Multiple sequence alignment - TraesCS6A01G190300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G190300 chr6A 100.000 3755 0 0 1 3755 250833839 250837593 0.000000e+00 6935.0
1 TraesCS6A01G190300 chr6A 93.284 134 5 4 652 784 55731055 55730925 1.060000e-45 195.0
2 TraesCS6A01G190300 chrUn 95.777 1113 27 9 781 1875 9990259 9991369 0.000000e+00 1777.0
3 TraesCS6A01G190300 chrUn 94.747 514 23 3 3187 3696 468385963 468385450 0.000000e+00 797.0
4 TraesCS6A01G190300 chrUn 94.747 514 23 3 3187 3696 468386795 468386282 0.000000e+00 797.0
5 TraesCS6A01G190300 chrUn 84.475 219 30 4 143 359 96554870 96555086 2.940000e-51 213.0
6 TraesCS6A01G190300 chr7B 94.808 1117 31 11 781 1878 245856168 245855060 0.000000e+00 1716.0
7 TraesCS6A01G190300 chr7B 94.097 1118 41 10 781 1875 732545596 732546711 0.000000e+00 1676.0
8 TraesCS6A01G190300 chr7B 94.007 1118 42 10 781 1875 732529006 732530121 0.000000e+00 1670.0
9 TraesCS6A01G190300 chr7B 93.415 1139 43 9 2563 3696 286043945 286042834 0.000000e+00 1659.0
10 TraesCS6A01G190300 chr7B 93.801 1113 44 14 781 1878 286046276 286045174 0.000000e+00 1650.0
11 TraesCS6A01G190300 chr7B 93.118 1148 40 8 2563 3696 732547948 732549070 0.000000e+00 1648.0
12 TraesCS6A01G190300 chr7B 96.751 708 22 1 1860 2566 732530618 732531325 0.000000e+00 1179.0
13 TraesCS6A01G190300 chr7B 96.751 708 22 1 1860 2566 732547208 732547915 0.000000e+00 1179.0
14 TraesCS6A01G190300 chr7B 96.062 711 22 3 1860 2569 286044680 286043975 0.000000e+00 1153.0
15 TraesCS6A01G190300 chr7B 90.582 361 31 3 1 359 399362307 399361948 3.390000e-130 475.0
16 TraesCS6A01G190300 chr7B 100.000 129 0 0 356 484 732528784 732528912 4.850000e-59 239.0
17 TraesCS6A01G190300 chr7B 100.000 129 0 0 356 484 732545374 732545502 4.850000e-59 239.0
18 TraesCS6A01G190300 chr7B 99.225 129 1 0 356 484 286046498 286046370 2.260000e-57 233.0
19 TraesCS6A01G190300 chr7B 99.107 112 1 0 673 784 559142190 559142301 6.360000e-48 202.0
20 TraesCS6A01G190300 chr7B 96.970 99 1 1 581 679 732528913 732529009 8.340000e-37 165.0
21 TraesCS6A01G190300 chr7B 96.970 99 1 1 581 679 732545503 732545599 8.340000e-37 165.0
22 TraesCS6A01G190300 chr7B 91.964 112 5 4 581 690 286046369 286046260 1.810000e-33 154.0
23 TraesCS6A01G190300 chr2B 94.817 1119 26 11 781 1878 725736653 725735546 0.000000e+00 1716.0
24 TraesCS6A01G190300 chr2B 93.591 1139 44 6 2563 3696 729178344 729177230 0.000000e+00 1672.0
25 TraesCS6A01G190300 chr2B 96.473 482 14 1 2088 2569 729178852 729178374 0.000000e+00 793.0
26 TraesCS6A01G190300 chr2B 93.407 364 18 3 1 359 760747441 760747803 5.520000e-148 534.0
27 TraesCS6A01G190300 chr2B 84.878 410 51 7 2093 2492 231221323 231220915 1.620000e-108 403.0
28 TraesCS6A01G190300 chr2B 99.225 129 1 0 356 484 729179036 729178908 2.260000e-57 233.0
29 TraesCS6A01G190300 chr2B 98.276 58 1 0 581 638 729178907 729178850 6.640000e-18 102.0
30 TraesCS6A01G190300 chr6B 94.375 1120 39 9 781 1878 31790405 31789288 0.000000e+00 1698.0
31 TraesCS6A01G190300 chr6B 93.321 1063 42 6 2563 3620 31788054 31787016 0.000000e+00 1543.0
32 TraesCS6A01G190300 chr6B 96.203 711 26 1 1860 2569 31788794 31788084 0.000000e+00 1162.0
33 TraesCS6A01G190300 chr6B 100.000 129 0 0 356 484 31790627 31790499 4.850000e-59 239.0
34 TraesCS6A01G190300 chr6B 95.960 99 2 1 581 679 31790498 31790402 3.880000e-35 159.0
35 TraesCS6A01G190300 chr3B 94.212 1123 38 9 781 1878 406536012 406534892 0.000000e+00 1688.0
36 TraesCS6A01G190300 chr3B 95.328 792 25 5 2909 3696 406519608 406518825 0.000000e+00 1247.0
37 TraesCS6A01G190300 chr3B 94.685 715 32 4 1860 2569 406534398 406533685 0.000000e+00 1105.0
38 TraesCS6A01G190300 chr3B 100.000 129 0 0 356 484 406536234 406536106 4.850000e-59 239.0
39 TraesCS6A01G190300 chr3B 95.960 99 2 1 581 679 406536105 406536009 3.880000e-35 159.0
40 TraesCS6A01G190300 chr3B 92.857 56 4 0 3700 3755 406518571 406518516 8.640000e-12 82.4
41 TraesCS6A01G190300 chr3D 90.106 940 66 13 2576 3489 67057490 67058428 0.000000e+00 1195.0
42 TraesCS6A01G190300 chr3D 88.655 952 72 17 2563 3489 184443187 184442247 0.000000e+00 1127.0
43 TraesCS6A01G190300 chr3D 82.178 404 58 8 2093 2492 112963119 112963512 6.010000e-88 335.0
44 TraesCS6A01G190300 chr3D 98.276 116 2 0 670 785 572127423 572127538 1.770000e-48 204.0
45 TraesCS6A01G190300 chr3D 95.935 123 4 1 664 786 302930182 302930303 8.230000e-47 198.0
46 TraesCS6A01G190300 chr2D 90.085 938 66 13 2578 3489 377263036 377263972 0.000000e+00 1192.0
47 TraesCS6A01G190300 chr2D 90.000 940 67 13 2576 3489 578030503 578029565 0.000000e+00 1190.0
48 TraesCS6A01G190300 chr2D 88.340 952 76 16 2563 3489 488886451 488885510 0.000000e+00 1110.0
49 TraesCS6A01G190300 chr2D 89.418 378 33 4 1 371 365767424 365767047 1.580000e-128 470.0
50 TraesCS6A01G190300 chr7D 90.000 940 67 13 2576 3489 553411708 553410770 0.000000e+00 1190.0
51 TraesCS6A01G190300 chr7D 88.118 951 75 18 2564 3489 40143487 40142550 0.000000e+00 1096.0
52 TraesCS6A01G190300 chr7D 91.877 357 27 2 1 355 177232715 177233071 7.240000e-137 497.0
53 TraesCS6A01G190300 chr2A 89.894 940 67 14 2576 3489 2617179 2618116 0.000000e+00 1184.0
54 TraesCS6A01G190300 chr2A 84.878 205 21 6 1926 2121 751761695 751761492 8.230000e-47 198.0
55 TraesCS6A01G190300 chr5D 88.655 952 73 16 2563 3489 432014123 432013182 0.000000e+00 1127.0
56 TraesCS6A01G190300 chr5D 82.192 146 17 9 3530 3670 437769122 437769263 2.370000e-22 117.0
57 TraesCS6A01G190300 chr1B 93.904 607 18 6 1268 1864 416584277 416583680 0.000000e+00 898.0
58 TraesCS6A01G190300 chr4B 87.776 589 56 7 1919 2493 382401909 382401323 0.000000e+00 675.0
59 TraesCS6A01G190300 chr4B 86.598 97 6 6 3575 3670 462223163 462223073 2.390000e-17 100.0
60 TraesCS6A01G190300 chr3A 98.333 360 4 2 1 359 218163390 218163748 6.840000e-177 630.0
61 TraesCS6A01G190300 chr3A 93.846 130 5 3 673 800 673617462 673617334 3.830000e-45 193.0
62 TraesCS6A01G190300 chr5A 90.515 369 30 5 1 366 552079350 552078984 2.030000e-132 483.0
63 TraesCS6A01G190300 chr5A 86.818 220 29 0 143 362 109290193 109290412 2.900000e-61 246.0
64 TraesCS6A01G190300 chr5A 97.479 119 1 2 678 794 306879121 306879003 6.360000e-48 202.0
65 TraesCS6A01G190300 chr5A 96.032 126 1 3 678 801 528581280 528581403 6.360000e-48 202.0
66 TraesCS6A01G190300 chr5A 93.382 136 4 5 650 784 664849625 664849494 2.960000e-46 196.0
67 TraesCS6A01G190300 chr1D 88.435 294 30 2 72 361 282719241 282718948 5.970000e-93 351.0
68 TraesCS6A01G190300 chr1D 92.424 66 4 1 19 83 282721865 282721800 3.990000e-15 93.5
69 TraesCS6A01G190300 chr1A 85.366 205 20 6 1926 2121 489267970 489268173 1.770000e-48 204.0
70 TraesCS6A01G190300 chr1A 98.276 116 2 0 671 786 534536611 534536496 1.770000e-48 204.0
71 TraesCS6A01G190300 chr5B 89.815 108 6 5 1926 2028 691753607 691753500 2.350000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G190300 chr6A 250833839 250837593 3754 False 6935.00 6935 100.00000 1 3755 1 chr6A.!!$F1 3754
1 TraesCS6A01G190300 chrUn 9990259 9991369 1110 False 1777.00 1777 95.77700 781 1875 1 chrUn.!!$F1 1094
2 TraesCS6A01G190300 chrUn 468385450 468386795 1345 True 797.00 797 94.74700 3187 3696 2 chrUn.!!$R1 509
3 TraesCS6A01G190300 chr7B 245855060 245856168 1108 True 1716.00 1716 94.80800 781 1878 1 chr7B.!!$R1 1097
4 TraesCS6A01G190300 chr7B 732545374 732549070 3696 False 981.40 1676 96.18720 356 3696 5 chr7B.!!$F3 3340
5 TraesCS6A01G190300 chr7B 286042834 286046498 3664 True 969.80 1659 94.89340 356 3696 5 chr7B.!!$R3 3340
6 TraesCS6A01G190300 chr7B 732528784 732531325 2541 False 813.25 1670 96.93200 356 2566 4 chr7B.!!$F2 2210
7 TraesCS6A01G190300 chr2B 725735546 725736653 1107 True 1716.00 1716 94.81700 781 1878 1 chr2B.!!$R2 1097
8 TraesCS6A01G190300 chr2B 729177230 729179036 1806 True 700.00 1672 96.89125 356 3696 4 chr2B.!!$R3 3340
