33.333 0.00 0.00 0.00 3.11
339 340 9.675464 TCTCTACTTTTTACTTCAACCTTTTCA 57.325 29.630 0.00 0.00 0.00 2.69
340 341 9.937175 CTCTACTTTTTACTTCAACCTTTTCAG 57.063 33.333 0.00 0.00 0.00 3.02
341 342 8.403236 TCTACTTTTTACTTCAACCTTTTCAGC 58.597 33.333 0.00 0.00 0.00 4.26
342 343 7.170393 ACTTTTTACTTCAACCTTTTCAGCT 57.830 32.000 0.00 0.00 0.00 4.24
343 344 7.611770 ACTTTTTACTTCAACCTTTTCAGCTT 58.388 30.769 0.00 0.00 0.00 3.74
344 345 8.094548 ACTTTTTACTTCAACCTTTTCAGCTTT 58.905 29.630 0.00 0.00 0.00 3.51
345 346 8.840833 TTTTTACTTCAACCTTTTCAGCTTTT 57.159 26.923 0.00 0.00 0.00 2.27
346 347 7.826260 TTTACTTCAACCTTTTCAGCTTTTG 57.174 32.000 0.00 0.00 0.00 2.44
347 348 5.405935 ACTTCAACCTTTTCAGCTTTTGT 57.594 34.783 0.00 0.00 0.00 2.83
348 349 5.410924 ACTTCAACCTTTTCAGCTTTTGTC 58.589 37.500 0.00 0.00 0.00 3.18
349 350 5.047377 ACTTCAACCTTTTCAGCTTTTGTCA 60.047 36.000 0.00 0.00 0.00 3.58
350 351 4.743493 TCAACCTTTTCAGCTTTTGTCAC 58.257 39.130 0.00 0.00 0.00 3.67
351 352 3.801114 ACCTTTTCAGCTTTTGTCACC 57.199 42.857 0.00 0.00 0.00 4.02
352 353 2.099098 ACCTTTTCAGCTTTTGTCACCG 59.901 45.455 0.00 0.00 0.00 4.94
353 354 2.543653 CCTTTTCAGCTTTTGTCACCGG 60.544 50.000 0.00 0.00 0.00 5.28
354 355 1.757682 TTTCAGCTTTTGTCACCGGT 58.242 45.000 0.00 0.00 0.00 5.28
355 356 1.305201 TTCAGCTTTTGTCACCGGTC 58.695 50.000 2.59 0.00 0.00 4.79
356 357 0.534203 TCAGCTTTTGTCACCGGTCC 60.534 55.000 2.59 0.00 0.00 4.46
357 358 0.817634 CAGCTTTTGTCACCGGTCCA 60.818 55.000 2.59 0.54 0.00 4.02
358 359 0.818040 AGCTTTTGTCACCGGTCCAC 60.818 55.000 2.59 4.96 0.00 4.02
359 360 1.098712 GCTTTTGTCACCGGTCCACA 61.099 55.000 2.59 8.16 0.00 4.17
360 361 0.661020 CTTTTGTCACCGGTCCACAC 59.339 55.000 14.33 5.61 0.00 3.82
361 362 0.253610 TTTTGTCACCGGTCCACACT 59.746 50.000 14.33 0.00 0.00 3.55
362 363 0.253610 TTTGTCACCGGTCCACACTT 59.746 50.000 14.33 0.00 0.00 3.16
363 364 0.253610 TTGTCACCGGTCCACACTTT 59.746 50.000 14.33 0.00 0.00 2.66
364 365 0.253610 TGTCACCGGTCCACACTTTT 59.746 50.000 2.59 0.00 0.00 2.27
365 366 1.340211 TGTCACCGGTCCACACTTTTT 60.340 47.619 2.59 0.00 0.00 1.94
366 367 1.332686 GTCACCGGTCCACACTTTTTC 59.667 52.381 2.59 0.00 0.00 2.29
367 368 1.210967 TCACCGGTCCACACTTTTTCT 59.789 47.619 2.59 0.00 0.00 2.52
368 369 1.602377 CACCGGTCCACACTTTTTCTC 59.398 52.381 2.59 0.00 0.00 2.87
369 370 1.489230 ACCGGTCCACACTTTTTCTCT 59.511 47.619 0.00 0.00 0.00 3.10
370 371 2.092592 ACCGGTCCACACTTTTTCTCTT 60.093 45.455 0.00 0.00 0.00 2.85
371 372 2.548480 CCGGTCCACACTTTTTCTCTTC 59.452 50.000 0.00 0.00 0.00 2.87
372 373 3.202906 CGGTCCACACTTTTTCTCTTCA 58.797 45.455 0.00 0.00 0.00 3.02
373 374 3.625764 CGGTCCACACTTTTTCTCTTCAA 59.374 43.478 0.00 0.00 0.00 2.69
374 375 4.095782 CGGTCCACACTTTTTCTCTTCAAA 59.904 41.667 0.00 0.00 0.00 2.69
375 376 5.340803 GGTCCACACTTTTTCTCTTCAAAC 58.659 41.667 0.00 0.00 0.00 2.93
376 377 5.105917 GGTCCACACTTTTTCTCTTCAAACA 60.106 40.000 0.00 0.00 0.00 2.83
377 378 5.800438 GTCCACACTTTTTCTCTTCAAACAC 59.200 40.000 0.00 0.00 0.00 3.32
378 379 5.102313 CCACACTTTTTCTCTTCAAACACC 58.898 41.667 0.00 0.00 0.00 4.16
379 380 5.102313 CACACTTTTTCTCTTCAAACACCC 58.898 41.667 0.00 0.00 0.00 4.61
380 381 4.142469 ACACTTTTTCTCTTCAAACACCCG 60.142 41.667 0.00 0.00 0.00 5.28
381 382 3.181490 ACTTTTTCTCTTCAAACACCCGC 60.181 43.478 0.00 0.00 0.00 6.13
382 383 1.314730 TTTCTCTTCAAACACCCGCC 58.685 50.000 0.00 0.00 0.00 6.13
383 384 0.472471 TTCTCTTCAAACACCCGCCT 59.528 50.000 0.00 0.00 0.00 5.52
384 385 0.034896 TCTCTTCAAACACCCGCCTC 59.965 55.000 0.00 0.00 0.00 4.70
385 386 0.955919 CTCTTCAAACACCCGCCTCC 60.956 60.000 0.00 0.00 0.00 4.30
386 387 1.073199 CTTCAAACACCCGCCTCCT 59.927 57.895 0.00 0.00 0.00 3.69
387 388 1.228124 TTCAAACACCCGCCTCCTG 60.228 57.895 0.00 0.00 0.00 3.86
388 389 2.672996 CAAACACCCGCCTCCTGG 60.673 66.667 0.00 0.00 0.00 4.45
389 390 2.852075 AAACACCCGCCTCCTGGA 60.852 61.111 0.00 0.00 34.57 3.86
390 391 2.895424 AAACACCCGCCTCCTGGAG 61.895 63.158 17.02 17.02 34.57 3.86
391 392 3.846405 AACACCCGCCTCCTGGAGA 62.846 63.158 25.18 0.00 34.95 3.71
392 393 3.465403 CACCCGCCTCCTGGAGAG 61.465 72.222 25.18 17.02 42.83 3.20
393 394 3.673597 ACCCGCCTCCTGGAGAGA 61.674 66.667 25.18 0.00 46.50 3.10
394 395 2.364317 CCCGCCTCCTGGAGAGAA 60.364 66.667 25.18 0.00 46.50 2.87
395 396 1.764054 CCCGCCTCCTGGAGAGAAT 60.764 63.158 25.18 0.00 46.50 2.40
396 397 1.745264 CCGCCTCCTGGAGAGAATC 59.255 63.158 25.18 7.40 46.50 2.52
410 411 3.586100 GAGAATCTCGCTTCCCTATCC 57.414 52.381 0.00 0.00 0.00 2.59
411 412 2.894126 GAGAATCTCGCTTCCCTATCCA 59.106 50.000 0.00 0.00 0.00 3.41
412 413 3.309296 AGAATCTCGCTTCCCTATCCAA 58.691 45.455 0.00 0.00 0.00 3.53
413 414 3.711704 AGAATCTCGCTTCCCTATCCAAA 59.288 43.478 0.00 0.00 0.00 3.28
414 415 2.981859 TCTCGCTTCCCTATCCAAAC 57.018 50.000 0.00 0.00 0.00 2.93
415 416 1.485066 TCTCGCTTCCCTATCCAAACC 59.515 52.381 0.00 0.00 0.00 3.27
416 417 1.486726 CTCGCTTCCCTATCCAAACCT 59.513 52.381 0.00 0.00 0.00 3.50
417 418 2.698797 CTCGCTTCCCTATCCAAACCTA 59.301 50.000 0.00 0.00 0.00 3.08
418 419 2.433239 TCGCTTCCCTATCCAAACCTAC 59.567 50.000 0.00 0.00 0.00 3.18
419 420 2.434702 CGCTTCCCTATCCAAACCTACT 59.565 50.000 0.00 0.00 0.00 2.57
420 421 3.118371 CGCTTCCCTATCCAAACCTACTT 60.118 47.826 0.00 0.00 0.00 2.24
421 422 4.625564 CGCTTCCCTATCCAAACCTACTTT 60.626 45.833 0.00 0.00 0.00 2.66
422 423 5.395990 CGCTTCCCTATCCAAACCTACTTTA 60.396 44.000 0.00 0.00 0.00 1.85
