Multiple sequence alignment - TraesCS6A01G180900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G180900 chr6A 100.000 4682 0 0 886 5567 205109310 205104629 0.000000e+00 8647.0
1 TraesCS6A01G180900 chr6A 100.000 469 0 0 1 469 205110195 205109727 0.000000e+00 867.0
2 TraesCS6A01G180900 chr6A 97.388 268 5 1 2334 2601 551349022 551349287 6.570000e-124 455.0
3 TraesCS6A01G180900 chr6D 93.304 1792 85 22 3190 4961 143398822 143400598 0.000000e+00 2612.0
4 TraesCS6A01G180900 chr6D 93.526 1174 44 10 1178 2339 143397290 143398443 0.000000e+00 1718.0
5 TraesCS6A01G180900 chr6D 96.883 385 12 0 2596 2980 143398439 143398823 0.000000e+00 645.0
6 TraesCS6A01G180900 chr6D 92.708 384 24 4 89 469 143396350 143396732 8.150000e-153 551.0
7 TraesCS6A01G180900 chr6D 86.758 219 20 5 905 1122 143397004 143397214 9.320000e-58 235.0
8 TraesCS6A01G180900 chr6D 82.011 189 11 9 5386 5557 143400919 143401101 7.520000e-29 139.0
9 TraesCS6A01G180900 chr6D 88.235 68 7 1 3124 3191 422327477 422327411 4.620000e-11 80.5
10 TraesCS6A01G180900 chr6B 95.258 1645 49 10 3369 5002 255266612 255268238 0.000000e+00 2579.0
11 TraesCS6A01G180900 chr6B 94.166 1217 54 9 1135 2339 255264680 255265891 0.000000e+00 1838.0
12 TraesCS6A01G180900 chr6B 97.662 385 9 0 2596 2980 255265887 255266271 0.000000e+00 662.0
13 TraesCS6A01G180900 chr6B 91.702 470 29 7 1 466 255263690 255264153 1.310000e-180 643.0
14 TraesCS6A01G180900 chr6B 93.143 350 18 5 4999 5342 255268274 255268623 4.980000e-140 508.0
15 TraesCS6A01G180900 chr6B 95.135 185 5 2 3190 3371 255266270 255266453 7.060000e-74 289.0
16 TraesCS6A01G180900 chr6B 86.555 238 11 10 904 1139 255264424 255264642 5.570000e-60 243.0
17 TraesCS6A01G180900 chr6B 94.828 116 4 2 5452 5565 255268638 255268753 4.430000e-41 180.0
18 TraesCS6A01G180900 chr6B 94.444 108 6 0 3016 3123 469780416 469780523 3.450000e-37 167.0
19 TraesCS6A01G180900 chr6B 90.000 70 3 2 3124 3193 123378629 123378564 2.760000e-13 87.9
20 TraesCS6A01G180900 chr3A 97.761 268 4 1 2334 2601 58275076 58274811 1.410000e-125 460.0
21 TraesCS6A01G180900 chr1A 97.761 268 4 1 2334 2601 434540585 434540320 1.410000e-125 460.0
22 TraesCS6A01G180900 chr1A 97.388 268 5 1 2334 2601 358543555 358543290 6.570000e-124 455.0
23 TraesCS6A01G180900 chr1A 93.600 125 5 3 3011 3133 19894977 19894854 3.430000e-42 183.0
24 TraesCS6A01G180900 chrUn 97.388 268 5 1 2334 2601 1525693 1525428 6.570000e-124 455.0
25 TraesCS6A01G180900 chrUn 89.844 128 12 1 2996 3123 74611585 74611459 4.460000e-36 163.0
26 TraesCS6A01G180900 chrUn 97.727 44 1 0 2975 3018 108661286 108661243 5.980000e-10 76.8
27 TraesCS6A01G180900 chr7A 96.727 275 6 2 2327 2600 9210720 9210448 6.570000e-124 455.0
28 TraesCS6A01G180900 chr7A 97.388 268 5 1 2334 2601 139052206 139051941 6.570000e-124 455.0
29 TraesCS6A01G180900 chr7A 97.388 268 5 1 2334 2601 404836666 404836931 6.570000e-124 455.0
30 TraesCS6A01G180900 chr7A 97.388 268 5 1 2334 2601 463707605 463707870 6.570000e-124 455.0
31 TraesCS6A01G180900 chr7A 76.522 230 34 10 2967 3191 729073376 729073162 2.120000e-19 108.0
32 TraesCS6A01G180900 chr2D 95.413 109 5 0 3015 3123 194731109 194731001 2.060000e-39 174.0
33 TraesCS6A01G180900 chr2D 93.694 111 7 0 3013 3123 617338700 617338810 3.450000e-37 167.0
34 TraesCS6A01G180900 chr2D 98.113 53 1 0 3145 3197 260370041 260369989 5.940000e-15 93.5
35 TraesCS6A01G180900 chr2D 91.379 58 4 1 2975 3031 12369817 12369874 1.660000e-10 78.7
36 TraesCS6A01G180900 chr2D 84.810 79 9 3 3124 3200 640363460 640363383 5.980000e-10 76.8
37 TraesCS6A01G180900 chr1D 94.595 111 6 0 3013 3123 475815101 475814991 7.410000e-39 172.0
38 TraesCS6A01G180900 chr1D 97.872 47 0 1 2971 3017 437988496 437988451 4.620000e-11 80.5
39 TraesCS6A01G180900 chr7D 94.545 110 6 0 3014 3123 83802022 83801913 2.670000e-38 171.0
40 TraesCS6A01G180900 chr7D 100.000 31 0 0 3100 3130 35050718 35050748 2.170000e-04 58.4
41 TraesCS6A01G180900 chr4D 90.984 122 10 1 3003 3124 83277641 83277521 4.460000e-36 163.0
42 TraesCS6A01G180900 chr4D 88.571 70 6 2 3124 3192 112074018 112074086 3.570000e-12 84.2
43 TraesCS6A01G180900 chr4D 97.727 44 1 0 2975 3018 12354694 12354737 5.980000e-10 76.8
44 TraesCS6A01G180900 chr3D 92.241 116 8 1 3009 3124 76937285 76937399 4.460000e-36 163.0
45 TraesCS6A01G180900 chr3D 87.500 120 12 3 3015 3132 55744975 55745093 9.730000e-28 135.0
46 TraesCS6A01G180900 chr2B 89.091 110 12 0 3015 3124 756289762 756289871 2.700000e-28 137.0
47 TraesCS6A01G180900 chr2B 87.097 62 4 3 2958 3019 733151197 733151140 3.600000e-07 67.6
48 TraesCS6A01G180900 chr2A 90.278 72 4 3 3120 3191 564265057 564264989 2.140000e-14 91.6
49 TraesCS6A01G180900 chr2A 92.157 51 4 0 2967 3017 705235351 705235301 7.740000e-09 73.1
50 TraesCS6A01G180900 chr5D 94.828 58 2 1 3145 3202 222510212 222510156 7.680000e-14 89.8
51 TraesCS6A01G180900 chr5D 93.220 59 4 0 3145 3203 346885132 346885190 2.760000e-13 87.9
52 TraesCS6A01G180900 chr5D 85.714 77 8 3 3124 3198 228447030 228446955 1.660000e-10 78.7
53 TraesCS6A01G180900 chr5A 86.747 83 8 3 3124 3204 524052553 524052472 7.680000e-14 89.8
54 TraesCS6A01G180900 chr5A 96.078 51 2 0 2979 3029 578052347 578052397 3.570000e-12 84.2
55 TraesCS6A01G180900 chr4A 88.889 72 5 1 3120 3191 521842130 521842062 9.940000e-13 86.1
56 TraesCS6A01G180900 chr5B 89.062 64 5 2 2978 3040 129330060 129329998 1.660000e-10 78.7
57 TraesCS6A01G180900 chr7B 84.615 78 9 3 3124 3199 579489285 579489209 2.150000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G180900 chr6A 205104629 205110195 5566 True 4757.000000 8647 100.000000 1 5567 2 chr6A.!!$R1 5566
1 TraesCS6A01G180900 chr6D 143396350 143401101 4751 False 983.333333 2612 90.865000 89 5557 6 chr6D.!!$F1 5468
2 TraesCS6A01G180900 chr6B 255263690 255268753 5063 False 867.750000 2579 93.556125 1 5565 8 chr6B.!!$F2 5564


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
308 311 0.321919 CAACAGCAAGCCAGCTAGGA 60.322 55.0 6.40 0.0 44.54 2.94 F
1062 1071 0.182775 CAACGGGGGCCTTTATAGCT 59.817 55.0 0.84 0.0 0.00 3.32 F
2351 2683 0.115745 TTGTACTCCCTCCGGTCCTT 59.884 55.0 0.00 0.0 0.00 3.36 F
2352 2684 0.115745 TGTACTCCCTCCGGTCCTTT 59.884 55.0 0.00 0.0 0.00 3.11 F
3522 4018 0.033894 TTTAATTCCTCCCCACCCGC 60.034 55.0 0.00 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1623 1685 0.108585 TCGCCAACTGAAGCTCCTTT 59.891 50.0 0.00 0.0 0.00 3.11 R
2359 2691 0.527113 CGGCAAATCCAATGTGCAGA 59.473 50.0 4.59 0.0 40.12 4.26 R
3176 3508 0.033306 ACTTCTACTCCCTCCGTCCC 60.033 60.0 0.00 0.0 0.00 4.46 R
4188 4690 0.247736 ACTCGGTGATGGTGAGCTTC 59.752 55.0 0.00 0.0 32.98 3.86 R
4649 5156 0.404426 GGTGAAGGGCCCAAGTAACT 59.596 55.0 27.56 0.0 0.00 2.24 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.637273 GCACTTGGACGGGGGAGT 61.637 66.667 0.00 0.00 0.00 3.85
23 24 1.988406 ACTTGGACGGGGGAGTAGC 60.988 63.158 0.00 0.00 0.00 3.58
29 30 1.697982 GGACGGGGGAGTAGCATAAAT 59.302 52.381 0.00 0.00 0.00 1.40
36 37 4.520492 GGGGGAGTAGCATAAATGAACATG 59.480 45.833 0.00 0.00 0.00 3.21
98 99 6.541278 CACTGATTTCTCTGAGCCAATGAATA 59.459 38.462 0.00 0.00 0.00 1.75
243 246 6.206634 CCCCATTATTTTCGCTTATCTTAGCA 59.793 38.462 0.00 0.00 41.28 3.49
250 253 6.554334 TTTCGCTTATCTTAGCAAAGTGTT 57.446 33.333 0.00 0.00 41.28 3.32
251 254 6.554334 TTCGCTTATCTTAGCAAAGTGTTT 57.446 33.333 0.00 0.00 41.28 2.83
308 311 0.321919 CAACAGCAAGCCAGCTAGGA 60.322 55.000 6.40 0.00 44.54 2.94
312 315 2.674220 GCAAGCCAGCTAGGACCCT 61.674 63.158 6.40 0.00 41.22 4.34
313 316 1.524482 CAAGCCAGCTAGGACCCTC 59.476 63.158 6.40 0.00 41.22 4.30
314 317 1.081092 AAGCCAGCTAGGACCCTCA 59.919 57.895 6.40 0.00 41.22 3.86
320 324 1.133199 CAGCTAGGACCCTCATCTCCT 60.133 57.143 0.00 0.00 40.26 3.69
347 351 6.739900 AAACAAAAGCAAAAACAAAAACCG 57.260 29.167 0.00 0.00 0.00 4.44
958 965 2.703798 CGGGCTGGTGCTGATTTGG 61.704 63.158 0.00 0.00 39.59 3.28
960 967 1.304381 GGCTGGTGCTGATTTGGGA 60.304 57.895 0.00 0.00 39.59 4.37
1059 1068 4.991024 GCAACGGGGGCCTTTATA 57.009 55.556 0.84 0.00 0.00 0.98
1060 1069 2.715536 GCAACGGGGGCCTTTATAG 58.284 57.895 0.84 0.00 0.00 1.31
1061 1070 1.452953 GCAACGGGGGCCTTTATAGC 61.453 60.000 0.84 0.00 0.00 2.97
1062 1071 0.182775 CAACGGGGGCCTTTATAGCT 59.817 55.000 0.84 0.00 0.00 3.32
1063 1072 0.924090 AACGGGGGCCTTTATAGCTT 59.076 50.000 0.84 0.00 0.00 3.74
1064 1073 1.810455 ACGGGGGCCTTTATAGCTTA 58.190 50.000 0.84 0.00 0.00 3.09
1065 1074 1.419012 ACGGGGGCCTTTATAGCTTAC 59.581 52.381 0.84 0.00 0.00 2.34
1071 1080 5.545335 GGGGGCCTTTATAGCTTACTAAGTA 59.455 44.000 0.84 0.00 30.45 2.24