9 TraesCS6A01G190300 chr6B 31787016 31790627 3611 True 960.20 1698 95.97180 356 3620 5 chr6B.!!$R1 3264
10 TraesCS6A01G190300 chr3B 406533685 406536234 2549 True 797.75 1688 96.21425 356 2569 4 chr3B.!!$R2 2213
11 TraesCS6A01G190300 chr3B 406518516 406519608 1092 True 664.70 1247 94.09250 2909 3755 2 chr3B.!!$R1 846
12 TraesCS6A01G190300 chr3D 67057490 67058428 938 False 1195.00 1195 90.10600 2576 3489 1 chr3D.!!$F1 913
13 TraesCS6A01G190300 chr3D 184442247 184443187 940 True 1127.00 1127 88.65500 2563 3489 1 chr3D.!!$R1 926
14 TraesCS6A01G190300 chr2D 377263036 377263972 936 False 1192.00 1192 90.08500 2578 3489 1 chr2D.!!$F1 911
15 TraesCS6A01G190300 chr2D 578029565 578030503 938 True 1190.00 1190 90.00000 2576 3489 1 chr2D.!!$R3 913
16 TraesCS6A01G190300 chr2D 488885510 488886451 941 True 1110.00 1110 88.34000 2563 3489 1 chr2D.!!$R2 926
17 TraesCS6A01G190300 chr7D 553410770 553411708 938 True 1190.00 1190 90.00000 2576 3489 1 chr7D.!!$R2 913
18 TraesCS6A01G190300 chr7D 40142550 40143487 937 True 1096.00 1096 88.11800 2564 3489 1 chr7D.!!$R1 925
19 TraesCS6A01G190300 chr2A 2617179 2618116 937 False 1184.00 1184 89.89400 2576 3489 1 chr2A.!!$F1 913
20 TraesCS6A01G190300 chr5D 432013182 432014123 941 True 1127.00 1127 88.65500 2563 3489 1 chr5D.!!$R1 926
21 TraesCS6A01G190300 chr1B 416583680 416584277 597 True 898.00 898 93.90400 1268 1864 1 chr1B.!!$R1 596
22 TraesCS6A01G190300 chr4B 382401323 382401909 586 True 675.00 675 87.77600 1919 2493 1 chr4B.!!$R1 574
23 TraesCS6A01G190300 chr1D 282718948 282721865 2917 True 222.25 351 90.42950 19 361 2 chr1D.!!$R1 342

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
283 285 0.031721 CTCGTACCGAACATAGGGCC 59.968 60.0 0.00 0.0 34.74 5.80 F
291 293 0.034863 GAACATAGGGCCGGAACCAA 60.035 55.0 5.05 0.0 0.00 3.67 F
340 342 0.105964 TCCGTGACAGTTGGTTCCTG 59.894 55.0 0.00 0.0 36.01 3.86 F
687 689 0.173708 GCTGACAAGTACTCCCTCCG 59.826 60.0 0.00 0.0 0.00 4.63 F
2235 4255 0.174845 TGGCCTTGTATTCTCGTCCG 59.825 55.0 3.32 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1513 2808 1.143838 CTGGTCAATCGATCCGCCA 59.856 57.895 0.00 6.5 0.00 5.69 R
2279 4303 4.147219 AGAAAGTGCTTAACGATGCAAC 57.853 40.909 0.00 0.0 41.10 4.17 R
2301 4334 8.518430 AACATACACCTATTGCATGTTATTCA 57.482 30.769 1.76 0.0 46.34 2.57 R
2396 4429 5.117440 TGCAGTTTGTTTATGTACGTACGAG 59.883 40.000 24.41 0.0 0.00 4.18 R
3507 6608 0.117742 AGGGGAGGTTCCGGTTCTTA 59.882 55.000 0.00 0.0 37.43 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.884816 GTGTTCTATGCTGTTCAAACTAGTA 57.115 36.000 0.00 0.00 0.00 1.82
26 27 6.872020 TGTTCTATGCTGTTCAAACTAGTACC 59.128 38.462 0.00 0.00 0.00 3.34
27 28 6.599356 TCTATGCTGTTCAAACTAGTACCA 57.401 37.500 0.00 0.00 0.00 3.25
83 85 6.389906 AGTAAAATAGGCACACTCAAATTGC 58.610 36.000 0.00 0.00 35.40 3.56
84 86 5.473066 AAAATAGGCACACTCAAATTGCT 57.527 34.783 0.00 0.00 36.46 3.91
85 87 6.588719 AAAATAGGCACACTCAAATTGCTA 57.411 33.333 0.00 0.00 36.46 3.49
86 88 6.780457 AAATAGGCACACTCAAATTGCTAT 57.220 33.333 0.00 0.00 36.46 2.97
87 89 6.780457 AATAGGCACACTCAAATTGCTATT 57.220 33.333 0.00 0.00 36.46 1.73
88 90 4.445452 AGGCACACTCAAATTGCTATTG 57.555 40.909 0.00 0.00 36.46 1.90
89 91 3.828451 AGGCACACTCAAATTGCTATTGT 59.172 39.130 0.00 0.00 36.46 2.71
90 92 4.082571 AGGCACACTCAAATTGCTATTGTC 60.083 41.667 0.00 0.00 36.46 3.18
91 93 4.082571 GGCACACTCAAATTGCTATTGTCT 60.083 41.667 0.00 0.00 36.46 3.41
92 94 4.855388 GCACACTCAAATTGCTATTGTCTG 59.145 41.667 0.00 0.00 33.26 3.51
93 95 4.855388 CACACTCAAATTGCTATTGTCTGC 59.145 41.667 0.00 0.00 0.00 4.26
94 96 4.763793 ACACTCAAATTGCTATTGTCTGCT 59.236 37.500 0.00 0.00 0.00 4.24
95 97 5.939883 ACACTCAAATTGCTATTGTCTGCTA 59.060 36.000 0.00 0.00 0.00 3.49
96 98 6.128172 ACACTCAAATTGCTATTGTCTGCTAC 60.128 38.462 0.00 0.00 0.00 3.58
97 99 6.093219 CACTCAAATTGCTATTGTCTGCTACT 59.907 38.462 0.00 0.00 0.00 2.57
98 100 6.314896 ACTCAAATTGCTATTGTCTGCTACTC 59.685 38.462 0.00 0.00 0.00 2.59
99 101 5.586243 TCAAATTGCTATTGTCTGCTACTCC 59.414 40.000 0.00 0.00 0.00 3.85
100 102 5.365021 AATTGCTATTGTCTGCTACTCCT 57.635 39.130 0.00 0.00 0.00 3.69
101 103 6.485830 AATTGCTATTGTCTGCTACTCCTA 57.514 37.500 0.00 0.00 0.00 2.94
102 104 4.920640 TGCTATTGTCTGCTACTCCTAC 57.079 45.455 0.00 0.00 0.00 3.18
103 105 4.278310 TGCTATTGTCTGCTACTCCTACA 58.722 43.478 0.00 0.00 0.00 2.74
104 106 4.895889 TGCTATTGTCTGCTACTCCTACAT 59.104 41.667 0.00 0.00 0.00 2.29
105 107 5.010112 TGCTATTGTCTGCTACTCCTACATC 59.990 44.000 0.00 0.00 0.00 3.06
106 108 5.242838 GCTATTGTCTGCTACTCCTACATCT 59.757 44.000 0.00 0.00 0.00 2.90
107 109 6.239176 GCTATTGTCTGCTACTCCTACATCTT 60.239 42.308 0.00 0.00 0.00 2.40
108 110 6.552445 ATTGTCTGCTACTCCTACATCTTT 57.448 37.500 0.00 0.00 0.00 2.52
109 111 5.330455 TGTCTGCTACTCCTACATCTTTG 57.670 43.478 0.00 0.00 0.00 2.77
110 112 4.772624 TGTCTGCTACTCCTACATCTTTGT 59.227 41.667 0.00 0.00 39.98 2.83
111 113 5.949952 TGTCTGCTACTCCTACATCTTTGTA 59.050 40.000 0.00 0.00 37.28 2.41
112 114 6.436218 TGTCTGCTACTCCTACATCTTTGTAA 59.564 38.462 0.00 0.00 37.86 2.41
113 115 7.124298 TGTCTGCTACTCCTACATCTTTGTAAT 59.876 37.037 0.00 0.00 37.86 1.89
114 116 8.630917 GTCTGCTACTCCTACATCTTTGTAATA 58.369 37.037 0.00 0.00 37.86 0.98
115 117 9.197306 TCTGCTACTCCTACATCTTTGTAATAA 57.803 33.333 0.00 0.00 37.86 1.40
116 118 9.988815 CTGCTACTCCTACATCTTTGTAATAAT 57.011 33.333 0.00 0.00 37.86 1.28
126 128 8.451908 ACATCTTTGTAATAATTAGTGGAGCC 57.548 34.615 0.00 0.00 33.16 4.70
127 129 8.052748 ACATCTTTGTAATAATTAGTGGAGCCA 58.947 33.333 0.00 0.00 33.16 4.75
128 130 9.071276 CATCTTTGTAATAATTAGTGGAGCCAT 57.929 33.333 0.00 0.00 0.00 4.40
129 131 9.646522 ATCTTTGTAATAATTAGTGGAGCCATT 57.353 29.630 0.00 0.00 0.00 3.16
130 132 8.902806 TCTTTGTAATAATTAGTGGAGCCATTG 58.097 33.333 0.00 0.00 0.00 2.82
131 133 8.588290 TTTGTAATAATTAGTGGAGCCATTGT 57.412 30.769 0.00 0.00 0.00 2.71
132 134 8.588290 TTGTAATAATTAGTGGAGCCATTGTT 57.412 30.769 0.00 0.00 0.00 2.83
133 135 8.588290 TGTAATAATTAGTGGAGCCATTGTTT 57.412 30.769 0.00 0.00 0.00 2.83
134 136 9.030452 TGTAATAATTAGTGGAGCCATTGTTTT 57.970 29.630 0.00 0.00 0.00 2.43
135 137 9.869757 GTAATAATTAGTGGAGCCATTGTTTTT 57.130 29.630 0.00 0.00 0.00 1.94
140 142 8.831715 ATTAGTGGAGCCATTGTTTTTAAAAG 57.168 30.769 0.14 0.00 0.00 2.27
141 143 5.610398 AGTGGAGCCATTGTTTTTAAAAGG 58.390 37.500 0.14 0.06 0.00 3.11
142 144 5.365314 AGTGGAGCCATTGTTTTTAAAAGGA 59.635 36.000 7.22 0.00 0.00 3.36
143 145 6.043127 AGTGGAGCCATTGTTTTTAAAAGGAT 59.957 34.615 7.22 1.21 0.00 3.24
144 146 6.147656 GTGGAGCCATTGTTTTTAAAAGGATG 59.852 38.462 7.22 9.23 0.00 3.51
145 147 6.183361 TGGAGCCATTGTTTTTAAAAGGATGT 60.183 34.615 7.22 0.00 0.00 3.06
146 148 6.710295 GGAGCCATTGTTTTTAAAAGGATGTT 59.290 34.615 7.22 2.62 0.00 2.71
147 149 7.307930 GGAGCCATTGTTTTTAAAAGGATGTTG 60.308 37.037 7.22 0.90 0.00 3.33
148 150 7.053498 AGCCATTGTTTTTAAAAGGATGTTGT 58.947 30.769 7.22 0.00 0.00 3.32
149 151 7.555914 AGCCATTGTTTTTAAAAGGATGTTGTT 59.444 29.630 7.22 0.00 0.00 2.83
150 152 8.187480 GCCATTGTTTTTAAAAGGATGTTGTTT 58.813 29.630 7.22 0.00 0.00 2.83
154 156 9.508642 TTGTTTTTAAAAGGATGTTGTTTTCCT 57.491 25.926 0.14 0.00 44.35 3.36
160 162 4.751767 AGGATGTTGTTTTCCTTGCAAA 57.248 36.364 0.00 0.00 39.36 3.68
161 163 5.294734 AGGATGTTGTTTTCCTTGCAAAT 57.705 34.783 0.00 0.00 39.36 2.32
162 164 6.418057 AGGATGTTGTTTTCCTTGCAAATA 57.582 33.333 0.00 0.00 39.36 1.40
163 165 7.008021 AGGATGTTGTTTTCCTTGCAAATAT 57.992 32.000 0.00 0.00 39.36 1.28
164 166 8.133024 AGGATGTTGTTTTCCTTGCAAATATA 57.867 30.769 0.00 0.00 39.36 0.86
165 167 8.592809 AGGATGTTGTTTTCCTTGCAAATATAA 58.407 29.630 0.00 0.00 39.36 0.98
166 168 9.213799 GGATGTTGTTTTCCTTGCAAATATAAA 57.786 29.630 0.00 0.00 0.00 1.40
168 170 8.948631 TGTTGTTTTCCTTGCAAATATAAACA 57.051 26.923 17.61 17.61 33.65 2.83
169 171 9.383519 TGTTGTTTTCCTTGCAAATATAAACAA 57.616 25.926 23.37 23.37 39.96 2.83