423 424 5.821470 GCTTCCCTATCCAAACCTACTTTAC 59.179 44.000 0.00 0.00 0.00 2.01
424 425 5.603170 TCCCTATCCAAACCTACTTTACG 57.397 43.478 0.00 0.00 0.00 3.18
425 426 5.025453 TCCCTATCCAAACCTACTTTACGT 58.975 41.667 0.00 0.00 0.00 3.57
426 427 5.127682 TCCCTATCCAAACCTACTTTACGTC 59.872 44.000 0.00 0.00 0.00 4.34
427 428 5.105228 CCCTATCCAAACCTACTTTACGTCA 60.105 44.000 0.00 0.00 0.00 4.35
428 429 6.407752 CCCTATCCAAACCTACTTTACGTCAT 60.408 42.308 0.00 0.00 0.00 3.06
429 430 7.201938 CCCTATCCAAACCTACTTTACGTCATA 60.202 40.741 0.00 0.00 0.00 2.15
430 431 8.365647 CCTATCCAAACCTACTTTACGTCATAT 58.634 37.037 0.00 0.00 0.00 1.78
431 432 9.408069 CTATCCAAACCTACTTTACGTCATATC 57.592 37.037 0.00 0.00 0.00 1.63
432 433 6.576185 TCCAAACCTACTTTACGTCATATCC 58.424 40.000 0.00 0.00 0.00 2.59
433 434 5.461078 CCAAACCTACTTTACGTCATATCCG 59.539 44.000 0.00 0.00 0.00 4.18
434 435 6.267817 CAAACCTACTTTACGTCATATCCGA 58.732 40.000 0.00 0.00 0.00 4.55
435 436 6.645790 AACCTACTTTACGTCATATCCGAT 57.354 37.500 0.00 0.00 0.00 4.18
436 437 6.645790 ACCTACTTTACGTCATATCCGATT 57.354 37.500 0.00 0.00 0.00 3.34
437 438 6.675987 ACCTACTTTACGTCATATCCGATTC 58.324 40.000 0.00 0.00 0.00 2.52
438 439 6.489361 ACCTACTTTACGTCATATCCGATTCT 59.511 38.462 0.00 0.00 0.00 2.40
439 440 7.663081 ACCTACTTTACGTCATATCCGATTCTA 59.337 37.037 0.00 0.00 0.00 2.10
440 441 7.961827 CCTACTTTACGTCATATCCGATTCTAC 59.038 40.741 0.00 0.00 0.00 2.59
441 442 7.268199 ACTTTACGTCATATCCGATTCTACA 57.732 36.000 0.00 0.00 0.00 2.74
442 443 7.883217 ACTTTACGTCATATCCGATTCTACAT 58.117 34.615 0.00 0.00 0.00 2.29
443 444 7.808381 ACTTTACGTCATATCCGATTCTACATG 59.192 37.037 0.00 0.00 0.00 3.21
444 445 5.060662 ACGTCATATCCGATTCTACATGG 57.939 43.478 0.00 0.00 0.00 3.66
445 446 3.859961 CGTCATATCCGATTCTACATGGC 59.140 47.826 0.00 0.00 0.00 4.40
446 447 4.618227 CGTCATATCCGATTCTACATGGCA 60.618 45.833 0.00 0.00 0.00 4.92
447 448 5.423015 GTCATATCCGATTCTACATGGCAT 58.577 41.667 0.00 0.00 0.00 4.40
448 449 5.521735 GTCATATCCGATTCTACATGGCATC 59.478 44.000 0.00 0.00 0.00 3.91
449 450 2.839486 TCCGATTCTACATGGCATCC 57.161 50.000 0.00 0.00 0.00 3.51
450 451 2.046292 TCCGATTCTACATGGCATCCA 58.954 47.619 0.00 0.00 38.19 3.41
451 452 2.437651 TCCGATTCTACATGGCATCCAA 59.562 45.455 0.00 0.00 36.95 3.53
452 453 3.118075 TCCGATTCTACATGGCATCCAAA 60.118 43.478 0.00 0.00 36.95 3.28
453 454 3.251729 CCGATTCTACATGGCATCCAAAG 59.748 47.826 0.00 0.00 36.95 2.77
454 455 3.304257 CGATTCTACATGGCATCCAAAGC 60.304 47.826 0.00 0.00 36.95 3.51
455 456 2.804986 TCTACATGGCATCCAAAGCA 57.195 45.000 0.00 0.00 36.95 3.91
456 457 3.301794 TCTACATGGCATCCAAAGCAT 57.698 42.857 0.00 0.00 36.95 3.79
457 458 3.216800 TCTACATGGCATCCAAAGCATC 58.783 45.455 0.00 0.00 36.95 3.91
458 459 1.855295 ACATGGCATCCAAAGCATCA 58.145 45.000 0.00 0.00 36.95 3.07
459 460 1.479323 ACATGGCATCCAAAGCATCAC 59.521 47.619 0.00 0.00 36.95 3.06
460 461 1.117150 ATGGCATCCAAAGCATCACC 58.883 50.000 0.00 0.00 36.95 4.02
461 462 0.040058 TGGCATCCAAAGCATCACCT 59.960 50.000 0.00 0.00 0.00 4.00
462 463 1.188863 GGCATCCAAAGCATCACCTT 58.811 50.000 0.00 0.00 0.00 3.50
463 464 1.134907 GGCATCCAAAGCATCACCTTG 60.135 52.381 0.00 0.00 0.00 3.61
464 465 1.820519 GCATCCAAAGCATCACCTTGA 59.179 47.619 0.00 0.00 0.00 3.02
465 466 2.159282 GCATCCAAAGCATCACCTTGAG 60.159 50.000 0.00 0.00 0.00 3.02
466 467 2.205022 TCCAAAGCATCACCTTGAGG 57.795 50.000 0.00 0.00 42.17 3.86
473 474 2.336945 CATCACCTTGAGGCTATGCA 57.663 50.000 0.00 0.00 39.32 3.96
474 475 2.860009 CATCACCTTGAGGCTATGCAT 58.140 47.619 3.79 3.79 39.32 3.96
475 476 3.220110 CATCACCTTGAGGCTATGCATT 58.780 45.455 3.54 0.00 39.32 3.56
476 477 2.646930 TCACCTTGAGGCTATGCATTG 58.353 47.619 3.54 3.55 39.32 2.82
477 478 2.025981 TCACCTTGAGGCTATGCATTGT 60.026 45.455 3.54 0.00 39.32 2.71
478 479 3.199727 TCACCTTGAGGCTATGCATTGTA 59.800 43.478 3.54 0.00 39.32 2.41
479 480 3.313526 CACCTTGAGGCTATGCATTGTAC 59.686 47.826 3.54 0.42 39.32 2.90
480 481 3.054434 ACCTTGAGGCTATGCATTGTACA 60.054 43.478 3.54 2.41 39.32 2.90
481 482 4.139786 CCTTGAGGCTATGCATTGTACAT 58.860 43.478 3.54 0.00 0.00 2.29
482 483 4.023450 CCTTGAGGCTATGCATTGTACATG 60.023 45.833 3.54 7.24 0.00 3.21
483 484 2.880268 TGAGGCTATGCATTGTACATGC 59.120 45.455 3.54 17.91 44.76 4.06
484 485 3.144506 GAGGCTATGCATTGTACATGCT 58.855 45.455 22.31 14.34 44.79 3.79
485 486 3.144506 AGGCTATGCATTGTACATGCTC 58.855 45.455 22.31 13.11 44.79 4.26
486 487 3.144506 GGCTATGCATTGTACATGCTCT 58.855 45.455 22.31 15.43 44.79 4.09
487 488 4.040829 AGGCTATGCATTGTACATGCTCTA 59.959 41.667 22.31 15.62 44.79 2.43
488 489 4.756642 GGCTATGCATTGTACATGCTCTAA 59.243 41.667 22.31 9.64 44.79 2.10
683 684 2.168728 GCCGAGAAGTAGAAAGACCCAT 59.831 50.000 0.00 0.00 0.00 4.00
757 758 1.735376 GATTACTCCCGCCTCTCGCA 61.735 60.000 0.00 0.00 37.30 5.10
881 897 0.177373 CCCTCCACCTAACCTAACGC 59.823 60.000 0.00 0.00 0.00 4.84
922 938 2.558359 ACGCAAGGATCCAAGAAAAAGG 59.442 45.455 15.82 0.00 46.39 3.11
942 958 3.192922 GGGTGGACCGATTTCGCG 61.193 66.667 0.00 0.00 38.18 5.87
962 978 3.862845 GCGTCCATTTTCTTCTCTCTCTC 59.137 47.826 0.00 0.00 0.00 3.20
963 979 4.381505 GCGTCCATTTTCTTCTCTCTCTCT 60.382 45.833 0.00 0.00 0.00 3.10
964 980 5.339990 CGTCCATTTTCTTCTCTCTCTCTC 58.660 45.833 0.00 0.00 0.00 3.20
965 981 5.125417 CGTCCATTTTCTTCTCTCTCTCTCT 59.875 44.000 0.00 0.00 0.00 3.10
966 982 6.564328 GTCCATTTTCTTCTCTCTCTCTCTC 58.436 44.000 0.00 0.00 0.00 3.20
967 983 6.378280 GTCCATTTTCTTCTCTCTCTCTCTCT 59.622 42.308 0.00 0.00 0.00 3.10
