Multiple sequence alignment - TraesCS6A01G180500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G180500 | chr6A | 100.000 | 4765 | 0 | 0 | 1 | 4765 | 204735420 | 204730656 | 0.000000e+00 | 8800.0 |
1 | TraesCS6A01G180500 | chr6A | 83.849 | 291 | 37 | 8 | 4450 | 4732 | 592431882 | 592431594 | 7.860000e-68 | 268.0 |
2 | TraesCS6A01G180500 | chr6D | 96.614 | 2983 | 79 | 7 | 1329 | 4293 | 143662493 | 143665471 | 0.000000e+00 | 4929.0 |
3 | TraesCS6A01G180500 | chr6D | 92.868 | 673 | 26 | 8 | 661 | 1331 | 143661752 | 143662404 | 0.000000e+00 | 957.0 |
4 | TraesCS6A01G180500 | chr6D | 89.785 | 186 | 16 | 3 | 4293 | 4478 | 143673593 | 143673775 | 7.970000e-58 | 235.0 |
5 | TraesCS6A01G180500 | chr6D | 83.000 | 100 | 9 | 7 | 4317 | 4413 | 152241170 | 152241264 | 3.060000e-12 | 84.2 |
6 | TraesCS6A01G180500 | chr6D | 82.105 | 95 | 10 | 6 | 4321 | 4413 | 152246570 | 152246659 | 1.840000e-09 | 75.0 |
7 | TraesCS6A01G180500 | chr6B | 96.909 | 1650 | 36 | 2 | 2249 | 3897 | 255981352 | 255982987 | 0.000000e+00 | 2750.0 |
8 | TraesCS6A01G180500 | chr6B | 97.139 | 664 | 17 | 2 | 1 | 662 | 714487182 | 714486519 | 0.000000e+00 | 1120.0 |
9 | TraesCS6A01G180500 | chr6B | 91.818 | 440 | 16 | 6 | 3893 | 4314 | 255997355 | 255997792 | 3.170000e-166 | 595.0 |
10 | TraesCS6A01G180500 | chr6B | 84.192 | 291 | 34 | 9 | 4451 | 4732 | 120821258 | 120821545 | 6.080000e-69 | 272.0 |
11 | TraesCS6A01G180500 | chr6B | 85.824 | 261 | 7 | 5 | 715 | 963 | 255981111 | 255981353 | 2.850000e-62 | 250.0 |
12 | TraesCS6A01G180500 | chr6B | 91.358 | 81 | 6 | 1 | 4302 | 4382 | 255997802 | 255997881 | 5.040000e-20 | 110.0 |
13 | TraesCS6A01G180500 | chr3B | 97.440 | 664 | 15 | 2 | 1 | 662 | 788948741 | 788949404 | 0.000000e+00 | 1131.0 |
14 | TraesCS6A01G180500 | chr3B | 84.722 | 288 | 36 | 6 | 4452 | 4732 | 749488632 | 749488918 | 1.010000e-71 | 281.0 |
15 | TraesCS6A01G180500 | chr2B | 97.440 | 664 | 15 | 2 | 1 | 662 | 216945575 | 216944912 | 0.000000e+00 | 1131.0 |
16 | TraesCS6A01G180500 | chr7A | 97.028 | 673 | 16 | 4 | 1 | 669 | 260315698 | 260315026 | 0.000000e+00 | 1129.0 |
17 | TraesCS6A01G180500 | chr7A | 96.837 | 664 | 19 | 2 | 1 | 662 | 672321558 | 672322221 | 0.000000e+00 | 1109.0 |
18 | TraesCS6A01G180500 | chr1B | 97.139 | 664 | 17 | 2 | 1 | 662 | 431182570 | 431181907 | 0.000000e+00 | 1120.0 |
19 | TraesCS6A01G180500 | chr2A | 96.837 | 664 | 19 | 2 | 1 | 662 | 93985260 | 93984597 | 0.000000e+00 | 1109.0 |
20 | TraesCS6A01G180500 | chr2A | 82.105 | 95 | 12 | 5 | 4321 | 4413 | 13412454 | 13412545 | 5.110000e-10 | 76.8 |
21 | TraesCS6A01G180500 | chr7B | 96.837 | 664 | 18 | 3 | 1 | 662 | 583379890 | 583380552 | 0.000000e+00 | 1107.0 |
22 | TraesCS6A01G180500 | chr3A | 96.818 | 660 | 19 | 2 | 1 | 658 | 389505059 | 389504400 | 0.000000e+00 | 1101.0 |
23 | TraesCS6A01G180500 | chr4D | 85.185 | 297 | 33 | 8 | 4441 | 4729 | 12695881 | 12696174 | 1.300000e-75 | 294.0 |
24 | TraesCS6A01G180500 | chr4D | 84.192 | 291 | 35 | 8 | 4450 | 4731 | 504283283 | 504283571 | 6.080000e-69 | 272.0 |
25 | TraesCS6A01G180500 | chr5D | 84.669 | 287 | 34 | 7 | 4450 | 4728 | 464614799 | 464614515 | 1.310000e-70 | 278.0 |
26 | TraesCS6A01G180500 | chr5D | 84.083 | 289 | 38 | 5 | 4451 | 4732 | 520111705 | 520111418 | 6.080000e-69 | 272.0 |
27 | TraesCS6A01G180500 | chr5A | 84.300 | 293 | 34 | 9 | 4449 | 4732 | 563420314 | 563420025 | 4.700000e-70 | 276.0 |
28 | TraesCS6A01G180500 | chr2D | 84.300 | 293 | 34 | 9 | 4449 | 4732 | 632777323 | 632777034 | 4.700000e-70 | 276.0 |
29 | TraesCS6A01G180500 | chrUn | 82.105 | 95 | 11 | 5 | 4321 | 4413 | 81292766 | 81292676 | 5.110000e-10 | 76.8 |
30 | TraesCS6A01G180500 | chr7D | 81.915 | 94 | 13 | 4 | 4321 | 4413 | 523387975 | 523387885 | 5.110000e-10 | 76.8 |
31 | TraesCS6A01G180500 | chr4A | 82.474 | 97 | 8 | 7 | 4321 | 4413 | 658103010 | 658102919 | 5.110000e-10 | 76.8 |
32 | TraesCS6A01G180500 | chr4A | 100.000 | 29 | 0 | 0 | 1028 | 1056 | 584522471 | 584522499 | 2.000000e-03 | 54.7 |
33 | TraesCS6A01G180500 | chr1D | 81.633 | 98 | 11 | 6 | 4319 | 4413 | 139136306 | 139136213 | 1.840000e-09 | 75.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6A01G180500 | chr6A | 204730656 | 204735420 | 4764 | True | 8800.0 | 8800 | 100.0000 | 1 | 4765 | 1 | chr6A.!!$R1 | 4764 |
1 | TraesCS6A01G180500 | chr6D | 143661752 | 143665471 | 3719 | False | 2943.0 | 4929 | 94.7410 | 661 | 4293 | 2 | chr6D.!!$F4 | 3632 |
2 | TraesCS6A01G180500 | chr6B | 255981111 | 255982987 | 1876 | False | 1500.0 | 2750 | 91.3665 | 715 | 3897 | 2 | chr6B.!!$F2 | 3182 |
3 | TraesCS6A01G180500 | chr6B | 714486519 | 714487182 | 663 | True | 1120.0 | 1120 | 97.1390 | 1 | 662 | 1 | chr6B.!!$R1 | 661 |
4 | TraesCS6A01G180500 | chr6B | 255997355 | 255997881 | 526 | False | 352.5 | 595 | 91.5880 | 3893 | 4382 | 2 | chr6B.!!$F3 | 489 |
5 | TraesCS6A01G180500 | chr3B | 788948741 | 788949404 | 663 | False | 1131.0 | 1131 | 97.4400 | 1 | 662 | 1 | chr3B.!!$F2 | 661 |
6 | TraesCS6A01G180500 | chr2B | 216944912 | 216945575 | 663 | True | 1131.0 | 1131 | 97.4400 | 1 | 662 | 1 | chr2B.!!$R1 | 661 |
7 | TraesCS6A01G180500 | chr7A | 260315026 | 260315698 | 672 | True | 1129.0 | 1129 | 97.0280 | 1 | 669 | 1 | chr7A.!!$R1 | 668 |
8 | TraesCS6A01G180500 | chr7A | 672321558 | 672322221 | 663 | False | 1109.0 | 1109 | 96.8370 | 1 | 662 | 1 | chr7A.!!$F1 | 661 |
9 | TraesCS6A01G180500 | chr1B | 431181907 | 431182570 | 663 | True | 1120.0 | 1120 | 97.1390 | 1 | 662 | 1 | chr1B.!!$R1 | 661 |
10 | TraesCS6A01G180500 | chr2A | 93984597 | 93985260 | 663 | True | 1109.0 | 1109 | 96.8370 | 1 | 662 | 1 | chr2A.!!$R1 | 661 |
11 | TraesCS6A01G180500 | chr7B | 583379890 | 583380552 | 662 | False | 1107.0 | 1107 | 96.8370 | 1 | 662 | 1 | chr7B.!!$F1 | 661 |