170 172 9.862585 GTTGTTTTCCTTGCAAATATAAACAAG 57.137 29.630 25.55 6.23 41.68 3.16
171 173 9.823647 TTGTTTTCCTTGCAAATATAAACAAGA 57.176 25.926 23.37 12.58 41.59 3.02
172 174 9.995003 TGTTTTCCTTGCAAATATAAACAAGAT 57.005 25.926 18.53 0.00 41.59 2.40
174 176 8.477984 TTTCCTTGCAAATATAAACAAGATGC 57.522 30.769 0.00 0.00 41.59 3.91
175 177 7.408756 TCCTTGCAAATATAAACAAGATGCT 57.591 32.000 0.00 0.00 41.59 3.79
176 178 7.259882 TCCTTGCAAATATAAACAAGATGCTG 58.740 34.615 0.00 0.00 41.59 4.41
177 179 6.019318 CCTTGCAAATATAAACAAGATGCTGC 60.019 38.462 0.00 0.00 41.59 5.25
178 180 6.211587 TGCAAATATAAACAAGATGCTGCT 57.788 33.333 0.00 0.00 33.66 4.24
179 181 6.037726 TGCAAATATAAACAAGATGCTGCTG 58.962 36.000 0.00 0.00 33.66 4.41
180 182 6.127675 TGCAAATATAAACAAGATGCTGCTGA 60.128 34.615 0.00 0.00 33.66 4.26
181 183 6.753279 GCAAATATAAACAAGATGCTGCTGAA 59.247 34.615 0.00 0.00 0.00 3.02
182 184 7.276218 GCAAATATAAACAAGATGCTGCTGAAA 59.724 33.333 0.00 0.00 0.00 2.69
183 185 9.309516 CAAATATAAACAAGATGCTGCTGAAAT 57.690 29.630 0.00 0.00 0.00 2.17
184 186 9.880157 AAATATAAACAAGATGCTGCTGAAATT 57.120 25.926 0.00 0.00 0.00 1.82
185 187 9.880157 AATATAAACAAGATGCTGCTGAAATTT 57.120 25.926 0.00 0.00 0.00 1.82
186 188 9.880157 ATATAAACAAGATGCTGCTGAAATTTT 57.120 25.926 0.00 0.00 0.00 1.82
187 189 5.917541 AACAAGATGCTGCTGAAATTTTG 57.082 34.783 0.00 0.58 0.00 2.44
188 190 4.952460 ACAAGATGCTGCTGAAATTTTGT 58.048 34.783 0.00 1.21 0.00 2.83
189 191 6.088016 ACAAGATGCTGCTGAAATTTTGTA 57.912 33.333 0.00 0.00 29.69 2.41
190 192 6.694447 ACAAGATGCTGCTGAAATTTTGTAT 58.306 32.000 0.00 0.00 29.69 2.29
191 193 7.156673 ACAAGATGCTGCTGAAATTTTGTATT 58.843 30.769 0.00 0.00 29.69 1.89
192 194 7.658575 ACAAGATGCTGCTGAAATTTTGTATTT 59.341 29.630 0.00 0.00 29.69 1.40
193 195 8.500773 CAAGATGCTGCTGAAATTTTGTATTTT 58.499 29.630 0.00 0.00 0.00 1.82
194 196 8.611654 AGATGCTGCTGAAATTTTGTATTTTT 57.388 26.923 0.00 0.00 0.00 1.94
195 197 8.500773 AGATGCTGCTGAAATTTTGTATTTTTG 58.499 29.630 0.00 0.00 0.00 2.44
196 198 7.783090 TGCTGCTGAAATTTTGTATTTTTGA 57.217 28.000 0.00 0.00 0.00 2.69
197 199 8.380743 TGCTGCTGAAATTTTGTATTTTTGAT 57.619 26.923 0.00 0.00 0.00 2.57
198 200 9.486497 TGCTGCTGAAATTTTGTATTTTTGATA 57.514 25.926 0.00 0.00 0.00 2.15
215 217 5.984233 TTGATATTCCGTTCTTCATTCCG 57.016 39.130 0.00 0.00 0.00 4.30
216 218 5.018539 TGATATTCCGTTCTTCATTCCGT 57.981 39.130 0.00 0.00 0.00 4.69
217 219 4.808895 TGATATTCCGTTCTTCATTCCGTG 59.191 41.667 0.00 0.00 0.00 4.94
218 220 1.153353 TTCCGTTCTTCATTCCGTGC 58.847 50.000 0.00 0.00 0.00 5.34
219 221 0.320374 TCCGTTCTTCATTCCGTGCT 59.680 50.000 0.00 0.00 0.00 4.40
220 222 1.156736 CCGTTCTTCATTCCGTGCTT 58.843 50.000 0.00 0.00 0.00 3.91
221 223 1.128692 CCGTTCTTCATTCCGTGCTTC 59.871 52.381 0.00 0.00 0.00 3.86
222 224 1.128692 CGTTCTTCATTCCGTGCTTCC 59.871 52.381 0.00 0.00 0.00 3.46
223 225 1.128692 GTTCTTCATTCCGTGCTTCCG 59.871 52.381 0.00 0.00 0.00 4.30
231 233 3.110178 CGTGCTTCCGGACCGAAC 61.110 66.667 17.49 1.67 0.00 3.95
232 234 2.029964 GTGCTTCCGGACCGAACA 59.970 61.111 17.49 4.68 0.00 3.18
233 235 2.029964 TGCTTCCGGACCGAACAC 59.970 61.111 17.49 2.56 0.00 3.32
234 236 2.029964 GCTTCCGGACCGAACACA 59.970 61.111 17.49 0.00 0.00 3.72
235 237 1.375523 GCTTCCGGACCGAACACAT 60.376 57.895 17.49 0.00 0.00 3.21
236 238 1.635663 GCTTCCGGACCGAACACATG 61.636 60.000 17.49 0.00 0.00 3.21
237 239 0.037697 CTTCCGGACCGAACACATGA 60.038 55.000 17.49 0.00 0.00 3.07
238 240 0.393448 TTCCGGACCGAACACATGAA 59.607 50.000 17.49 5.38 0.00 2.57
239 241 0.320073 TCCGGACCGAACACATGAAC 60.320 55.000 17.49 0.00 0.00 3.18
240 242 1.623081 CCGGACCGAACACATGAACG 61.623 60.000 17.49 0.00 0.00 3.95
242 244 0.320073 GGACCGAACACATGAACGGA 60.320 55.000 22.48 0.00 46.94 4.69
243 245 1.504359 GACCGAACACATGAACGGAA 58.496 50.000 22.48 0.00 46.94 4.30
244 246 1.193874 GACCGAACACATGAACGGAAC 59.806 52.381 22.48 15.07 46.94 3.62
245 247 0.515564 CCGAACACATGAACGGAACC 59.484 55.000 15.12 0.00 46.94 3.62
246 248 1.222300 CGAACACATGAACGGAACCA 58.778 50.000 0.00 0.00 0.00 3.67
247 249 1.804151 CGAACACATGAACGGAACCAT 59.196 47.619 0.00 0.00 0.00 3.55
248 250 2.225491 CGAACACATGAACGGAACCATT 59.775 45.455 0.00 0.00 0.00 3.16
249 251 3.666902 CGAACACATGAACGGAACCATTC 60.667 47.826 0.00 0.00 0.00 2.67
250 252 2.159382 ACACATGAACGGAACCATTCC 58.841 47.619 0.00 0.00 46.62 3.01
264 266 6.951256 GAACCATTCCATTCTACTTTTTGC 57.049 37.500 0.00 0.00 0.00 3.68
265 267 6.670695 AACCATTCCATTCTACTTTTTGCT 57.329 33.333 0.00 0.00 0.00 3.91
266 268 6.272822 ACCATTCCATTCTACTTTTTGCTC 57.727 37.500 0.00 0.00 0.00 4.26
267 269 5.106157 ACCATTCCATTCTACTTTTTGCTCG 60.106 40.000 0.00 0.00 0.00 5.03
268 270 5.106157 CCATTCCATTCTACTTTTTGCTCGT 60.106 40.000 0.00 0.00 0.00 4.18
269 271 6.093495 CCATTCCATTCTACTTTTTGCTCGTA 59.907 38.462 0.00 0.00 0.00 3.43
270 272 6.476243 TTCCATTCTACTTTTTGCTCGTAC 57.524 37.500 0.00 0.00 0.00 3.67
271 273 4.933400 TCCATTCTACTTTTTGCTCGTACC 59.067 41.667 0.00 0.00 0.00 3.34
272 274 4.201685 CCATTCTACTTTTTGCTCGTACCG 60.202 45.833 0.00 0.00 0.00 4.02
273 275 3.921119 TCTACTTTTTGCTCGTACCGA 57.079 42.857 0.00 0.00 0.00 4.69
274 276 4.241590 TCTACTTTTTGCTCGTACCGAA 57.758 40.909 0.00 0.00 34.74 4.30
275 277 3.983344 TCTACTTTTTGCTCGTACCGAAC 59.017 43.478 0.00 0.00 34.74 3.95
276 278 2.553086 ACTTTTTGCTCGTACCGAACA 58.447 42.857 0.00 0.00 34.74 3.18
277 279 3.135994 ACTTTTTGCTCGTACCGAACAT 58.864 40.909 0.00 0.00 32.12 2.71
278 280 4.309099 ACTTTTTGCTCGTACCGAACATA 58.691 39.130 0.00 0.00 32.12 2.29
279 281 4.387862 ACTTTTTGCTCGTACCGAACATAG 59.612 41.667 0.00 0.00 32.12 2.23
280 282 2.572191 TTGCTCGTACCGAACATAGG 57.428 50.000 0.00 0.00 32.12 2.57
281 283 0.742505 TGCTCGTACCGAACATAGGG 59.257 55.000 0.00 0.00 34.74 3.53
282 284 0.596859 GCTCGTACCGAACATAGGGC 60.597 60.000 0.00 0.00 34.74 5.19
283 285 0.031721 CTCGTACCGAACATAGGGCC 59.968 60.000 0.00 0.00 34.74 5.80
284 286 1.299620 CGTACCGAACATAGGGCCG 60.300 63.158 0.00 0.00 0.00 6.13
285 287 1.068585 GTACCGAACATAGGGCCGG 59.931 63.158 0.00 0.00 46.65 6.13
286 288 1.076118 TACCGAACATAGGGCCGGA 60.076 57.895 5.05 0.00 44.29 5.14
287 289 0.687098 TACCGAACATAGGGCCGGAA 60.687 55.000 5.05 0.00 44.29 4.30
288 290 1.523032 CCGAACATAGGGCCGGAAC 60.523 63.158 5.05 0.00 44.29 3.62
289 291 1.523032 CGAACATAGGGCCGGAACC 60.523 63.158 5.05 6.57 0.00 3.62
290 292 1.605453 GAACATAGGGCCGGAACCA 59.395 57.895 5.05 0.00 0.00 3.67
291 293 0.034863 GAACATAGGGCCGGAACCAA 60.035 55.000 5.05 0.00 0.00 3.67
292 294 0.323087 AACATAGGGCCGGAACCAAC 60.323 55.000 5.05 0.00 0.00 3.77
293 295 1.453197 CATAGGGCCGGAACCAACC 60.453 63.158 5.05 0.00 0.00 3.77
294 296 2.686572 ATAGGGCCGGAACCAACCC 61.687 63.158 5.05 4.69 43.17 4.11
297 299 4.960866 GGCCGGAACCAACCCGTT 62.961 66.667 5.05 0.00 45.14 4.44
298 300 3.359523 GCCGGAACCAACCCGTTC 61.360 66.667 5.05 0.00 45.14 3.95
303 305 2.928416 GAACCAACCCGTTCCTCTG 58.072 57.895 0.00 0.00 36.87 3.35
304 306 0.605589 GAACCAACCCGTTCCTCTGG 60.606 60.000 0.00 0.00 36.87 3.86
305 307 1.057851 AACCAACCCGTTCCTCTGGA 61.058 55.000 0.00 0.00 0.00 3.86
306 308 1.057851 ACCAACCCGTTCCTCTGGAA 61.058 55.000 0.00 0.00 39.66 3.53
307 309 0.328258 CCAACCCGTTCCTCTGGAAT 59.672 55.000 2.17 0.00 44.04 3.01
308 310 1.453155 CAACCCGTTCCTCTGGAATG 58.547 55.000 10.66 10.66 44.04 2.67
329 331 2.432444 GAACCATTCCATTCCGTGACA 58.568 47.619 0.00 0.00 0.00 3.58
330 332 2.113860 ACCATTCCATTCCGTGACAG 57.886 50.000 0.00 0.00 0.00 3.51
331 333 1.351017 ACCATTCCATTCCGTGACAGT 59.649 47.619 0.00 0.00 0.00 3.55
332 334 2.224769 ACCATTCCATTCCGTGACAGTT 60.225 45.455 0.00 0.00 0.00 3.16
333 335 2.162208 CCATTCCATTCCGTGACAGTTG 59.838 50.000 0.00 0.00 0.00 3.16
334 336 1.890876 TTCCATTCCGTGACAGTTGG 58.109 50.000 0.00 0.00 0.00 3.77
335 337 0.762418 TCCATTCCGTGACAGTTGGT 59.238 50.000 0.00 0.00 0.00 3.67
336 338 1.142060 TCCATTCCGTGACAGTTGGTT 59.858 47.619 0.00 0.00 0.00 3.67