968 984 6.603201 TCCATTTTCTTCTCTCTCTCTCTCTC 59.397 42.308 0.00 0.00 0.00 3.20
969 985 6.604795 CCATTTTCTTCTCTCTCTCTCTCTCT 59.395 42.308 0.00 0.00 0.00 3.10
970 986 7.201767 CCATTTTCTTCTCTCTCTCTCTCTCTC 60.202 44.444 0.00 0.00 0.00 3.20
971 987 4.655762 TCTTCTCTCTCTCTCTCTCTCG 57.344 50.000 0.00 0.00 0.00 4.04
972 988 3.384789 TCTTCTCTCTCTCTCTCTCTCGG 59.615 52.174 0.00 0.00 0.00 4.63
973 989 1.412710 TCTCTCTCTCTCTCTCTCGGC 59.587 57.143 0.00 0.00 0.00 5.54
974 990 0.468226 TCTCTCTCTCTCTCTCGGCC 59.532 60.000 0.00 0.00 0.00 6.13
975 991 0.180171 CTCTCTCTCTCTCTCGGCCA 59.820 60.000 2.24 0.00 0.00 5.36
1353 1610 2.104859 CGTCTCCTACGTCGCCTCA 61.105 63.158 0.00 0.00 46.72 3.86
1548 1805 1.304713 ACAGTACCACGACCCGGAT 60.305 57.895 0.73 0.00 0.00 4.18
1638 1904 2.359602 TCGCTCCTCTCCGACGTT 60.360 61.111 0.00 0.00 0.00 3.99
1653 1919 1.446792 CGTTGGCATCTCTGACGCT 60.447 57.895 0.00 0.00 30.50 5.07
1656 1922 3.260483 GGCATCTCTGACGCTGCG 61.260 66.667 21.91 21.91 35.47 5.18
2178 2444 4.408821 AAGGCGGCAATCGAGGCA 62.409 61.111 13.08 0.00 42.43 4.75
2883 3149 0.108424 AGAATGCAGTGTCCGCTCTC 60.108 55.000 0.00 0.00 0.00 3.20
2952 3218 4.013728 CAAAGATTCCGGGGTTGAATACA 58.986 43.478 0.00 0.00 32.74 2.29
2979 3245 2.039480 ACAGAACATCATGCTCACTGGT 59.961 45.455 0.00 0.00 0.00 4.00
3060 3326 1.756375 CGTCAGCAATGTCGCTAGGC 61.756 60.000 0.00 0.00 41.38 3.93
3386 3660 5.237815 TGTACATGTAGAACTTCAGCTTGG 58.762 41.667 5.62 0.00 0.00 3.61
3409 3683 3.751175 TGTTTCGTATGAAGCTTGGAAGG 59.249 43.478 2.10 0.00 36.40 3.46
3438 3712 9.890352 TTCTGTTTTTGTTCCATTTTTCAAAAG 57.110 25.926 0.00 0.00 39.66 2.27
3660 6488 7.727331 TTGGCAAGGAAAAATAACTTGAATG 57.273 32.000 7.73 0.00 43.13 2.67
3693 6521 4.093556 GCTTTGTAGAAGAAATCTGGGTCG 59.906 45.833 0.00 0.00 39.30 4.79
4155 6989 7.335924 ACAACAGGCGTTTGACTTGTATATATT 59.664 33.333 7.95 0.00 31.13 1.28
4156 6990 7.478520 ACAGGCGTTTGACTTGTATATATTC 57.521 36.000 0.00 0.00 0.00 1.75
4157 6991 6.482308 ACAGGCGTTTGACTTGTATATATTCC 59.518 38.462 0.00 0.00 0.00 3.01
4158 6992 5.995897 AGGCGTTTGACTTGTATATATTCCC 59.004 40.000 0.00 0.00 0.00 3.97
4159 6993 5.995897 GGCGTTTGACTTGTATATATTCCCT 59.004 40.000 0.00 0.00 0.00 4.20
4160 6994 6.485648 GGCGTTTGACTTGTATATATTCCCTT 59.514 38.462 0.00 0.00 0.00 3.95
4161 6995 7.307811 GGCGTTTGACTTGTATATATTCCCTTC 60.308 40.741 0.00 0.00 0.00 3.46
4162 6996 7.568861 GCGTTTGACTTGTATATATTCCCTTCG 60.569 40.741 0.00 0.00 0.00 3.79
4163 6997 7.437267 CGTTTGACTTGTATATATTCCCTTCGT 59.563 37.037 0.00 0.00 0.00 3.85
4164 6998 8.762426 GTTTGACTTGTATATATTCCCTTCGTC 58.238 37.037 0.00 0.00 0.00 4.20
4165 6999 6.989659 TGACTTGTATATATTCCCTTCGTCC 58.010 40.000 0.00 0.00 0.00 4.79
4166 7000 6.022163 ACTTGTATATATTCCCTTCGTCCG 57.978 41.667 0.00 0.00 0.00 4.79
4167 7001 5.047519 ACTTGTATATATTCCCTTCGTCCGG 60.048 44.000 0.00 0.00 0.00 5.14
4168 7002 4.410099 TGTATATATTCCCTTCGTCCGGT 58.590 43.478 0.00 0.00 0.00 5.28
4169 7003 3.955650 ATATATTCCCTTCGTCCGGTG 57.044 47.619 0.00 0.00 0.00 4.94
4170 7004 1.784358 ATATTCCCTTCGTCCGGTGA 58.216 50.000 0.00 0.00 0.00 4.02
4171 7005 1.559368 TATTCCCTTCGTCCGGTGAA 58.441 50.000 0.00 6.53 0.00 3.18
4172 7006 0.249398 ATTCCCTTCGTCCGGTGAAG 59.751 55.000 23.64 23.64 41.95 3.02
4173 7007 0.828762 TTCCCTTCGTCCGGTGAAGA 60.829 55.000 28.83 15.05 44.42 2.87
4174 7008 1.215647 CCCTTCGTCCGGTGAAGAG 59.784 63.158 28.83 18.60 44.42 2.85
4175 7009 1.533469 CCCTTCGTCCGGTGAAGAGT 61.533 60.000 28.83 0.00 44.42 3.24
4176 7010 0.388649 CCTTCGTCCGGTGAAGAGTG 60.389 60.000 28.83 15.57 44.42 3.51
4177 7011 0.314302 CTTCGTCCGGTGAAGAGTGT 59.686 55.000 25.31 0.00 44.42 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 7.049799 ACCCAACGTTGTACTAACTTTAGTA 57.950 36.000 25.63 4.98 43.36 1.82
15 16 5.917462 ACCCAACGTTGTACTAACTTTAGT 58.083 37.500 25.63 6.85 45.39 2.24
16 17 6.849588 AACCCAACGTTGTACTAACTTTAG 57.150 37.500 25.63 6.66 33.35 1.85
17 18 8.367156 AGATAACCCAACGTTGTACTAACTTTA 58.633 33.333 25.63 11.13 35.79 1.85
18 19 7.219322 AGATAACCCAACGTTGTACTAACTTT 58.781 34.615 25.63 9.54 35.79 2.66
19 20 6.762333 AGATAACCCAACGTTGTACTAACTT 58.238 36.000 25.63 8.91 35.79 2.66
20 21 6.350629 AGATAACCCAACGTTGTACTAACT 57.649 37.500 25.63 14.86 35.79 2.24
21 22 8.707938 AATAGATAACCCAACGTTGTACTAAC 57.292 34.615 25.63 13.06 35.79 2.34
22 23 9.723601 AAAATAGATAACCCAACGTTGTACTAA 57.276 29.630 25.63 8.55 35.79 2.24
23 24 9.153721 CAAAATAGATAACCCAACGTTGTACTA 57.846 33.333 25.63 17.43 35.79 1.82
24 25 7.120138 CCAAAATAGATAACCCAACGTTGTACT 59.880 37.037 25.63 16.11 35.79 2.73
25 26 7.119553 TCCAAAATAGATAACCCAACGTTGTAC 59.880 37.037 25.63 10.55 35.79 2.90
26 27 7.166851 TCCAAAATAGATAACCCAACGTTGTA 58.833 34.615 25.63 12.90 35.79 2.41
27 28 6.005198 TCCAAAATAGATAACCCAACGTTGT 58.995 36.000 25.63 11.05 35.79 3.32
28 29 6.503589 TCCAAAATAGATAACCCAACGTTG 57.496 37.500 21.47 21.47 35.79 4.10
29 30 6.490721 TGTTCCAAAATAGATAACCCAACGTT 59.509 34.615 0.00 0.00 38.57 3.99
30 31 6.005198 TGTTCCAAAATAGATAACCCAACGT 58.995 36.000 0.00 0.00 0.00 3.99
31 32 6.373216 TCTGTTCCAAAATAGATAACCCAACG 59.627 38.462 0.00 0.00 28.72 4.10
32 33 7.610305 TCTCTGTTCCAAAATAGATAACCCAAC 59.390 37.037 0.00 0.00 32.88 3.77
33 34 7.695055 TCTCTGTTCCAAAATAGATAACCCAA 58.305 34.615 0.00 0.00 32.88 4.12
34 35 7.265599 TCTCTGTTCCAAAATAGATAACCCA 57.734 36.000 0.00 0.00 32.88 4.51
35 36 8.575649 TTTCTCTGTTCCAAAATAGATAACCC 57.424 34.615 0.00 0.00 32.88 4.11