1097 1106 2.358267 TGTAATTTCCGTGCCGTTTTGT 59.642 40.909 0.00 0.00 0.00 2.83
1103 1112 1.657181 CGTGCCGTTTTGTGGAAGC 60.657 57.895 0.00 0.00 0.00 3.86
1147 1197 0.817654 GTGGGGGTTTTATCTGCTGC 59.182 55.000 0.00 0.00 0.00 5.25
1461 1513 4.828939 TGCTGTGAAGGAAATTGTTCAGAT 59.171 37.500 0.00 0.00 33.37 2.90
1464 1516 6.703165 GCTGTGAAGGAAATTGTTCAGATTTT 59.297 34.615 0.00 0.00 33.37 1.82
1465 1517 7.306983 GCTGTGAAGGAAATTGTTCAGATTTTG 60.307 37.037 0.00 0.00 33.37 2.44
1466 1518 7.555087 TGTGAAGGAAATTGTTCAGATTTTGT 58.445 30.769 0.00 0.00 33.37 2.83
1467 1519 8.690884 TGTGAAGGAAATTGTTCAGATTTTGTA 58.309 29.630 0.00 0.00 33.37 2.41
1517 1569 1.109609 GCGGCCTTACCTAGTGTACT 58.890 55.000 0.00 0.00 35.61 2.73
1539 1591 5.698545 ACTCAACAAGTACTTGAATCTGCTC 59.301 40.000 36.14 0.00 42.93 4.26
1542 1594 5.931441 ACAAGTACTTGAATCTGCTCAAC 57.069 39.130 36.14 0.00 42.93 3.18
1623 1685 1.482182 ACATGGCGCATCTTCTCACTA 59.518 47.619 10.83 0.00 0.00 2.74
1689 1751 0.768622 TTGGTGAAGGTGGATTCGGT 59.231 50.000 0.00 0.00 31.52 4.69
1927 1992 8.459635 GTTTCACCTCCTAATTTATTTCTGGTC 58.540 37.037 0.00 0.00 0.00 4.02
1990 2055 4.446371 AGCCCGTGAATATTCTTTGAGAG 58.554 43.478 16.24 1.10 0.00 3.20
1997 2062 7.412346 CCGTGAATATTCTTTGAGAGTGAACAG 60.412 40.741 16.24 0.08 0.00 3.16
2064 2129 2.638480 TCTGGTCTGGTGGAAAACTG 57.362 50.000 0.00 0.00 0.00 3.16
2082 2147 2.564947 ACTGACTTTCTCTCGCCTTCAT 59.435 45.455 0.00 0.00 0.00 2.57
2106 2171 9.831737 CATCTATTGGTTTACTTTTCAAGTCAG 57.168 33.333 0.00 0.00 41.77 3.51
2267 2338 3.446442 AGAAAGCATATATGGCCTGGG 57.554 47.619 14.51 0.00 0.00 4.45
2338 2670 5.984695 TGTTCTGAGTATCTGCTTGTACT 57.015 39.130 0.00 0.00 34.92 2.73
2339 2671 5.955488 TGTTCTGAGTATCTGCTTGTACTC 58.045 41.667 12.85 12.85 44.42 2.59
2340 2672 5.105716 TGTTCTGAGTATCTGCTTGTACTCC 60.106 44.000 15.46 5.76 43.84 3.85
2341 2673 3.954904 TCTGAGTATCTGCTTGTACTCCC 59.045 47.826 15.46 0.43 43.84 4.30
2342 2674 3.957497 CTGAGTATCTGCTTGTACTCCCT 59.043 47.826 15.46 0.00 43.84 4.20
2343 2675 3.954904 TGAGTATCTGCTTGTACTCCCTC 59.045 47.826 15.46 0.00 43.84 4.30
2344 2676 3.301274 AGTATCTGCTTGTACTCCCTCC 58.699 50.000 0.00 0.00 0.00 4.30
2345 2677 1.115467 ATCTGCTTGTACTCCCTCCG 58.885 55.000 0.00 0.00 0.00 4.63
2346 2678 0.970937 TCTGCTTGTACTCCCTCCGG 60.971 60.000 0.00 0.00 0.00 5.14
2347 2679 1.229082 TGCTTGTACTCCCTCCGGT 60.229 57.895 0.00 0.00 0.00 5.28
2348 2680 1.255667 TGCTTGTACTCCCTCCGGTC 61.256 60.000 0.00 0.00 0.00 4.79
2349 2681 1.957765 GCTTGTACTCCCTCCGGTCC 61.958 65.000 0.00 0.00 0.00 4.46
2350 2682 0.324460 CTTGTACTCCCTCCGGTCCT 60.324 60.000 0.00 0.00 0.00 3.85
2351 2683 0.115745 TTGTACTCCCTCCGGTCCTT 59.884 55.000 0.00 0.00 0.00 3.36
2352 2684 0.115745 TGTACTCCCTCCGGTCCTTT 59.884 55.000 0.00 0.00 0.00 3.11
2353 2685 1.273759 GTACTCCCTCCGGTCCTTTT 58.726 55.000 0.00 0.00 0.00 2.27
2354 2686 1.627329 GTACTCCCTCCGGTCCTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
2355 2687 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
2356 2688 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
2357 2689 1.626825 CTCCCTCCGGTCCTTTTTACA 59.373 52.381 0.00 0.00 0.00 2.41
2358 2690 1.348696 TCCCTCCGGTCCTTTTTACAC 59.651 52.381 0.00 0.00 0.00 2.90
2359 2691 1.350019 CCCTCCGGTCCTTTTTACACT 59.650 52.381 0.00 0.00 0.00 3.55
2360 2692 2.614734 CCCTCCGGTCCTTTTTACACTC 60.615 54.545 0.00 0.00 0.00 3.51
2361 2693 2.302157 CCTCCGGTCCTTTTTACACTCT 59.698 50.000 0.00 0.00 0.00 3.24
2362 2694 3.326747 CTCCGGTCCTTTTTACACTCTG 58.673 50.000 0.00 0.00 0.00 3.35
2363 2695 1.804748 CCGGTCCTTTTTACACTCTGC 59.195 52.381 0.00 0.00 0.00 4.26
2364 2696 2.489971 CGGTCCTTTTTACACTCTGCA 58.510 47.619 0.00 0.00 0.00 4.41
2365 2697 2.223377 CGGTCCTTTTTACACTCTGCAC 59.777 50.000 0.00 0.00 0.00 4.57
2366 2698 3.211045 GGTCCTTTTTACACTCTGCACA 58.789 45.455 0.00 0.00 0.00 4.57
2367 2699 3.821033 GGTCCTTTTTACACTCTGCACAT 59.179 43.478 0.00 0.00 0.00 3.21
2368 2700 4.278419 GGTCCTTTTTACACTCTGCACATT 59.722 41.667 0.00 0.00 0.00 2.71
2369 2701 5.215160 GTCCTTTTTACACTCTGCACATTG 58.785 41.667 0.00 0.00 0.00 2.82
2370 2702 4.278170 TCCTTTTTACACTCTGCACATTGG 59.722 41.667 0.00 0.00 0.00 3.16
2371 2703 4.278170 CCTTTTTACACTCTGCACATTGGA 59.722 41.667 0.00 0.00 0.00 3.53
2372 2704 5.047802 CCTTTTTACACTCTGCACATTGGAT 60.048 40.000 0.00 0.00 0.00 3.41
2373 2705 6.403866 TTTTTACACTCTGCACATTGGATT 57.596 33.333 0.00 0.00 0.00 3.01
2374 2706 6.403866 TTTTACACTCTGCACATTGGATTT 57.596 33.333 0.00 0.00 0.00 2.17
2375 2707 3.928727 ACACTCTGCACATTGGATTTG 57.071 42.857 0.00 0.00 0.00 2.32
2376 2708 2.029649 ACACTCTGCACATTGGATTTGC 60.030 45.455 0.00 0.00 36.76 3.68
2377 2709 1.547372 ACTCTGCACATTGGATTTGCC 59.453 47.619 0.00 0.00 35.26 4.52
2378 2710 0.527113 TCTGCACATTGGATTTGCCG 59.473 50.000 0.00 0.00 40.66 5.69
2379 2711 0.527113 CTGCACATTGGATTTGCCGA 59.473 50.000 0.00 0.00 40.66 5.54
2380 2712 0.964700 TGCACATTGGATTTGCCGAA 59.035 45.000 0.00 0.00 40.66 4.30
2381 2713 1.342496 TGCACATTGGATTTGCCGAAA 59.658 42.857 0.00 0.00 40.66 3.46
2382 2714 1.994779 GCACATTGGATTTGCCGAAAG 59.005 47.619 0.00 0.00 40.66 2.62
2383 2715 2.610232 GCACATTGGATTTGCCGAAAGT 60.610 45.455 0.00 0.00 40.66 2.66
2384 2716 3.244976 CACATTGGATTTGCCGAAAGTC 58.755 45.455 0.00 0.00 40.66 3.01
2385 2717 2.890311 ACATTGGATTTGCCGAAAGTCA 59.110 40.909 0.00 0.00 40.66 3.41
2386 2718 3.320541 ACATTGGATTTGCCGAAAGTCAA 59.679 39.130 0.00 0.00 40.66 3.18
2387 2719 4.202202 ACATTGGATTTGCCGAAAGTCAAA 60.202 37.500 0.00 0.00 40.66 2.69
2388 2720 3.363341 TGGATTTGCCGAAAGTCAAAC 57.637 42.857 0.00 0.00 40.66 2.93
2389 2721 2.955660 TGGATTTGCCGAAAGTCAAACT 59.044 40.909 0.00 0.00 40.66 2.66
2390 2722 3.383185 TGGATTTGCCGAAAGTCAAACTT 59.617 39.130 0.00 0.00 38.90 2.66
2391 2723 4.142049 TGGATTTGCCGAAAGTCAAACTTT 60.142 37.500 4.82 4.82 41.99 2.66
2392 2724 6.190408 TGGATTTGCCGAAAGTCAAACTTTG 61.190 40.000 9.65 0.00 42.50 2.77
2549 2881 5.972107 CTTGGTCAAAGTTGGATGAGATT 57.028 39.130 0.00 0.00 0.00 2.40
2550 2882 5.706916 CTTGGTCAAAGTTGGATGAGATTG 58.293 41.667 0.00 0.00 0.00 2.67
2551 2883 4.984295 TGGTCAAAGTTGGATGAGATTGA 58.016 39.130 0.00 0.00 0.00 2.57
2552 2884 4.761739 TGGTCAAAGTTGGATGAGATTGAC 59.238 41.667 7.68 7.68 43.51 3.18
2553 2885 5.006386 GGTCAAAGTTGGATGAGATTGACT 58.994 41.667 13.97 0.00 43.66 3.41
2554 2886 5.474876 GGTCAAAGTTGGATGAGATTGACTT 59.525 40.000 13.97 0.00 43.66 3.01
2555 2887 6.348868 GGTCAAAGTTGGATGAGATTGACTTC 60.349 42.308 13.97 0.00 43.66 3.01
2556 2888 5.409520 TCAAAGTTGGATGAGATTGACTTCG 59.590 40.000 0.00 0.00 0.00 3.79
2557 2889 3.866651 AGTTGGATGAGATTGACTTCGG 58.133 45.455 0.00 0.00 0.00 4.30
2558 2890 3.515502 AGTTGGATGAGATTGACTTCGGA 59.484 43.478 0.00 0.00 0.00 4.55
2559 2891 4.163078 AGTTGGATGAGATTGACTTCGGAT 59.837 41.667 0.00 0.00 0.00 4.18
2560 2892 5.363868 AGTTGGATGAGATTGACTTCGGATA 59.636 40.000 0.00 0.00 0.00 2.59
2561 2893 5.869649 TGGATGAGATTGACTTCGGATAA 57.130 39.130 0.00 0.00 0.00 1.75
2562 2894 6.233905 TGGATGAGATTGACTTCGGATAAA 57.766 37.500 0.00 0.00 0.00 1.40
2563 2895 6.049149 TGGATGAGATTGACTTCGGATAAAC 58.951 40.000 0.00 0.00 0.00 2.01
2564 2896 5.467063 GGATGAGATTGACTTCGGATAAACC 59.533 44.000 0.00 0.00 0.00 3.27
2565 2897 5.677319 TGAGATTGACTTCGGATAAACCT 57.323 39.130 0.00 0.00 36.31 3.50
2566 2898 6.785337 TGAGATTGACTTCGGATAAACCTA 57.215 37.500 0.00 0.00 36.31 3.08
2567 2899 7.177832 TGAGATTGACTTCGGATAAACCTAA 57.822 36.000 0.00 0.00 36.31 2.69
2568 2900 7.792032 TGAGATTGACTTCGGATAAACCTAAT 58.208 34.615 0.00 0.00 36.31 1.73
2569 2901 8.920174 TGAGATTGACTTCGGATAAACCTAATA 58.080 33.333 0.00 0.00 36.31 0.98
2570 2902 9.930693 GAGATTGACTTCGGATAAACCTAATAT 57.069 33.333 0.00 0.00 36.31 1.28
2571 2903 9.712305 AGATTGACTTCGGATAAACCTAATATG 57.288 33.333 0.00 0.00 36.31 1.78
2572 2904 7.724305 TTGACTTCGGATAAACCTAATATGC 57.276 36.000 0.00 0.00 36.31 3.14
2573 2905 6.822442 TGACTTCGGATAAACCTAATATGCA 58.178 36.000 0.00 0.00 36.31 3.96
2574 2906 6.929049 TGACTTCGGATAAACCTAATATGCAG 59.071 38.462 0.00 0.00 36.31 4.41
2575 2907 7.062749 ACTTCGGATAAACCTAATATGCAGA 57.937 36.000 0.00 0.00 36.31 4.26
2576 2908 7.155328 ACTTCGGATAAACCTAATATGCAGAG 58.845 38.462 0.00 0.00 36.31 3.35
2577 2909 6.665992 TCGGATAAACCTAATATGCAGAGT 57.334 37.500 0.00 0.00 36.31 3.24
2578 2910 7.770366 TCGGATAAACCTAATATGCAGAGTA 57.230 36.000 0.00 0.00 36.31 2.59
2579 2911 8.185506 TCGGATAAACCTAATATGCAGAGTAA 57.814 34.615 0.00 0.00 36.31 2.24
2580 2912 8.644216 TCGGATAAACCTAATATGCAGAGTAAA 58.356 33.333 0.00 0.00 36.31 2.01
2581 2913 9.268268 CGGATAAACCTAATATGCAGAGTAAAA 57.732 33.333 0.00 0.00 36.31 1.52