337 339 1.535462 CCATTCCGTGACAGTTGGTTC 59.465 52.381 0.00 0.00 0.00 3.62
338 340 1.535462 CATTCCGTGACAGTTGGTTCC 59.465 52.381 0.00 0.00 0.00 3.62
339 341 0.834612 TTCCGTGACAGTTGGTTCCT 59.165 50.000 0.00 0.00 0.00 3.36
340 342 0.105964 TCCGTGACAGTTGGTTCCTG 59.894 55.000 0.00 0.00 36.01 3.86
341 343 0.105964 CCGTGACAGTTGGTTCCTGA 59.894 55.000 0.00 0.00 34.04 3.86
342 344 1.474320 CCGTGACAGTTGGTTCCTGAA 60.474 52.381 0.00 0.00 34.04 3.02
343 345 1.597663 CGTGACAGTTGGTTCCTGAAC 59.402 52.381 1.33 1.33 40.45 3.18
353 355 2.863401 GTTCCTGAACCAAACACACC 57.137 50.000 0.00 0.00 35.36 4.16
354 356 1.407618 GTTCCTGAACCAAACACACCC 59.592 52.381 0.00 0.00 35.36 4.61
484 486 5.247337 TCTTCCCTTTTTCTTTGGTGTTGTT 59.753 36.000 0.00 0.00 0.00 2.83
485 487 5.491323 TCCCTTTTTCTTTGGTGTTGTTT 57.509 34.783 0.00 0.00 0.00 2.83
486 488 6.607004 TCCCTTTTTCTTTGGTGTTGTTTA 57.393 33.333 0.00 0.00 0.00 2.01
487 489 7.189079 TCCCTTTTTCTTTGGTGTTGTTTAT 57.811 32.000 0.00 0.00 0.00 1.40
488 490 7.625469 TCCCTTTTTCTTTGGTGTTGTTTATT 58.375 30.769 0.00 0.00 0.00 1.40
489 491 8.103935 TCCCTTTTTCTTTGGTGTTGTTTATTT 58.896 29.630 0.00 0.00 0.00 1.40
490 492 9.384764 CCCTTTTTCTTTGGTGTTGTTTATTTA 57.615 29.630 0.00 0.00 0.00 1.40
500 502 9.796120 TTGGTGTTGTTTATTTACTGAAAAGAG 57.204 29.630 0.00 0.00 0.00 2.85
501 503 8.962679 TGGTGTTGTTTATTTACTGAAAAGAGT 58.037 29.630 0.00 0.00 0.00 3.24
502 504 9.233232 GGTGTTGTTTATTTACTGAAAAGAGTG 57.767 33.333 0.00 0.00 0.00 3.51
503 505 9.783256 GTGTTGTTTATTTACTGAAAAGAGTGT 57.217 29.630 0.00 0.00 0.00 3.55
512 514 8.980143 TTTACTGAAAAGAGTGTTTTTCTTGG 57.020 30.769 11.20 5.76 43.89 3.61
513 515 6.590234 ACTGAAAAGAGTGTTTTTCTTGGT 57.410 33.333 11.20 6.21 43.89 3.67
514 516 6.993079 ACTGAAAAGAGTGTTTTTCTTGGTT 58.007 32.000 11.20 0.00 43.89 3.67
515 517 7.441836 ACTGAAAAGAGTGTTTTTCTTGGTTT 58.558 30.769 11.20 0.00 43.89 3.27
516 518 8.581578 ACTGAAAAGAGTGTTTTTCTTGGTTTA 58.418 29.630 11.20 0.00 43.89 2.01
517 519 8.980143 TGAAAAGAGTGTTTTTCTTGGTTTAG 57.020 30.769 11.20 0.00 43.89 1.85
518 520 8.581578 TGAAAAGAGTGTTTTTCTTGGTTTAGT 58.418 29.630 11.20 0.00 43.89 2.24
524 526 9.888878 GAGTGTTTTTCTTGGTTTAGTATTACC 57.111 33.333 0.00 0.00 34.93 2.85
525 527 9.636789 AGTGTTTTTCTTGGTTTAGTATTACCT 57.363 29.630 0.00 0.00 35.41 3.08
553 555 9.998106 ACATAGTCATGTAAAGTAAACTGAACT 57.002 29.630 0.00 0.00 43.74 3.01
555 557 9.998106 ATAGTCATGTAAAGTAAACTGAACTGT 57.002 29.630 0.00 0.00 0.00 3.55
556 558 8.732746 AGTCATGTAAAGTAAACTGAACTGTT 57.267 30.769 0.00 0.00 0.00 3.16
557 559 8.827677 AGTCATGTAAAGTAAACTGAACTGTTC 58.172 33.333 13.49 13.49 0.00 3.18
558 560 8.609176 GTCATGTAAAGTAAACTGAACTGTTCA 58.391 33.333 20.95 20.95 38.17 3.18
559 561 9.168451 TCATGTAAAGTAAACTGAACTGTTCAA 57.832 29.630 22.25 6.62 39.58 2.69
560 562 9.781834 CATGTAAAGTAAACTGAACTGTTCAAA 57.218 29.630 22.25 7.40 39.58 2.69
562 564 9.781834 TGTAAAGTAAACTGAACTGTTCAAATG 57.218 29.630 22.25 14.10 39.58 2.32
563 565 7.755582 AAAGTAAACTGAACTGTTCAAATGC 57.244 32.000 22.25 14.56 39.58 3.56
564 566 5.831997 AGTAAACTGAACTGTTCAAATGCC 58.168 37.500 22.25 11.47 39.58 4.40
565 567 3.733443 AACTGAACTGTTCAAATGCCC 57.267 42.857 22.25 0.00 39.58 5.36
566 568 2.949447 ACTGAACTGTTCAAATGCCCT 58.051 42.857 22.25 0.00 39.58 5.19
567 569 2.887152 ACTGAACTGTTCAAATGCCCTC 59.113 45.455 22.25 0.00 39.58 4.30
568 570 2.886523 CTGAACTGTTCAAATGCCCTCA 59.113 45.455 22.25 0.00 39.58 3.86
569 571 3.499338 TGAACTGTTCAAATGCCCTCAT 58.501 40.909 20.14 0.00 36.59 2.90
570 572 3.256383 TGAACTGTTCAAATGCCCTCATG 59.744 43.478 20.14 0.00 36.59 3.07
571 573 2.880443 ACTGTTCAAATGCCCTCATGT 58.120 42.857 0.00 0.00 32.23 3.21
572 574 3.233507 ACTGTTCAAATGCCCTCATGTT 58.766 40.909 0.00 0.00 32.23 2.71
573 575 4.406456 ACTGTTCAAATGCCCTCATGTTA 58.594 39.130 0.00 0.00 32.23 2.41
574 576 4.218417 ACTGTTCAAATGCCCTCATGTTAC 59.782 41.667 0.00 0.00 32.23 2.50
575 577 4.406456 TGTTCAAATGCCCTCATGTTACT 58.594 39.130 0.00 0.00 32.23 2.24
576 578 5.565509 TGTTCAAATGCCCTCATGTTACTA 58.434 37.500 0.00 0.00 32.23 1.82
577 579 6.007076 TGTTCAAATGCCCTCATGTTACTAA 58.993 36.000 0.00 0.00 32.23 2.24
578 580 6.491745 TGTTCAAATGCCCTCATGTTACTAAA 59.508 34.615 0.00 0.00 32.23 1.85
579 581 7.014711 TGTTCAAATGCCCTCATGTTACTAAAA 59.985 33.333 0.00 0.00 32.23 1.52
585 587 4.331968 CCCTCATGTTACTAAAAGGTGCA 58.668 43.478 0.00 0.00 0.00 4.57
650 652 6.146510 TGTTAAGTTAGGATGCTTACGTTGTG 59.853 38.462 0.00 0.00 0.00 3.33
651 653 3.596214 AGTTAGGATGCTTACGTTGTGG 58.404 45.455 0.00 0.00 0.00 4.17
675 677 4.623002 TCGTTGTGTATGTAAGCTGACAA 58.377 39.130 8.32 0.00 31.83 3.18
676 678 4.684242 TCGTTGTGTATGTAAGCTGACAAG 59.316 41.667 8.32 0.00 31.83 3.16
677 679 4.447724 CGTTGTGTATGTAAGCTGACAAGT 59.552 41.667 8.32 0.00 31.83 3.16
678 680 5.631929 CGTTGTGTATGTAAGCTGACAAGTA 59.368 40.000 8.32 0.00 31.83 2.24
679 681 6.399669 CGTTGTGTATGTAAGCTGACAAGTAC 60.400 42.308 8.32 7.96 31.83 2.73
680 682 6.340962 TGTGTATGTAAGCTGACAAGTACT 57.659 37.500 8.32 0.00 31.83 2.73
681 683 6.387465 TGTGTATGTAAGCTGACAAGTACTC 58.613 40.000 8.32 8.74 31.83 2.59
682 684 5.805994 GTGTATGTAAGCTGACAAGTACTCC 59.194 44.000 8.32 0.00 31.83 3.85
683 685 3.955650 TGTAAGCTGACAAGTACTCCC 57.044 47.619 0.00 0.00 0.00 4.30
684 686 3.507411 TGTAAGCTGACAAGTACTCCCT 58.493 45.455 0.00 0.00 0.00 4.20
685 687 3.510360 TGTAAGCTGACAAGTACTCCCTC 59.490 47.826 0.00 0.00 0.00 4.30
686 688 1.562783 AGCTGACAAGTACTCCCTCC 58.437 55.000 0.00 0.00 0.00 4.30
687 689 0.173708 GCTGACAAGTACTCCCTCCG 59.826 60.000 0.00 0.00 0.00 4.63
688 690 1.546961 CTGACAAGTACTCCCTCCGT 58.453 55.000 0.00 0.00 0.00 4.69
689 691 1.893801 CTGACAAGTACTCCCTCCGTT 59.106 52.381 0.00 0.00 0.00 4.44
690 692 1.891150 TGACAAGTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 0.00 3.95
691 693 1.204231 GACAAGTACTCCCTCCGTTCC 59.796 57.143 0.00 0.00 0.00 3.62
692 694 1.263356 CAAGTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
693 695 1.621814 CAAGTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
694 696 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
695 697 2.547990 AGTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
696 698 2.910977 AGTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
697 699 4.098894 AGTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
698 700 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
699 701 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
700 702 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
701 703 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
702 704 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
703 705 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
704 706 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
705 707 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
706 708 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
707 709 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
708 710 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
709 711 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
710 712 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
711 713 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
712 714 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
713 715 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
714 716 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
715 717 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
716 718 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
717 719 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
718 720 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
719 721 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
720 722 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
721 723 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
722 724 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