36 37 9.232473 ACTTTCTCTGTTCCAAAATAGATAACC 57.768 33.333 0.00 0.00 32.88 2.85
53 54 9.814899 ATGAGTCACAGATAAATACTTTCTCTG 57.185 33.333 11.32 11.32 44.66 3.35
57 58 9.255304 GGAGATGAGTCACAGATAAATACTTTC 57.745 37.037 0.00 0.00 0.00 2.62
58 59 8.986991 AGGAGATGAGTCACAGATAAATACTTT 58.013 33.333 0.00 0.00 0.00 2.66
59 60 8.546083 AGGAGATGAGTCACAGATAAATACTT 57.454 34.615 0.00 0.00 0.00 2.24
60 61 9.073475 GTAGGAGATGAGTCACAGATAAATACT 57.927 37.037 0.00 0.00 0.00 2.12
61 62 9.073475 AGTAGGAGATGAGTCACAGATAAATAC 57.927 37.037 0.00 0.00 0.00 1.89
62 63 9.290988 GAGTAGGAGATGAGTCACAGATAAATA 57.709 37.037 0.00 0.00 0.00 1.40
63 64 7.040755 CGAGTAGGAGATGAGTCACAGATAAAT 60.041 40.741 0.00 0.00 0.00 1.40
64 65 6.261158 CGAGTAGGAGATGAGTCACAGATAAA 59.739 42.308 0.00 0.00 0.00 1.40
65 66 5.760743 CGAGTAGGAGATGAGTCACAGATAA 59.239 44.000 0.00 0.00 0.00 1.75
66 67 5.301555 CGAGTAGGAGATGAGTCACAGATA 58.698 45.833 0.00 0.00 0.00 1.98
67 68 4.133820 CGAGTAGGAGATGAGTCACAGAT 58.866 47.826 0.00 0.00 0.00 2.90
68 69 3.536570 CGAGTAGGAGATGAGTCACAGA 58.463 50.000 0.00 0.00 0.00 3.41
69 70 2.032799 GCGAGTAGGAGATGAGTCACAG 59.967 54.545 0.00 0.00 0.00 3.66
70 71 2.017782 GCGAGTAGGAGATGAGTCACA 58.982 52.381 0.00 0.00 0.00 3.58
71 72 1.335496 GGCGAGTAGGAGATGAGTCAC 59.665 57.143 0.00 0.00 0.00 3.67
72 73 1.064685 TGGCGAGTAGGAGATGAGTCA 60.065 52.381 0.00 0.00 0.00 3.41
73 74 1.681538 TGGCGAGTAGGAGATGAGTC 58.318 55.000 0.00 0.00 0.00 3.36
74 75 2.373335 ATGGCGAGTAGGAGATGAGT 57.627 50.000 0.00 0.00 0.00 3.41
75 76 6.238897 GGAATATATGGCGAGTAGGAGATGAG 60.239 46.154 0.00 0.00 0.00 2.90
76 77 5.594725 GGAATATATGGCGAGTAGGAGATGA 59.405 44.000 0.00 0.00 0.00 2.92
77 78 5.221342 GGGAATATATGGCGAGTAGGAGATG 60.221 48.000 0.00 0.00 0.00 2.90
78 79 4.896482 GGGAATATATGGCGAGTAGGAGAT 59.104 45.833 0.00 0.00 0.00 2.75
79 80 4.017407 AGGGAATATATGGCGAGTAGGAGA 60.017 45.833 0.00 0.00 0.00 3.71
80 81 4.282496 AGGGAATATATGGCGAGTAGGAG 58.718 47.826 0.00 0.00 0.00 3.69
81 82 4.017407 AGAGGGAATATATGGCGAGTAGGA 60.017 45.833 0.00 0.00 0.00 2.94
82 83 4.282496 AGAGGGAATATATGGCGAGTAGG 58.718 47.826 0.00 0.00 0.00 3.18
83 84 5.197451 AGAGAGGGAATATATGGCGAGTAG 58.803 45.833 0.00 0.00 0.00 2.57
84 85 5.194473 AGAGAGGGAATATATGGCGAGTA 57.806 43.478 0.00 0.00 0.00 2.59
85 86 4.054359 AGAGAGGGAATATATGGCGAGT 57.946 45.455 0.00 0.00 0.00 4.18
86 87 4.464244 TCAAGAGAGGGAATATATGGCGAG 59.536 45.833 0.00 0.00 0.00 5.03
87 88 4.416516 TCAAGAGAGGGAATATATGGCGA 58.583 43.478 0.00 0.00 0.00 5.54
88 89 4.808414 TCAAGAGAGGGAATATATGGCG 57.192 45.455 0.00 0.00 0.00 5.69
89 90 6.538263 ACTTTCAAGAGAGGGAATATATGGC 58.462 40.000 0.00 0.00 0.00 4.40
90 91 8.844244 CAAACTTTCAAGAGAGGGAATATATGG 58.156 37.037 0.00 0.00 0.00 2.74
91 92 9.618890 TCAAACTTTCAAGAGAGGGAATATATG 57.381 33.333 0.00 0.00 0.00 1.78
94 95 8.964772 CATTCAAACTTTCAAGAGAGGGAATAT 58.035 33.333 0.00 0.00 0.00 1.28
95 96 7.094205 GCATTCAAACTTTCAAGAGAGGGAATA 60.094 37.037 0.00 0.00 0.00 1.75
96 97 6.294955 GCATTCAAACTTTCAAGAGAGGGAAT 60.295 38.462 0.00 0.00 0.00 3.01
97 98 5.010012 GCATTCAAACTTTCAAGAGAGGGAA 59.990 40.000 0.00 0.00 0.00 3.97
98 99 4.520492 GCATTCAAACTTTCAAGAGAGGGA 59.480 41.667 0.00 0.00 0.00 4.20
99 100 4.321527 GGCATTCAAACTTTCAAGAGAGGG 60.322 45.833 0.00 0.00 0.00 4.30
100 101 4.279169 TGGCATTCAAACTTTCAAGAGAGG 59.721 41.667 0.00 0.00 0.00 3.69
101 102 5.443185 TGGCATTCAAACTTTCAAGAGAG 57.557 39.130 0.00 0.00 0.00 3.20
102 103 6.071952 GGTATGGCATTCAAACTTTCAAGAGA 60.072 38.462 4.78 0.00 0.00 3.10
103 104 6.095377 GGTATGGCATTCAAACTTTCAAGAG 58.905 40.000 4.78 0.00 0.00 2.85
104 105 5.538053 TGGTATGGCATTCAAACTTTCAAGA 59.462 36.000 4.78 0.00 0.00 3.02
105 106 5.782047 TGGTATGGCATTCAAACTTTCAAG 58.218 37.500 4.78 0.00 0.00 3.02
106 107 5.798125 TGGTATGGCATTCAAACTTTCAA 57.202 34.783 4.78 0.00 0.00 2.69
107 108 5.798125 TTGGTATGGCATTCAAACTTTCA 57.202 34.783 4.78 0.00 0.00 2.69
108 109 6.366061 GTCTTTGGTATGGCATTCAAACTTTC 59.634 38.462 18.37 9.68 0.00 2.62
109 110 6.041979 AGTCTTTGGTATGGCATTCAAACTTT 59.958 34.615 18.37 8.73 0.00 2.66
110 111 5.539955 AGTCTTTGGTATGGCATTCAAACTT 59.460 36.000 18.37 8.97 0.00 2.66
111 112 5.079643 AGTCTTTGGTATGGCATTCAAACT 58.920 37.500 18.37 14.75 0.00 2.66
112 113 5.391312 AGTCTTTGGTATGGCATTCAAAC 57.609 39.130 18.37 13.34 0.00 2.93
113 114 6.183360 ACAAAGTCTTTGGTATGGCATTCAAA 60.183 34.615 25.38 19.97 44.81 2.69
114 115 5.304101 ACAAAGTCTTTGGTATGGCATTCAA 59.696 36.000 25.38 8.53 44.81 2.69
115 116 4.832266 ACAAAGTCTTTGGTATGGCATTCA 59.168 37.500 25.38 1.86 44.81 2.57
116 117 5.048083 TCACAAAGTCTTTGGTATGGCATTC 60.048 40.000 25.38 0.00 44.81 2.67
117 118 4.832266 TCACAAAGTCTTTGGTATGGCATT 59.168 37.500 25.38 2.45 44.81 3.56
118 119 4.406456 TCACAAAGTCTTTGGTATGGCAT 58.594 39.130 25.38 4.88 44.81 4.40
119 120 3.826524 TCACAAAGTCTTTGGTATGGCA 58.173 40.909 25.38 0.00 44.81 4.92
120 121 4.846779 TTCACAAAGTCTTTGGTATGGC 57.153 40.909 25.38 0.00 44.81 4.40
121 122 5.212194 CGTTTCACAAAGTCTTTGGTATGG 58.788 41.667 25.38 11.74 44.81 2.74
122 123 5.816919 ACGTTTCACAAAGTCTTTGGTATG 58.183 37.500 25.38 16.26 44.81 2.39
123 124 6.127842 ACAACGTTTCACAAAGTCTTTGGTAT 60.128 34.615 25.38 5.79 44.81 2.73
124 125 5.181622 ACAACGTTTCACAAAGTCTTTGGTA 59.818 36.000 25.38 12.59 44.81 3.25
125 126 4.022676 ACAACGTTTCACAAAGTCTTTGGT 60.023 37.500 25.38 12.12 44.81 3.67
126 127 4.323336 CACAACGTTTCACAAAGTCTTTGG 59.677 41.667 25.38 15.84 44.81 3.28