2586 2918 8.507524 AACCTAATATGCAGAGTAAAAAGGAC 57.492 34.615 2.56 0.00 0.00 3.85
2587 2919 7.862675 ACCTAATATGCAGAGTAAAAAGGACT 58.137 34.615 2.56 0.00 0.00 3.85
2588 2920 7.770897 ACCTAATATGCAGAGTAAAAAGGACTG 59.229 37.037 2.56 0.00 0.00 3.51
2589 2921 7.227512 CCTAATATGCAGAGTAAAAAGGACTGG 59.772 40.741 0.00 0.00 0.00 4.00
2590 2922 4.640771 ATGCAGAGTAAAAAGGACTGGA 57.359 40.909 0.00 0.00 33.99 3.86
2591 2923 4.008074 TGCAGAGTAAAAAGGACTGGAG 57.992 45.455 0.00 0.00 0.00 3.86
2592 2924 3.244561 TGCAGAGTAAAAAGGACTGGAGG 60.245 47.826 0.00 0.00 0.00 4.30
2593 2925 3.870299 GCAGAGTAAAAAGGACTGGAGGG 60.870 52.174 0.00 0.00 0.00 4.30
2594 2926 3.583086 CAGAGTAAAAAGGACTGGAGGGA 59.417 47.826 0.00 0.00 0.00 4.20
2595 2927 3.841255 AGAGTAAAAAGGACTGGAGGGAG 59.159 47.826 0.00 0.00 0.00 4.30
2596 2928 3.583526 GAGTAAAAAGGACTGGAGGGAGT 59.416 47.826 0.00 0.00 0.00 3.85
2597 2929 4.759953 AGTAAAAAGGACTGGAGGGAGTA 58.240 43.478 0.00 0.00 0.00 2.59
2598 2930 4.531339 AGTAAAAAGGACTGGAGGGAGTAC 59.469 45.833 0.00 0.00 0.00 2.73
2932 3264 5.914898 ACTTGGTAGCTTGTGTTTTTCTT 57.085 34.783 0.00 0.00 0.00 2.52
2959 3291 8.454859 AATCCTATGAGCATATTAAAGGGAGA 57.545 34.615 0.00 0.00 0.00 3.71
2976 3308 7.510675 AAGGGAGATGAAACAGAATACCTAA 57.489 36.000 0.00 0.00 0.00 2.69
2978 3310 8.107196 AGGGAGATGAAACAGAATACCTAAAT 57.893 34.615 0.00 0.00 0.00 1.40
2979 3311 9.225682 AGGGAGATGAAACAGAATACCTAAATA 57.774 33.333 0.00 0.00 0.00 1.40
2980 3312 9.274206 GGGAGATGAAACAGAATACCTAAATAC 57.726 37.037 0.00 0.00 0.00 1.89
2984 3316 9.274206 GATGAAACAGAATACCTAAATACTCCC 57.726 37.037 0.00 0.00 0.00 4.30
2985 3317 8.388656 TGAAACAGAATACCTAAATACTCCCT 57.611 34.615 0.00 0.00 0.00 4.20
2986 3318 8.832735 TGAAACAGAATACCTAAATACTCCCTT 58.167 33.333 0.00 0.00 0.00 3.95
2987 3319 9.327628 GAAACAGAATACCTAAATACTCCCTTC 57.672 37.037 0.00 0.00 0.00 3.46
2988 3320 7.052142 ACAGAATACCTAAATACTCCCTTCG 57.948 40.000 0.00 0.00 0.00 3.79
2989 3321 6.610425 ACAGAATACCTAAATACTCCCTTCGT 59.390 38.462 0.00 0.00 0.00 3.85
2990 3322 7.146648 CAGAATACCTAAATACTCCCTTCGTC 58.853 42.308 0.00 0.00 0.00 4.20
2991 3323 6.267242 AGAATACCTAAATACTCCCTTCGTCC 59.733 42.308 0.00 0.00 0.00 4.79
2992 3324 3.036819 ACCTAAATACTCCCTTCGTCCC 58.963 50.000 0.00 0.00 0.00 4.46
2993 3325 3.036091 CCTAAATACTCCCTTCGTCCCA 58.964 50.000 0.00 0.00 0.00 4.37
2994 3326 3.453353 CCTAAATACTCCCTTCGTCCCAA 59.547 47.826 0.00 0.00 0.00 4.12
2995 3327 4.080751 CCTAAATACTCCCTTCGTCCCAAA 60.081 45.833 0.00 0.00 0.00 3.28
2996 3328 4.376225 AAATACTCCCTTCGTCCCAAAA 57.624 40.909 0.00 0.00 0.00 2.44
2997 3329 4.586306 AATACTCCCTTCGTCCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
2998 3330 5.703730 AATACTCCCTTCGTCCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
2999 3331 5.703730 ATACTCCCTTCGTCCCAAAATAA 57.296 39.130 0.00 0.00 0.00 1.40
3000 3332 3.951663 ACTCCCTTCGTCCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
3001 3333 3.329814 ACTCCCTTCGTCCCAAAATAAGT 59.670 43.478 0.00 0.00 0.00 2.24
3002 3334 3.681593 TCCCTTCGTCCCAAAATAAGTG 58.318 45.455 0.00 0.00 0.00 3.16
3003 3335 3.073356 TCCCTTCGTCCCAAAATAAGTGT 59.927 43.478 0.00 0.00 0.00 3.55
3004 3336 3.439129 CCCTTCGTCCCAAAATAAGTGTC 59.561 47.826 0.00 0.00 0.00 3.67
3005 3337 4.324267 CCTTCGTCCCAAAATAAGTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
3006 3338 4.392138 CCTTCGTCCCAAAATAAGTGTCTC 59.608 45.833 0.00 0.00 0.00 3.36
3007 3339 4.610605 TCGTCCCAAAATAAGTGTCTCA 57.389 40.909 0.00 0.00 0.00 3.27
3008 3340 4.963373 TCGTCCCAAAATAAGTGTCTCAA 58.037 39.130 0.00 0.00 0.00 3.02
3009 3341 4.753107 TCGTCCCAAAATAAGTGTCTCAAC 59.247 41.667 0.00 0.00 0.00 3.18
3010 3342 4.083484 CGTCCCAAAATAAGTGTCTCAACC 60.083 45.833 0.00 0.00 0.00 3.77
3011 3343 5.070685 GTCCCAAAATAAGTGTCTCAACCT 58.929 41.667 0.00 0.00 0.00 3.50
3012 3344 5.535030 GTCCCAAAATAAGTGTCTCAACCTT 59.465 40.000 0.00 0.00 0.00 3.50
3013 3345 6.713450 GTCCCAAAATAAGTGTCTCAACCTTA 59.287 38.462 0.00 0.00 0.00 2.69
3014 3346 6.940298 TCCCAAAATAAGTGTCTCAACCTTAG 59.060 38.462 0.00 0.00 0.00 2.18
3015 3347 6.715264 CCCAAAATAAGTGTCTCAACCTTAGT 59.285 38.462 0.00 0.00 0.00 2.24
3016 3348 7.881232 CCCAAAATAAGTGTCTCAACCTTAGTA 59.119 37.037 0.00 0.00 0.00 1.82
3017 3349 8.718734 CCAAAATAAGTGTCTCAACCTTAGTAC 58.281 37.037 0.00 0.00 0.00 2.73
3018 3350 9.490379 CAAAATAAGTGTCTCAACCTTAGTACT 57.510 33.333 0.00 0.00 0.00 2.73
3019 3351 9.708092 AAAATAAGTGTCTCAACCTTAGTACTC 57.292 33.333 0.00 0.00 0.00 2.59
3020 3352 5.725325 AAGTGTCTCAACCTTAGTACTCC 57.275 43.478 0.00 0.00 0.00 3.85
3021 3353 4.087907 AGTGTCTCAACCTTAGTACTCCC 58.912 47.826 0.00 0.00 0.00 4.30
3022 3354 4.087907 GTGTCTCAACCTTAGTACTCCCT 58.912 47.826 0.00 0.00 0.00 4.20
3023 3355 4.158209 GTGTCTCAACCTTAGTACTCCCTC 59.842 50.000 0.00 0.00 0.00 4.30
3024 3356 4.044317 TGTCTCAACCTTAGTACTCCCTCT 59.956 45.833 0.00 0.00 0.00 3.69
3025 3357 4.399934 GTCTCAACCTTAGTACTCCCTCTG 59.600 50.000 0.00 0.00 0.00 3.35
3026 3358 4.044317 TCTCAACCTTAGTACTCCCTCTGT 59.956 45.833 0.00 0.00 0.00 3.41
3027 3359 4.748701 TCAACCTTAGTACTCCCTCTGTT 58.251 43.478 0.00 0.00 0.00 3.16
3028 3360 4.771054 TCAACCTTAGTACTCCCTCTGTTC 59.229 45.833 0.00 0.00 0.00 3.18
3029 3361 4.399483 ACCTTAGTACTCCCTCTGTTCA 57.601 45.455 0.00 0.00 0.00 3.18
3030 3362 4.087907 ACCTTAGTACTCCCTCTGTTCAC 58.912 47.826 0.00 0.00 0.00 3.18
3031 3363 4.202695 ACCTTAGTACTCCCTCTGTTCACT 60.203 45.833 0.00 0.00 0.00 3.41
3032 3364 4.773149 CCTTAGTACTCCCTCTGTTCACTT 59.227 45.833 0.00 0.00 0.00 3.16
3033 3365 5.246429 CCTTAGTACTCCCTCTGTTCACTTT 59.754 44.000 0.00 0.00 0.00 2.66
3034 3366 6.239629 CCTTAGTACTCCCTCTGTTCACTTTT 60.240 42.308 0.00 0.00 0.00 2.27
3035 3367 7.039223 CCTTAGTACTCCCTCTGTTCACTTTTA 60.039 40.741 0.00 0.00 0.00 1.52
3036 3368 6.936968 AGTACTCCCTCTGTTCACTTTTAT 57.063 37.500 0.00 0.00 0.00 1.40
3037 3369 9.537852 TTAGTACTCCCTCTGTTCACTTTTATA 57.462 33.333 0.00 0.00 0.00 0.98
3038 3370 8.431910 AGTACTCCCTCTGTTCACTTTTATAA 57.568 34.615 0.00 0.00 0.00 0.98
3039 3371 8.532819 AGTACTCCCTCTGTTCACTTTTATAAG 58.467 37.037 0.00 0.00 37.40 1.73
3040 3372 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
3041 3373 7.387643 ACTCCCTCTGTTCACTTTTATAAGAC 58.612 38.462 0.00 0.00 35.30 3.01
3042 3374 6.395629 TCCCTCTGTTCACTTTTATAAGACG 58.604 40.000 0.00 0.00 35.30 4.18
3043 3375 5.063564 CCCTCTGTTCACTTTTATAAGACGC 59.936 44.000 0.00 0.00 35.30 5.19
3044 3376 5.869888 CCTCTGTTCACTTTTATAAGACGCT 59.130 40.000 0.00 0.00 35.30 5.07
3045 3377 6.369065 CCTCTGTTCACTTTTATAAGACGCTT 59.631 38.462 0.00 0.00 35.30 4.68
3046 3378 7.095187 CCTCTGTTCACTTTTATAAGACGCTTT 60.095 37.037 0.00 0.00 35.30 3.51
3047 3379 8.821147 TCTGTTCACTTTTATAAGACGCTTTA 57.179 30.769 0.00 0.00 35.30 1.85
3048 3380 8.922676 TCTGTTCACTTTTATAAGACGCTTTAG 58.077 33.333 0.00 0.00 35.30 1.85
3049 3381 8.821147 TGTTCACTTTTATAAGACGCTTTAGA 57.179 30.769 0.00 0.00 35.30 2.10
3050 3382 8.706035 TGTTCACTTTTATAAGACGCTTTAGAC 58.294 33.333 0.00 0.00 35.30 2.59
3051 3383 8.706035 GTTCACTTTTATAAGACGCTTTAGACA 58.294 33.333 0.00 0.00 35.30 3.41
3052 3384 8.462143 TCACTTTTATAAGACGCTTTAGACAG 57.538 34.615 0.00 0.00 35.30 3.51
3053 3385 7.063074 TCACTTTTATAAGACGCTTTAGACAGC 59.937 37.037 0.00 0.00 35.30 4.40
3054 3386 6.872020 ACTTTTATAAGACGCTTTAGACAGCA 59.128 34.615 0.00 0.00 36.04 4.41
3055 3387 6.887376 TTTATAAGACGCTTTAGACAGCAG 57.113 37.500 0.00 0.00 40.09 4.24
3056 3388 2.086054 AAGACGCTTTAGACAGCAGG 57.914 50.000 0.00 0.00 40.09 4.85
3057 3389 1.257743 AGACGCTTTAGACAGCAGGA 58.742 50.000 0.00 0.00 40.09 3.86
3058 3390 1.618837 AGACGCTTTAGACAGCAGGAA 59.381 47.619 0.00 0.00 40.09 3.36
3059 3391 2.234908 AGACGCTTTAGACAGCAGGAAT 59.765 45.455 0.00 0.00 40.09 3.01
3060 3392 3.003480 GACGCTTTAGACAGCAGGAATT 58.997 45.455 0.00 0.00 40.09 2.17
3061 3393 2.744202 ACGCTTTAGACAGCAGGAATTG 59.256 45.455 0.00 0.00 40.09 2.32
3062 3394 3.002791 CGCTTTAGACAGCAGGAATTGA 58.997 45.455 0.00 0.00 40.09 2.57
3063 3395 3.436704 CGCTTTAGACAGCAGGAATTGAA 59.563 43.478 0.00 0.00 40.09 2.69
3064 3396 4.670221 CGCTTTAGACAGCAGGAATTGAAC 60.670 45.833 0.00 0.00 40.09 3.18
3065 3397 4.457257 GCTTTAGACAGCAGGAATTGAACT 59.543 41.667 0.00 0.00 39.83 3.01
3066 3398 5.618640 GCTTTAGACAGCAGGAATTGAACTG 60.619 44.000 0.00 0.00 39.83 3.16
3067 3399 3.498774 AGACAGCAGGAATTGAACTGT 57.501 42.857 0.00 0.00 43.93 3.55
3068 3400 3.825328 AGACAGCAGGAATTGAACTGTT 58.175 40.909 0.00 0.00 41.45 3.16
3069 3401 4.210331 AGACAGCAGGAATTGAACTGTTT 58.790 39.130 0.00 0.00 41.45 2.83
3070 3402 4.646492 AGACAGCAGGAATTGAACTGTTTT 59.354 37.500 0.00 0.00 41.45 2.43