12 | TraesCS6A01G180500 | chr3A | 389504400 | 389505059 | 659 | True | 1101.0 | 1101 | 96.8180 | 1 | 658 | 1 | chr3A.!!$R1 | 657 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
911 | 928 | 0.178987 | TCCCTCTGCCTCGTATCTCC | 60.179 | 60.000 | 0.00 | 0.0 | 0.00 | 3.71 | F |
2127 | 2235 | 0.603569 | GAACGAGGAAGCAGACCTGA | 59.396 | 55.000 | 0.47 | 0.0 | 37.93 | 3.86 | F |
2456 | 2564 | 3.193263 | AGATGCTGTACGCTCTGAATTG | 58.807 | 45.455 | 10.27 | 0.0 | 40.11 | 2.32 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2630 | 2738 | 1.068434 | TCATGACAACGAGACTGTGCA | 59.932 | 47.619 | 0.00 | 0.0 | 0.00 | 4.57 | R |
3204 | 3312 | 0.251653 | TTGGACTCGAGGGCTGTACT | 60.252 | 55.000 | 18.41 | 0.0 | 0.00 | 2.73 | R |
4387 | 4535 | 0.106469 | TTTAGCACCACCACTTGCCA | 60.106 | 50.000 | 0.00 | 0.0 | 39.75 | 4.92 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
69 | 70 | 6.091718 | TGTAGTCTAGTTGCACACACATTA | 57.908 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
85 | 86 | 5.863397 | CACACATTAATGTTTAGTTGGCAGG | 59.137 | 40.000 | 18.50 | 5.60 | 39.39 | 4.85 |
235 | 236 | 5.900425 | AGTTGCACACACATTGATGTTTAA | 58.100 | 33.333 | 0.00 | 0.00 | 39.39 | 1.52 |
323 | 325 | 4.826733 | ACACATTGATGTTTAGTTGGCAGA | 59.173 | 37.500 | 0.00 | 0.00 | 39.39 | 4.26 |
377 | 379 | 5.234543 | GGGATATAGTTTTGAAGAGCACGTC | 59.765 | 44.000 | 0.00 | 0.00 | 0.00 | 4.34 |
504 | 506 | 1.890876 | TTCCAACTGATTGTGACCGG | 58.109 | 50.000 | 0.00 | 0.00 | 33.60 | 5.28 |
572 | 574 | 9.786105 | CAAAAATTACACACATGCATGTCTATA | 57.214 | 29.630 | 29.23 | 17.43 | 39.39 | 1.31 |
662 | 665 | 1.427592 | GCCGCTACGTAGACTCGTCT | 61.428 | 60.000 | 26.53 | 4.81 | 43.12 | 4.18 |
692 | 695 | 4.736473 | AGGCAACCAAAGTGTACCTTAAT | 58.264 | 39.130 | 0.00 | 0.00 | 31.05 | 1.40 |
695 | 698 | 6.099125 | AGGCAACCAAAGTGTACCTTAATTTT | 59.901 | 34.615 | 0.00 | 0.00 | 31.05 | 1.82 |
696 | 699 | 6.764085 | GGCAACCAAAGTGTACCTTAATTTTT | 59.236 | 34.615 | 0.00 | 0.00 | 31.48 | 1.94 |
770 | 773 | 3.394719 | GAGTGAACGGAGAAGAAAAGCT | 58.605 | 45.455 | 0.00 | 0.00 | 0.00 | 3.74 |
777 | 780 | 4.308265 | ACGGAGAAGAAAAGCTGTAGAAC | 58.692 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
778 | 781 | 4.202223 | ACGGAGAAGAAAAGCTGTAGAACA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
791 | 794 | 5.847670 | CTGTAGAACAGTAGAAGGCAAAC | 57.152 | 43.478 | 0.00 | 0.00 | 41.19 | 2.93 |
792 | 795 | 4.304110 | TGTAGAACAGTAGAAGGCAAACG | 58.696 | 43.478 | 0.00 | 0.00 | 0.00 | 3.60 |
793 | 796 | 3.746045 | AGAACAGTAGAAGGCAAACGA | 57.254 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
794 | 797 | 3.654414 | AGAACAGTAGAAGGCAAACGAG | 58.346 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
795 | 798 | 3.069729 | AGAACAGTAGAAGGCAAACGAGT | 59.930 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
825 | 828 | 0.248054 | GCTCTCTCTCACGCTTCTCG | 60.248 | 60.000 | 0.00 | 0.00 | 45.38 | 4.04 |
911 | 928 | 0.178987 | TCCCTCTGCCTCGTATCTCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1171 | 1188 | 1.672737 | CGCTGCTCACTGTTACATGGA | 60.673 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
1233 | 1250 | 6.878923 | CCACATGTGTTTGAAGTAGAAGGATA | 59.121 | 38.462 | 23.79 | 0.00 | 0.00 | 2.59 |
1241 | 1258 | 8.041323 | TGTTTGAAGTAGAAGGATACCAGATTC | 58.959 | 37.037 | 0.00 | 0.00 | 37.17 | 2.52 |
1306 | 1323 | 9.726438 | TTTAAAAACTTTTCTGGAATTGGTTCA | 57.274 | 25.926 | 0.00 | 0.00 | 36.01 | 3.18 |
1345 | 1453 | 7.022979 | CAGTAAACTGCGATCAAATTTCATCA | 58.977 | 34.615 | 2.85 | 0.00 | 37.15 | 3.07 |
1366 | 1474 | 9.987272 | TCATCAGTTATGATACTTCACCTTATG | 57.013 | 33.333 | 0.00 | 0.00 | 44.58 | 1.90 |
1376 | 1484 | 5.078411 | ACTTCACCTTATGTAGCAGTGAG | 57.922 | 43.478 | 0.00 | 0.00 | 38.58 | 3.51 |
1400 | 1508 | 4.585955 | TCTGAAGTTCAGTGTACTGTCC | 57.414 | 45.455 | 27.83 | 4.25 | 44.58 | 4.02 |
1501 | 1609 | 6.184789 | GGTTGTGACCATTTCCTTATCCTAA | 58.815 | 40.000 | 0.00 | 0.00 | 45.77 | 2.69 |
1570 | 1678 | 2.430465 | GCAGAAGCTGAGTTTCATGGA | 58.570 | 47.619 | 11.58 | 0.00 | 37.91 | 3.41 |
1576 | 1684 | 2.097825 | GCTGAGTTTCATGGAGGCATT | 58.902 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
1623 | 1731 | 3.926527 | TCCTCGTTTGATCAAATCAGTCG | 59.073 | 43.478 | 23.05 | 19.82 | 40.94 | 4.18 |
1706 | 1814 | 3.017323 | CTGGAGCGGCTATTTGCG | 58.983 | 61.111 | 0.60 | 0.00 | 44.05 | 4.85 |
1708 | 1816 | 1.493950 | CTGGAGCGGCTATTTGCGAG | 61.494 | 60.000 | 0.60 | 0.00 | 44.05 | 5.03 |
1998 | 2106 | 0.997932 | GCGAGTGAAGCAGATCAGTG | 59.002 | 55.000 | 0.00 | 0.00 | 33.17 | 3.66 |
2042 | 2150 | 2.636830 | CAAGACAGGACTATTGCCAGG | 58.363 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
2071 | 2179 | 4.517075 | AGCTTTGCTTTCTCAGAAGGTAAC | 59.483 | 41.667 | 0.00 | 0.00 | 33.89 | 2.50 |
2120 | 2228 | 3.131396 | GTTCAAGAAGAACGAGGAAGCA | 58.869 | 45.455 | 0.00 | 0.00 | 46.36 | 3.91 |
2127 | 2235 | 0.603569 | GAACGAGGAAGCAGACCTGA | 59.396 | 55.000 | 0.47 | 0.00 | 37.93 | 3.86 |
2153 | 2261 | 4.561530 | CGTTCAGAGATCAGGTCCAAAGAA | 60.562 | 45.833 | 0.00 | 0.00 | 0.00 | 2.52 |
2154 | 2262 | 5.308825 | GTTCAGAGATCAGGTCCAAAGAAA | 58.691 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
2158 | 2266 | 4.042684 | AGAGATCAGGTCCAAAGAAAAGCT | 59.957 | 41.667 | 0.00 | 0.00 | 0.00 | 3.74 |
2456 | 2564 | 3.193263 | AGATGCTGTACGCTCTGAATTG | 58.807 | 45.455 | 10.27 | 0.00 | 40.11 | 2.32 |
2630 | 2738 | 4.384647 | GGGAAGACACAGGAGCTCAATTAT | 60.385 | 45.833 | 17.19 | 0.00 | 0.00 | 1.28 |
2670 | 2778 | 8.988934 | GTCATGAACTTGAATCACAGTTACTTA | 58.011 | 33.333 | 0.00 | 1.51 | 0.00 | 2.24 |
2711 | 2819 | 4.922719 | AGTCTCTAGAAGCCGAATTAACG | 58.077 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
3204 | 3312 | 6.099159 | TGGATGATGAAATTTCAAGCACAA | 57.901 | 33.333 | 23.91 | 11.46 | 41.13 | 3.33 |