127 128 5.059221 GTCACAACGTTTCACAAAGTCTTTG 59.941 40.000 21.34 21.34 45.95 2.77
128 129 5.151389 GTCACAACGTTTCACAAAGTCTTT 58.849 37.500 0.00 0.00 0.00 2.52
129 130 4.668177 CGTCACAACGTTTCACAAAGTCTT 60.668 41.667 0.00 0.00 43.94 3.01
130 131 3.181524 CGTCACAACGTTTCACAAAGTCT 60.182 43.478 0.00 0.00 43.94 3.24
131 132 3.088552 CGTCACAACGTTTCACAAAGTC 58.911 45.455 0.00 0.00 43.94 3.01
132 133 3.111958 CGTCACAACGTTTCACAAAGT 57.888 42.857 0.00 0.00 43.94 2.66
166 167 0.969917 TGCCACCATTGTACATGCCC 60.970 55.000 0.00 0.00 0.00 5.36
167 168 1.113788 ATGCCACCATTGTACATGCC 58.886 50.000 0.00 0.00 0.00 4.40
168 169 3.305539 CCATATGCCACCATTGTACATGC 60.306 47.826 0.00 0.00 32.85 4.06
169 170 3.890756 ACCATATGCCACCATTGTACATG 59.109 43.478 0.00 0.00 32.85 3.21
170 171 4.183223 ACCATATGCCACCATTGTACAT 57.817 40.909 0.00 0.00 32.85 2.29
171 172 3.660970 ACCATATGCCACCATTGTACA 57.339 42.857 0.00 0.00 32.85 2.90
172 173 4.884744 TGTAACCATATGCCACCATTGTAC 59.115 41.667 0.00 0.00 32.85 2.90
173 174 5.117406 TGTAACCATATGCCACCATTGTA 57.883 39.130 0.00 0.00 32.85 2.41
174 175 3.974719 TGTAACCATATGCCACCATTGT 58.025 40.909 0.00 0.00 32.85 2.71
175 176 6.839124 ATATGTAACCATATGCCACCATTG 57.161 37.500 0.00 0.00 41.64 2.82
185 186 7.509236 TGTCATAGGGCATATGTAACCATAT 57.491 36.000 17.67 2.20 43.54 1.78
186 187 6.943899 TGTCATAGGGCATATGTAACCATA 57.056 37.500 17.67 0.00 41.82 2.74
187 188 5.841267 TGTCATAGGGCATATGTAACCAT 57.159 39.130 17.67 0.00 41.82 3.55
188 189 5.638530 TTGTCATAGGGCATATGTAACCA 57.361 39.130 17.67 8.68 41.82 3.67
189 190 6.952773 TTTTGTCATAGGGCATATGTAACC 57.047 37.500 17.67 4.96 41.82 2.85
190 191 7.996385 ACTTTTTGTCATAGGGCATATGTAAC 58.004 34.615 17.67 10.75 41.82 2.50
191 192 9.688091 TTACTTTTTGTCATAGGGCATATGTAA 57.312 29.630 17.67 11.84 41.82 2.41
192 193 9.860650 ATTACTTTTTGTCATAGGGCATATGTA 57.139 29.630 17.67 6.87 41.82 2.29
193 194 8.766994 ATTACTTTTTGTCATAGGGCATATGT 57.233 30.769 17.67 0.15 41.82 2.29
198 199 8.527810 CCTTAAATTACTTTTTGTCATAGGGCA 58.472 33.333 0.00 0.00 0.00 5.36
199 200 7.491372 GCCTTAAATTACTTTTTGTCATAGGGC 59.509 37.037 0.00 0.00 0.00 5.19
200 201 8.527810 TGCCTTAAATTACTTTTTGTCATAGGG 58.472 33.333 0.00 0.00 0.00 3.53
201 202 9.353999 GTGCCTTAAATTACTTTTTGTCATAGG 57.646 33.333 0.00 0.00 0.00 2.57
202 203 9.353999 GGTGCCTTAAATTACTTTTTGTCATAG 57.646 33.333 0.00 0.00 0.00 2.23
203 204 9.084533 AGGTGCCTTAAATTACTTTTTGTCATA 57.915 29.630 0.00 0.00 0.00 2.15
204 205 7.962441 AGGTGCCTTAAATTACTTTTTGTCAT 58.038 30.769 0.00 0.00 0.00 3.06
205 206 7.354751 AGGTGCCTTAAATTACTTTTTGTCA 57.645 32.000 0.00 0.00 0.00 3.58
206 207 8.354426 TGTAGGTGCCTTAAATTACTTTTTGTC 58.646 33.333 0.00 0.00 0.00 3.18
207 208 8.240267 TGTAGGTGCCTTAAATTACTTTTTGT 57.760 30.769 0.00 0.00 0.00 2.83
208 209 9.705290 AATGTAGGTGCCTTAAATTACTTTTTG 57.295 29.630 0.00 0.00 0.00 2.44
240 241 2.328319 AGCTTGCATTGGGGAGAAAAA 58.672 42.857 0.00 0.00 0.00 1.94
241 242 2.014010 AGCTTGCATTGGGGAGAAAA 57.986 45.000 0.00 0.00 0.00 2.29
242 243 2.446435 GTAGCTTGCATTGGGGAGAAA 58.554 47.619 0.00 0.00 0.00 2.52
243 244 1.340991 GGTAGCTTGCATTGGGGAGAA 60.341 52.381 0.00 0.00 0.00 2.87
244 245 0.255890 GGTAGCTTGCATTGGGGAGA 59.744 55.000 0.00 0.00 0.00 3.71
245 246 0.034186 TGGTAGCTTGCATTGGGGAG 60.034 55.000 0.00 0.00 0.00 4.30
246 247 0.323360 GTGGTAGCTTGCATTGGGGA 60.323 55.000 0.00 0.00 0.00 4.81
247 248 0.323725 AGTGGTAGCTTGCATTGGGG 60.324 55.000 0.00 0.00 0.00 4.96
248 249 2.292267 CTAGTGGTAGCTTGCATTGGG 58.708 52.381 0.00 0.00 0.00 4.12
249 250 2.679837 CACTAGTGGTAGCTTGCATTGG 59.320 50.000 15.49 0.00 0.00 3.16
250 251 2.679837 CCACTAGTGGTAGCTTGCATTG 59.320 50.000 30.57 3.32 45.53 2.82
251 252 2.991250 CCACTAGTGGTAGCTTGCATT 58.009 47.619 30.57 0.00 45.53 3.56
252 253 2.698855 CCACTAGTGGTAGCTTGCAT 57.301 50.000 30.57 0.00 45.53 3.96
263 264 8.696374 TCTATTTCTTAATGAGTCCCACTAGTG 58.304 37.037 16.34 16.34 0.00 2.74
264 265 8.840200 TCTATTTCTTAATGAGTCCCACTAGT 57.160 34.615 0.00 0.00 0.00 2.57
267 268 9.981460 ATTTTCTATTTCTTAATGAGTCCCACT 57.019 29.630 0.00 0.00 0.00 4.00
287 288 9.672673 ATGCATGTGTACTAGTCTTTATTTTCT 57.327 29.630 0.00 0.00 0.00 2.52
288 289 9.922305 GATGCATGTGTACTAGTCTTTATTTTC 57.078 33.333 2.46 0.00 0.00 2.29
289 290 9.672673 AGATGCATGTGTACTAGTCTTTATTTT 57.327 29.630 2.46 0.00 0.00 1.82
290 291 9.319143 GAGATGCATGTGTACTAGTCTTTATTT 57.681 33.333 2.46 0.00 0.00 1.40
291 292 8.700051 AGAGATGCATGTGTACTAGTCTTTATT 58.300 33.333 2.46 0.00 0.00 1.40
292 293 8.243961 AGAGATGCATGTGTACTAGTCTTTAT 57.756 34.615 2.46 0.00 0.00 1.40
293 294 7.646548 AGAGATGCATGTGTACTAGTCTTTA 57.353 36.000 2.46 0.00 0.00 1.85
294 295 6.537453 AGAGATGCATGTGTACTAGTCTTT 57.463 37.500 2.46 0.00 0.00 2.52
295 296 6.831353 AGTAGAGATGCATGTGTACTAGTCTT 59.169 38.462 26.28 7.09 30.07 3.01
296 297 6.361433 AGTAGAGATGCATGTGTACTAGTCT 58.639 40.000 26.28 7.72 30.07 3.24
297 298 6.627395 AGTAGAGATGCATGTGTACTAGTC 57.373 41.667 26.28 4.96 30.07 2.59
298 299 7.411486 AAAGTAGAGATGCATGTGTACTAGT 57.589 36.000 27.25 18.15 30.49 2.57
299 300 8.709386 AAAAAGTAGAGATGCATGTGTACTAG 57.291 34.615 27.25 0.00 30.49 2.57
300 301 9.582431 GTAAAAAGTAGAGATGCATGTGTACTA 57.418 33.333 27.25 13.62 30.49 1.82
301 302 8.314751 AGTAAAAAGTAGAGATGCATGTGTACT 58.685 33.333 23.22 23.22 32.62 2.73
302 303 8.480643 AGTAAAAAGTAGAGATGCATGTGTAC 57.519 34.615 19.88 19.88 0.00 2.90
303 304 9.151471 GAAGTAAAAAGTAGAGATGCATGTGTA 57.849 33.333 2.46 0.00 0.00 2.90