3071 3403 4.685924 ACAGCAGGAATTGAACTGTTTTG 58.314 39.130 0.00 0.00 38.38 2.44
3072 3404 4.053295 CAGCAGGAATTGAACTGTTTTGG 58.947 43.478 0.00 0.00 37.07 3.28
3073 3405 3.070015 AGCAGGAATTGAACTGTTTTGGG 59.930 43.478 0.00 0.00 37.07 4.12
3074 3406 3.181466 GCAGGAATTGAACTGTTTTGGGT 60.181 43.478 0.00 0.00 37.07 4.51
3075 3407 4.370917 CAGGAATTGAACTGTTTTGGGTG 58.629 43.478 0.00 0.00 0.00 4.61
3076 3408 4.030216 AGGAATTGAACTGTTTTGGGTGT 58.970 39.130 0.00 0.00 0.00 4.16
3077 3409 4.469586 AGGAATTGAACTGTTTTGGGTGTT 59.530 37.500 0.00 0.00 0.00 3.32
3078 3410 4.570369 GGAATTGAACTGTTTTGGGTGTTG 59.430 41.667 0.00 0.00 0.00 3.33
3079 3411 4.817318 ATTGAACTGTTTTGGGTGTTGT 57.183 36.364 0.00 0.00 0.00 3.32
3080 3412 3.859411 TGAACTGTTTTGGGTGTTGTC 57.141 42.857 0.00 0.00 0.00 3.18
3081 3413 3.426615 TGAACTGTTTTGGGTGTTGTCT 58.573 40.909 0.00 0.00 0.00 3.41
3082 3414 3.829601 TGAACTGTTTTGGGTGTTGTCTT 59.170 39.130 0.00 0.00 0.00 3.01
3083 3415 5.010933 TGAACTGTTTTGGGTGTTGTCTTA 58.989 37.500 0.00 0.00 0.00 2.10
3084 3416 5.477291 TGAACTGTTTTGGGTGTTGTCTTAA 59.523 36.000 0.00 0.00 0.00 1.85
3085 3417 5.986501 ACTGTTTTGGGTGTTGTCTTAAA 57.013 34.783 0.00 0.00 0.00 1.52
3086 3418 6.538945 ACTGTTTTGGGTGTTGTCTTAAAT 57.461 33.333 0.00 0.00 0.00 1.40
3087 3419 6.941857 ACTGTTTTGGGTGTTGTCTTAAATT 58.058 32.000 0.00 0.00 0.00 1.82
3088 3420 7.390823 ACTGTTTTGGGTGTTGTCTTAAATTT 58.609 30.769 0.00 0.00 0.00 1.82
3089 3421 7.547722 ACTGTTTTGGGTGTTGTCTTAAATTTC 59.452 33.333 0.00 0.00 0.00 2.17
3090 3422 7.616313 TGTTTTGGGTGTTGTCTTAAATTTCT 58.384 30.769 0.00 0.00 0.00 2.52
3091 3423 8.750298 TGTTTTGGGTGTTGTCTTAAATTTCTA 58.250 29.630 0.00 0.00 0.00 2.10
3092 3424 9.589111 GTTTTGGGTGTTGTCTTAAATTTCTAA 57.411 29.630 0.00 0.00 0.00 2.10
3094 3426 9.589111 TTTGGGTGTTGTCTTAAATTTCTAAAC 57.411 29.630 0.00 0.00 0.00 2.01
3095 3427 7.419204 TGGGTGTTGTCTTAAATTTCTAAACG 58.581 34.615 0.00 0.00 0.00 3.60
3096 3428 6.859508 GGGTGTTGTCTTAAATTTCTAAACGG 59.140 38.462 0.00 0.00 0.00 4.44
3097 3429 7.420002 GGTGTTGTCTTAAATTTCTAAACGGT 58.580 34.615 0.00 0.00 0.00 4.83
3098 3430 7.588854 GGTGTTGTCTTAAATTTCTAAACGGTC 59.411 37.037 0.00 0.00 0.00 4.79
3099 3431 8.340443 GTGTTGTCTTAAATTTCTAAACGGTCT 58.660 33.333 0.00 0.00 0.00 3.85
3100 3432 8.895737 TGTTGTCTTAAATTTCTAAACGGTCTT 58.104 29.630 0.00 0.00 0.00 3.01
3103 3435 9.545105 TGTCTTAAATTTCTAAACGGTCTTACA 57.455 29.630 0.00 0.00 0.00 2.41
3109 3441 9.511144 AAATTTCTAAACGGTCTTACAAAAGTG 57.489 29.630 0.00 0.00 34.13 3.16
3110 3442 7.846644 TTTCTAAACGGTCTTACAAAAGTGA 57.153 32.000 0.00 0.00 34.13 3.41
3111 3443 7.846644 TTCTAAACGGTCTTACAAAAGTGAA 57.153 32.000 0.00 0.00 34.13 3.18
3112 3444 7.237920 TCTAAACGGTCTTACAAAAGTGAAC 57.762 36.000 0.00 0.00 34.13 3.18
3113 3445 4.525411 AACGGTCTTACAAAAGTGAACG 57.475 40.909 0.00 0.00 34.13 3.95
3114 3446 2.867975 ACGGTCTTACAAAAGTGAACGG 59.132 45.455 0.00 0.00 34.13 4.44
3115 3447 3.125316 CGGTCTTACAAAAGTGAACGGA 58.875 45.455 0.00 0.00 34.13 4.69
3116 3448 3.183775 CGGTCTTACAAAAGTGAACGGAG 59.816 47.826 0.00 0.00 34.13 4.63
3117 3449 3.497262 GGTCTTACAAAAGTGAACGGAGG 59.503 47.826 0.00 0.00 34.13 4.30
3118 3450 3.497262 GTCTTACAAAAGTGAACGGAGGG 59.503 47.826 0.00 0.00 34.13 4.30
3119 3451 3.388676 TCTTACAAAAGTGAACGGAGGGA 59.611 43.478 0.00 0.00 34.13 4.20
3120 3452 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
3121 3453 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
3122 3454 2.701951 ACAAAAGTGAACGGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
3123 3455 3.064931 CAAAAGTGAACGGAGGGAGTAC 58.935 50.000 0.00 0.00 0.00 2.73
3124 3456 2.005370 AAGTGAACGGAGGGAGTACA 57.995 50.000 0.00 0.00 0.00 2.90
3125 3457 2.005370 AGTGAACGGAGGGAGTACAA 57.995 50.000 0.00 0.00 0.00 2.41
3126 3458 1.617357 AGTGAACGGAGGGAGTACAAC 59.383 52.381 0.00 0.00 0.00 3.32
3127 3459 1.617357 GTGAACGGAGGGAGTACAACT 59.383 52.381 0.00 0.00 0.00 3.16
3128 3460 2.036862 GTGAACGGAGGGAGTACAACTT 59.963 50.000 0.00 0.00 0.00 2.66
3129 3461 2.701951 TGAACGGAGGGAGTACAACTTT 59.298 45.455 0.00 0.00 0.00 2.66
3130 3462 2.833631 ACGGAGGGAGTACAACTTTG 57.166 50.000 0.00 0.00 0.00 2.77
3131 3463 2.044758 ACGGAGGGAGTACAACTTTGT 58.955 47.619 0.00 0.00 44.86 2.83
3132 3464 3.233507 ACGGAGGGAGTACAACTTTGTA 58.766 45.455 0.00 0.00 42.35 2.41
3133 3465 3.836562 ACGGAGGGAGTACAACTTTGTAT 59.163 43.478 5.16 0.00 44.59 2.29
3134 3466 4.285260 ACGGAGGGAGTACAACTTTGTATT 59.715 41.667 5.16 1.19 44.59 1.89
3135 3467 5.221783 ACGGAGGGAGTACAACTTTGTATTT 60.222 40.000 5.16 0.00 44.59 1.40
3136 3468 6.014327 ACGGAGGGAGTACAACTTTGTATTTA 60.014 38.462 5.16 0.00 44.59 1.40
3137 3469 7.046033 CGGAGGGAGTACAACTTTGTATTTAT 58.954 38.462 5.16 0.00 44.59 1.40
3138 3470 7.551617 CGGAGGGAGTACAACTTTGTATTTATT 59.448 37.037 5.16 0.00 44.59 1.40
3139 3471 8.890718 GGAGGGAGTACAACTTTGTATTTATTC 58.109 37.037 5.16 2.52 44.59 1.75
3140 3472 8.803397 AGGGAGTACAACTTTGTATTTATTCC 57.197 34.615 5.16 7.64 44.59 3.01
3141 3473 8.387813 AGGGAGTACAACTTTGTATTTATTCCA 58.612 33.333 5.16 0.00 44.59 3.53
3142 3474 9.185680 GGGAGTACAACTTTGTATTTATTCCAT 57.814 33.333 5.16 0.00 44.59 3.41
3162 3494 7.878477 TCCATGTAAAGTTAGTACGAAGTTG 57.122 36.000 9.24 0.00 37.78 3.16
3163 3495 7.660112 TCCATGTAAAGTTAGTACGAAGTTGA 58.340 34.615 9.24 0.00 37.78 3.18
3164 3496 7.811236 TCCATGTAAAGTTAGTACGAAGTTGAG 59.189 37.037 9.24 0.23 37.78 3.02
3165 3497 7.811236 CCATGTAAAGTTAGTACGAAGTTGAGA 59.189 37.037 9.24 1.85 37.78 3.27
3166 3498 8.636843 CATGTAAAGTTAGTACGAAGTTGAGAC 58.363 37.037 9.24 8.64 37.78 3.36
3167 3499 7.706159 TGTAAAGTTAGTACGAAGTTGAGACA 58.294 34.615 9.24 10.60 37.78 3.41
3168 3500 7.645340 TGTAAAGTTAGTACGAAGTTGAGACAC 59.355 37.037 9.24 4.71 37.78 3.67
3169 3501 6.388435 AAGTTAGTACGAAGTTGAGACACT 57.612 37.500 7.86 0.00 37.78 3.55
3170 3502 6.388435 AGTTAGTACGAAGTTGAGACACTT 57.612 37.500 0.00 0.00 37.78 3.16
3171 3503 7.502120 AGTTAGTACGAAGTTGAGACACTTA 57.498 36.000 0.00 0.00 37.78 2.24
3172 3504 8.108551 AGTTAGTACGAAGTTGAGACACTTAT 57.891 34.615 0.00 0.00 37.78 1.73
3173 3505 8.574737 AGTTAGTACGAAGTTGAGACACTTATT 58.425 33.333 0.00 0.00 37.78 1.40
3174 3506 9.189723 GTTAGTACGAAGTTGAGACACTTATTT 57.810 33.333 0.00 0.00 37.78 1.40
3175 3507 9.754382 TTAGTACGAAGTTGAGACACTTATTTT 57.246 29.630 0.00 0.00 37.78 1.82
3176 3508 8.073355 AGTACGAAGTTGAGACACTTATTTTG 57.927 34.615 0.00 0.00 37.78 2.44
3177 3509 6.300354 ACGAAGTTGAGACACTTATTTTGG 57.700 37.500 0.00 0.00 37.78 3.28
3178 3510 5.238650 ACGAAGTTGAGACACTTATTTTGGG 59.761 40.000 0.00 0.00 37.78 4.12
3179 3511 5.468746 CGAAGTTGAGACACTTATTTTGGGA 59.531 40.000 0.00 0.00 37.11 4.37
3180 3512 6.565999 CGAAGTTGAGACACTTATTTTGGGAC 60.566 42.308 0.00 0.00 37.11 4.46
3181 3513 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
3182 3514 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
3183 3515 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
3184 3516 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
3185 3517 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3186 3518 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
3187 3519 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3188 3520 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3260 3592 4.456911 TGCTCAACTTAATCTCCTTTGCAG 59.543 41.667 0.00 0.00 0.00 4.41
3276 3608 9.774742 CTCCTTTGCAGATATTGTTTTACTTAC 57.225 33.333 0.00 0.00 0.00 2.34
3301 3633 7.342799 ACTTGGATATTGTAACCAATGAGCAAT 59.657 33.333 0.00 0.00 41.37 3.56
3405 3901 8.403236 AGAAGTTTGTAGTTGTTTTATTTCGCT 58.597 29.630 0.00 0.00 0.00 4.93
3406 3902 7.908193 AGTTTGTAGTTGTTTTATTTCGCTG 57.092 32.000 0.00 0.00 0.00 5.18
3476 3972 6.932356 ATCAGAGTATGCACCTTGTATTTG 57.068 37.500 0.00 0.00 0.00 2.32
3478 3974 6.941857 TCAGAGTATGCACCTTGTATTTGTA 58.058 36.000 0.00 0.00 0.00 2.41
3518 4014 4.817318 TTGCATTTTAATTCCTCCCCAC 57.183 40.909 0.00 0.00 0.00 4.61
3521 4017 2.517998 TTTTAATTCCTCCCCACCCG 57.482 50.000 0.00 0.00 0.00 5.28
3522 4018 0.033894 TTTAATTCCTCCCCACCCGC 60.034 55.000 0.00 0.00 0.00 6.13
3523 4019 1.208844 TTAATTCCTCCCCACCCGCA 61.209 55.000 0.00 0.00 0.00 5.69
3524 4020 1.917336 TAATTCCTCCCCACCCGCAC 61.917 60.000 0.00 0.00 0.00 5.34
3684 4186 4.400961 GCTGAAGGCCAGGAGCGT 62.401 66.667 5.01 0.00 45.17 5.07
3961 4463 0.946221 CAAGGCGAGCAACGTTCTCT 60.946 55.000 18.90 11.25 44.60 3.10
3966 4468 1.714794 CGAGCAACGTTCTCTTGGAT 58.285 50.000 18.90 0.00 37.22 3.41
3981 4483 0.451383 TGGATGCGAATTTCCAAGCG 59.549 50.000 0.00 0.00 0.00 4.68
4020 4522 3.689649 GGTTTGCGAAACTCATACCAGAT 59.310 43.478 0.00 0.00 41.14 2.90
4038 4540 1.841302 ATGGTGCGACCCATGTCACT 61.841 55.000 5.57 0.00 43.65 3.41