3227 | 3335 | 1.906574 | ACAGCCCTCGAGTCCAATTTA | 59.093 | 47.619 | 12.31 | 0.00 | 0.00 | 1.40 |
3457 | 3565 | 1.342074 | TCCAGTGAGACAACAGAGGG | 58.658 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3461 | 3569 | 1.837051 | TGAGACAACAGAGGGCGGT | 60.837 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
3482 | 3590 | 4.021544 | GGTATTGTAGGAGAGATGGAGCTG | 60.022 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
3500 | 3608 | 2.165845 | GCTGCCAGAGCTTCAAATTGAT | 59.834 | 45.455 | 0.00 | 0.00 | 45.21 | 2.57 |
3580 | 3688 | 6.053005 | TGACTAAGGATTTCTTCAAACACGT | 58.947 | 36.000 | 0.00 | 0.00 | 36.93 | 4.49 |
3600 | 3708 | 5.580691 | CACGTCAAAGCTGATTCTGGTATTA | 59.419 | 40.000 | 0.00 | 0.00 | 33.05 | 0.98 |
3853 | 3961 | 9.476202 | CAGAGTAGAGATATACCAGATAGATCG | 57.524 | 40.741 | 0.00 | 0.00 | 36.73 | 3.69 |
3911 | 4019 | 5.666718 | AGGATGAGATCTTCTCTGGTTGATT | 59.333 | 40.000 | 0.00 | 0.00 | 43.73 | 2.57 |
3917 | 4025 | 6.537355 | AGATCTTCTCTGGTTGATTTCACAA | 58.463 | 36.000 | 0.00 | 0.00 | 31.12 | 3.33 |
3980 | 4088 | 3.370315 | GGTCATCTGATCCTTTGTGCTCT | 60.370 | 47.826 | 0.00 | 0.00 | 0.00 | 4.09 |
3992 | 4100 | 6.272318 | TCCTTTGTGCTCTTTTTGTAATGTG | 58.728 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
4031 | 4139 | 5.241506 | TCAGATCTTTGTTCAATGTGTTCCC | 59.758 | 40.000 | 0.00 | 0.00 | 0.00 | 3.97 |
4032 | 4140 | 4.524328 | AGATCTTTGTTCAATGTGTTCCCC | 59.476 | 41.667 | 0.00 | 0.00 | 0.00 | 4.81 |
4104 | 4212 | 4.870426 | CGTCATGCCAAAACTACTACTGAT | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
4147 | 4255 | 2.355009 | GCAAAGTTGGTGCAGCGG | 60.355 | 61.111 | 11.91 | 0.00 | 41.80 | 5.52 |
4229 | 4354 | 6.490040 | AGATGGCTATCAAGTACTCTCTCTTC | 59.510 | 42.308 | 13.04 | 0.00 | 35.70 | 2.87 |
4300 | 4426 | 5.834239 | ACTCCGTAGTTCAAATTTACACG | 57.166 | 39.130 | 0.00 | 0.65 | 29.00 | 4.49 |
4332 | 4480 | 7.094508 | TGAGCATCAAACTGTTAGAAACAAA | 57.905 | 32.000 | 0.00 | 0.00 | 45.97 | 2.83 |
4352 | 4500 | 2.499685 | GGCCTAGCCCACGTACAG | 59.500 | 66.667 | 0.00 | 0.00 | 44.06 | 2.74 |
4373 | 4521 | 9.813080 | GTACAGTGTCTGAAATTTCAAATAGAC | 57.187 | 33.333 | 20.82 | 21.63 | 36.64 | 2.59 |
4374 | 4522 | 7.576236 | ACAGTGTCTGAAATTTCAAATAGACG | 58.424 | 34.615 | 20.82 | 13.45 | 36.64 | 4.18 |
4382 | 4530 | 7.831753 | TGAAATTTCAAATAGACGCCCATAAA | 58.168 | 30.769 | 18.45 | 0.00 | 33.55 | 1.40 |
4383 | 4531 | 7.757624 | TGAAATTTCAAATAGACGCCCATAAAC | 59.242 | 33.333 | 18.45 | 0.00 | 33.55 | 2.01 |
4384 | 4532 | 6.767524 | ATTTCAAATAGACGCCCATAAACA | 57.232 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
4385 | 4533 | 6.576662 | TTTCAAATAGACGCCCATAAACAA | 57.423 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
4386 | 4534 | 6.576662 | TTCAAATAGACGCCCATAAACAAA | 57.423 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
4387 | 4535 | 6.767524 | TCAAATAGACGCCCATAAACAAAT | 57.232 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
4388 | 4536 | 6.559810 | TCAAATAGACGCCCATAAACAAATG | 58.440 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
4389 | 4537 | 5.514274 | AATAGACGCCCATAAACAAATGG | 57.486 | 39.130 | 0.00 | 0.00 | 45.20 | 3.16 |
4390 | 4538 | 1.476488 | AGACGCCCATAAACAAATGGC | 59.524 | 47.619 | 0.00 | 0.00 | 44.40 | 4.40 |
4391 | 4539 | 1.203523 | GACGCCCATAAACAAATGGCA | 59.796 | 47.619 | 0.00 | 0.00 | 44.40 | 4.92 |
4392 | 4540 | 1.620819 | ACGCCCATAAACAAATGGCAA | 59.379 | 42.857 | 0.00 | 0.00 | 44.40 | 4.52 |
4393 | 4541 | 2.270047 | CGCCCATAAACAAATGGCAAG | 58.730 | 47.619 | 0.00 | 0.00 | 44.40 | 4.01 |
4394 | 4542 | 2.353605 | CGCCCATAAACAAATGGCAAGT | 60.354 | 45.455 | 0.00 | 0.00 | 44.40 | 3.16 |
4395 | 4543 | 3.002102 | GCCCATAAACAAATGGCAAGTG | 58.998 | 45.455 | 0.00 | 0.00 | 44.40 | 3.16 |
4396 | 4544 | 3.598299 | CCCATAAACAAATGGCAAGTGG | 58.402 | 45.455 | 0.00 | 0.00 | 44.40 | 4.00 |
4397 | 4545 | 3.007831 | CCCATAAACAAATGGCAAGTGGT | 59.992 | 43.478 | 0.00 | 0.00 | 44.40 | 4.16 |
4398 | 4546 | 3.995705 | CCATAAACAAATGGCAAGTGGTG | 59.004 | 43.478 | 0.00 | 0.00 | 40.07 | 4.17 |
4399 | 4547 | 2.618442 | AAACAAATGGCAAGTGGTGG | 57.382 | 45.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4400 | 4548 | 1.494960 | AACAAATGGCAAGTGGTGGT | 58.505 | 45.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4401 | 4549 | 0.752054 | ACAAATGGCAAGTGGTGGTG | 59.248 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4402 | 4550 | 0.600782 | CAAATGGCAAGTGGTGGTGC | 60.601 | 55.000 | 0.00 | 0.00 | 40.14 | 5.01 |
4403 | 4551 | 0.760189 | AAATGGCAAGTGGTGGTGCT | 60.760 | 50.000 | 0.00 | 0.00 | 40.70 | 4.40 |
4404 | 4552 | 0.112218 | AATGGCAAGTGGTGGTGCTA | 59.888 | 50.000 | 0.00 | 0.00 | 40.70 | 3.49 |
4405 | 4553 | 0.112218 | ATGGCAAGTGGTGGTGCTAA | 59.888 | 50.000 | 0.00 | 0.00 | 40.70 | 3.09 |
4406 | 4554 | 0.106469 | TGGCAAGTGGTGGTGCTAAA | 60.106 | 50.000 | 0.00 | 0.00 | 40.70 | 1.85 |
4407 | 4555 | 0.598065 | GGCAAGTGGTGGTGCTAAAG | 59.402 | 55.000 | 0.00 | 0.00 | 40.70 | 1.85 |
4408 | 4556 | 1.318576 | GCAAGTGGTGGTGCTAAAGT | 58.681 | 50.000 | 0.00 | 0.00 | 37.78 | 2.66 |
4409 | 4557 | 1.681264 | GCAAGTGGTGGTGCTAAAGTT | 59.319 | 47.619 | 0.00 | 0.00 | 37.78 | 2.66 |
4410 | 4558 | 2.100749 | GCAAGTGGTGGTGCTAAAGTTT | 59.899 | 45.455 | 0.00 | 0.00 | 37.78 | 2.66 |
4411 | 4559 | 3.316868 | GCAAGTGGTGGTGCTAAAGTTTA | 59.683 | 43.478 | 0.00 | 0.00 | 37.78 | 2.01 |
4412 | 4560 | 4.556699 | GCAAGTGGTGGTGCTAAAGTTTAG | 60.557 | 45.833 | 16.87 | 16.87 | 37.78 | 1.85 |
4413 | 4561 | 4.699925 | AGTGGTGGTGCTAAAGTTTAGA | 57.300 | 40.909 | 23.89 | 8.37 | 0.00 | 2.10 |
4414 | 4562 | 4.642429 | AGTGGTGGTGCTAAAGTTTAGAG | 58.358 | 43.478 | 23.89 | 4.04 | 0.00 | 2.43 |
4415 | 4563 | 3.751698 | GTGGTGGTGCTAAAGTTTAGAGG | 59.248 | 47.826 | 23.89 | 1.78 | 0.00 | 3.69 |
4416 | 4564 | 3.649023 | TGGTGGTGCTAAAGTTTAGAGGA | 59.351 | 43.478 | 23.89 | 1.21 | 0.00 | 3.71 |