304 305 7.661437 TGAAGTAAAAAGTAGAGATGCATGTGT 59.339 33.333 2.46 0.00 0.00 3.72
305 306 8.032952 TGAAGTAAAAAGTAGAGATGCATGTG 57.967 34.615 2.46 0.00 0.00 3.21
306 307 8.507249 GTTGAAGTAAAAAGTAGAGATGCATGT 58.493 33.333 2.46 0.00 0.00 3.21
307 308 7.965107 GGTTGAAGTAAAAAGTAGAGATGCATG 59.035 37.037 2.46 0.00 0.00 4.06
308 309 7.885399 AGGTTGAAGTAAAAAGTAGAGATGCAT 59.115 33.333 0.00 0.00 0.00 3.96
309 310 7.224297 AGGTTGAAGTAAAAAGTAGAGATGCA 58.776 34.615 0.00 0.00 0.00 3.96
310 311 7.674471 AGGTTGAAGTAAAAAGTAGAGATGC 57.326 36.000 0.00 0.00 0.00 3.91
313 314 9.675464 TGAAAAGGTTGAAGTAAAAAGTAGAGA 57.325 29.630 0.00 0.00 0.00 3.10
314 315 9.937175 CTGAAAAGGTTGAAGTAAAAAGTAGAG 57.063 33.333 0.00 0.00 0.00 2.43
315 316 8.403236 GCTGAAAAGGTTGAAGTAAAAAGTAGA 58.597 33.333 0.00 0.00 0.00 2.59
316 317 8.406297 AGCTGAAAAGGTTGAAGTAAAAAGTAG 58.594 33.333 0.00 0.00 0.00 2.57
317 318 8.288689 AGCTGAAAAGGTTGAAGTAAAAAGTA 57.711 30.769 0.00 0.00 0.00 2.24
318 319 7.170393 AGCTGAAAAGGTTGAAGTAAAAAGT 57.830 32.000 0.00 0.00 0.00 2.66
319 320 8.479313 AAAGCTGAAAAGGTTGAAGTAAAAAG 57.521 30.769 0.00 0.00 0.00 2.27
320 321 8.716909 CAAAAGCTGAAAAGGTTGAAGTAAAAA 58.283 29.630 0.00 0.00 0.00 1.94
321 322 7.875554 ACAAAAGCTGAAAAGGTTGAAGTAAAA 59.124 29.630 0.00 0.00 0.00 1.52
322 323 7.382898 ACAAAAGCTGAAAAGGTTGAAGTAAA 58.617 30.769 0.00 0.00 0.00 2.01
323 324 6.930731 ACAAAAGCTGAAAAGGTTGAAGTAA 58.069 32.000 0.00 0.00 0.00 2.24
324 325 6.151985 TGACAAAAGCTGAAAAGGTTGAAGTA 59.848 34.615 0.00 0.00 0.00 2.24
325 326 5.047377 TGACAAAAGCTGAAAAGGTTGAAGT 60.047 36.000 0.00 0.00 0.00 3.01
326 327 5.289434 GTGACAAAAGCTGAAAAGGTTGAAG 59.711 40.000 0.00 0.00 0.00 3.02
327 328 5.167845 GTGACAAAAGCTGAAAAGGTTGAA 58.832 37.500 0.00 0.00 0.00 2.69
328 329 4.381505 GGTGACAAAAGCTGAAAAGGTTGA 60.382 41.667 0.00 0.00 0.00 3.18
329 330 3.865164 GGTGACAAAAGCTGAAAAGGTTG 59.135 43.478 0.00 0.00 0.00 3.77
330 331 3.428862 CGGTGACAAAAGCTGAAAAGGTT 60.429 43.478 0.00 0.00 0.00 3.50
331 332 2.099098 CGGTGACAAAAGCTGAAAAGGT 59.901 45.455 0.00 0.00 0.00 3.50
332 333 2.543653 CCGGTGACAAAAGCTGAAAAGG 60.544 50.000 0.00 0.00 0.00 3.11
333 334 2.099098 ACCGGTGACAAAAGCTGAAAAG 59.901 45.455 6.12 0.00 0.00 2.27
334 335 2.096248 ACCGGTGACAAAAGCTGAAAA 58.904 42.857 6.12 0.00 0.00 2.29
335 336 1.673920 GACCGGTGACAAAAGCTGAAA 59.326 47.619 14.63 0.00 0.00 2.69
336 337 1.305201 GACCGGTGACAAAAGCTGAA 58.695 50.000 14.63 0.00 0.00 3.02
337 338 0.534203 GGACCGGTGACAAAAGCTGA 60.534 55.000 14.63 0.00 0.00 4.26
338 339 0.817634 TGGACCGGTGACAAAAGCTG 60.818 55.000 14.63 0.00 0.00 4.24
339 340 0.818040 GTGGACCGGTGACAAAAGCT 60.818 55.000 14.63 0.00 0.00 3.74
340 341 1.098712 TGTGGACCGGTGACAAAAGC 61.099 55.000 14.63 0.00 0.00 3.51
341 342 0.661020 GTGTGGACCGGTGACAAAAG 59.339 55.000 14.63 0.00 0.00 2.27
342 343 0.253610 AGTGTGGACCGGTGACAAAA 59.746 50.000 14.63 0.00 0.00 2.44
343 344 0.253610 AAGTGTGGACCGGTGACAAA 59.746 50.000 14.63 2.49 0.00 2.83
344 345 0.253610 AAAGTGTGGACCGGTGACAA 59.746 50.000 14.63 0.00 0.00 3.18
345 346 0.253610 AAAAGTGTGGACCGGTGACA 59.746 50.000 14.63 12.48 0.00 3.58
346 347 1.332686 GAAAAAGTGTGGACCGGTGAC 59.667 52.381 14.63 9.43 0.00 3.67
347 348 1.210967 AGAAAAAGTGTGGACCGGTGA 59.789 47.619 14.63 0.00 0.00 4.02
348 349 1.602377 GAGAAAAAGTGTGGACCGGTG 59.398 52.381 14.63 0.00 0.00 4.94
349 350 1.489230 AGAGAAAAAGTGTGGACCGGT 59.511 47.619 6.92 6.92 0.00 5.28
350 351 2.256117 AGAGAAAAAGTGTGGACCGG 57.744 50.000 0.00 0.00 0.00 5.28
351 352 3.202906 TGAAGAGAAAAAGTGTGGACCG 58.797 45.455 0.00 0.00 0.00 4.79
352 353 5.105917 TGTTTGAAGAGAAAAAGTGTGGACC 60.106 40.000 0.00 0.00 0.00 4.46
353 354 5.800438 GTGTTTGAAGAGAAAAAGTGTGGAC 59.200 40.000 0.00 0.00 0.00 4.02
354 355 5.105917 GGTGTTTGAAGAGAAAAAGTGTGGA 60.106 40.000 0.00 0.00 0.00 4.02
355 356 5.102313 GGTGTTTGAAGAGAAAAAGTGTGG 58.898 41.667 0.00 0.00 0.00 4.17
356 357 5.102313 GGGTGTTTGAAGAGAAAAAGTGTG 58.898 41.667 0.00 0.00 0.00 3.82
357 358 4.142469 CGGGTGTTTGAAGAGAAAAAGTGT 60.142 41.667 0.00 0.00 0.00 3.55
358 359 4.351192 CGGGTGTTTGAAGAGAAAAAGTG 58.649 43.478 0.00 0.00 0.00 3.16
359 360 3.181490 GCGGGTGTTTGAAGAGAAAAAGT 60.181 43.478 0.00 0.00 0.00 2.66
360 361 3.372060 GCGGGTGTTTGAAGAGAAAAAG 58.628 45.455 0.00 0.00 0.00 2.27
361 362 2.100087 GGCGGGTGTTTGAAGAGAAAAA 59.900 45.455 0.00 0.00 0.00 1.94
362 363 1.679153 GGCGGGTGTTTGAAGAGAAAA 59.321 47.619 0.00 0.00 0.00 2.29
363 364 1.133915 AGGCGGGTGTTTGAAGAGAAA 60.134 47.619 0.00 0.00 0.00 2.52
364 365 0.472471 AGGCGGGTGTTTGAAGAGAA 59.528 50.000 0.00 0.00 0.00 2.87
365 366 0.034896 GAGGCGGGTGTTTGAAGAGA 59.965 55.000 0.00 0.00 0.00 3.10
366 367 0.955919 GGAGGCGGGTGTTTGAAGAG 60.956 60.000 0.00 0.00 0.00 2.85
367 368 1.072505 GGAGGCGGGTGTTTGAAGA 59.927 57.895 0.00 0.00 0.00 2.87
368 369 1.073199 AGGAGGCGGGTGTTTGAAG 59.927 57.895 0.00 0.00 0.00 3.02
369 370 1.228124 CAGGAGGCGGGTGTTTGAA 60.228 57.895 0.00 0.00 0.00 2.69
370 371 2.429930 CAGGAGGCGGGTGTTTGA 59.570 61.111 0.00 0.00 0.00 2.69
371 372 2.672996 CCAGGAGGCGGGTGTTTG 60.673 66.667 0.00 0.00 0.00 2.93
372 373 2.852075 TCCAGGAGGCGGGTGTTT 60.852 61.111 0.00 0.00 33.74 2.83
373 374 3.322466 CTCCAGGAGGCGGGTGTT 61.322 66.667 8.88 0.00 33.74 3.32
374 375 4.316823 TCTCCAGGAGGCGGGTGT 62.317 66.667 17.10 0.00 33.74 4.16
375 376 3.465403 CTCTCCAGGAGGCGGGTG 61.465 72.222 17.10 0.00 38.35 4.61
376 377 2.537714 ATTCTCTCCAGGAGGCGGGT 62.538 60.000 17.10 0.00 42.10 5.28