4056 4558 3.118038 TCACTACAAAGGTGAAAGGCACT 60.118 43.478 0.00 0.00 46.86 4.40
4098 4600 3.751246 GCGATGCTTGGCAAGGCA 61.751 61.111 27.25 23.68 43.62 4.75
4188 4690 3.310774 TCGAGAAGATAAACCCTACGACG 59.689 47.826 0.00 0.00 0.00 5.12
4224 4726 4.329545 TGGGCGCTTCCACTCACC 62.330 66.667 7.64 0.00 36.21 4.02
4227 4729 4.681978 GCGCTTCCACTCACCCGT 62.682 66.667 0.00 0.00 0.00 5.28
4277 4779 3.847621 GCTGGGGGATAGCTTTGC 58.152 61.111 0.00 0.00 38.14 3.68
4436 4938 2.224281 ACGATCTGTTCAAGCCTCAACA 60.224 45.455 0.00 0.00 0.00 3.33
4440 4942 1.581934 TGTTCAAGCCTCAACAGACG 58.418 50.000 0.00 0.00 0.00 4.18
4449 4951 0.389166 CTCAACAGACGACCAGCTCC 60.389 60.000 0.00 0.00 0.00 4.70
4551 5053 0.179161 CTGATTCGAGCGAGACGGTT 60.179 55.000 0.00 0.00 37.83 4.44
4646 5153 3.243234 TGCGTATGGTTGTTTCTTGTTGG 60.243 43.478 0.00 0.00 0.00 3.77
4647 5154 3.305110 CGTATGGTTGTTTCTTGTTGGC 58.695 45.455 0.00 0.00 0.00 4.52
4648 5155 3.243234 CGTATGGTTGTTTCTTGTTGGCA 60.243 43.478 0.00 0.00 0.00 4.92
4649 5156 3.902881 ATGGTTGTTTCTTGTTGGCAA 57.097 38.095 0.00 0.00 0.00 4.52
4673 5183 1.774217 TTGGGCCCTTCACCAGTCT 60.774 57.895 25.70 0.00 38.16 3.24
4742 5256 3.058224 GGTTGTGATGTGGCTTGTAAGAC 60.058 47.826 0.00 0.00 33.51 3.01
4773 5287 2.812011 ACTGGTTCCGACAATAACAAGC 59.188 45.455 0.00 0.00 30.98 4.01
4782 5297 4.154015 CCGACAATAACAAGCTGTTCATGA 59.846 41.667 14.76 0.00 40.22 3.07
4849 5364 3.494045 AACCTACGGTTAGCGACTTAC 57.506 47.619 11.70 0.00 44.94 2.34
4856 5371 2.409975 GGTTAGCGACTTACACTTGCA 58.590 47.619 0.00 0.00 0.00 4.08
4929 5444 5.822132 TCATGGTCAATGGGAAACAAAAT 57.178 34.783 0.00 0.00 36.86 1.82
5044 5638 1.168407 TATACTCCCTCCGTTCCGCG 61.168 60.000 0.00 0.00 40.95 6.46
5059 5653 4.555313 CGTTCCGCGATATAAGGTGTCTTA 60.555 45.833 8.23 0.00 44.77 2.10
5085 5712 5.854431 TTTTCAAAAGTCAAACTTGTGCC 57.146 34.783 5.32 0.00 41.96 5.01
5109 5737 9.104965 GCCTGTTTTACCAAGTTTTTAGAAAAT 57.895 29.630 0.00 0.00 0.00 1.82
5155 5784 6.662865 ACTTGTATCACTAGATCCATCCTG 57.337 41.667 0.00 0.00 35.67 3.86
5162 5793 6.566079 TCACTAGATCCATCCTGAAATGTT 57.434 37.500 0.00 0.00 0.00 2.71
5322 5955 8.635877 AATATAAGAGTCTGAAACAAGCTACG 57.364 34.615 0.00 0.00 0.00 3.51
5339 5972 5.491982 AGCTACGGACAAAATCTCTGAATT 58.508 37.500 0.00 0.00 0.00 2.17
5340 5973 5.352569 AGCTACGGACAAAATCTCTGAATTG 59.647 40.000 0.00 0.00 0.00 2.32
5341 5974 5.351465 GCTACGGACAAAATCTCTGAATTGA 59.649 40.000 0.00 0.00 0.00 2.57
5342 5975 5.613358 ACGGACAAAATCTCTGAATTGAC 57.387 39.130 0.00 0.00 0.00 3.18
5343 5976 5.063204 ACGGACAAAATCTCTGAATTGACA 58.937 37.500 0.00 0.00 0.00 3.58
5344 5977 5.530915 ACGGACAAAATCTCTGAATTGACAA 59.469 36.000 0.00 0.00 0.00 3.18
5345 5978 6.039270 ACGGACAAAATCTCTGAATTGACAAA 59.961 34.615 0.00 0.00 0.00 2.83
5346 5979 7.086376 CGGACAAAATCTCTGAATTGACAAAT 58.914 34.615 0.00 0.00 0.00 2.32
5347 5980 7.596248 CGGACAAAATCTCTGAATTGACAAATT 59.404 33.333 0.00 0.00 38.74 1.82
5348 5981 9.264719 GGACAAAATCTCTGAATTGACAAATTT 57.735 29.630 0.00 0.00 36.10 1.82
5375 6008 8.807667 ATACAAAGAAGAAAAATGCAAGACAG 57.192 30.769 0.00 0.00 0.00 3.51
5376 6009 6.633856 ACAAAGAAGAAAAATGCAAGACAGT 58.366 32.000 0.00 0.00 0.00 3.55
5377 6010 7.771183 ACAAAGAAGAAAAATGCAAGACAGTA 58.229 30.769 0.00 0.00 0.00 2.74
5378 6011 7.917505 ACAAAGAAGAAAAATGCAAGACAGTAG 59.082 33.333 0.00 0.00 0.00 2.57
5379 6012 7.573968 AAGAAGAAAAATGCAAGACAGTAGT 57.426 32.000 0.00 0.00 0.00 2.73
5380 6013 6.963796 AGAAGAAAAATGCAAGACAGTAGTG 58.036 36.000 0.00 0.00 0.00 2.74
5381 6014 5.113502 AGAAAAATGCAAGACAGTAGTGC 57.886 39.130 0.00 1.59 38.78 4.40
5390 6023 6.980593 TGCAAGACAGTAGTGCAAAATTAAT 58.019 32.000 7.96 0.00 44.88 1.40
5391 6024 7.432869 TGCAAGACAGTAGTGCAAAATTAATT 58.567 30.769 7.96 0.00 44.88 1.40
5393 6026 9.573133 GCAAGACAGTAGTGCAAAATTAATTAT 57.427 29.630 0.01 0.00 38.19 1.28
5412 6045 3.988379 ATAATAACAACGCATGCAGGG 57.012 42.857 19.57 8.22 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.164843 TGTTCATTTATGCTACTCCCCC 57.835 45.455 0.00 0.00 0.00 5.40
14 15 4.520492 CCATGTTCATTTATGCTACTCCCC 59.480 45.833 0.00 0.00 0.00 4.81
15 16 5.376625 TCCATGTTCATTTATGCTACTCCC 58.623 41.667 0.00 0.00 0.00 4.30
16 17 7.516198 AATCCATGTTCATTTATGCTACTCC 57.484 36.000 0.00 0.00 0.00 3.85
53 54 6.489675 CAGTGCTAATCGCTGTTCATTTATT 58.510 36.000 0.00 0.00 45.73 1.40
55 56 5.469373 CAGTGCTAATCGCTGTTCATTTA 57.531 39.130 0.00 0.00 45.73 1.40
65 66 4.115516 TCAGAGAAATCAGTGCTAATCGC 58.884 43.478 0.00 0.00 39.77 4.58
72 73 2.105006 TGGCTCAGAGAAATCAGTGC 57.895 50.000 0.00 0.00 0.00 4.40
82 83 6.145338 AGCAAAATATTCATTGGCTCAGAG 57.855 37.500 0.00 0.00 32.89 3.35
98 99 9.573133 GCATCTTACACTATTGTTTAGCAAAAT 57.427 29.630 0.00 0.00 40.91 1.82
222 224 9.722056 CACTTTGCTAAGATAAGCGAAAATAAT 57.278 29.630 14.98 0.00 43.60 1.28
223 225 8.726988 ACACTTTGCTAAGATAAGCGAAAATAA 58.273 29.630 14.98 0.00 43.60 1.40
225 227 7.145932 ACACTTTGCTAAGATAAGCGAAAAT 57.854 32.000 14.98 0.00 43.60 1.82
229 232 5.121768 GGAAACACTTTGCTAAGATAAGCGA 59.878 40.000 14.98 0.00 45.85 4.93
231 234 6.254281 TGGAAACACTTTGCTAAGATAAGC 57.746 37.500 14.98 1.43 38.12 3.09
243 246 4.889409 TGAGAAGATTGCTGGAAACACTTT 59.111 37.500 0.00 0.00 35.60 2.66
250 253 4.703575 CCAAAGATGAGAAGATTGCTGGAA 59.296 41.667 0.00 0.00 0.00 3.53
251 254 4.263639 ACCAAAGATGAGAAGATTGCTGGA 60.264 41.667 0.00 0.00 0.00 3.86
958 965 3.930012 CCCGCCCCGAATCTCTCC 61.930 72.222 0.00 0.00 0.00 3.71
1029 1038 2.892334 CGTTGCCACTCACCCGTTG 61.892 63.158 0.00 0.00 0.00 4.10
1059 1068 9.872721 GGAAATTACACTTCTACTTAGTAAGCT 57.127 33.333 9.92 0.65 0.00 3.74
1060 1069 8.805688 CGGAAATTACACTTCTACTTAGTAAGC 58.194 37.037 9.92 0.00 0.00 3.09
1061 1070 9.852091 ACGGAAATTACACTTCTACTTAGTAAG 57.148 33.333 8.41 8.41 0.00 2.34
1062 1071 9.630098 CACGGAAATTACACTTCTACTTAGTAA 57.370 33.333 0.00 0.00 0.00 2.24
1063 1072 7.756722 GCACGGAAATTACACTTCTACTTAGTA 59.243 37.037 0.00 0.00 0.00 1.82
1064 1073 6.589139 GCACGGAAATTACACTTCTACTTAGT 59.411 38.462 0.00 0.00 0.00 2.24
1065 1074 6.035758 GGCACGGAAATTACACTTCTACTTAG 59.964 42.308 0.00 0.00 0.00 2.18
1097 1106 2.342279 CGACGACCCAAGCTTCCA 59.658 61.111 0.00 0.00 0.00 3.53
1103 1112 1.818959 TACCCAACCGACGACCCAAG 61.819 60.000 0.00 0.00 0.00 3.61
1147 1197 1.032014 CAACCTCCCACACAAACCAG 58.968 55.000 0.00 0.00 0.00 4.00
1249 1299 3.203040 CCAACCTCAGTATTTCCCCAGAT 59.797 47.826 0.00 0.00 0.00 2.90
1473 1525 7.095439 GCAATGTTAGCACTCTATCCAACTATC 60.095 40.741 0.00 0.00 0.00 2.08
1517 1569 5.610398 TGAGCAGATTCAAGTACTTGTTGA 58.390 37.500 29.83 19.26 41.16 3.18
1542 1594 8.831550 GCCCTAAGAACAGATTATTAGAACTTG 58.168 37.037 3.59 0.00 40.57 3.16
1623 1685 0.108585 TCGCCAACTGAAGCTCCTTT 59.891 50.000 0.00 0.00 0.00 3.11
1689 1751 0.976073 GCTGGCCCCAGTAGACACTA 60.976 60.000 15.28 0.00 45.24 2.74
1990 2055 2.622942 TCCAGTTTGGATTGCTGTTCAC 59.377 45.455 0.00 0.00 42.67 3.18
2064 2129 3.518634 AGATGAAGGCGAGAGAAAGTC 57.481 47.619 0.00 0.00 0.00 3.01
2175 2240 5.866159 ATCTAGCTTGTGATCATGAGACA 57.134 39.130 0.00 3.82 0.00 3.41
2341 2673 3.326747 CAGAGTGTAAAAAGGACCGGAG 58.673 50.000 9.46 0.00 0.00 4.63
2342 2674 2.549349 GCAGAGTGTAAAAAGGACCGGA 60.549 50.000 9.46 0.00 0.00 5.14
2343 2675 1.804748 GCAGAGTGTAAAAAGGACCGG 59.195 52.381 0.00 0.00 0.00 5.28
2344 2676 2.223377 GTGCAGAGTGTAAAAAGGACCG 59.777 50.000 0.00 0.00 0.00 4.79
2345 2677 3.211045 TGTGCAGAGTGTAAAAAGGACC 58.789 45.455 0.00 0.00 0.00 4.46
2346 2678 5.215160 CAATGTGCAGAGTGTAAAAAGGAC 58.785 41.667 2.71 0.00 0.00 3.85
2347 2679 4.278170 CCAATGTGCAGAGTGTAAAAAGGA 59.722 41.667 10.56 0.00 0.00 3.36
2348 2680 4.278170 TCCAATGTGCAGAGTGTAAAAAGG 59.722 41.667 10.56 0.00 0.00 3.11
2349 2681 5.437289 TCCAATGTGCAGAGTGTAAAAAG 57.563 39.130 10.56 0.00 0.00 2.27
2350 2682 6.403866 AATCCAATGTGCAGAGTGTAAAAA 57.596 33.333 10.56 0.00 0.00 1.94
2351 2683 6.215121 CAAATCCAATGTGCAGAGTGTAAAA 58.785 36.000 10.56 0.00 0.00 1.52
2352 2684 5.771469 CAAATCCAATGTGCAGAGTGTAAA 58.229 37.500 10.56 0.00 0.00 2.01
2353 2685 4.321156 GCAAATCCAATGTGCAGAGTGTAA 60.321 41.667 10.56 0.00 38.19 2.41
2354 2686 3.191162 GCAAATCCAATGTGCAGAGTGTA 59.809 43.478 10.56 0.00 38.19 2.90
2355 2687 2.029649 GCAAATCCAATGTGCAGAGTGT 60.030 45.455 10.56 0.00 38.19 3.55
2356 2688 2.602878 GCAAATCCAATGTGCAGAGTG 58.397 47.619 4.03 4.03 38.19 3.51
2357 2689 1.547372 GGCAAATCCAATGTGCAGAGT 59.453 47.619 4.59 0.00 40.12 3.24
2358 2690 1.468565 CGGCAAATCCAATGTGCAGAG 60.469 52.381 4.59 0.00 40.12 3.35
2359 2691 0.527113 CGGCAAATCCAATGTGCAGA 59.473 50.000 4.59 0.00 40.12 4.26
2360 2692 0.527113 TCGGCAAATCCAATGTGCAG 59.473 50.000 4.59 0.65 40.12 4.41