4417 | 4565 | 4.103469 | TGGTGGTGCTAAAGTTTAGAGGAA | 59.897 | 41.667 | 23.89 | 5.79 | 0.00 | 3.36 |
4418 | 4566 | 4.695928 | GGTGGTGCTAAAGTTTAGAGGAAG | 59.304 | 45.833 | 23.89 | 1.88 | 0.00 | 3.46 |
4419 | 4567 | 5.306394 | GTGGTGCTAAAGTTTAGAGGAAGT | 58.694 | 41.667 | 23.89 | 0.00 | 0.00 | 3.01 |
4420 | 4568 | 5.179555 | GTGGTGCTAAAGTTTAGAGGAAGTG | 59.820 | 44.000 | 23.89 | 0.00 | 0.00 | 3.16 |
4421 | 4569 | 5.163237 | TGGTGCTAAAGTTTAGAGGAAGTGT | 60.163 | 40.000 | 23.89 | 0.00 | 0.00 | 3.55 |
4422 | 4570 | 5.763698 | GGTGCTAAAGTTTAGAGGAAGTGTT | 59.236 | 40.000 | 23.89 | 0.00 | 0.00 | 3.32 |
4423 | 4571 | 6.262496 | GGTGCTAAAGTTTAGAGGAAGTGTTT | 59.738 | 38.462 | 23.89 | 0.00 | 0.00 | 2.83 |
4424 | 4572 | 7.353497 | GTGCTAAAGTTTAGAGGAAGTGTTTC | 58.647 | 38.462 | 23.89 | 4.61 | 0.00 | 2.78 |
4425 | 4573 | 7.012044 | GTGCTAAAGTTTAGAGGAAGTGTTTCA | 59.988 | 37.037 | 23.89 | 6.89 | 34.90 | 2.69 |
4426 | 4574 | 7.012044 | TGCTAAAGTTTAGAGGAAGTGTTTCAC | 59.988 | 37.037 | 23.89 | 4.06 | 34.90 | 3.18 |
4427 | 4575 | 6.694877 | AAAGTTTAGAGGAAGTGTTTCACC | 57.305 | 37.500 | 0.00 | 0.00 | 34.49 | 4.02 |
4428 | 4576 | 5.367945 | AGTTTAGAGGAAGTGTTTCACCA | 57.632 | 39.130 | 0.00 | 0.00 | 34.49 | 4.17 |
4429 | 4577 | 5.123936 | AGTTTAGAGGAAGTGTTTCACCAC | 58.876 | 41.667 | 0.00 | 0.00 | 34.49 | 4.16 |
4441 | 4589 | 7.266905 | AGTGTTTCACCACTTTATATAGGGT | 57.733 | 36.000 | 0.00 | 0.00 | 42.99 | 4.34 |
4443 | 4591 | 6.882678 | GTGTTTCACCACTTTATATAGGGTGT | 59.117 | 38.462 | 20.01 | 6.02 | 46.96 | 4.16 |
4444 | 4592 | 7.392393 | GTGTTTCACCACTTTATATAGGGTGTT | 59.608 | 37.037 | 20.01 | 4.20 | 46.96 | 3.32 |
4445 | 4593 | 7.608761 | TGTTTCACCACTTTATATAGGGTGTTC | 59.391 | 37.037 | 20.01 | 14.93 | 46.96 | 3.18 |
4446 | 4594 | 7.504926 | TTCACCACTTTATATAGGGTGTTCT | 57.495 | 36.000 | 20.01 | 0.00 | 46.96 | 3.01 |
4447 | 4595 | 7.120923 | TCACCACTTTATATAGGGTGTTCTC | 57.879 | 40.000 | 20.01 | 0.00 | 46.96 | 2.87 |
4448 | 4596 | 6.901300 | TCACCACTTTATATAGGGTGTTCTCT | 59.099 | 38.462 | 20.01 | 0.00 | 46.96 | 3.10 |
4449 | 4597 | 7.402071 | TCACCACTTTATATAGGGTGTTCTCTT | 59.598 | 37.037 | 20.01 | 0.00 | 46.96 | 2.85 |
4450 | 4598 | 8.047310 | CACCACTTTATATAGGGTGTTCTCTTT | 58.953 | 37.037 | 16.02 | 0.00 | 43.08 | 2.52 |
4451 | 4599 | 8.612145 | ACCACTTTATATAGGGTGTTCTCTTTT | 58.388 | 33.333 | 12.81 | 0.00 | 0.00 | 2.27 |
4452 | 4600 | 9.462606 | CCACTTTATATAGGGTGTTCTCTTTTT | 57.537 | 33.333 | 12.81 | 0.00 | 0.00 | 1.94 |
4482 | 4630 | 7.020914 | ACGAGAAATTTCCAATCTATTCAGC | 57.979 | 36.000 | 14.61 | 0.00 | 0.00 | 4.26 |
4483 | 4631 | 6.825721 | ACGAGAAATTTCCAATCTATTCAGCT | 59.174 | 34.615 | 14.61 | 0.00 | 0.00 | 4.24 |
4484 | 4632 | 7.337942 | ACGAGAAATTTCCAATCTATTCAGCTT | 59.662 | 33.333 | 14.61 | 0.00 | 0.00 | 3.74 |
4485 | 4633 | 8.186821 | CGAGAAATTTCCAATCTATTCAGCTTT | 58.813 | 33.333 | 14.61 | 0.00 | 0.00 | 3.51 |
4493 | 4641 | 9.631257 | TTCCAATCTATTCAGCTTTAATCATGA | 57.369 | 29.630 | 0.00 | 0.00 | 0.00 | 3.07 |
4494 | 4642 | 9.060347 | TCCAATCTATTCAGCTTTAATCATGAC | 57.940 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
4495 | 4643 | 8.843262 | CCAATCTATTCAGCTTTAATCATGACA | 58.157 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
4496 | 4644 | 9.880064 | CAATCTATTCAGCTTTAATCATGACAG | 57.120 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
4497 | 4645 | 9.624373 | AATCTATTCAGCTTTAATCATGACAGT | 57.376 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
4499 | 4647 | 9.534565 | TCTATTCAGCTTTAATCATGACAGTAC | 57.465 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
4500 | 4648 | 9.317936 | CTATTCAGCTTTAATCATGACAGTACA | 57.682 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
4501 | 4649 | 7.977789 | TTCAGCTTTAATCATGACAGTACAA | 57.022 | 32.000 | 0.00 | 0.00 | 0.00 | 2.41 |
4502 | 4650 | 7.364522 | TCAGCTTTAATCATGACAGTACAAC | 57.635 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4503 | 4651 | 6.934083 | TCAGCTTTAATCATGACAGTACAACA | 59.066 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
4504 | 4652 | 7.443879 | TCAGCTTTAATCATGACAGTACAACAA | 59.556 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
4505 | 4653 | 8.075574 | CAGCTTTAATCATGACAGTACAACAAA | 58.924 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
4506 | 4654 | 8.076178 | AGCTTTAATCATGACAGTACAACAAAC | 58.924 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
4507 | 4655 | 7.860373 | GCTTTAATCATGACAGTACAACAAACA | 59.140 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
4508 | 4656 | 9.169468 | CTTTAATCATGACAGTACAACAAACAC | 57.831 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
4509 | 4657 | 5.689383 | ATCATGACAGTACAACAAACACC | 57.311 | 39.130 | 0.00 | 0.00 | 0.00 | 4.16 |
4510 | 4658 | 4.518249 | TCATGACAGTACAACAAACACCA | 58.482 | 39.130 | 0.00 | 0.00 | 0.00 | 4.17 |
4511 | 4659 | 4.574421 | TCATGACAGTACAACAAACACCAG | 59.426 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
4512 | 4660 | 4.209307 | TGACAGTACAACAAACACCAGA | 57.791 | 40.909 | 0.00 | 0.00 | 0.00 | 3.86 |
4513 | 4661 | 4.580868 | TGACAGTACAACAAACACCAGAA | 58.419 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
4514 | 4662 | 5.004448 | TGACAGTACAACAAACACCAGAAA | 58.996 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
4515 | 4663 | 5.650266 | TGACAGTACAACAAACACCAGAAAT | 59.350 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
4516 | 4664 | 6.824196 | TGACAGTACAACAAACACCAGAAATA | 59.176 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
4517 | 4665 | 7.337184 | TGACAGTACAACAAACACCAGAAATAA | 59.663 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
4518 | 4666 | 8.232913 | ACAGTACAACAAACACCAGAAATAAT | 57.767 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
4519 | 4667 | 9.344772 | ACAGTACAACAAACACCAGAAATAATA | 57.655 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