377 378 1.753368 GATTCTCTCCAGGAGGCGGG 61.753 65.000 17.10 5.15 42.10 6.13
378 379 0.758685 AGATTCTCTCCAGGAGGCGG 60.759 60.000 17.10 7.54 42.10 6.13
379 380 0.673437 GAGATTCTCTCCAGGAGGCG 59.327 60.000 17.10 8.36 42.10 5.52
380 381 0.673437 CGAGATTCTCTCCAGGAGGC 59.327 60.000 17.10 1.82 40.34 4.70
381 382 0.673437 GCGAGATTCTCTCCAGGAGG 59.327 60.000 17.10 7.57 40.34 4.30
382 383 1.691196 AGCGAGATTCTCTCCAGGAG 58.309 55.000 10.70 10.70 40.34 3.69
383 384 2.028130 GAAGCGAGATTCTCTCCAGGA 58.972 52.381 11.75 0.00 40.34 3.86
384 385 1.068434 GGAAGCGAGATTCTCTCCAGG 59.932 57.143 11.75 0.00 40.34 4.45
385 386 1.068434 GGGAAGCGAGATTCTCTCCAG 59.932 57.143 17.57 3.25 40.34 3.86
386 387 1.115467 GGGAAGCGAGATTCTCTCCA 58.885 55.000 17.57 0.00 40.34 3.86
387 388 1.408969 AGGGAAGCGAGATTCTCTCC 58.591 55.000 11.75 11.10 40.34 3.71
388 389 3.192633 GGATAGGGAAGCGAGATTCTCTC 59.807 52.174 6.76 3.85 39.30 3.20
389 390 3.161866 GGATAGGGAAGCGAGATTCTCT 58.838 50.000 8.59 8.59 42.68 3.10
390 391 2.894126 TGGATAGGGAAGCGAGATTCTC 59.106 50.000 3.43 3.43 0.00 2.87
391 392 2.964209 TGGATAGGGAAGCGAGATTCT 58.036 47.619 1.05 0.00 0.00 2.40
392 393 3.753294 TTGGATAGGGAAGCGAGATTC 57.247 47.619 0.00 0.00 0.00 2.52
393 394 3.433740 GGTTTGGATAGGGAAGCGAGATT 60.434 47.826 0.00 0.00 0.00 2.40
394 395 2.104963 GGTTTGGATAGGGAAGCGAGAT 59.895 50.000 0.00 0.00 0.00 2.75
395 396 1.485066 GGTTTGGATAGGGAAGCGAGA 59.515 52.381 0.00 0.00 0.00 4.04
396 397 1.486726 AGGTTTGGATAGGGAAGCGAG 59.513 52.381 0.00 0.00 0.00 5.03
397 398 1.580059 AGGTTTGGATAGGGAAGCGA 58.420 50.000 0.00 0.00 0.00 4.93
398 399 2.434702 AGTAGGTTTGGATAGGGAAGCG 59.565 50.000 0.00 0.00 0.00 4.68
399 400 4.505324 AAGTAGGTTTGGATAGGGAAGC 57.495 45.455 0.00 0.00 0.00 3.86
400 401 6.047231 CGTAAAGTAGGTTTGGATAGGGAAG 58.953 44.000 0.00 0.00 0.00 3.46
401 402 5.484998 ACGTAAAGTAGGTTTGGATAGGGAA 59.515 40.000 0.00 0.00 0.00 3.97
402 403 5.025453 ACGTAAAGTAGGTTTGGATAGGGA 58.975 41.667 0.00 0.00 0.00 4.20
403 404 5.105228 TGACGTAAAGTAGGTTTGGATAGGG 60.105 44.000 0.00 0.00 0.00 3.53
404 405 5.969423 TGACGTAAAGTAGGTTTGGATAGG 58.031 41.667 0.00 0.00 0.00 2.57
405 406 9.408069 GATATGACGTAAAGTAGGTTTGGATAG 57.592 37.037 0.00 0.00 0.00 2.08
406 407 8.362639 GGATATGACGTAAAGTAGGTTTGGATA 58.637 37.037 0.00 0.00 0.00 2.59
407 408 7.215085 GGATATGACGTAAAGTAGGTTTGGAT 58.785 38.462 0.00 0.00 0.00 3.41
408 409 6.576185 GGATATGACGTAAAGTAGGTTTGGA 58.424 40.000 0.00 0.00 0.00 3.53
409 410 5.461078 CGGATATGACGTAAAGTAGGTTTGG 59.539 44.000 0.00 0.00 0.00 3.28
410 411 6.267817 TCGGATATGACGTAAAGTAGGTTTG 58.732 40.000 0.00 0.00 0.00 2.93
411 412 6.455360 TCGGATATGACGTAAAGTAGGTTT 57.545 37.500 0.00 0.00 0.00 3.27
412 413 6.645790 ATCGGATATGACGTAAAGTAGGTT 57.354 37.500 0.00 0.00 0.00 3.50
413 414 6.489361 AGAATCGGATATGACGTAAAGTAGGT 59.511 38.462 0.00 0.00 0.00 3.08
414 415 6.910995 AGAATCGGATATGACGTAAAGTAGG 58.089 40.000 0.00 0.00 0.00 3.18
415 416 8.501580 TGTAGAATCGGATATGACGTAAAGTAG 58.498 37.037 0.00 0.00 0.00 2.57
416 417 8.382030 TGTAGAATCGGATATGACGTAAAGTA 57.618 34.615 0.00 0.00 0.00 2.24
417 418 7.268199 TGTAGAATCGGATATGACGTAAAGT 57.732 36.000 0.00 0.00 0.00 2.66
418 419 7.273598 CCATGTAGAATCGGATATGACGTAAAG 59.726 40.741 0.00 0.00 0.00 1.85
419 420 7.088272 CCATGTAGAATCGGATATGACGTAAA 58.912 38.462 0.00 0.00 0.00 2.01
420 421 6.617879 CCATGTAGAATCGGATATGACGTAA 58.382 40.000 0.00 0.00 0.00 3.18
421 422 5.392703 GCCATGTAGAATCGGATATGACGTA 60.393 44.000 0.00 0.00 0.00 3.57
422 423 4.618460 GCCATGTAGAATCGGATATGACGT 60.618 45.833 0.00 0.00 0.00 4.34
423 424 3.859961 GCCATGTAGAATCGGATATGACG 59.140 47.826 0.00 0.00 0.00 4.35
424 425 4.820897 TGCCATGTAGAATCGGATATGAC 58.179 43.478 0.00 0.00 0.00 3.06
425 426 5.395657 GGATGCCATGTAGAATCGGATATGA 60.396 44.000 0.00 0.00 0.00 2.15
426 427 4.813161 GGATGCCATGTAGAATCGGATATG 59.187 45.833 0.00 0.00 0.00 1.78
427 428 4.471025 TGGATGCCATGTAGAATCGGATAT 59.529 41.667 0.00 0.00 0.00 1.63
428 429 3.837731 TGGATGCCATGTAGAATCGGATA 59.162 43.478 0.00 0.00 0.00 2.59
429 430 2.639347 TGGATGCCATGTAGAATCGGAT 59.361 45.455 0.00 0.00 0.00 4.18
430 431 2.046292 TGGATGCCATGTAGAATCGGA 58.954 47.619 0.00 0.00 0.00 4.55
431 432 2.549064 TGGATGCCATGTAGAATCGG 57.451 50.000 0.00 0.00 0.00 4.18
432 433 3.304257 GCTTTGGATGCCATGTAGAATCG 60.304 47.826 0.00 0.00 31.53 3.34
433 434 3.633525 TGCTTTGGATGCCATGTAGAATC 59.366 43.478 0.00 0.00 31.53 2.52
434 435 3.634504 TGCTTTGGATGCCATGTAGAAT 58.365 40.909 0.00 0.00 31.53 2.40
435 436 3.084536 TGCTTTGGATGCCATGTAGAA 57.915 42.857 0.00 0.00 31.53 2.10
436 437 2.804986 TGCTTTGGATGCCATGTAGA 57.195 45.000 0.00 0.00 31.53 2.59
437 438 2.953648 TGATGCTTTGGATGCCATGTAG 59.046 45.455 0.00 0.00 31.53 2.74
438 439 2.689471 GTGATGCTTTGGATGCCATGTA 59.311 45.455 0.00 0.00 31.53 2.29
439 440 1.479323 GTGATGCTTTGGATGCCATGT 59.521 47.619 0.00 0.00 31.53 3.21
440 441 1.202486 GGTGATGCTTTGGATGCCATG 60.202 52.381 0.00 0.00 31.53 3.66
441 442 1.117150 GGTGATGCTTTGGATGCCAT 58.883 50.000 0.00 0.00 31.53 4.40
442 443 0.040058 AGGTGATGCTTTGGATGCCA 59.960 50.000 0.00 0.00 0.00 4.92
443 444 1.134907 CAAGGTGATGCTTTGGATGCC 60.135 52.381 0.00 0.00 31.41 4.40
444 445 1.820519 TCAAGGTGATGCTTTGGATGC 59.179 47.619 0.00 0.00 35.22 3.91
445 446 2.426024 CCTCAAGGTGATGCTTTGGATG 59.574 50.000 0.00 0.00 35.22 3.51
446 447 2.731572 CCTCAAGGTGATGCTTTGGAT 58.268 47.619 0.00 0.00 35.22 3.41
447 448 1.887956 GCCTCAAGGTGATGCTTTGGA 60.888 52.381 0.00 0.00 35.54 3.53