2361 2693 0.964700 TTCGGCAAATCCAATGTGCA 59.035 45.000 4.59 0.00 40.12 4.57
2362 2694 1.994779 CTTTCGGCAAATCCAATGTGC 59.005 47.619 0.00 0.00 37.55 4.57
2363 2695 3.244976 GACTTTCGGCAAATCCAATGTG 58.755 45.455 0.00 0.00 34.01 3.21
2364 2696 2.890311 TGACTTTCGGCAAATCCAATGT 59.110 40.909 0.00 0.00 34.01 2.71
2365 2697 3.574284 TGACTTTCGGCAAATCCAATG 57.426 42.857 0.00 0.00 34.01 2.82
2366 2698 4.039124 AGTTTGACTTTCGGCAAATCCAAT 59.961 37.500 0.00 0.00 36.51 3.16
2367 2699 3.383185 AGTTTGACTTTCGGCAAATCCAA 59.617 39.130 0.00 0.00 36.51 3.53
2368 2700 2.955660 AGTTTGACTTTCGGCAAATCCA 59.044 40.909 0.00 0.00 36.51 3.41
2369 2701 3.643159 AGTTTGACTTTCGGCAAATCC 57.357 42.857 0.00 0.00 36.51 3.01
2370 2702 4.318050 GCAAAGTTTGACTTTCGGCAAATC 60.318 41.667 19.82 0.00 44.47 2.17
2371 2703 3.555547 GCAAAGTTTGACTTTCGGCAAAT 59.444 39.130 19.82 0.00 44.47 2.32
2372 2704 2.926838 GCAAAGTTTGACTTTCGGCAAA 59.073 40.909 19.82 0.00 44.47 3.68
2373 2705 2.165437 AGCAAAGTTTGACTTTCGGCAA 59.835 40.909 19.82 0.00 44.47 4.52
2374 2706 1.748493 AGCAAAGTTTGACTTTCGGCA 59.252 42.857 19.82 0.00 44.47 5.69
2375 2707 2.492019 AGCAAAGTTTGACTTTCGGC 57.508 45.000 19.82 5.65 44.47 5.54
2376 2708 5.169836 ACTTAGCAAAGTTTGACTTTCGG 57.830 39.130 19.82 8.79 44.47 4.30
2527 2859 5.474532 TCAATCTCATCCAACTTTGACCAAG 59.525 40.000 0.00 0.00 38.64 3.61
2528 2860 5.241506 GTCAATCTCATCCAACTTTGACCAA 59.758 40.000 0.00 0.00 37.86 3.67
2529 2861 4.761739 GTCAATCTCATCCAACTTTGACCA 59.238 41.667 0.00 0.00 37.86 4.02
2530 2862 5.006386 AGTCAATCTCATCCAACTTTGACC 58.994 41.667 9.31 0.00 42.29 4.02
2531 2863 6.566197 AAGTCAATCTCATCCAACTTTGAC 57.434 37.500 5.67 5.67 41.88 3.18
2532 2864 5.409520 CGAAGTCAATCTCATCCAACTTTGA 59.590 40.000 0.00 0.00 32.33 2.69
2533 2865 5.391310 CCGAAGTCAATCTCATCCAACTTTG 60.391 44.000 0.00 0.00 0.00 2.77
2534 2866 4.697352 CCGAAGTCAATCTCATCCAACTTT 59.303 41.667 0.00 0.00 0.00 2.66
2535 2867 4.020218 TCCGAAGTCAATCTCATCCAACTT 60.020 41.667 0.00 0.00 0.00 2.66
2536 2868 3.515502 TCCGAAGTCAATCTCATCCAACT 59.484 43.478 0.00 0.00 0.00 3.16
2537 2869 3.861840 TCCGAAGTCAATCTCATCCAAC 58.138 45.455 0.00 0.00 0.00 3.77
2538 2870 4.760530 ATCCGAAGTCAATCTCATCCAA 57.239 40.909 0.00 0.00 0.00 3.53
2539 2871 5.869649 TTATCCGAAGTCAATCTCATCCA 57.130 39.130 0.00 0.00 0.00 3.41
2540 2872 5.467063 GGTTTATCCGAAGTCAATCTCATCC 59.533 44.000 0.00 0.00 0.00 3.51
2541 2873 6.284459 AGGTTTATCCGAAGTCAATCTCATC 58.716 40.000 0.00 0.00 41.99 2.92
2542 2874 6.240549 AGGTTTATCCGAAGTCAATCTCAT 57.759 37.500 0.00 0.00 41.99 2.90
2543 2875 5.677319 AGGTTTATCCGAAGTCAATCTCA 57.323 39.130 0.00 0.00 41.99 3.27
2544 2876 9.930693 ATATTAGGTTTATCCGAAGTCAATCTC 57.069 33.333 0.00 0.00 41.99 2.75
2545 2877 9.712305 CATATTAGGTTTATCCGAAGTCAATCT 57.288 33.333 0.00 0.00 41.99 2.40
2546 2878 8.443937 GCATATTAGGTTTATCCGAAGTCAATC 58.556 37.037 0.00 0.00 41.99 2.67
2547 2879 7.936847 TGCATATTAGGTTTATCCGAAGTCAAT 59.063 33.333 0.00 0.00 41.99 2.57
2548 2880 7.276658 TGCATATTAGGTTTATCCGAAGTCAA 58.723 34.615 0.00 0.00 41.99 3.18
2549 2881 6.822442 TGCATATTAGGTTTATCCGAAGTCA 58.178 36.000 0.00 0.00 41.99 3.41
2550 2882 7.152645 TCTGCATATTAGGTTTATCCGAAGTC 58.847 38.462 0.00 0.00 41.99 3.01
2551 2883 7.062749 TCTGCATATTAGGTTTATCCGAAGT 57.937 36.000 0.00 0.00 41.99 3.01
2552 2884 7.155328 ACTCTGCATATTAGGTTTATCCGAAG 58.845 38.462 0.00 0.00 41.99 3.79
2553 2885 7.062749 ACTCTGCATATTAGGTTTATCCGAA 57.937 36.000 0.00 0.00 41.99 4.30
2554 2886 6.665992 ACTCTGCATATTAGGTTTATCCGA 57.334 37.500 0.00 0.00 41.99 4.55
2555 2887 8.827177 TTTACTCTGCATATTAGGTTTATCCG 57.173 34.615 0.00 0.00 41.99 4.18
2560 2892 8.957466 GTCCTTTTTACTCTGCATATTAGGTTT 58.043 33.333 0.00 0.00 0.00 3.27
2561 2893 8.329502 AGTCCTTTTTACTCTGCATATTAGGTT 58.670 33.333 0.00 0.00 0.00 3.50
2562 2894 7.770897 CAGTCCTTTTTACTCTGCATATTAGGT 59.229 37.037 0.00 0.00 0.00 3.08
2563 2895 7.227512 CCAGTCCTTTTTACTCTGCATATTAGG 59.772 40.741 0.00 0.00 0.00 2.69
2564 2896 7.987458 TCCAGTCCTTTTTACTCTGCATATTAG 59.013 37.037 0.00 0.00 0.00 1.73
2565 2897 7.857456 TCCAGTCCTTTTTACTCTGCATATTA 58.143 34.615 0.00 0.00 0.00 0.98
2566 2898 6.721318 TCCAGTCCTTTTTACTCTGCATATT 58.279 36.000 0.00 0.00 0.00 1.28
2567 2899 6.313519 TCCAGTCCTTTTTACTCTGCATAT 57.686 37.500 0.00 0.00 0.00 1.78
2568 2900 5.338381 CCTCCAGTCCTTTTTACTCTGCATA 60.338 44.000 0.00 0.00 0.00 3.14
2569 2901 4.566488 CCTCCAGTCCTTTTTACTCTGCAT 60.566 45.833 0.00 0.00 0.00 3.96
2570 2902 3.244561 CCTCCAGTCCTTTTTACTCTGCA 60.245 47.826 0.00 0.00 0.00 4.41
2571 2903 3.339141 CCTCCAGTCCTTTTTACTCTGC 58.661 50.000 0.00 0.00 0.00 4.26
2572 2904 3.583086 TCCCTCCAGTCCTTTTTACTCTG 59.417 47.826 0.00 0.00 0.00 3.35
2573 2905 3.841255 CTCCCTCCAGTCCTTTTTACTCT 59.159 47.826 0.00 0.00 0.00 3.24
2574 2906 3.583526 ACTCCCTCCAGTCCTTTTTACTC 59.416 47.826 0.00 0.00 0.00 2.59
2575 2907 3.599348 ACTCCCTCCAGTCCTTTTTACT 58.401 45.455 0.00 0.00 0.00 2.24
2576 2908 4.531339 AGTACTCCCTCCAGTCCTTTTTAC 59.469 45.833 0.00 0.00 0.00 2.01
2577 2909 4.759953 AGTACTCCCTCCAGTCCTTTTTA 58.240 43.478 0.00 0.00 0.00 1.52
2578 2910 3.599348 AGTACTCCCTCCAGTCCTTTTT 58.401 45.455 0.00 0.00 0.00 1.94
2579 2911 3.277416 AGTACTCCCTCCAGTCCTTTT 57.723 47.619 0.00 0.00 0.00 2.27
2580 2912 3.309994 CCTAGTACTCCCTCCAGTCCTTT 60.310 52.174 0.00 0.00 0.00 3.11
2581 2913 2.245287 CCTAGTACTCCCTCCAGTCCTT 59.755 54.545 0.00 0.00 0.00 3.36
2582 2914 1.854280 CCTAGTACTCCCTCCAGTCCT 59.146 57.143 0.00 0.00 0.00 3.85
2583 2915 1.570024 ACCTAGTACTCCCTCCAGTCC 59.430 57.143 0.00 0.00 0.00 3.85
2584 2916 2.025131 ACACCTAGTACTCCCTCCAGTC 60.025 54.545 0.00 0.00 0.00 3.51
2585 2917 2.001558 ACACCTAGTACTCCCTCCAGT 58.998 52.381 0.00 0.00 0.00 4.00
2586 2918 2.830651 ACACCTAGTACTCCCTCCAG 57.169 55.000 0.00 0.00 0.00 3.86
2587 2919 3.467843 TCTACACCTAGTACTCCCTCCA 58.532 50.000 0.00 0.00 0.00 3.86
2588 2920 4.516652 TTCTACACCTAGTACTCCCTCC 57.483 50.000 0.00 0.00 0.00 4.30
2589 2921 5.892686 ACATTTCTACACCTAGTACTCCCTC 59.107 44.000 0.00 0.00 0.00 4.30
2590 2922 5.840081 ACATTTCTACACCTAGTACTCCCT 58.160 41.667 0.00 0.00 0.00 4.20
2591 2923 7.651027 TTACATTTCTACACCTAGTACTCCC 57.349 40.000 0.00 0.00 0.00 4.30
2592 2924 9.530633 CATTTACATTTCTACACCTAGTACTCC 57.469 37.037 0.00 0.00 0.00 3.85
2595 2927 9.865321 TGTCATTTACATTTCTACACCTAGTAC 57.135 33.333 0.00 0.00 31.43 2.73
2655 2987 2.027377 AGTCAACCTCTTGCCTCATCTG 60.027 50.000 0.00 0.00 0.00 2.90
2932 3264 8.218423 TCCCTTTAATATGCTCATAGGATTCA 57.782 34.615 0.00 0.00 0.00 2.57
2959 3291 9.004231 AGGGAGTATTTAGGTATTCTGTTTCAT 57.996 33.333 0.00 0.00 0.00 2.57
2976 3308 4.586306 ATTTTGGGACGAAGGGAGTATT 57.414 40.909 0.00 0.00 0.00 1.89
2978 3310 4.533311 ACTTATTTTGGGACGAAGGGAGTA 59.467 41.667 0.00 0.00 0.00 2.59
2979 3311 3.329814 ACTTATTTTGGGACGAAGGGAGT 59.670 43.478 0.00 0.00 0.00 3.85
2980 3312 3.689649 CACTTATTTTGGGACGAAGGGAG 59.310 47.826 0.00 0.00 0.00 4.30
2981 3313 3.073356 ACACTTATTTTGGGACGAAGGGA 59.927 43.478 0.00 0.00 0.00 4.20
2982 3314 3.418047 ACACTTATTTTGGGACGAAGGG 58.582 45.455 0.00 0.00 0.00 3.95
2983 3315 4.324267 AGACACTTATTTTGGGACGAAGG 58.676 43.478 0.00 0.00 0.00 3.46
2984 3316 4.994852 TGAGACACTTATTTTGGGACGAAG 59.005 41.667 0.00 0.00 0.00 3.79
2985 3317 4.963373 TGAGACACTTATTTTGGGACGAA 58.037 39.130 0.00 0.00 0.00 3.85
2986 3318 4.610605 TGAGACACTTATTTTGGGACGA 57.389 40.909 0.00 0.00 0.00 4.20
2987 3319 4.083484 GGTTGAGACACTTATTTTGGGACG 60.083 45.833 0.00 0.00 0.00 4.79
2988 3320 5.070685 AGGTTGAGACACTTATTTTGGGAC 58.929 41.667 0.00 0.00 0.00 4.46
2989 3321 5.319043 AGGTTGAGACACTTATTTTGGGA 57.681 39.130 0.00 0.00 0.00 4.37
2990 3322 6.715264 ACTAAGGTTGAGACACTTATTTTGGG 59.285 38.462 0.00 0.00 0.00 4.12
2991 3323 7.745620 ACTAAGGTTGAGACACTTATTTTGG 57.254 36.000 0.00 0.00 0.00 3.28
2992 3324 9.490379 AGTACTAAGGTTGAGACACTTATTTTG 57.510 33.333 0.00 0.00 0.00 2.44
2993 3325 9.708092 GAGTACTAAGGTTGAGACACTTATTTT 57.292 33.333 0.00 0.00 0.00 1.82
2994 3326 8.312564 GGAGTACTAAGGTTGAGACACTTATTT 58.687 37.037 0.00 0.00 0.00 1.40
2995 3327 7.093421 GGGAGTACTAAGGTTGAGACACTTATT 60.093 40.741 0.00 0.00 0.00 1.40
2996 3328 6.380560 GGGAGTACTAAGGTTGAGACACTTAT 59.619 42.308 0.00 0.00 0.00 1.73
2997 3329 5.713861 GGGAGTACTAAGGTTGAGACACTTA 59.286 44.000 0.00 0.00 0.00 2.24
2998 3330 4.527427 GGGAGTACTAAGGTTGAGACACTT 59.473 45.833 0.00 0.00 0.00 3.16
2999 3331 4.087907 GGGAGTACTAAGGTTGAGACACT 58.912 47.826 0.00 0.00 0.00 3.55
3000 3332 4.087907 AGGGAGTACTAAGGTTGAGACAC 58.912 47.826 0.00 0.00 0.00 3.67
3001 3333 4.044317 AGAGGGAGTACTAAGGTTGAGACA 59.956 45.833 0.00 0.00 0.00 3.41