4545 | 4693 | 7.931578 | AAATTACATCCAGATTCGTAAACCA | 57.068 | 32.000 | 0.00 | 0.00 | 0.00 | 3.67 |
4546 | 4694 | 8.519799 | AAATTACATCCAGATTCGTAAACCAT | 57.480 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
4547 | 4695 | 7.730364 | ATTACATCCAGATTCGTAAACCATC | 57.270 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4548 | 4696 | 5.359194 | ACATCCAGATTCGTAAACCATCT | 57.641 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
4549 | 4697 | 6.479972 | ACATCCAGATTCGTAAACCATCTA | 57.520 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
4550 | 4698 | 6.516718 | ACATCCAGATTCGTAAACCATCTAG | 58.483 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
4551 | 4699 | 4.945246 | TCCAGATTCGTAAACCATCTAGC | 58.055 | 43.478 | 0.00 | 0.00 | 0.00 | 3.42 |
4552 | 4700 | 3.736252 | CCAGATTCGTAAACCATCTAGCG | 59.264 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
4553 | 4701 | 4.499188 | CCAGATTCGTAAACCATCTAGCGA | 60.499 | 45.833 | 0.00 | 0.00 | 0.00 | 4.93 |
4554 | 4702 | 5.223382 | CAGATTCGTAAACCATCTAGCGAT | 58.777 | 41.667 | 0.00 | 0.00 | 0.00 | 4.58 |
4555 | 4703 | 5.117745 | CAGATTCGTAAACCATCTAGCGATG | 59.882 | 44.000 | 0.00 | 0.00 | 45.31 | 3.84 |
4566 | 4714 | 3.777465 | TCTAGCGATGACTACAACCAC | 57.223 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
4567 | 4715 | 3.353557 | TCTAGCGATGACTACAACCACT | 58.646 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
4568 | 4716 | 2.370281 | AGCGATGACTACAACCACTG | 57.630 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
4569 | 4717 | 1.893137 | AGCGATGACTACAACCACTGA | 59.107 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
4570 | 4718 | 2.299013 | AGCGATGACTACAACCACTGAA | 59.701 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
4571 | 4719 | 2.668457 | GCGATGACTACAACCACTGAAG | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4572 | 4720 | 2.668457 | CGATGACTACAACCACTGAAGC | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4573 | 4721 | 2.148916 | TGACTACAACCACTGAAGCG | 57.851 | 50.000 | 0.00 | 0.00 | 0.00 | 4.68 |
4574 | 4722 | 1.684450 | TGACTACAACCACTGAAGCGA | 59.316 | 47.619 | 0.00 | 0.00 | 0.00 | 4.93 |
4575 | 4723 | 2.101750 | TGACTACAACCACTGAAGCGAA | 59.898 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
4576 | 4724 | 3.244078 | TGACTACAACCACTGAAGCGAAT | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
4577 | 4725 | 3.326747 | ACTACAACCACTGAAGCGAATC | 58.673 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
4578 | 4726 | 1.148310 | ACAACCACTGAAGCGAATCG | 58.852 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
4579 | 4727 | 1.270094 | ACAACCACTGAAGCGAATCGA | 60.270 | 47.619 | 6.91 | 0.00 | 0.00 | 3.59 |
4580 | 4728 | 1.798223 | CAACCACTGAAGCGAATCGAA | 59.202 | 47.619 | 6.91 | 0.00 | 0.00 | 3.71 |
4581 | 4729 | 1.714794 | ACCACTGAAGCGAATCGAAG | 58.285 | 50.000 | 6.91 | 0.03 | 0.00 | 3.79 |
4582 | 4730 | 1.002366 | CCACTGAAGCGAATCGAAGG | 58.998 | 55.000 | 6.91 | 0.00 | 0.00 | 3.46 |
4583 | 4731 | 1.404181 | CCACTGAAGCGAATCGAAGGA | 60.404 | 52.381 | 6.91 | 0.00 | 0.00 | 3.36 |
4584 | 4732 | 1.923204 | CACTGAAGCGAATCGAAGGAG | 59.077 | 52.381 | 6.91 | 0.00 | 0.00 | 3.69 |
4585 | 4733 | 0.926846 | CTGAAGCGAATCGAAGGAGC | 59.073 | 55.000 | 6.91 | 0.00 | 0.00 | 4.70 |
4586 | 4734 | 0.802222 | TGAAGCGAATCGAAGGAGCG | 60.802 | 55.000 | 6.91 | 0.00 | 0.00 | 5.03 |
4587 | 4735 | 2.083599 | GAAGCGAATCGAAGGAGCGC | 62.084 | 60.000 | 6.91 | 0.00 | 44.97 | 5.92 |
4588 | 4736 | 3.631127 | GCGAATCGAAGGAGCGCC | 61.631 | 66.667 | 6.91 | 0.00 | 41.33 | 6.53 |
4589 | 4737 | 3.323136 | CGAATCGAAGGAGCGCCG | 61.323 | 66.667 | 2.29 | 0.00 | 39.96 | 6.46 |
4590 | 4738 | 3.631127 | GAATCGAAGGAGCGCCGC | 61.631 | 66.667 | 2.29 | 0.00 | 39.96 | 6.53 |
4608 | 4756 | 3.917760 | CGCCATCGTCCCTCCCTC | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
4609 | 4757 | 3.917760 | GCCATCGTCCCTCCCTCG | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
4610 | 4758 | 3.917760 | CCATCGTCCCTCCCTCGC | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
4611 | 4759 | 3.147595 | CATCGTCCCTCCCTCGCA | 61.148 | 66.667 | 0.00 | 0.00 | 0.00 | 5.10 |
4612 | 4760 | 2.835431 | ATCGTCCCTCCCTCGCAG | 60.835 | 66.667 | 0.00 | 0.00 | 0.00 | 5.18 |
4628 | 4776 | 2.856000 | AGGAGCCCTGGCACAACT | 60.856 | 61.111 | 11.38 | 0.00 | 44.88 | 3.16 |
4629 | 4777 | 2.116125 | GGAGCCCTGGCACAACTT | 59.884 | 61.111 | 11.38 | 0.00 | 44.88 | 2.66 |
4630 | 4778 | 2.270986 | GGAGCCCTGGCACAACTTG | 61.271 | 63.158 | 11.38 | 0.00 | 44.88 | 3.16 |
4631 | 4779 | 1.529244 | GAGCCCTGGCACAACTTGT | 60.529 | 57.895 | 11.38 | 0.00 | 44.88 | 3.16 |
4632 | 4780 | 0.250727 | GAGCCCTGGCACAACTTGTA | 60.251 | 55.000 | 11.38 | 0.00 | 44.88 | 2.41 |
4633 | 4781 | 0.250901 | AGCCCTGGCACAACTTGTAG | 60.251 | 55.000 | 11.38 | 0.00 | 44.88 | 2.74 |
4634 | 4782 | 0.250727 | GCCCTGGCACAACTTGTAGA | 60.251 | 55.000 | 2.58 | 0.00 | 38.70 | 2.59 |
4635 | 4783 | 1.523758 | CCCTGGCACAACTTGTAGAC | 58.476 | 55.000 | 0.00 | 0.00 | 38.70 | 2.59 |
4636 | 4784 | 1.202758 | CCCTGGCACAACTTGTAGACA | 60.203 | 52.381 | 0.00 | 0.00 | 38.70 | 3.41 |
4637 | 4785 | 2.146342 | CCTGGCACAACTTGTAGACAG | 58.854 | 52.381 | 15.19 | 15.19 | 38.70 | 3.51 |
4638 | 4786 | 2.485479 | CCTGGCACAACTTGTAGACAGT | 60.485 | 50.000 | 18.30 | 0.00 | 38.70 | 3.55 |
4639 | 4787 | 3.206150 | CTGGCACAACTTGTAGACAGTT | 58.794 | 45.455 | 14.42 | 0.00 | 38.70 | 3.16 |
4640 | 4788 | 2.942376 | TGGCACAACTTGTAGACAGTTG | 59.058 | 45.455 | 16.58 | 16.58 | 45.77 | 3.16 |
4641 | 4789 | 2.290641 | GGCACAACTTGTAGACAGTTGG | 59.709 | 50.000 | 19.70 | 13.54 | 44.92 | 3.77 |
4642 | 4790 | 3.202906 | GCACAACTTGTAGACAGTTGGA | 58.797 | 45.455 | 19.70 | 0.00 | 44.92 | 3.53 |
4643 | 4791 | 3.625764 | GCACAACTTGTAGACAGTTGGAA | 59.374 | 43.478 | 19.70 | 0.00 | 44.92 | 3.53 |