448 449 0.529378 GCCTCAAGGTGATGCTTTGG 59.471 55.000 0.00 0.00 35.54 3.28
449 450 1.542492 AGCCTCAAGGTGATGCTTTG 58.458 50.000 2.62 0.00 44.11 2.77
450 451 3.285484 CATAGCCTCAAGGTGATGCTTT 58.715 45.455 12.29 3.60 44.11 3.51
451 452 2.928334 CATAGCCTCAAGGTGATGCTT 58.072 47.619 12.29 0.63 44.11 3.91
453 454 0.950116 GCATAGCCTCAAGGTGATGC 59.050 55.000 16.47 16.47 43.18 3.91
454 455 2.336945 TGCATAGCCTCAAGGTGATG 57.663 50.000 0.00 3.41 37.57 3.07
455 456 3.220110 CAATGCATAGCCTCAAGGTGAT 58.780 45.455 0.00 0.00 37.57 3.06
456 457 2.025981 ACAATGCATAGCCTCAAGGTGA 60.026 45.455 0.00 0.00 37.57 4.02
457 458 2.372264 ACAATGCATAGCCTCAAGGTG 58.628 47.619 0.00 0.00 37.57 4.00
458 459 2.814805 ACAATGCATAGCCTCAAGGT 57.185 45.000 0.00 0.00 37.57 3.50
459 460 3.544684 TGTACAATGCATAGCCTCAAGG 58.455 45.455 0.00 0.00 38.53 3.61
460 461 4.556104 GCATGTACAATGCATAGCCTCAAG 60.556 45.833 19.12 0.00 44.00 3.02
461 462 3.316029 GCATGTACAATGCATAGCCTCAA 59.684 43.478 19.12 0.00 44.00 3.02
462 463 2.880268 GCATGTACAATGCATAGCCTCA 59.120 45.455 19.12 0.00 44.00 3.86
463 464 3.144506 AGCATGTACAATGCATAGCCTC 58.855 45.455 23.27 0.00 46.77 4.70
464 465 3.144506 GAGCATGTACAATGCATAGCCT 58.855 45.455 23.27 8.98 46.77 4.58
465 466 3.144506 AGAGCATGTACAATGCATAGCC 58.855 45.455 23.27 12.01 46.77 3.93
466 467 5.929697 TTAGAGCATGTACAATGCATAGC 57.070 39.130 23.27 13.81 46.77 2.97
467 468 6.072838 CCCTTTAGAGCATGTACAATGCATAG 60.073 42.308 23.27 15.03 46.77 2.23
468 469 5.764686 CCCTTTAGAGCATGTACAATGCATA 59.235 40.000 23.27 15.94 46.77 3.14
469 470 4.581824 CCCTTTAGAGCATGTACAATGCAT 59.418 41.667 23.27 16.63 46.77 3.96
470 471 3.947196 CCCTTTAGAGCATGTACAATGCA 59.053 43.478 23.27 0.00 46.77 3.96
471 472 3.947834 ACCCTTTAGAGCATGTACAATGC 59.052 43.478 17.36 17.36 44.85 3.56
472 473 4.271049 CGACCCTTTAGAGCATGTACAATG 59.729 45.833 0.00 0.12 0.00 2.82
473 474 4.442706 CGACCCTTTAGAGCATGTACAAT 58.557 43.478 0.00 0.00 0.00 2.71
474 475 3.369052 CCGACCCTTTAGAGCATGTACAA 60.369 47.826 0.00 0.00 0.00 2.41
475 476 2.167693 CCGACCCTTTAGAGCATGTACA 59.832 50.000 0.00 0.00 0.00 2.90
476 477 2.822764 CCGACCCTTTAGAGCATGTAC 58.177 52.381 0.00 0.00 0.00 2.90
477 478 1.138266 GCCGACCCTTTAGAGCATGTA 59.862 52.381 0.00 0.00 0.00 2.29
478 479 0.107654 GCCGACCCTTTAGAGCATGT 60.108 55.000 0.00 0.00 0.00 3.21
479 480 0.107703 TGCCGACCCTTTAGAGCATG 60.108 55.000 0.00 0.00 0.00 4.06
480 481 0.618458 TTGCCGACCCTTTAGAGCAT 59.382 50.000 0.00 0.00 0.00 3.79
481 482 0.321298 GTTGCCGACCCTTTAGAGCA 60.321 55.000 0.00 0.00 0.00 4.26
482 483 1.025113 GGTTGCCGACCCTTTAGAGC 61.025 60.000 0.00 0.00 43.06 4.09
483 484 3.154589 GGTTGCCGACCCTTTAGAG 57.845 57.895 0.00 0.00 43.06 2.43
503 504 3.195698 GGCGTTCGGGAGATGCAC 61.196 66.667 0.00 0.00 40.93 4.57
757 758 2.883828 CGTTGCCCAGACCAGAGGT 61.884 63.158 0.00 0.00 39.44 3.85
881 897 0.174845 TTGACGAGCGATTAGGTGGG 59.825 55.000 0.00 0.00 0.00 4.61
939 955 2.600867 GAGAGAGAAGAAAATGGACGCG 59.399 50.000 3.53 3.53 0.00 6.01
942 958 6.378280 AGAGAGAGAGAGAGAAGAAAATGGAC 59.622 42.308 0.00 0.00 0.00 4.02
946 962 6.540189 CGAGAGAGAGAGAGAGAGAAGAAAAT 59.460 42.308 0.00 0.00 0.00 1.82
967 983 4.465446 CCTCCCCTCTGGCCGAGA 62.465 72.222 21.43 13.64 42.62 4.04
971 987 2.368878 ATTCCCTCCCCTCTGGCC 60.369 66.667 0.00 0.00 0.00 5.36
972 988 2.812619 CGATTCCCTCCCCTCTGGC 61.813 68.421 0.00 0.00 0.00 4.85
973 989 1.075226 TCGATTCCCTCCCCTCTGG 60.075 63.158 0.00 0.00 0.00 3.86
974 990 1.118356 CCTCGATTCCCTCCCCTCTG 61.118 65.000 0.00 0.00 0.00 3.35
975 991 1.234529 CCTCGATTCCCTCCCCTCT 59.765 63.158 0.00 0.00 0.00 3.69
1522 1779 4.367023 GTGGTACTGTGCGGGCGA 62.367 66.667 0.00 0.00 0.00 5.54
1638 1904 2.125391 GCAGCGTCAGAGATGCCA 60.125 61.111 7.54 0.00 46.63 4.92
1653 1919 1.100463 TTTCAGCTTGGCAAGACGCA 61.100 50.000 30.45 7.95 45.17 5.24
1656 1922 1.806542 TCGATTTCAGCTTGGCAAGAC 59.193 47.619 30.45 20.20 0.00 3.01
2178 2444 2.603075 TCCTGGCTGTGGCTTTATTT 57.397 45.000 0.00 0.00 38.73 1.40
2883 3149 1.399855 CCACGGCGACATATCTCGTAG 60.400 57.143 16.62 0.00 35.99 3.51
2911 3177 1.291132 GCTACTCTCCGAACCAATGC 58.709 55.000 0.00 0.00 0.00 3.56
2952 3218 6.760298 CAGTGAGCATGATGTTCTGTATTACT 59.240 38.462 10.57 1.94 0.00 2.24
2979 3245 0.601576 TCTTCTTGGCGCGCTTTGTA 60.602 50.000 32.29 12.97 0.00 2.41
3060 3326 1.347707 TCAACCACCCTCAAGCTAGTG 59.652 52.381 0.00 0.00 0.00 2.74
3386 3660 4.378459 CCTTCCAAGCTTCATACGAAACAC 60.378 45.833 0.00 0.00 0.00 3.32
3595 6423 7.513190 ACTACTACAACTTACGTAGTACTCG 57.487 40.000 0.00 5.91 45.95 4.18
3609 6437 6.362820 GTGCAAGTCTCTGTAACTACTACAAC 59.637 42.308 0.00 0.00 40.06 3.32
3610 6438 6.040054 TGTGCAAGTCTCTGTAACTACTACAA 59.960 38.462 0.00 0.00 40.06 2.41
3611 6439 5.533528 TGTGCAAGTCTCTGTAACTACTACA 59.466 40.000 0.00 0.00 38.23 2.74
3614 6442 5.730296 ATGTGCAAGTCTCTGTAACTACT 57.270 39.130 0.00 0.00 0.00 2.57
4087 6921 2.885616 TGAAACGGAGGGAGTACTTCT 58.114 47.619 0.01 0.06 0.00 2.85
4155 6989 1.228644 TCTTCACCGGACGAAGGGA 60.229 57.895 26.95 13.96 40.27 4.20
4156 6990 1.215647 CTCTTCACCGGACGAAGGG 59.784 63.158 26.95 23.36 40.27 3.95
4157 6991 0.388649 CACTCTTCACCGGACGAAGG 60.389 60.000 26.95 21.59 40.27 3.46
4158 6992 0.314302 ACACTCTTCACCGGACGAAG 59.686 55.000 23.86 23.86 41.05 3.79
4159 6993 2.422303 ACACTCTTCACCGGACGAA 58.578 52.632 9.46 9.84 0.00 3.85
4160 6994 4.169271 ACACTCTTCACCGGACGA 57.831 55.556 9.46 0.01 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.