3002 3334 4.399934 CAGAGGGAGTACTAAGGTTGAGAC 59.600 50.000 0.00 0.00 0.00 3.36
3003 3335 4.044317 ACAGAGGGAGTACTAAGGTTGAGA 59.956 45.833 0.00 0.00 0.00 3.27
3004 3336 4.345854 ACAGAGGGAGTACTAAGGTTGAG 58.654 47.826 0.00 0.00 0.00 3.02
3005 3337 4.399483 ACAGAGGGAGTACTAAGGTTGA 57.601 45.455 0.00 0.00 0.00 3.18
3006 3338 4.527038 TGAACAGAGGGAGTACTAAGGTTG 59.473 45.833 0.00 0.00 0.00 3.77
3007 3339 4.527427 GTGAACAGAGGGAGTACTAAGGTT 59.473 45.833 0.00 0.00 0.00 3.50
3008 3340 4.087907 GTGAACAGAGGGAGTACTAAGGT 58.912 47.826 0.00 0.00 0.00 3.50
3009 3341 4.345854 AGTGAACAGAGGGAGTACTAAGG 58.654 47.826 0.00 0.00 0.00 2.69
3010 3342 5.986501 AAGTGAACAGAGGGAGTACTAAG 57.013 43.478 0.00 0.00 0.00 2.18
3011 3343 6.742559 AAAAGTGAACAGAGGGAGTACTAA 57.257 37.500 0.00 0.00 0.00 2.24
3012 3344 9.537852 TTATAAAAGTGAACAGAGGGAGTACTA 57.462 33.333 0.00 0.00 0.00 1.82
3013 3345 6.936968 ATAAAAGTGAACAGAGGGAGTACT 57.063 37.500 0.00 0.00 0.00 2.73
3014 3346 8.529476 TCTTATAAAAGTGAACAGAGGGAGTAC 58.471 37.037 0.00 0.00 34.13 2.73
3015 3347 8.529476 GTCTTATAAAAGTGAACAGAGGGAGTA 58.471 37.037 0.00 0.00 34.13 2.59
3016 3348 7.387643 GTCTTATAAAAGTGAACAGAGGGAGT 58.612 38.462 0.00 0.00 34.13 3.85
3017 3349 6.531948 CGTCTTATAAAAGTGAACAGAGGGAG 59.468 42.308 0.00 0.00 34.13 4.30
3018 3350 6.395629 CGTCTTATAAAAGTGAACAGAGGGA 58.604 40.000 0.00 0.00 34.13 4.20
3019 3351 5.063564 GCGTCTTATAAAAGTGAACAGAGGG 59.936 44.000 0.00 0.00 34.13 4.30
3020 3352 5.869888 AGCGTCTTATAAAAGTGAACAGAGG 59.130 40.000 0.00 0.00 34.13 3.69
3021 3353 6.952935 AGCGTCTTATAAAAGTGAACAGAG 57.047 37.500 0.00 0.00 34.13 3.35
3022 3354 7.724305 AAAGCGTCTTATAAAAGTGAACAGA 57.276 32.000 0.00 0.00 34.13 3.41
3023 3355 8.922676 TCTAAAGCGTCTTATAAAAGTGAACAG 58.077 33.333 0.00 0.00 34.13 3.16
3024 3356 8.706035 GTCTAAAGCGTCTTATAAAAGTGAACA 58.294 33.333 0.00 0.00 34.13 3.18
3025 3357 8.706035 TGTCTAAAGCGTCTTATAAAAGTGAAC 58.294 33.333 0.00 0.00 34.13 3.18
3026 3358 8.821147 TGTCTAAAGCGTCTTATAAAAGTGAA 57.179 30.769 0.00 0.00 34.13 3.18
3027 3359 7.063074 GCTGTCTAAAGCGTCTTATAAAAGTGA 59.937 37.037 0.00 0.00 32.07 3.41
3028 3360 7.148639 TGCTGTCTAAAGCGTCTTATAAAAGTG 60.149 37.037 0.00 0.00 46.65 3.16
3029 3361 6.872020 TGCTGTCTAAAGCGTCTTATAAAAGT 59.128 34.615 0.00 0.00 46.65 2.66
3030 3362 7.290857 TGCTGTCTAAAGCGTCTTATAAAAG 57.709 36.000 0.00 0.00 46.65 2.27
3031 3363 6.312918 CCTGCTGTCTAAAGCGTCTTATAAAA 59.687 38.462 0.00 0.00 46.65 1.52
3032 3364 5.810587 CCTGCTGTCTAAAGCGTCTTATAAA 59.189 40.000 0.00 0.00 46.65 1.40
3033 3365 5.126545 TCCTGCTGTCTAAAGCGTCTTATAA 59.873 40.000 0.00 0.00 46.65 0.98
3034 3366 4.643334 TCCTGCTGTCTAAAGCGTCTTATA 59.357 41.667 0.00 0.00 46.65 0.98
3035 3367 3.447586 TCCTGCTGTCTAAAGCGTCTTAT 59.552 43.478 0.00 0.00 46.65 1.73
3036 3368 2.823747 TCCTGCTGTCTAAAGCGTCTTA 59.176 45.455 0.00 0.00 46.65 2.10
3037 3369 1.618837 TCCTGCTGTCTAAAGCGTCTT 59.381 47.619 0.00 0.00 46.65 3.01
3038 3370 1.257743 TCCTGCTGTCTAAAGCGTCT 58.742 50.000 0.00 0.00 46.65 4.18
3039 3371 2.080286 TTCCTGCTGTCTAAAGCGTC 57.920 50.000 0.00 0.00 46.65 5.19
3040 3372 2.744202 CAATTCCTGCTGTCTAAAGCGT 59.256 45.455 0.00 0.00 46.65 5.07
3041 3373 3.002791 TCAATTCCTGCTGTCTAAAGCG 58.997 45.455 0.00 0.00 46.65 4.68
3042 3374 4.457257 AGTTCAATTCCTGCTGTCTAAAGC 59.543 41.667 0.00 0.00 43.82 3.51
3043 3375 5.471456 ACAGTTCAATTCCTGCTGTCTAAAG 59.529 40.000 0.00 0.00 35.78 1.85
3044 3376 5.376625 ACAGTTCAATTCCTGCTGTCTAAA 58.623 37.500 0.00 0.00 35.78 1.85
3045 3377 4.973168 ACAGTTCAATTCCTGCTGTCTAA 58.027 39.130 0.00 0.00 35.78 2.10
3046 3378 4.623932 ACAGTTCAATTCCTGCTGTCTA 57.376 40.909 0.00 0.00 35.78 2.59
3047 3379 3.498774 ACAGTTCAATTCCTGCTGTCT 57.501 42.857 0.00 0.00 35.78 3.41
3048 3380 4.574599 AAACAGTTCAATTCCTGCTGTC 57.425 40.909 0.00 0.00 39.19 3.51
3049 3381 4.441913 CCAAAACAGTTCAATTCCTGCTGT 60.442 41.667 0.00 0.00 41.51 4.40
3050 3382 4.053295 CCAAAACAGTTCAATTCCTGCTG 58.947 43.478 0.00 0.00 31.76 4.41
3051 3383 3.070015 CCCAAAACAGTTCAATTCCTGCT 59.930 43.478 0.00 0.00 31.76 4.24
3052 3384 3.181466 ACCCAAAACAGTTCAATTCCTGC 60.181 43.478 0.00 0.00 31.76 4.85
3053 3385 4.141959 ACACCCAAAACAGTTCAATTCCTG 60.142 41.667 0.00 0.00 34.82 3.86
3054 3386 4.030216 ACACCCAAAACAGTTCAATTCCT 58.970 39.130 0.00 0.00 0.00 3.36
3055 3387 4.400529 ACACCCAAAACAGTTCAATTCC 57.599 40.909 0.00 0.00 0.00 3.01
3056 3388 5.175127 ACAACACCCAAAACAGTTCAATTC 58.825 37.500 0.00 0.00 0.00 2.17
3057 3389 5.046663 AGACAACACCCAAAACAGTTCAATT 60.047 36.000 0.00 0.00 0.00 2.32
3058 3390 4.466015 AGACAACACCCAAAACAGTTCAAT 59.534 37.500 0.00 0.00 0.00 2.57
3059 3391 3.829601 AGACAACACCCAAAACAGTTCAA 59.170 39.130 0.00 0.00 0.00 2.69
3060 3392 3.426615 AGACAACACCCAAAACAGTTCA 58.573 40.909 0.00 0.00 0.00 3.18
3061 3393 4.450082 AAGACAACACCCAAAACAGTTC 57.550 40.909 0.00 0.00 0.00 3.01
3062 3394 5.986501 TTAAGACAACACCCAAAACAGTT 57.013 34.783 0.00 0.00 0.00 3.16
3063 3395 5.986501 TTTAAGACAACACCCAAAACAGT 57.013 34.783 0.00 0.00 0.00 3.55
3064 3396 7.763985 AGAAATTTAAGACAACACCCAAAACAG 59.236 33.333 0.00 0.00 0.00 3.16
3065 3397 7.616313 AGAAATTTAAGACAACACCCAAAACA 58.384 30.769 0.00 0.00 0.00 2.83
3066 3398 9.589111 TTAGAAATTTAAGACAACACCCAAAAC 57.411 29.630 0.00 0.00 0.00 2.43
3068 3400 9.589111 GTTTAGAAATTTAAGACAACACCCAAA 57.411 29.630 0.00 0.00 0.00 3.28
3069 3401 7.916450 CGTTTAGAAATTTAAGACAACACCCAA 59.084 33.333 0.00 0.00 0.00 4.12
3070 3402 7.419204 CGTTTAGAAATTTAAGACAACACCCA 58.581 34.615 0.00 0.00 0.00 4.51
3071 3403 6.859508 CCGTTTAGAAATTTAAGACAACACCC 59.140 38.462 0.00 0.00 0.00 4.61
3072 3404 7.420002 ACCGTTTAGAAATTTAAGACAACACC 58.580 34.615 0.00 0.00 0.00 4.16
3073 3405 8.340443 AGACCGTTTAGAAATTTAAGACAACAC 58.660 33.333 0.00 0.00 0.00 3.32
3074 3406 8.441312 AGACCGTTTAGAAATTTAAGACAACA 57.559 30.769 0.00 0.00 0.00 3.33
3077 3409 9.545105 TGTAAGACCGTTTAGAAATTTAAGACA 57.455 29.630 0.00 0.00 0.00 3.41
3083 3415 9.511144 CACTTTTGTAAGACCGTTTAGAAATTT 57.489 29.630 0.00 0.00 35.30 1.82
3084 3416 8.895737 TCACTTTTGTAAGACCGTTTAGAAATT 58.104 29.630 0.00 0.00 35.30 1.82
3085 3417 8.441312 TCACTTTTGTAAGACCGTTTAGAAAT 57.559 30.769 0.00 0.00 35.30 2.17
3086 3418 7.846644 TCACTTTTGTAAGACCGTTTAGAAA 57.153 32.000 0.00 0.00 35.30 2.52
3087 3419 7.464444 CGTTCACTTTTGTAAGACCGTTTAGAA 60.464 37.037 0.00 0.00 35.30 2.10
3088 3420 6.019640 CGTTCACTTTTGTAAGACCGTTTAGA 60.020 38.462 0.00 0.00 35.30 2.10
3089 3421 6.124759 CGTTCACTTTTGTAAGACCGTTTAG 58.875 40.000 0.00 0.00 35.30 1.85
3090 3422 5.006552 CCGTTCACTTTTGTAAGACCGTTTA 59.993 40.000 0.00 0.00 35.30 2.01
3091 3423 4.201841 CCGTTCACTTTTGTAAGACCGTTT 60.202 41.667 0.00 0.00 35.30 3.60
3092 3424 3.310501 CCGTTCACTTTTGTAAGACCGTT 59.689 43.478 0.00 0.00 35.30 4.44
3093 3425 2.867975 CCGTTCACTTTTGTAAGACCGT 59.132 45.455 0.00 0.00 35.30 4.83
3094 3426 3.125316 TCCGTTCACTTTTGTAAGACCG 58.875 45.455 0.00 0.00 35.30 4.79
3095 3427 3.497262 CCTCCGTTCACTTTTGTAAGACC 59.503 47.826 0.00 0.00 35.30 3.85
3096 3428 3.497262 CCCTCCGTTCACTTTTGTAAGAC 59.503 47.826 0.00 0.00 35.30 3.01
3097 3429 3.388676 TCCCTCCGTTCACTTTTGTAAGA 59.611 43.478 0.00 0.00 35.30 2.10
3098 3430 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
3099 3431 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
3100 3432 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
3101 3433 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
3102 3434 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
3103 3435 2.701951 TGTACTCCCTCCGTTCACTTTT 59.298 45.455 0.00 0.00 0.00 2.27
3104 3436 2.322658 TGTACTCCCTCCGTTCACTTT 58.677 47.619 0.00 0.00 0.00 2.66
3105 3437 2.005370 TGTACTCCCTCCGTTCACTT 57.995 50.000 0.00 0.00 0.00 3.16
3106 3438 1.617357 GTTGTACTCCCTCCGTTCACT 59.383 52.381 0.00 0.00 0.00 3.41
3107 3439 1.617357 AGTTGTACTCCCTCCGTTCAC 59.383 52.381 0.00 0.00 0.00 3.18
3108 3440 2.005370 AGTTGTACTCCCTCCGTTCA 57.995 50.000 0.00 0.00 0.00 3.18
3109 3441 3.064931 CAAAGTTGTACTCCCTCCGTTC 58.935 50.000 0.00 0.00 0.00 3.95
3110 3442 2.436911 ACAAAGTTGTACTCCCTCCGTT 59.563 45.455 0.00 0.00 40.16 4.44
3111 3443 2.044758 ACAAAGTTGTACTCCCTCCGT 58.955 47.619 0.00 0.00 40.16 4.69
3112 3444 2.833631 ACAAAGTTGTACTCCCTCCG 57.166 50.000 0.00 0.00 40.16 4.63
3113 3445 8.803397 AATAAATACAAAGTTGTACTCCCTCC 57.197 34.615 6.05 0.00 45.47 4.30
3114 3446 8.890718 GGAATAAATACAAAGTTGTACTCCCTC 58.109 37.037 6.05 2.17 45.47 4.30
3115 3447 8.387813 TGGAATAAATACAAAGTTGTACTCCCT 58.612 33.333 6.05 0.00 45.47 4.20
3116 3448 8.570068 TGGAATAAATACAAAGTTGTACTCCC 57.430 34.615 6.05 3.89 45.47 4.30