4644 | 4792 | 4.260784 | GCACAACTTGTAGACAGTTGGAAG | 60.261 | 45.833 | 19.70 | 13.73 | 44.92 | 3.46 |
4645 | 4793 | 4.876107 | CACAACTTGTAGACAGTTGGAAGT | 59.124 | 41.667 | 19.70 | 4.18 | 44.92 | 3.01 |
4646 | 4794 | 5.006746 | CACAACTTGTAGACAGTTGGAAGTC | 59.993 | 44.000 | 19.70 | 0.00 | 44.92 | 3.01 |
4647 | 4795 | 3.978687 | ACTTGTAGACAGTTGGAAGTCG | 58.021 | 45.455 | 0.00 | 0.00 | 39.67 | 4.18 |
4648 | 4796 | 3.383825 | ACTTGTAGACAGTTGGAAGTCGT | 59.616 | 43.478 | 0.00 | 0.00 | 39.67 | 4.34 |
4649 | 4797 | 3.637998 | TGTAGACAGTTGGAAGTCGTC | 57.362 | 47.619 | 0.00 | 0.00 | 39.67 | 4.20 |
4650 | 4798 | 2.031420 | TGTAGACAGTTGGAAGTCGTCG | 60.031 | 50.000 | 0.00 | 0.00 | 39.67 | 5.12 |
4651 | 4799 | 1.030457 | AGACAGTTGGAAGTCGTCGT | 58.970 | 50.000 | 0.00 | 0.00 | 39.67 | 4.34 |
4652 | 4800 | 1.129326 | GACAGTTGGAAGTCGTCGTG | 58.871 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4653 | 4801 | 0.458669 | ACAGTTGGAAGTCGTCGTGT | 59.541 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
4654 | 4802 | 1.134907 | ACAGTTGGAAGTCGTCGTGTT | 60.135 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
4655 | 4803 | 2.099592 | ACAGTTGGAAGTCGTCGTGTTA | 59.900 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
4656 | 4804 | 3.117794 | CAGTTGGAAGTCGTCGTGTTAA | 58.882 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
4657 | 4805 | 3.181774 | CAGTTGGAAGTCGTCGTGTTAAG | 59.818 | 47.826 | 0.00 | 0.00 | 0.00 | 1.85 |
4658 | 4806 | 2.427232 | TGGAAGTCGTCGTGTTAAGG | 57.573 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4659 | 4807 | 1.066136 | GGAAGTCGTCGTGTTAAGGC | 58.934 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4660 | 4808 | 1.066136 | GAAGTCGTCGTGTTAAGGCC | 58.934 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4661 | 4809 | 0.677842 | AAGTCGTCGTGTTAAGGCCT | 59.322 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4662 | 4810 | 0.243095 | AGTCGTCGTGTTAAGGCCTC | 59.757 | 55.000 | 5.23 | 0.00 | 0.00 | 4.70 |
4663 | 4811 | 0.038892 | GTCGTCGTGTTAAGGCCTCA | 60.039 | 55.000 | 5.23 | 0.00 | 0.00 | 3.86 |
4664 | 4812 | 0.892755 | TCGTCGTGTTAAGGCCTCAT | 59.107 | 50.000 | 5.23 | 0.00 | 0.00 | 2.90 |
4665 | 4813 | 2.093890 | TCGTCGTGTTAAGGCCTCATA | 58.906 | 47.619 | 5.23 | 0.00 | 0.00 | 2.15 |
4666 | 4814 | 2.098607 | TCGTCGTGTTAAGGCCTCATAG | 59.901 | 50.000 | 5.23 | 0.00 | 0.00 | 2.23 |
4667 | 4815 | 2.798499 | CGTCGTGTTAAGGCCTCATAGG | 60.798 | 54.545 | 5.23 | 0.00 | 38.80 | 2.57 |
4668 | 4816 | 2.429610 | GTCGTGTTAAGGCCTCATAGGA | 59.570 | 50.000 | 5.23 | 2.63 | 37.67 | 2.94 |
4669 | 4817 | 2.429610 | TCGTGTTAAGGCCTCATAGGAC | 59.570 | 50.000 | 5.23 | 0.00 | 46.64 | 3.85 |
4674 | 4822 | 4.857251 | GGCCTCATAGGACCAACG | 57.143 | 61.111 | 0.00 | 0.00 | 37.46 | 4.10 |
4675 | 4823 | 1.523938 | GGCCTCATAGGACCAACGC | 60.524 | 63.158 | 0.00 | 0.00 | 37.46 | 4.84 |
4676 | 4824 | 1.220749 | GCCTCATAGGACCAACGCA | 59.779 | 57.895 | 0.00 | 0.00 | 37.67 | 5.24 |
4677 | 4825 | 1.090052 | GCCTCATAGGACCAACGCAC | 61.090 | 60.000 | 0.00 | 0.00 | 37.67 | 5.34 |
4678 | 4826 | 0.462047 | CCTCATAGGACCAACGCACC | 60.462 | 60.000 | 0.00 | 0.00 | 37.67 | 5.01 |
4679 | 4827 | 0.249120 | CTCATAGGACCAACGCACCA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4680 | 4828 | 0.249120 | TCATAGGACCAACGCACCAG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4681 | 4829 | 0.249120 | CATAGGACCAACGCACCAGA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4682 | 4830 | 0.981183 | ATAGGACCAACGCACCAGAA | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4683 | 4831 | 0.320374 | TAGGACCAACGCACCAGAAG | 59.680 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4684 | 4832 | 1.070786 | GGACCAACGCACCAGAAGA | 59.929 | 57.895 | 0.00 | 0.00 | 0.00 | 2.87 |
4685 | 4833 | 0.951040 | GGACCAACGCACCAGAAGAG | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4686 | 4834 | 1.569479 | GACCAACGCACCAGAAGAGC | 61.569 | 60.000 | 0.00 | 0.00 | 0.00 | 4.09 |
4687 | 4835 | 1.597854 | CCAACGCACCAGAAGAGCA | 60.598 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
4688 | 4836 | 1.165907 | CCAACGCACCAGAAGAGCAA | 61.166 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
4689 | 4837 | 0.040958 | CAACGCACCAGAAGAGCAAC | 60.041 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4690 | 4838 | 1.166531 | AACGCACCAGAAGAGCAACC | 61.167 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
4691 | 4839 | 2.671177 | CGCACCAGAAGAGCAACCG | 61.671 | 63.158 | 0.00 | 0.00 | 0.00 | 4.44 |
4692 | 4840 | 2.970974 | GCACCAGAAGAGCAACCGC | 61.971 | 63.158 | 0.00 | 0.00 | 38.99 | 5.68 |
4693 | 4841 | 2.032681 | ACCAGAAGAGCAACCGCC | 59.967 | 61.111 | 0.00 | 0.00 | 39.83 | 6.13 |
4694 | 4842 | 3.121030 | CCAGAAGAGCAACCGCCG | 61.121 | 66.667 | 0.00 | 0.00 | 39.83 | 6.46 |
4695 | 4843 | 3.793144 | CAGAAGAGCAACCGCCGC | 61.793 | 66.667 | 0.00 | 0.00 | 39.83 | 6.53 |
4708 | 4856 | 3.479269 | GCCGCCGACGAAGACAAG | 61.479 | 66.667 | 0.00 | 0.00 | 43.93 | 3.16 |
4709 | 4857 | 2.049433 | CCGCCGACGAAGACAAGT | 60.049 | 61.111 | 0.00 | 0.00 | 43.93 | 3.16 |
4710 | 4858 | 1.663702 | CCGCCGACGAAGACAAGTT | 60.664 | 57.895 | 0.00 | 0.00 | 43.93 | 2.66 |
4711 | 4859 | 1.219522 | CCGCCGACGAAGACAAGTTT | 61.220 | 55.000 | 0.00 | 0.00 | 43.93 | 2.66 |
4712 | 4860 | 1.411394 | CGCCGACGAAGACAAGTTTA | 58.589 | 50.000 | 0.00 | 0.00 | 43.93 | 2.01 |
4713 | 4861 | 1.385743 | CGCCGACGAAGACAAGTTTAG | 59.614 | 52.381 | 0.00 | 0.00 | 43.93 | 1.85 |
4714 | 4862 | 2.669364 | GCCGACGAAGACAAGTTTAGA | 58.331 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
4715 | 4863 | 3.251571 | GCCGACGAAGACAAGTTTAGAT | 58.748 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
4716 | 4864 | 3.303760 | GCCGACGAAGACAAGTTTAGATC | 59.696 | 47.826 | 0.00 | 0.00 | 0.00 | 2.75 |