723 725 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
724 726 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
725 727 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
726 728 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
727 729 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
728 730 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
729 731 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
730 732 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
756 758 6.537453 ACATCTAGATACATCCATACCTGC 57.463 41.667 4.54 0.00 0.00 4.85
757 759 5.126222 ACATCTAGATACATCCATACCTGCG 59.874 44.000 4.54 0.00 0.00 5.18
758 760 4.918588 TCTAGATACATCCATACCTGCGA 58.081 43.478 0.00 0.00 0.00 5.10
759 761 3.944055 AGATACATCCATACCTGCGAC 57.056 47.619 0.00 0.00 0.00 5.19
760 762 3.230976 AGATACATCCATACCTGCGACA 58.769 45.455 0.00 0.00 0.00 4.35
761 763 3.641436 AGATACATCCATACCTGCGACAA 59.359 43.478 0.00 0.00 0.00 3.18
762 764 2.315925 ACATCCATACCTGCGACAAG 57.684 50.000 0.00 0.00 0.00 3.16
763 765 1.555075 ACATCCATACCTGCGACAAGT 59.445 47.619 0.00 0.00 0.00 3.16
764 766 2.764010 ACATCCATACCTGCGACAAGTA 59.236 45.455 0.00 0.00 0.00 2.24
765 767 3.196901 ACATCCATACCTGCGACAAGTAA 59.803 43.478 0.00 0.00 0.00 2.24
766 768 4.141711 ACATCCATACCTGCGACAAGTAAT 60.142 41.667 0.00 0.00 0.00 1.89
767 769 4.481368 TCCATACCTGCGACAAGTAATT 57.519 40.909 0.00 0.00 0.00 1.40
768 770 4.439057 TCCATACCTGCGACAAGTAATTC 58.561 43.478 0.00 0.00 0.00 2.17
769 771 3.245284 CCATACCTGCGACAAGTAATTCG 59.755 47.826 0.00 0.00 38.31 3.34
770 772 1.722011 ACCTGCGACAAGTAATTCGG 58.278 50.000 0.00 0.00 35.73 4.30
771 773 1.274167 ACCTGCGACAAGTAATTCGGA 59.726 47.619 0.00 0.00 35.73 4.55
772 774 2.289195 ACCTGCGACAAGTAATTCGGAA 60.289 45.455 0.00 0.00 35.02 4.30
773 775 2.093783 CCTGCGACAAGTAATTCGGAAC 59.906 50.000 0.00 0.00 35.02 3.62
793 795 1.967066 CGGAGGGAGTAATGCATCTCT 59.033 52.381 13.43 8.85 0.00 3.10
1117 2040 4.261801 GCAGTGACCTGTTTACCATACAT 58.738 43.478 0.00 0.00 41.02 2.29
1118 2041 4.094887 GCAGTGACCTGTTTACCATACATG 59.905 45.833 0.00 0.00 41.02 3.21
1185 2202 4.946478 AGTACAGCTCTTCAAGAACAGT 57.054 40.909 0.00 0.00 0.00 3.55
1337 2623 1.693606 CAGCCACCAAACTTTCCCAAT 59.306 47.619 0.00 0.00 0.00 3.16
1391 2677 4.876125 TCAAAGCCGCATTAAACAAATCA 58.124 34.783 0.00 0.00 0.00 2.57
1485 2771 8.898761 ACAATTTACTGAACTTGTGAATGTACA 58.101 29.630 0.00 0.00 31.00 2.90
1500 2795 7.170828 TGTGAATGTACACAGTATCACAAGAAC 59.829 37.037 19.40 2.81 44.29 3.01
1513 2808 0.238289 CAAGAACATTTGCGCCGAGT 59.762 50.000 4.18 0.00 0.00 4.18
1637 2932 1.678635 CTTTCCAGAATGCCCGCCA 60.679 57.895 0.00 0.00 31.97 5.69
1912 3927 3.214328 ACAAAACTTTGACGAGGCTCAT 58.786 40.909 15.95 0.00 40.55 2.90
2223 4243 5.008331 AGATATATGCATGTTCTGGCCTTG 58.992 41.667 10.16 0.00 0.00 3.61
2235 4255 0.174845 TGGCCTTGTATTCTCGTCCG 59.825 55.000 3.32 0.00 0.00 4.79
2258 4278 5.004440 CGTTTCATGTTCGAGATCAACGTAT 59.996 40.000 10.98 0.00 32.96 3.06
2301 4334 4.036262 TGTTGCATCGTTAAGCACTTTCTT 59.964 37.500 0.00 0.00 41.05 2.52
2357 4390 2.200373 ACGCTTTAGCTGGAAATGGT 57.800 45.000 0.00 0.00 39.32 3.55
2396 4429 6.810182 TCGATCAGTTGTAAGCTTACCTAAAC 59.190 38.462 29.15 25.07 32.72 2.01
2515 4551 4.568152 AACAAACTCAAGGCATGTACAC 57.432 40.909 0.00 0.00 0.00 2.90
2586 4744 6.210385 GGCATGGAGAAGATAGAGATTGTCTA 59.790 42.308 0.00 0.00 42.22 2.59
2746 4980 0.037326 GAGACTGTCGTTGATGCCCA 60.037 55.000 1.52 0.00 0.00 5.36
2796 5030 0.308376 GACGAGGAGTAGACGCCATC 59.692 60.000 5.20 0.00 38.37 3.51
2802 5036 0.739561 GAGTAGACGCCATCGGTTCT 59.260 55.000 0.00 0.00 40.69 3.01
2808 5042 0.953960 ACGCCATCGGTTCTTGAACC 60.954 55.000 19.50 19.50 40.69 3.62
2819 5054 1.898574 CTTGAACCGCCAAGCCACT 60.899 57.895 0.00 0.00 37.35 4.00
2845 5080 1.421382 CGTTTGGTAATGTCCGACGT 58.579 50.000 0.00 0.00 36.03 4.34
2851 5086 3.018856 TGGTAATGTCCGACGTATCAGT 58.981 45.455 0.00 0.00 0.00 3.41
3113 5369 3.153130 CACACCACACCCATGTTTCATA 58.847 45.455 0.00 0.00 36.72 2.15
3153 5409 0.756294 TTCAGCTTGTCTCGACCCAA 59.244 50.000 0.00 0.00 0.00 4.12
3206 5471 4.816385 TCTGCACTACAAAACTGAGAAAGG 59.184 41.667 0.00 0.00 0.00 3.11
3276 5541 8.477984 TTTCTAAAACATTTCCAGCAATATGC 57.522 30.769 0.00 0.00 45.46 3.14
3320 5585 5.921408 CCTTACGCTAGGATCATTTCTACAC 59.079 44.000 0.00 0.00 37.50 2.90
3371 5638 6.334202 CCTTACTAGAGACAGATGAACCAAC 58.666 44.000 0.00 0.00 0.00 3.77
3506 6607 3.147553 AGAGGAGCTTTTCAAGGAACC 57.852 47.619 0.00 0.00 0.00 3.62
3507 6608 2.713708 AGAGGAGCTTTTCAAGGAACCT 59.286 45.455 0.00 0.00 0.00 3.50
3537 6639 3.700350 CTCCCCTCCCCCTCCTGT 61.700 72.222 0.00 0.00 0.00 4.00
3606 6711 2.695597 CCTCCTGCTCTCCCTCCT 59.304 66.667 0.00 0.00 0.00 3.69
3614 6719 4.144727 TCTCCCTCCTCCCTCGCC 62.145 72.222 0.00 0.00 0.00 5.54
3680 6785 2.756283 CGGGGCCTTCTCGTCTCT 60.756 66.667 0.84 0.00 0.00 3.10
3696 6801 4.368808 CTGCGCGTGGGTGTTTCG 62.369 66.667 8.43 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.787085 ACTAGTTTGAACAGCATAGAACAC 57.213 37.500 0.00 0.00 0.00 3.32
1 2 6.872020 GGTACTAGTTTGAACAGCATAGAACA 59.128 38.462 0.00 0.00 0.00 3.18
2 3 6.872020 TGGTACTAGTTTGAACAGCATAGAAC 59.128 38.462 0.00 0.00 0.00 3.01
3 4 6.999950 TGGTACTAGTTTGAACAGCATAGAA 58.000 36.000 0.00 0.00 0.00 2.10
4 5 6.599356 TGGTACTAGTTTGAACAGCATAGA 57.401 37.500 0.00 0.00 0.00 1.98
5 6 9.197694 GATATGGTACTAGTTTGAACAGCATAG 57.802 37.037 14.77 0.75 0.00 2.23
6 7 8.148351 GGATATGGTACTAGTTTGAACAGCATA 58.852 37.037 12.81 12.81 0.00 3.14
7 8 6.992715 GGATATGGTACTAGTTTGAACAGCAT 59.007 38.462 0.00 5.85 0.00 3.79
8 9 6.156256 AGGATATGGTACTAGTTTGAACAGCA 59.844 38.462 0.00 0.00 0.00 4.41
9 10 6.583562 AGGATATGGTACTAGTTTGAACAGC 58.416 40.000 0.00 0.00 0.00 4.40
10 11 8.883731 CAAAGGATATGGTACTAGTTTGAACAG 58.116 37.037 0.00 0.00 0.00 3.16
11 12 7.335924 GCAAAGGATATGGTACTAGTTTGAACA 59.664 37.037 0.00 0.00 0.00 3.18
12 13 7.335924 TGCAAAGGATATGGTACTAGTTTGAAC 59.664 37.037 0.00 0.00 0.00 3.18
13 14 7.398829 TGCAAAGGATATGGTACTAGTTTGAA 58.601 34.615 0.00 0.00 0.00 2.69
14 15 6.953101 TGCAAAGGATATGGTACTAGTTTGA 58.047 36.000 0.00 0.00 0.00 2.69
15 16 7.624360 TTGCAAAGGATATGGTACTAGTTTG 57.376 36.000 0.00 0.00 0.00 2.93
16 17 7.865706 CTTGCAAAGGATATGGTACTAGTTT 57.134 36.000 0.00 0.00 41.27 2.66
45 46 9.216117 TGCCTATTTTACTTCAGAGAAACTAAC 57.784 33.333 0.00 0.00 0.00 2.34
46 47 9.216117 GTGCCTATTTTACTTCAGAGAAACTAA 57.784 33.333 0.00 0.00 0.00 2.24
83 85 6.892658 AGATGTAGGAGTAGCAGACAATAG 57.107 41.667 0.00 0.00 0.00 1.73
84 86 7.124298 ACAAAGATGTAGGAGTAGCAGACAATA 59.876 37.037 0.00 0.00 38.24 1.90
85 87 6.070538 ACAAAGATGTAGGAGTAGCAGACAAT 60.071 38.462 0.00 0.00 38.24 2.71
86 88 5.246203 ACAAAGATGTAGGAGTAGCAGACAA 59.754 40.000 0.00 0.00 38.24 3.18
87 89 4.772624 ACAAAGATGTAGGAGTAGCAGACA 59.227 41.667 0.00 0.00 38.24 3.41
88 90 5.331876 ACAAAGATGTAGGAGTAGCAGAC 57.668 43.478 0.00 0.00 38.24 3.51
89 91 7.661536 ATTACAAAGATGTAGGAGTAGCAGA 57.338 36.000 0.00 0.00 42.72 4.26
90 92 9.988815 ATTATTACAAAGATGTAGGAGTAGCAG 57.011 33.333 0.00 0.00 42.72 4.24
100 102 9.555727 GGCTCCACTAATTATTACAAAGATGTA 57.444 33.333 0.00 0.00 41.05 2.29
101 103 8.052748 TGGCTCCACTAATTATTACAAAGATGT 58.947 33.333 0.00 0.00 43.74 3.06
102 104 8.450578 TGGCTCCACTAATTATTACAAAGATG 57.549 34.615 0.00 0.00 0.00 2.90
103 105 9.646522 AATGGCTCCACTAATTATTACAAAGAT 57.353 29.630 0.00 0.00 0.00 2.40
104 106 8.902806 CAATGGCTCCACTAATTATTACAAAGA 58.097 33.333 0.00 0.00 0.00 2.52
105 107 8.686334 ACAATGGCTCCACTAATTATTACAAAG 58.314 33.333 0.00 0.00 0.00 2.77
106 108 8.588290 ACAATGGCTCCACTAATTATTACAAA 57.412 30.769 0.00 0.00 0.00 2.83
107 109 8.588290 AACAATGGCTCCACTAATTATTACAA 57.412 30.769 0.00 0.00 0.00 2.41
108 110 8.588290 AAACAATGGCTCCACTAATTATTACA 57.412 30.769 0.00 0.00 0.00 2.41
109 111 9.869757 AAAAACAATGGCTCCACTAATTATTAC 57.130 29.630 0.00 0.00 0.00 1.89