3136 3468 8.932791 CAACTTCGTACTAACTTTACATGGAAT 58.067 33.333 0.00 0.00 0.00 3.01
3137 3469 8.143193 TCAACTTCGTACTAACTTTACATGGAA 58.857 33.333 0.00 0.00 0.00 3.53
3138 3470 7.660112 TCAACTTCGTACTAACTTTACATGGA 58.340 34.615 0.00 0.00 0.00 3.41
3139 3471 7.811236 TCTCAACTTCGTACTAACTTTACATGG 59.189 37.037 0.00 0.00 0.00 3.66
3140 3472 8.636843 GTCTCAACTTCGTACTAACTTTACATG 58.363 37.037 0.00 0.00 0.00 3.21
3141 3473 8.355169 TGTCTCAACTTCGTACTAACTTTACAT 58.645 33.333 0.00 0.00 0.00 2.29
3142 3474 7.645340 GTGTCTCAACTTCGTACTAACTTTACA 59.355 37.037 0.00 0.00 0.00 2.41
3143 3475 7.859875 AGTGTCTCAACTTCGTACTAACTTTAC 59.140 37.037 0.00 0.00 0.00 2.01
3144 3476 7.934457 AGTGTCTCAACTTCGTACTAACTTTA 58.066 34.615 0.00 0.00 0.00 1.85
3145 3477 6.803642 AGTGTCTCAACTTCGTACTAACTTT 58.196 36.000 0.00 0.00 0.00 2.66
3146 3478 6.388435 AGTGTCTCAACTTCGTACTAACTT 57.612 37.500 0.00 0.00 0.00 2.66
3147 3479 6.388435 AAGTGTCTCAACTTCGTACTAACT 57.612 37.500 0.00 0.00 35.44 2.24
3148 3480 8.739649 AATAAGTGTCTCAACTTCGTACTAAC 57.260 34.615 0.00 0.00 40.77 2.34
3149 3481 9.754382 AAAATAAGTGTCTCAACTTCGTACTAA 57.246 29.630 0.00 0.00 40.77 2.24
3150 3482 9.188588 CAAAATAAGTGTCTCAACTTCGTACTA 57.811 33.333 0.00 0.00 40.77 1.82
3151 3483 7.170998 CCAAAATAAGTGTCTCAACTTCGTACT 59.829 37.037 0.00 0.00 40.77 2.73
3152 3484 7.288672 CCAAAATAAGTGTCTCAACTTCGTAC 58.711 38.462 0.00 0.00 40.77 3.67
3153 3485 6.425721 CCCAAAATAAGTGTCTCAACTTCGTA 59.574 38.462 0.00 0.00 40.77 3.43
3154 3486 5.238650 CCCAAAATAAGTGTCTCAACTTCGT 59.761 40.000 0.00 0.00 40.77 3.85
3155 3487 5.468746 TCCCAAAATAAGTGTCTCAACTTCG 59.531 40.000 0.00 0.00 40.77 3.79
3156 3488 6.565999 CGTCCCAAAATAAGTGTCTCAACTTC 60.566 42.308 0.00 0.00 40.77 3.01
3157 3489 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
3158 3490 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
3159 3491 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
3160 3492 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3161 3493 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
3162 3494 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
3163 3495 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3164 3496 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3165 3497 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
3166 3498 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3167 3499 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3168 3500 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3169 3501 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3170 3502 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3171 3503 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
3172 3504 1.203212 TCTACTCCCTCCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
3173 3505 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28
3174 3506 0.410663 TTCTACTCCCTCCGTCCCAA 59.589 55.000 0.00 0.00 0.00 4.12
3175 3507 0.033405 CTTCTACTCCCTCCGTCCCA 60.033 60.000 0.00 0.00 0.00 4.37
3176 3508 0.033306 ACTTCTACTCCCTCCGTCCC 60.033 60.000 0.00 0.00 0.00 4.46
3177 3509 1.849977 AACTTCTACTCCCTCCGTCC 58.150 55.000 0.00 0.00 0.00 4.79
3178 3510 4.888823 AGATAAACTTCTACTCCCTCCGTC 59.111 45.833 0.00 0.00 0.00 4.79
3179 3511 4.869451 AGATAAACTTCTACTCCCTCCGT 58.131 43.478 0.00 0.00 0.00 4.69
3180 3512 5.855740 AAGATAAACTTCTACTCCCTCCG 57.144 43.478 0.00 0.00 32.91 4.63
3236 3568 4.826733 TGCAAAGGAGATTAAGTTGAGCAA 59.173 37.500 0.00 0.00 0.00 3.91
3276 3608 6.698008 TGCTCATTGGTTACAATATCCAAG 57.302 37.500 0.00 0.00 45.24 3.61
3363 3698 7.141363 ACAAACTTCTCATGAAATGTAACAGC 58.859 34.615 0.00 0.00 46.80 4.40
3405 3901 7.814642 TGAAACGTAACAACTTAAAACTTCCA 58.185 30.769 0.00 0.00 0.00 3.53
3406 3902 7.964559 ACTGAAACGTAACAACTTAAAACTTCC 59.035 33.333 0.00 0.00 0.00 3.46
3476 3972 7.367285 TGCAATTTCTTGACTTTACATGGTAC 58.633 34.615 0.00 0.00 34.04 3.34
3478 3974 6.403866 TGCAATTTCTTGACTTTACATGGT 57.596 33.333 0.00 0.00 34.04 3.55
3518 4014 3.427503 GGAATAAACAGTTGATGTGCGGG 60.428 47.826 0.00 0.00 43.00 6.13
3521 4017 5.713025 ACATGGAATAAACAGTTGATGTGC 58.287 37.500 0.00 0.00 43.00 4.57
3522 4018 8.296000 TGTTACATGGAATAAACAGTTGATGTG 58.704 33.333 0.00 0.00 43.00 3.21
3523 4019 8.402798 TGTTACATGGAATAAACAGTTGATGT 57.597 30.769 0.00 0.00 46.97 3.06
3524 4020 8.729756 TCTGTTACATGGAATAAACAGTTGATG 58.270 33.333 18.30 0.00 44.00 3.07
3525 4021 8.862325 TCTGTTACATGGAATAAACAGTTGAT 57.138 30.769 18.30 0.00 44.00 2.57
3966 4468 2.175566 CGCGCTTGGAAATTCGCA 59.824 55.556 5.56 0.00 44.28 5.10
4038 4540 3.740115 GAGAGTGCCTTTCACCTTTGTA 58.260 45.455 0.00 0.00 46.81 2.41
4056 4558 3.818787 GGCGCGAGGTAACCGAGA 61.819 66.667 12.10 0.00 33.37 4.04
4098 4600 2.758736 AGACATCGCAGCTCTCTTTT 57.241 45.000 0.00 0.00 0.00 2.27
4188 4690 0.247736 ACTCGGTGATGGTGAGCTTC 59.752 55.000 0.00 0.00 32.98 3.86
4222 4724 0.468226 TTGAACTTCTGCTCACGGGT 59.532 50.000 0.00 0.00 0.00 5.28
4224 4726 1.151668 CCTTGAACTTCTGCTCACGG 58.848 55.000 0.00 0.00 0.00 4.94
4227 4729 3.307269 CCATCTCCTTGAACTTCTGCTCA 60.307 47.826 0.00 0.00 0.00 4.26
4277 4779 4.821589 GCTTCACCTCGGCCTCGG 62.822 72.222 0.00 2.94 36.95 4.63
4440 4942 3.775654 CCCTGGACGGAGCTGGTC 61.776 72.222 0.00 0.00 33.16 4.02
4646 5153 0.888619 GAAGGGCCCAAGTAACTTGC 59.111 55.000 27.56 0.00 39.85 4.01
4647 5154 1.886542 GTGAAGGGCCCAAGTAACTTG 59.113 52.381 27.56 0.00 40.75 3.16
4648 5155 1.203013 GGTGAAGGGCCCAAGTAACTT 60.203 52.381 27.56 7.33 0.00 2.66
4649 5156 0.404426 GGTGAAGGGCCCAAGTAACT 59.596 55.000 27.56 0.00 0.00 2.24
4673 5183 4.082408 CACGGAACCACAAGTACATCTCTA 60.082 45.833 0.00 0.00 0.00 2.43
4782 5297 7.736893 AGTTAAATTGAGTGAGTACAGGAACT 58.263 34.615 0.00 0.00 43.88 3.01
4849 5364 5.577945 AGTGAAAATGTCTTTTGTGCAAGTG 59.422 36.000 0.00 0.00 34.73 3.16
4856 5371 5.964758 TGCTTGAGTGAAAATGTCTTTTGT 58.035 33.333 0.00 0.00 34.73 2.83
4914 5429 6.690194 TTGGACAAATTTTGTTTCCCATTG 57.310 33.333 15.54 0.00 45.52 2.82
4929 5444 3.625853 TCTCCATGTGTGTTTGGACAAA 58.374 40.909 0.00 0.00 37.10 2.83
5078 5672 4.385358 AACTTGGTAAAACAGGCACAAG 57.615 40.909 0.00 0.00 40.66 3.16
5125 5754 9.988815 ATGGATCTAGTGATACAAGTTTGATAC 57.011 33.333 0.00 0.00 45.72 2.24
5304 5937 2.987821 GTCCGTAGCTTGTTTCAGACTC 59.012 50.000 0.00 0.00 0.00 3.36
5308 5941 4.545823 TTTTGTCCGTAGCTTGTTTCAG 57.454 40.909 0.00 0.00 0.00 3.02
5322 5955 8.822652 AATTTGTCAATTCAGAGATTTTGTCC 57.177 30.769 0.00 0.00 0.00 4.02
5349 5982 9.252962 CTGTCTTGCATTTTTCTTCTTTGTATT 57.747 29.630 0.00 0.00 0.00 1.89
5350 5983 8.416329 ACTGTCTTGCATTTTTCTTCTTTGTAT 58.584 29.630 0.00 0.00 0.00 2.29
5351 5984 7.771183 ACTGTCTTGCATTTTTCTTCTTTGTA 58.229 30.769 0.00 0.00 0.00 2.41
5352 5985 6.633856 ACTGTCTTGCATTTTTCTTCTTTGT 58.366 32.000 0.00 0.00 0.00 2.83
5353 5986 7.917505 ACTACTGTCTTGCATTTTTCTTCTTTG 59.082 33.333 0.00 0.00 0.00 2.77
5354 5987 7.917505 CACTACTGTCTTGCATTTTTCTTCTTT 59.082 33.333 0.00 0.00 0.00 2.52
5355 5988 7.420800 CACTACTGTCTTGCATTTTTCTTCTT 58.579 34.615 0.00 0.00 0.00 2.52
5356 5989 6.514048 GCACTACTGTCTTGCATTTTTCTTCT 60.514 38.462 8.29 0.00 36.22 2.85
5357 5990 5.626955 GCACTACTGTCTTGCATTTTTCTTC 59.373 40.000 8.29 0.00 36.22 2.87
5358 5991 5.067674 TGCACTACTGTCTTGCATTTTTCTT 59.932 36.000 11.10 0.00 41.29 2.52
5359 5992 4.580167 TGCACTACTGTCTTGCATTTTTCT 59.420 37.500 11.10 0.00 41.29 2.52
5360 5993 4.858935 TGCACTACTGTCTTGCATTTTTC 58.141 39.130 11.10 0.00 41.29 2.29
5361 5994 4.916983 TGCACTACTGTCTTGCATTTTT 57.083 36.364 11.10 0.00 41.29 1.94
5362 5995 4.916983 TTGCACTACTGTCTTGCATTTT 57.083 36.364 14.74 0.00 45.35 1.82
5363 5996 4.916983 TTTGCACTACTGTCTTGCATTT 57.083 36.364 14.74 0.00 45.35 2.32
5364 5997 4.916983 TTTTGCACTACTGTCTTGCATT 57.083 36.364 14.74 0.00 45.35 3.56
5365 5998 5.458041 AATTTTGCACTACTGTCTTGCAT 57.542 34.783 14.74 1.06 45.35 3.96
5366 5999 4.916983 AATTTTGCACTACTGTCTTGCA 57.083 36.364 11.10 11.10 44.40 4.08
5367 6000 7.873739 AATTAATTTTGCACTACTGTCTTGC 57.126 32.000 6.60 6.60 36.76 4.01
5390 6023 5.126779 TCCCTGCATGCGTTGTTATTATAA 58.873 37.500 14.09 0.00 0.00 0.98
5391 6024 4.709250 TCCCTGCATGCGTTGTTATTATA 58.291 39.130 14.09 0.00 0.00 0.98
5393 6026 2.992593 TCCCTGCATGCGTTGTTATTA 58.007 42.857 14.09 0.00 0.00 0.98
5400 6033 1.832883 TATGTTTCCCTGCATGCGTT 58.167 45.000 14.09 0.00 0.00 4.84
5403 6036 5.014808 AGATTTTATGTTTCCCTGCATGC 57.985 39.130 11.82 11.82 0.00 4.06
5407 6040 6.276091 GGAATGAGATTTTATGTTTCCCTGC 58.724 40.000 0.00 0.00 0.00 4.85
5412 6045 8.531146 TCCTTTGGGAATGAGATTTTATGTTTC 58.469 33.333 0.00 0.00 38.93 2.78



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.