4717 | 4865 | 3.542704 | CCGACGAAGACAAGTTTAGATCG | 59.457 | 47.826 | 0.00 | 0.00 | 35.16 | 3.69 |
4718 | 4866 | 4.400845 | CGACGAAGACAAGTTTAGATCGA | 58.599 | 43.478 | 0.00 | 0.00 | 33.42 | 3.59 |
4719 | 4867 | 4.849926 | CGACGAAGACAAGTTTAGATCGAA | 59.150 | 41.667 | 0.00 | 0.00 | 33.42 | 3.71 |
4720 | 4868 | 5.341462 | CGACGAAGACAAGTTTAGATCGAAA | 59.659 | 40.000 | 0.00 | 0.00 | 33.42 | 3.46 |
4721 | 4869 | 6.033619 | CGACGAAGACAAGTTTAGATCGAAAT | 59.966 | 38.462 | 4.23 | 0.00 | 33.42 | 2.17 |
4722 | 4870 | 7.050281 | ACGAAGACAAGTTTAGATCGAAATG | 57.950 | 36.000 | 4.23 | 2.79 | 33.42 | 2.32 |
4723 | 4871 | 6.866770 | ACGAAGACAAGTTTAGATCGAAATGA | 59.133 | 34.615 | 4.23 | 0.00 | 33.42 | 2.57 |
4724 | 4872 | 7.545965 | ACGAAGACAAGTTTAGATCGAAATGAT | 59.454 | 33.333 | 4.23 | 0.00 | 41.06 | 2.45 |
4734 | 4882 | 3.808728 | GATCGAAATGATCCAACCTCCA | 58.191 | 45.455 | 0.00 | 0.00 | 46.55 | 3.86 |
4735 | 4883 | 2.985896 | TCGAAATGATCCAACCTCCAC | 58.014 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
4736 | 4884 | 2.304470 | TCGAAATGATCCAACCTCCACA | 59.696 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
4737 | 4885 | 2.420022 | CGAAATGATCCAACCTCCACAC | 59.580 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
4738 | 4886 | 3.690460 | GAAATGATCCAACCTCCACACT | 58.310 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
4739 | 4887 | 4.622933 | CGAAATGATCCAACCTCCACACTA | 60.623 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
4740 | 4888 | 4.927267 | AATGATCCAACCTCCACACTAA | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
4741 | 4889 | 4.927267 | ATGATCCAACCTCCACACTAAA | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
4742 | 4890 | 4.927267 | TGATCCAACCTCCACACTAAAT | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
4743 | 4891 | 4.588899 | TGATCCAACCTCCACACTAAATG | 58.411 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
4744 | 4892 | 4.288366 | TGATCCAACCTCCACACTAAATGA | 59.712 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
4745 | 4893 | 4.927267 | TCCAACCTCCACACTAAATGAT | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 2.45 |
4746 | 4894 | 4.588899 | TCCAACCTCCACACTAAATGATG | 58.411 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
4747 | 4895 | 4.042809 | TCCAACCTCCACACTAAATGATGT | 59.957 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
4748 | 4896 | 4.156556 | CCAACCTCCACACTAAATGATGTG | 59.843 | 45.833 | 0.00 | 0.00 | 44.79 | 3.21 |
4749 | 4897 | 4.640771 | ACCTCCACACTAAATGATGTGT | 57.359 | 40.909 | 3.89 | 0.00 | 46.79 | 3.72 |
4750 | 4898 | 4.985538 | ACCTCCACACTAAATGATGTGTT | 58.014 | 39.130 | 3.89 | 0.00 | 43.88 | 3.32 |
4751 | 4899 | 4.761739 | ACCTCCACACTAAATGATGTGTTG | 59.238 | 41.667 | 3.89 | 0.00 | 43.88 | 3.33 |
4752 | 4900 | 5.003160 | CCTCCACACTAAATGATGTGTTGA | 58.997 | 41.667 | 3.89 | 0.00 | 43.88 | 3.18 |
4753 | 4901 | 5.473162 | CCTCCACACTAAATGATGTGTTGAA | 59.527 | 40.000 | 3.89 | 0.00 | 43.88 | 2.69 |
4754 | 4902 | 6.016360 | CCTCCACACTAAATGATGTGTTGAAA | 60.016 | 38.462 | 3.89 | 0.00 | 43.88 | 2.69 |
4755 | 4903 | 6.969366 | TCCACACTAAATGATGTGTTGAAAG | 58.031 | 36.000 | 3.89 | 0.00 | 43.88 | 2.62 |
4756 | 4904 | 6.770303 | TCCACACTAAATGATGTGTTGAAAGA | 59.230 | 34.615 | 3.89 | 0.00 | 43.88 | 2.52 |
4757 | 4905 | 7.041167 | TCCACACTAAATGATGTGTTGAAAGAG | 60.041 | 37.037 | 3.89 | 0.00 | 43.88 | 2.85 |
4758 | 4906 | 7.041167 | CCACACTAAATGATGTGTTGAAAGAGA | 60.041 | 37.037 | 3.89 | 0.00 | 43.88 | 3.10 |
4759 | 4907 | 8.344831 | CACACTAAATGATGTGTTGAAAGAGAA | 58.655 | 33.333 | 0.00 | 0.00 | 43.88 | 2.87 |
4760 | 4908 | 8.902806 | ACACTAAATGATGTGTTGAAAGAGAAA | 58.097 | 29.630 | 0.00 | 0.00 | 43.88 | 2.52 |
4761 | 4909 | 9.903682 | CACTAAATGATGTGTTGAAAGAGAAAT | 57.096 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
69 | 70 | 4.729868 | AGTCTTCCTGCCAACTAAACATT | 58.270 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
323 | 325 | 4.922103 | GGATGTTTCGACGAACTAGTCTTT | 59.078 | 41.667 | 10.38 | 0.00 | 38.90 | 2.52 |
377 | 379 | 4.514577 | ACCGCTGGAATCCTCGCG | 62.515 | 66.667 | 22.74 | 22.74 | 41.20 | 5.87 |
596 | 599 | 3.067601 | CGGCCGGCCTAAAATAGAAATTT | 59.932 | 43.478 | 41.01 | 0.00 | 36.87 | 1.82 |
675 | 678 | 8.700973 | ACATGAAAAATTAAGGTACACTTTGGT | 58.299 | 29.630 | 0.00 | 0.00 | 40.64 | 3.67 |
770 | 773 | 4.038282 | TCGTTTGCCTTCTACTGTTCTACA | 59.962 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
777 | 780 | 4.143389 | CGTTTACTCGTTTGCCTTCTACTG | 60.143 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
778 | 781 | 3.985925 | CGTTTACTCGTTTGCCTTCTACT | 59.014 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
779 | 782 | 3.983344 | TCGTTTACTCGTTTGCCTTCTAC | 59.017 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
780 | 783 | 3.983344 | GTCGTTTACTCGTTTGCCTTCTA | 59.017 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
781 | 784 | 2.798847 | GTCGTTTACTCGTTTGCCTTCT | 59.201 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
782 | 785 | 2.540931 | TGTCGTTTACTCGTTTGCCTTC | 59.459 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
783 | 786 | 2.286025 | GTGTCGTTTACTCGTTTGCCTT | 59.714 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
784 | 787 | 1.862827 | GTGTCGTTTACTCGTTTGCCT | 59.137 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
785 | 788 | 1.593933 | TGTGTCGTTTACTCGTTTGCC | 59.406 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
786 | 789 | 2.887733 | CTGTGTCGTTTACTCGTTTGC | 58.112 | 47.619 | 0.00 | 0.00 | 0.00 | 3.68 |
787 | 790 | 2.538449 | AGCTGTGTCGTTTACTCGTTTG | 59.462 | 45.455 | 0.00 | 0.00 | 0.00 | 2.93 |
788 | 791 | 2.793232 | GAGCTGTGTCGTTTACTCGTTT | 59.207 | 45.455 | 0.00 | 0.00 | 0.00 | 3.60 |
789 | 792 | 2.034305 | AGAGCTGTGTCGTTTACTCGTT | 59.966 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