114 116 9.271828 CTTTTAAAAACAATGGCTCCACTAATT 57.728 29.630 1.66 0.00 0.00 1.40
115 117 7.877612 CCTTTTAAAAACAATGGCTCCACTAAT 59.122 33.333 1.66 0.00 0.00 1.73
116 118 7.070074 TCCTTTTAAAAACAATGGCTCCACTAA 59.930 33.333 1.66 0.00 0.00 2.24
117 119 6.551601 TCCTTTTAAAAACAATGGCTCCACTA 59.448 34.615 1.66 0.00 0.00 2.74
118 120 5.365314 TCCTTTTAAAAACAATGGCTCCACT 59.635 36.000 1.66 0.00 0.00 4.00
119 121 5.606505 TCCTTTTAAAAACAATGGCTCCAC 58.393 37.500 1.66 0.00 0.00 4.02
120 122 5.878406 TCCTTTTAAAAACAATGGCTCCA 57.122 34.783 1.66 0.00 0.00 3.86
121 123 6.230472 ACATCCTTTTAAAAACAATGGCTCC 58.770 36.000 15.63 0.00 0.00 4.70
122 124 7.226523 ACAACATCCTTTTAAAAACAATGGCTC 59.773 33.333 15.63 0.00 0.00 4.70
123 125 7.053498 ACAACATCCTTTTAAAAACAATGGCT 58.947 30.769 15.63 0.05 0.00 4.75
124 126 7.258022 ACAACATCCTTTTAAAAACAATGGC 57.742 32.000 15.63 0.00 0.00 4.40
128 130 9.508642 AGGAAAACAACATCCTTTTAAAAACAA 57.491 25.926 1.66 0.00 43.59 2.83
140 142 8.770438 TTATATTTGCAAGGAAAACAACATCC 57.230 30.769 0.00 0.00 35.88 3.51
142 144 9.553064 TGTTTATATTTGCAAGGAAAACAACAT 57.447 25.926 19.98 4.32 33.73 2.71
143 145 8.948631 TGTTTATATTTGCAAGGAAAACAACA 57.051 26.923 19.98 13.13 33.73 3.33
144 146 9.862585 CTTGTTTATATTTGCAAGGAAAACAAC 57.137 29.630 24.63 14.50 39.23 3.32
145 147 9.823647 TCTTGTTTATATTTGCAAGGAAAACAA 57.176 25.926 25.62 25.62 40.83 2.83
146 148 9.995003 ATCTTGTTTATATTTGCAAGGAAAACA 57.005 25.926 19.08 19.08 38.90 2.83
148 150 8.934825 GCATCTTGTTTATATTTGCAAGGAAAA 58.065 29.630 0.00 0.00 38.90 2.29
149 151 8.313292 AGCATCTTGTTTATATTTGCAAGGAAA 58.687 29.630 0.00 0.00 38.90 3.13
150 152 7.760794 CAGCATCTTGTTTATATTTGCAAGGAA 59.239 33.333 0.00 0.00 38.90 3.36
151 153 7.259882 CAGCATCTTGTTTATATTTGCAAGGA 58.740 34.615 0.00 0.00 38.90 3.36
152 154 6.019318 GCAGCATCTTGTTTATATTTGCAAGG 60.019 38.462 0.00 0.00 38.90 3.61
153 155 6.755141 AGCAGCATCTTGTTTATATTTGCAAG 59.245 34.615 0.00 0.00 39.52 4.01
154 156 6.532302 CAGCAGCATCTTGTTTATATTTGCAA 59.468 34.615 0.00 0.00 0.00 4.08
155 157 6.037726 CAGCAGCATCTTGTTTATATTTGCA 58.962 36.000 0.00 0.00 0.00 4.08
156 158 6.267817 TCAGCAGCATCTTGTTTATATTTGC 58.732 36.000 0.00 0.00 0.00 3.68
157 159 8.692110 TTTCAGCAGCATCTTGTTTATATTTG 57.308 30.769 0.00 0.00 0.00 2.32
158 160 9.880157 AATTTCAGCAGCATCTTGTTTATATTT 57.120 25.926 0.00 0.00 0.00 1.40
159 161 9.880157 AAATTTCAGCAGCATCTTGTTTATATT 57.120 25.926 0.00 0.00 0.00 1.28
160 162 9.880157 AAAATTTCAGCAGCATCTTGTTTATAT 57.120 25.926 0.00 0.00 0.00 0.86
161 163 9.142515 CAAAATTTCAGCAGCATCTTGTTTATA 57.857 29.630 0.00 0.00 0.00 0.98
162 164 7.658575 ACAAAATTTCAGCAGCATCTTGTTTAT 59.341 29.630 0.00 0.00 0.00 1.40
163 165 6.985645 ACAAAATTTCAGCAGCATCTTGTTTA 59.014 30.769 0.00 0.00 0.00 2.01
164 166 5.818857 ACAAAATTTCAGCAGCATCTTGTTT 59.181 32.000 0.00 0.00 0.00 2.83
165 167 5.362263 ACAAAATTTCAGCAGCATCTTGTT 58.638 33.333 0.00 0.00 0.00 2.83
166 168 4.952460 ACAAAATTTCAGCAGCATCTTGT 58.048 34.783 0.00 0.00 0.00 3.16
167 169 7.591006 AATACAAAATTTCAGCAGCATCTTG 57.409 32.000 0.00 0.00 0.00 3.02
168 170 8.611654 AAAATACAAAATTTCAGCAGCATCTT 57.388 26.923 0.00 0.00 0.00 2.40
169 171 8.500773 CAAAAATACAAAATTTCAGCAGCATCT 58.499 29.630 0.00 0.00 0.00 2.90
170 172 8.497554 TCAAAAATACAAAATTTCAGCAGCATC 58.502 29.630 0.00 0.00 0.00 3.91
171 173 8.380743 TCAAAAATACAAAATTTCAGCAGCAT 57.619 26.923 0.00 0.00 0.00 3.79
172 174 7.783090 TCAAAAATACAAAATTTCAGCAGCA 57.217 28.000 0.00 0.00 0.00 4.41
189 191 7.915397 CGGAATGAAGAACGGAATATCAAAAAT 59.085 33.333 0.00 0.00 0.00 1.82
190 192 7.094549 ACGGAATGAAGAACGGAATATCAAAAA 60.095 33.333 0.00 0.00 0.00 1.94
191 193 6.373216 ACGGAATGAAGAACGGAATATCAAAA 59.627 34.615 0.00 0.00 0.00 2.44
192 194 5.878116 ACGGAATGAAGAACGGAATATCAAA 59.122 36.000 0.00 0.00 0.00 2.69
193 195 5.293324 CACGGAATGAAGAACGGAATATCAA 59.707 40.000 0.00 0.00 0.00 2.57
194 196 4.808895 CACGGAATGAAGAACGGAATATCA 59.191 41.667 0.00 0.00 0.00 2.15
195 197 4.318831 GCACGGAATGAAGAACGGAATATC 60.319 45.833 0.00 0.00 0.00 1.63
196 198 3.560068 GCACGGAATGAAGAACGGAATAT 59.440 43.478 0.00 0.00 0.00 1.28
197 199 2.933906 GCACGGAATGAAGAACGGAATA 59.066 45.455 0.00 0.00 0.00 1.75
198 200 1.737793 GCACGGAATGAAGAACGGAAT 59.262 47.619 0.00 0.00 0.00 3.01
199 201 1.153353 GCACGGAATGAAGAACGGAA 58.847 50.000 0.00 0.00 0.00 4.30
200 202 0.320374 AGCACGGAATGAAGAACGGA 59.680 50.000 0.00 0.00 0.00 4.69
201 203 1.128692 GAAGCACGGAATGAAGAACGG 59.871 52.381 0.00 0.00 0.00 4.44
202 204 1.128692 GGAAGCACGGAATGAAGAACG 59.871 52.381 0.00 0.00 0.00 3.95
203 205 1.128692 CGGAAGCACGGAATGAAGAAC 59.871 52.381 0.00 0.00 0.00 3.01
204 206 1.438651 CGGAAGCACGGAATGAAGAA 58.561 50.000 0.00 0.00 0.00 2.52
205 207 3.137484 CGGAAGCACGGAATGAAGA 57.863 52.632 0.00 0.00 0.00 2.87
214 216 3.110178 GTTCGGTCCGGAAGCACG 61.110 66.667 5.23 9.37 0.00 5.34
215 217 2.029964 TGTTCGGTCCGGAAGCAC 59.970 61.111 5.23 4.72 0.00 4.40
216 218 2.029964 GTGTTCGGTCCGGAAGCA 59.970 61.111 5.23 0.00 0.00 3.91
217 219 1.375523 ATGTGTTCGGTCCGGAAGC 60.376 57.895 5.23 0.00 0.00 3.86
218 220 0.037697 TCATGTGTTCGGTCCGGAAG 60.038 55.000 5.23 3.23 0.00 3.46
219 221 0.393448 TTCATGTGTTCGGTCCGGAA 59.607 50.000 5.23 1.98 0.00 4.30
220 222 0.320073 GTTCATGTGTTCGGTCCGGA 60.320 55.000 12.29 0.00 0.00 5.14
221 223 1.623081 CGTTCATGTGTTCGGTCCGG 61.623 60.000 12.29 0.00 0.00 5.14
222 224 1.623081 CCGTTCATGTGTTCGGTCCG 61.623 60.000 4.39 4.39 38.45 4.79
223 225 0.320073 TCCGTTCATGTGTTCGGTCC 60.320 55.000 15.41 0.00 42.95 4.46
224 226 1.193874 GTTCCGTTCATGTGTTCGGTC 59.806 52.381 15.41 9.57 42.95 4.79
225 227 1.223187 GTTCCGTTCATGTGTTCGGT 58.777 50.000 15.41 0.00 42.95 4.69
226 228 0.515564 GGTTCCGTTCATGTGTTCGG 59.484 55.000 11.84 11.84 43.65 4.30
227 229 1.222300 TGGTTCCGTTCATGTGTTCG 58.778 50.000 0.00 0.00 0.00 3.95
228 230 3.365969 GGAATGGTTCCGTTCATGTGTTC 60.366 47.826 20.77 3.23 40.59 3.18
229 231 2.556622 GGAATGGTTCCGTTCATGTGTT 59.443 45.455 20.77 0.00 40.59 3.32
230 232 2.159382 GGAATGGTTCCGTTCATGTGT 58.841 47.619 20.77 0.00 40.59 3.72
231 233 2.919666 GGAATGGTTCCGTTCATGTG 57.080 50.000 20.77 0.00 40.59 3.21
241 243 6.691508 AGCAAAAAGTAGAATGGAATGGTTC 58.308 36.000 0.00 0.00 0.00 3.62
242 244 6.570378 CGAGCAAAAAGTAGAATGGAATGGTT 60.570 38.462 0.00 0.00 0.00 3.67
243 245 5.106157 CGAGCAAAAAGTAGAATGGAATGGT 60.106 40.000 0.00 0.00 0.00 3.55
244 246 5.106157 ACGAGCAAAAAGTAGAATGGAATGG 60.106 40.000 0.00 0.00 0.00 3.16
245 247 5.942872 ACGAGCAAAAAGTAGAATGGAATG 58.057 37.500 0.00 0.00 0.00 2.67
246 248 6.093633 GGTACGAGCAAAAAGTAGAATGGAAT 59.906 38.462 0.00 0.00 0.00 3.01
247 249 5.410439 GGTACGAGCAAAAAGTAGAATGGAA 59.590 40.000 0.00 0.00 0.00 3.53
248 250 4.933400 GGTACGAGCAAAAAGTAGAATGGA 59.067 41.667 0.00 0.00 0.00 3.41
249 251 5.217895 GGTACGAGCAAAAAGTAGAATGG 57.782 43.478 0.00 0.00 0.00 3.16
267 269 1.068585 CCGGCCCTATGTTCGGTAC 59.931 63.158 0.00 0.00 37.92 3.34
268 270 0.687098 TTCCGGCCCTATGTTCGGTA 60.687 55.000 0.00 0.00 42.71 4.02
269 271 1.991167 TTCCGGCCCTATGTTCGGT 60.991 57.895 0.00 0.00 42.71 4.69
270 272 1.523032 GTTCCGGCCCTATGTTCGG 60.523 63.158 0.00 0.00 43.42 4.30
271 273 1.523032 GGTTCCGGCCCTATGTTCG 60.523 63.158 0.00 0.00 0.00 3.95
272 274 0.034863 TTGGTTCCGGCCCTATGTTC 60.035 55.000 10.83 0.00 0.00 3.18
273 275 0.323087 GTTGGTTCCGGCCCTATGTT 60.323 55.000 10.83 0.00 0.00 2.71
274 276 1.301954 GTTGGTTCCGGCCCTATGT 59.698 57.895 10.83 0.00 0.00 2.29
275 277 1.453197 GGTTGGTTCCGGCCCTATG 60.453 63.158 10.83 0.00 0.00 2.23
276 278 2.686572 GGGTTGGTTCCGGCCCTAT 61.687 63.158 10.83 0.00 38.12 2.57
277 279 3.332385 GGGTTGGTTCCGGCCCTA 61.332 66.667 10.83 1.29 38.12 3.53
285 287 0.605589 CCAGAGGAACGGGTTGGTTC 60.606 60.000 0.00 0.00 44.34 3.62
286 288 1.057851 TCCAGAGGAACGGGTTGGTT 61.058 55.000 0.00 0.00 35.40 3.67
287 289 1.057851 TTCCAGAGGAACGGGTTGGT 61.058 55.000 0.00 0.00 36.71 3.67
288 290 0.328258 ATTCCAGAGGAACGGGTTGG 59.672 55.000 0.00 0.00 45.07 3.77
289 291 1.453155 CATTCCAGAGGAACGGGTTG 58.547 55.000 0.00 0.00 45.07 3.77
290 292 0.328258 CCATTCCAGAGGAACGGGTT 59.672 55.000 3.04 0.00 45.07 4.11
291 293 0.546747 TCCATTCCAGAGGAACGGGT 60.547 55.000 10.63 0.00 44.25 5.28
292 294 0.618458 TTCCATTCCAGAGGAACGGG 59.382 55.000 10.63 10.57 44.25 5.28
296 298 3.968265 GAATGGTTCCATTCCAGAGGAA 58.032 45.455 25.54 0.30 46.39 3.36
297 299 3.652057 GAATGGTTCCATTCCAGAGGA 57.348 47.619 25.54 0.00 43.68 3.71
309 311 2.420022 CTGTCACGGAATGGAATGGTTC 59.580 50.000 0.00 0.00 0.00 3.62
310 312 2.224769 ACTGTCACGGAATGGAATGGTT 60.225 45.455 0.00 0.00 0.00 3.67
311 313 1.351017 ACTGTCACGGAATGGAATGGT 59.649 47.619 0.00 0.00 0.00 3.55
312 314 2.113860 ACTGTCACGGAATGGAATGG 57.886 50.000 0.00 0.00 0.00 3.16
313 315 2.162208 CCAACTGTCACGGAATGGAATG 59.838 50.000 7.26 0.00 0.00 2.67
314 316 2.224769 ACCAACTGTCACGGAATGGAAT 60.225 45.455 16.94 0.00 0.00 3.01
315 317 1.142060 ACCAACTGTCACGGAATGGAA 59.858 47.619 16.94 0.00 0.00 3.53
316 318 0.762418 ACCAACTGTCACGGAATGGA 59.238 50.000 16.94 0.00 0.00 3.41
317 319 1.535462 GAACCAACTGTCACGGAATGG 59.465 52.381 10.55 10.55 0.00 3.16
318 320 1.535462 GGAACCAACTGTCACGGAATG 59.465 52.381 0.00 0.00 0.00 2.67
319 321 1.420138 AGGAACCAACTGTCACGGAAT 59.580 47.619 0.00 0.00 0.00 3.01
320 322 0.834612 AGGAACCAACTGTCACGGAA 59.165 50.000 0.00 0.00 0.00 4.30
321 323 0.105964 CAGGAACCAACTGTCACGGA 59.894 55.000 0.00 0.00 0.00 4.69
322 324 0.105964 TCAGGAACCAACTGTCACGG 59.894 55.000 0.00 0.00 37.25 4.94
323 325 1.597663 GTTCAGGAACCAACTGTCACG 59.402 52.381 0.64 0.00 37.25 4.35
334 336 1.407618 GGGTGTGTTTGGTTCAGGAAC 59.592 52.381 3.58 3.58 40.45 3.62
335 337 1.770294 GGGTGTGTTTGGTTCAGGAA 58.230 50.000 0.00 0.00 0.00 3.36
336 338 0.464735 CGGGTGTGTTTGGTTCAGGA 60.465 55.000 0.00 0.00 0.00 3.86
337 339 0.750182 ACGGGTGTGTTTGGTTCAGG 60.750 55.000 0.00 0.00 0.00 3.86
338 340 1.956297 TACGGGTGTGTTTGGTTCAG 58.044 50.000 0.00 0.00 0.00 3.02
339 341 2.414994 TTACGGGTGTGTTTGGTTCA 57.585 45.000 0.00 0.00 0.00 3.18
340 342 2.619646 ACATTACGGGTGTGTTTGGTTC 59.380 45.455 0.00 0.00 0.00 3.62
341 343 2.359531 CACATTACGGGTGTGTTTGGTT 59.640 45.455 8.40 0.00 41.48 3.67
342 344 1.950909 CACATTACGGGTGTGTTTGGT 59.049 47.619 8.40 0.00 41.48 3.67
343 345 2.697431 CACATTACGGGTGTGTTTGG 57.303 50.000 8.40 0.00 41.48 3.28
486 488 9.586435 CCAAGAAAAACACTCTTTTCAGTAAAT 57.414 29.630 10.48 0.00 44.36 1.40
487 489 8.581578 ACCAAGAAAAACACTCTTTTCAGTAAA 58.418 29.630 10.48 0.00 44.36 2.01
488 490 8.117813 ACCAAGAAAAACACTCTTTTCAGTAA 57.882 30.769 10.48 0.00 44.36 2.24
489 491 7.696992 ACCAAGAAAAACACTCTTTTCAGTA 57.303 32.000 10.48 0.00 44.36 2.74
490 492 6.590234 ACCAAGAAAAACACTCTTTTCAGT 57.410 33.333 10.48 3.58 44.36 3.41
491 493 7.889589 AAACCAAGAAAAACACTCTTTTCAG 57.110 32.000 10.48 3.93 44.36 3.02
492 494 8.581578 ACTAAACCAAGAAAAACACTCTTTTCA 58.418 29.630 10.48 0.00 44.36 2.69
493 495 8.981724 ACTAAACCAAGAAAAACACTCTTTTC 57.018 30.769 1.45 1.45 42.94 2.29
498 500 9.888878 GGTAATACTAAACCAAGAAAAACACTC 57.111 33.333 0.00 0.00 35.73 3.51
499 501 9.636789 AGGTAATACTAAACCAAGAAAAACACT 57.363 29.630 0.00 0.00 38.30 3.55
529 531 9.998106 ACAGTTCAGTTTACTTTACATGACTAT 57.002 29.630 0.00 0.00 0.00 2.12
530 532 9.826574 AACAGTTCAGTTTACTTTACATGACTA 57.173 29.630 0.00 0.00 0.00 2.59
531 533 8.732746 AACAGTTCAGTTTACTTTACATGACT 57.267 30.769 0.00 0.00 0.00 3.41
532 534 8.609176 TGAACAGTTCAGTTTACTTTACATGAC 58.391 33.333 12.24 0.00 34.08 3.06
533 535 8.725405 TGAACAGTTCAGTTTACTTTACATGA 57.275 30.769 12.24 0.00 34.08 3.07
534 536 9.781834 TTTGAACAGTTCAGTTTACTTTACATG 57.218 29.630 15.61 0.00 41.38 3.21
536 538 9.781834 CATTTGAACAGTTCAGTTTACTTTACA 57.218 29.630 15.61 0.00 41.38 2.41
537 539 8.743099 GCATTTGAACAGTTCAGTTTACTTTAC 58.257 33.333 15.61 0.00 41.38 2.01
538 540 7.918562 GGCATTTGAACAGTTCAGTTTACTTTA 59.081 33.333 15.61 0.00 41.38 1.85
539 541 6.756542 GGCATTTGAACAGTTCAGTTTACTTT 59.243 34.615 15.61 0.00 41.38 2.66
540 542 6.273071 GGCATTTGAACAGTTCAGTTTACTT 58.727 36.000 15.61 0.00 41.38 2.24
541 543 5.221244 GGGCATTTGAACAGTTCAGTTTACT 60.221 40.000 15.61 0.00 41.38 2.24
542 544 4.982295 GGGCATTTGAACAGTTCAGTTTAC 59.018 41.667 15.61 8.11 41.38 2.01
543 545 4.892934 AGGGCATTTGAACAGTTCAGTTTA 59.107 37.500 15.61 0.00 41.38 2.01
544 546 3.706086 AGGGCATTTGAACAGTTCAGTTT 59.294 39.130 15.61 2.93 41.38 2.66
545 547 3.299503 AGGGCATTTGAACAGTTCAGTT 58.700 40.909 15.61 5.31 41.38 3.16
546 548 2.887152 GAGGGCATTTGAACAGTTCAGT 59.113 45.455 15.61 6.75 41.38 3.41
547 549 2.886523 TGAGGGCATTTGAACAGTTCAG 59.113 45.455 15.61 6.39 41.38 3.02
548 550 2.942804 TGAGGGCATTTGAACAGTTCA 58.057 42.857 12.24 12.24 38.04 3.18
549 551 3.256631 ACATGAGGGCATTTGAACAGTTC 59.743 43.478 6.32 6.32 30.68 3.01
550 552 3.233507 ACATGAGGGCATTTGAACAGTT 58.766 40.909 0.00 0.00 30.68 3.16
551 553 2.880443 ACATGAGGGCATTTGAACAGT 58.120 42.857 0.00 0.00 30.68 3.55
552 554 3.947910 AACATGAGGGCATTTGAACAG 57.052 42.857 0.00 0.00 30.68 3.16
553 555 4.406456 AGTAACATGAGGGCATTTGAACA 58.594 39.130 0.00 0.00 30.68 3.18
554 556 6.509418 TTAGTAACATGAGGGCATTTGAAC 57.491 37.500 0.00 0.00 30.68 3.18
555 557 7.309744 CCTTTTAGTAACATGAGGGCATTTGAA 60.310 37.037 0.00 0.00 30.68 2.69
556 558 6.152661 CCTTTTAGTAACATGAGGGCATTTGA 59.847 38.462 0.00 0.00 30.68 2.69
557 559 6.071391 ACCTTTTAGTAACATGAGGGCATTTG 60.071 38.462 0.00 0.00 30.68 2.32
558 560 6.016555 ACCTTTTAGTAACATGAGGGCATTT 58.983 36.000 0.00 0.00 30.68 2.32
559 561 5.418840 CACCTTTTAGTAACATGAGGGCATT 59.581 40.000 0.00 0.00 30.68 3.56
560 562 4.949856 CACCTTTTAGTAACATGAGGGCAT 59.050 41.667 0.00 0.00 34.29 4.40
561 563 4.331968 CACCTTTTAGTAACATGAGGGCA 58.668 43.478 0.00 0.00 0.00 5.36
562 564 3.128764 GCACCTTTTAGTAACATGAGGGC 59.871 47.826 0.00 0.00 0.00 5.19
563 565 4.331968 TGCACCTTTTAGTAACATGAGGG 58.668 43.478 0.00 0.00 0.00 4.30
564 566 5.957842 TTGCACCTTTTAGTAACATGAGG 57.042 39.130 0.00 0.00 0.00 3.86
565 567 8.730680 ACTATTTGCACCTTTTAGTAACATGAG 58.269 33.333 0.00 0.00 0.00 2.90
566 568 8.630054 ACTATTTGCACCTTTTAGTAACATGA 57.370 30.769 0.00 0.00 0.00 3.07
569 571 8.508875 GCTAACTATTTGCACCTTTTAGTAACA 58.491 33.333 0.00 0.00 0.00 2.41
570 572 8.508875 TGCTAACTATTTGCACCTTTTAGTAAC 58.491 33.333 0.00 0.00 0.00 2.50
571 573 8.624367 TGCTAACTATTTGCACCTTTTAGTAA 57.376 30.769 0.00 0.00 0.00 2.24
572 574 8.801882 ATGCTAACTATTTGCACCTTTTAGTA 57.198 30.769 0.00 0.00 39.63 1.82
573 575 7.703058 ATGCTAACTATTTGCACCTTTTAGT 57.297 32.000 0.00 0.00 39.63 2.24
574 576 7.857885 GCTATGCTAACTATTTGCACCTTTTAG 59.142 37.037 0.00 0.53 39.63 1.85
575 577 7.556275 AGCTATGCTAACTATTTGCACCTTTTA 59.444 33.333 0.00 0.00 36.99 1.52
576 578 6.378280 AGCTATGCTAACTATTTGCACCTTTT 59.622 34.615 0.00 0.00 36.99 2.27
577 579 5.888161 AGCTATGCTAACTATTTGCACCTTT 59.112 36.000 0.00 0.00 36.99 3.11
578 580 5.297776 CAGCTATGCTAACTATTTGCACCTT 59.702 40.000 0.00 0.00 36.40 3.50
579 581 4.818546 CAGCTATGCTAACTATTTGCACCT 59.181 41.667 0.00 0.00 36.40 4.00
585 587 6.040616 ACCGACTACAGCTATGCTAACTATTT 59.959 38.462 0.00 0.00 36.40 1.40
650 652 3.991773 TCAGCTTACATACACAACGAACC 59.008 43.478 0.00 0.00 0.00 3.62
651 653 4.446385 TGTCAGCTTACATACACAACGAAC 59.554 41.667 0.00 0.00 0.00 3.95
675 677 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
676 678 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
677 679 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
678 680 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
679 681 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
680 682 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
681 683 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
682 684 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
683 685 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
684 686 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
685 687 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
686 688 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
687 689 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
688 690 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
689 691 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
690 692 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
691 693 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
692 694 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
693 695 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
694 696 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
695 697 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
696 698 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
697 699 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
698 700 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
699 701 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
700 702 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
701 703 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
702 704 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
703 705 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
704 706 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
730 732 8.700051 GCAGGTATGGATGTATCTAGATGTATT 58.300 37.037 15.79 0.00 0.00 1.89
731 733 7.013750 CGCAGGTATGGATGTATCTAGATGTAT 59.986 40.741 15.79 9.11 0.00 2.29
732 734 6.318900 CGCAGGTATGGATGTATCTAGATGTA 59.681 42.308 15.79 4.44 0.00 2.29
733 735 5.126222 CGCAGGTATGGATGTATCTAGATGT 59.874 44.000 15.79 1.25 0.00 3.06
734 736 5.358160 TCGCAGGTATGGATGTATCTAGATG 59.642 44.000 15.79 0.00 0.00 2.90
735 737 5.358442 GTCGCAGGTATGGATGTATCTAGAT 59.642 44.000 10.73 10.73 0.00 1.98
736 738 4.700692 GTCGCAGGTATGGATGTATCTAGA 59.299 45.833 0.00 0.00 0.00 2.43
737 739 4.459337 TGTCGCAGGTATGGATGTATCTAG 59.541 45.833 0.00 0.00 0.00 2.43
738 740 4.403734 TGTCGCAGGTATGGATGTATCTA 58.596 43.478 0.00 0.00 0.00 1.98
739 741 3.230976 TGTCGCAGGTATGGATGTATCT 58.769 45.455 0.00 0.00 0.00 1.98
740 742 3.660501 TGTCGCAGGTATGGATGTATC 57.339 47.619 0.00 0.00 0.00 2.24
741 743 3.388024 ACTTGTCGCAGGTATGGATGTAT 59.612 43.478 0.00 0.00 0.00 2.29
742 744 2.764010 ACTTGTCGCAGGTATGGATGTA 59.236 45.455 0.00 0.00 0.00 2.29
743 745 1.555075 ACTTGTCGCAGGTATGGATGT 59.445 47.619 0.00 0.00 0.00 3.06
744 746 2.315925 ACTTGTCGCAGGTATGGATG 57.684 50.000 0.00 0.00 0.00 3.51
745 747 4.689612 ATTACTTGTCGCAGGTATGGAT 57.310 40.909 3.46 0.00 0.00 3.41
746 748 4.439057 GAATTACTTGTCGCAGGTATGGA 58.561 43.478 3.46 0.00 0.00 3.41
747 749 3.245284 CGAATTACTTGTCGCAGGTATGG 59.755 47.826 3.46 0.00 0.00 2.74
748 750 3.245284 CCGAATTACTTGTCGCAGGTATG 59.755 47.826 3.46 0.00 35.93 2.39
749 751 3.131577 TCCGAATTACTTGTCGCAGGTAT 59.868 43.478 3.46 0.00 35.93 2.73
750 752 2.492881 TCCGAATTACTTGTCGCAGGTA 59.507 45.455 0.00 0.00 35.93 3.08
751 753 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00
752 754 2.004583 TCCGAATTACTTGTCGCAGG 57.995 50.000 0.00 0.00 35.93 4.85
753 755 2.222508 CGTTCCGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 35.93 5.18
754 756 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
755 757 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
756 758 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
757 759 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
758 760 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
759 761 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
760 762 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
761 763 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
762 764 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
763 765 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
764 766 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
765 767 1.856629 TTACTCCCTCCGTTCCGAAT 58.143 50.000 0.00 0.00 0.00 3.34
766 768 1.479323 CATTACTCCCTCCGTTCCGAA 59.521 52.381 0.00 0.00 0.00 4.30
767 769 1.108776 CATTACTCCCTCCGTTCCGA 58.891 55.000 0.00 0.00 0.00 4.55
768 770 0.529992 GCATTACTCCCTCCGTTCCG 60.530 60.000 0.00 0.00 0.00 4.30
769 771 0.539986 TGCATTACTCCCTCCGTTCC 59.460 55.000 0.00 0.00 0.00 3.62
770 772 2.103263 AGATGCATTACTCCCTCCGTTC 59.897 50.000 0.00 0.00 0.00 3.95
771 773 2.103263 GAGATGCATTACTCCCTCCGTT 59.897 50.000 0.00 0.00 0.00 4.44
772 774 1.689273 GAGATGCATTACTCCCTCCGT 59.311 52.381 0.00 0.00 0.00 4.69
773 775 1.967066 AGAGATGCATTACTCCCTCCG 59.033 52.381 10.88 0.00 34.13 4.63
774 776 5.753721 AATAGAGATGCATTACTCCCTCC 57.246 43.478 10.88 0.00 34.13 4.30
775 777 7.174080 GGAAAAATAGAGATGCATTACTCCCTC 59.826 40.741 10.88 7.15 34.13 4.30
776 778 7.001073 GGAAAAATAGAGATGCATTACTCCCT 58.999 38.462 10.88 0.00 34.13 4.20
777 779 6.772716 TGGAAAAATAGAGATGCATTACTCCC 59.227 38.462 10.88 5.20 34.13 4.30
778 780 7.500559 ACTGGAAAAATAGAGATGCATTACTCC 59.499 37.037 10.88 6.39 34.13 3.85
779 781 8.443953 ACTGGAAAAATAGAGATGCATTACTC 57.556 34.615 0.00 3.73 0.00 2.59
786 788 7.383102 TCTGAAACTGGAAAAATAGAGATGC 57.617 36.000 0.00 0.00 0.00 3.91
1185 2202 7.873719 TGTAAATTGTTGTTCCTTCAGAGAA 57.126 32.000 0.00 0.00 0.00 2.87
1391 2677 3.701040 AGTTGCTGACCTGACAACAAAAT 59.299 39.130 7.73 0.00 44.77 1.82
1483 2769 5.560760 CGCAAATGTTCTTGTGATACTGTGT 60.561 40.000 0.00 0.00 38.78 3.72
1484 2770 4.847757 CGCAAATGTTCTTGTGATACTGTG 59.152 41.667 0.00 0.00 38.78 3.66
1485 2771 4.613622 GCGCAAATGTTCTTGTGATACTGT 60.614 41.667 0.30 0.00 38.78 3.55
1489 2784 2.159585 CGGCGCAAATGTTCTTGTGATA 60.160 45.455 10.83 0.00 38.78 2.15
1513 2808 1.143838 CTGGTCAATCGATCCGCCA 59.856 57.895 0.00 6.50 0.00 5.69
1637 2932 4.681074 ATTTTCCCCAAAACGTCACAAT 57.319 36.364 0.00 0.00 34.24 2.71
1912 3927 7.725251 ACCTTATTGTGAAATTTTGAAGCAGA 58.275 30.769 0.00 0.00 0.00 4.26
2223 4243 4.259292 CGAACATGAAACGGACGAGAATAC 60.259 45.833 0.00 0.00 0.00 1.89
2235 4255 4.647291 ACGTTGATCTCGAACATGAAAC 57.353 40.909 15.29 0.00 0.00 2.78
2279 4303 4.147219 AGAAAGTGCTTAACGATGCAAC 57.853 40.909 0.00 0.00 41.10 4.17
2301 4334 8.518430 AACATACACCTATTGCATGTTATTCA 57.482 30.769 1.76 0.00 46.34 2.57
2357 4390 6.929049 ACAACTGATCGAGTTCAATCAAGTTA 59.071 34.615 7.35 0.00 43.52 2.24
2396 4429 5.117440 TGCAGTTTGTTTATGTACGTACGAG 59.883 40.000 24.41 0.00 0.00 4.18
2660 4893 6.258230 TGCAAATTGTCTTGATTGGACTAG 57.742 37.500 0.00 0.00 35.04 2.57
2746 4980 1.086696 CTTCGTCGGCATCATTGGTT 58.913 50.000 0.00 0.00 0.00 3.67
2750 4984 1.369625 GTTCCTTCGTCGGCATCATT 58.630 50.000 0.00 0.00 0.00 2.57
2802 5036 2.192861 CAGTGGCTTGGCGGTTCAA 61.193 57.895 0.00 0.00 0.00 2.69
2808 5042 2.639286 GACAACAGTGGCTTGGCG 59.361 61.111 0.00 0.00 0.00 5.69
2819 5054 2.879646 GGACATTACCAAACGGACAACA 59.120 45.455 0.00 0.00 0.00 3.33
2845 5080 5.511373 GGCAAGTCATACTATGCCACTGATA 60.511 44.000 19.42 0.00 44.41 2.15
2851 5086 1.142870 GGGGCAAGTCATACTATGCCA 59.857 52.381 22.78 0.00 45.57 4.92
3113 5369 5.047164 TGAAACATGGCTTAAAGCACATCAT 60.047 36.000 0.00 0.00 44.75 2.45
3182 5438 5.471456 CCTTTCTCAGTTTTGTAGTGCAGAT 59.529 40.000 0.00 0.00 0.00 2.90
3206 5471 4.380550 GCTGACCTGTAAAAAGTTATGGGC 60.381 45.833 0.00 0.00 0.00 5.36
3276 5541 2.111756 GTTGAGCAAGCAAACAACTCG 58.888 47.619 16.27 0.00 39.28 4.18
3320 5585 5.104259 AGCCAACTTCCCTCTATTTAGTG 57.896 43.478 0.00 0.00 0.00 2.74
3371 5638 5.640783 GGAAAGAGCCTTTCCAATCATTTTG 59.359 40.000 28.01 0.00 45.50 2.44
3498 6599 3.072211 GTTCCGGTTCTTAGGTTCCTTG 58.928 50.000 0.00 0.00 0.00 3.61
3506 6607 0.540454 GGGGAGGTTCCGGTTCTTAG 59.460 60.000 0.00 0.00 37.43 2.18
3507 6608 0.117742 AGGGGAGGTTCCGGTTCTTA 59.882 55.000 0.00 0.00 37.43 2.10
3595 6700 2.520741 CGAGGGAGGAGGGAGAGC 60.521 72.222 0.00 0.00 0.00 4.09
3596 6701 2.520741 GCGAGGGAGGAGGGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
3597 6702 4.144727 GGCGAGGGAGGAGGGAGA 62.145 72.222 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.