790 | 793 | 1.607628 | AGAGCTGTGTCGTTTACTCGT | 59.392 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
791 | 794 | 2.095668 | AGAGAGCTGTGTCGTTTACTCG | 60.096 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
792 | 795 | 3.189702 | AGAGAGAGCTGTGTCGTTTACTC | 59.810 | 47.826 | 2.12 | 0.00 | 0.00 | 2.59 |
793 | 796 | 3.150767 | AGAGAGAGCTGTGTCGTTTACT | 58.849 | 45.455 | 2.12 | 0.00 | 0.00 | 2.24 |
794 | 797 | 3.058155 | TGAGAGAGAGCTGTGTCGTTTAC | 60.058 | 47.826 | 2.12 | 0.00 | 0.00 | 2.01 |
795 | 798 | 3.058155 | GTGAGAGAGAGCTGTGTCGTTTA | 60.058 | 47.826 | 2.12 | 0.00 | 0.00 | 2.01 |
870 | 885 | 1.983224 | CGGGAGATGAGGTGTGGTT | 59.017 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
876 | 891 | 2.060980 | GGAGTGCGGGAGATGAGGT | 61.061 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
911 | 928 | 4.821589 | GGTGCGGAGGAAGGCGAG | 62.822 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
1171 | 1188 | 0.450184 | AAAACACGAACGCAAGCAGT | 59.550 | 45.000 | 0.00 | 0.00 | 45.62 | 4.40 |
1233 | 1250 | 3.517901 | TGAATTAGGACACCGAATCTGGT | 59.482 | 43.478 | 0.00 | 0.00 | 45.21 | 4.00 |
1241 | 1258 | 3.063997 | GCAGAACATGAATTAGGACACCG | 59.936 | 47.826 | 0.00 | 0.00 | 0.00 | 4.94 |
1287 | 1304 | 6.762661 | CACAATTGAACCAATTCCAGAAAAGT | 59.237 | 34.615 | 13.59 | 0.00 | 41.40 | 2.66 |
1306 | 1323 | 8.511321 | TCGCAGTTTACTGAATTTATCACAATT | 58.489 | 29.630 | 13.83 | 0.00 | 46.59 | 2.32 |
1345 | 1453 | 8.924303 | TGCTACATAAGGTGAAGTATCATAACT | 58.076 | 33.333 | 0.00 | 0.00 | 38.01 | 2.24 |
1366 | 1474 | 5.050490 | TGAACTTCAGAAACTCACTGCTAC | 58.950 | 41.667 | 0.00 | 0.00 | 35.61 | 3.58 |
1400 | 1508 | 8.925161 | TTGTTTTGTAAATGGAAGAACTGAAG | 57.075 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
1412 | 1520 | 9.695884 | AGCACGTAAAAATTTGTTTTGTAAATG | 57.304 | 25.926 | 0.00 | 0.00 | 0.00 | 2.32 |
1501 | 1609 | 7.175641 | GCAGGAAACAATGCATAAGTAGGATAT | 59.824 | 37.037 | 0.00 | 0.00 | 42.11 | 1.63 |
1570 | 1678 | 2.239150 | AGATGCTGAGTCTGAAATGCCT | 59.761 | 45.455 | 0.47 | 0.00 | 0.00 | 4.75 |
1706 | 1814 | 4.511826 | CCAGTGTCTAAACTTTGTGTCCTC | 59.488 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
1708 | 1816 | 4.035208 | CACCAGTGTCTAAACTTTGTGTCC | 59.965 | 45.833 | 0.00 | 0.00 | 30.81 | 4.02 |
1998 | 2106 | 3.269178 | CCTCAACCAGAAGCTTCAGATC | 58.731 | 50.000 | 27.57 | 1.21 | 0.00 | 2.75 |
2011 | 2119 | 1.455849 | CTGTCTTGCCCCTCAACCA | 59.544 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
2071 | 2179 | 5.466728 | TCTCGTTTGAGATTTTCCACTTCAG | 59.533 | 40.000 | 0.00 | 0.00 | 46.25 | 3.02 |
2127 | 2235 | 1.137872 | GGACCTGATCTCTGAACGCAT | 59.862 | 52.381 | 0.00 | 0.00 | 0.00 | 4.73 |
2240 | 2348 | 5.220548 | CGATTCATTTGATCTGGCGATATCC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2630 | 2738 | 1.068434 | TCATGACAACGAGACTGTGCA | 59.932 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
2670 | 2778 | 2.907042 | ACTCGACCTTCTCCATTTCCTT | 59.093 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
2711 | 2819 | 9.818796 | CTATGTTCTAAGCTCTGTTTTTCTTTC | 57.181 | 33.333 | 0.00 | 0.00 | 0.00 | 2.62 |
3204 | 3312 | 0.251653 | TTGGACTCGAGGGCTGTACT | 60.252 | 55.000 | 18.41 | 0.00 | 0.00 | 2.73 |
3227 | 3335 | 4.823989 | GCCTCCAGTTGATTATGCTTATGT | 59.176 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
3359 | 3467 | 1.010046 | TCCCTCTCCTTCACATCCCAT | 59.990 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
3457 | 3565 | 2.891580 | TCCATCTCTCCTACAATACCGC | 59.108 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
3461 | 3569 | 3.576118 | GCAGCTCCATCTCTCCTACAATA | 59.424 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
3482 | 3590 | 2.537401 | GCATCAATTTGAAGCTCTGGC | 58.463 | 47.619 | 17.03 | 3.98 | 38.01 | 4.85 |
3580 | 3688 | 7.121168 | CCAAGTTAATACCAGAATCAGCTTTGA | 59.879 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
3600 | 3708 | 3.181451 | TGACTCTCTGATGCAACCAAGTT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
3631 | 3739 | 7.639113 | ACTTCCATTTTAGGATCGCATTTAA | 57.361 | 32.000 | 0.00 | 0.00 | 37.56 | 1.52 |
3638 | 3746 | 6.816640 | TCTTGTGTACTTCCATTTTAGGATCG | 59.183 | 38.462 | 0.00 | 0.00 | 37.56 | 3.69 |
3853 | 3961 | 3.369756 | TCGCTGTCCATAAATGTTCGAAC | 59.630 | 43.478 | 21.42 | 21.42 | 0.00 | 3.95 |
3911 | 4019 | 6.128063 | CCTTTTTCAAAATGGCAGTTTGTGAA | 60.128 | 34.615 | 31.65 | 25.01 | 37.28 | 3.18 |
3917 | 4025 | 4.502105 | ACCCTTTTTCAAAATGGCAGTT | 57.498 | 36.364 | 8.96 | 0.00 | 37.23 | 3.16 |
3980 | 4088 | 7.870445 | GGAATAGTTTGAGGCACATTACAAAAA | 59.130 | 33.333 | 0.00 | 0.00 | 34.76 | 1.94 |
3992 | 4100 | 5.289083 | AGATCTGAGGAATAGTTTGAGGC | 57.711 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
4031 | 4139 | 7.883311 | CAGTAACTTCCCATGTATATTTAGGGG | 59.117 | 40.741 | 0.00 | 3.02 | 40.02 | 4.79 |
4032 | 4140 | 8.656806 | TCAGTAACTTCCCATGTATATTTAGGG | 58.343 | 37.037 | 0.00 | 0.00 | 40.98 | 3.53 |
4104 | 4212 | 6.379417 | TGCACATGGAAATATTCACCACAATA | 59.621 | 34.615 | 13.97 | 2.01 | 36.49 | 1.90 |
4117 | 4225 | 3.395639 | CAACTTTGCTGCACATGGAAAT | 58.604 | 40.909 | 0.00 | 0.00 | 0.00 | 2.17 |
4147 | 4255 | 6.885735 | AGTTGCAATGAAACAGTAAAACAC | 57.114 | 33.333 | 6.89 | 0.00 | 0.00 | 3.32 |
4346 | 4494 | 8.708742 | TCTATTTGAAATTTCAGACACTGTACG | 58.291 | 33.333 | 19.64 | 3.80 | 38.61 | 3.67 |
4352 | 4500 | 5.795441 | GGCGTCTATTTGAAATTTCAGACAC | 59.205 | 40.000 | 25.61 | 19.92 | 38.61 | 3.67 |
4354 | 4502 | 5.106317 | TGGGCGTCTATTTGAAATTTCAGAC | 60.106 | 40.000 | 19.64 | 20.07 | 38.61 | 3.51 |
4363 | 4511 | 6.576662 | TTTGTTTATGGGCGTCTATTTGAA | 57.423 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
4373 | 4521 | 2.270047 | CTTGCCATTTGTTTATGGGCG | 58.730 | 47.619 | 4.93 | 0.00 | 44.35 | 6.13 |
4374 | 4522 | 3.002102 | CACTTGCCATTTGTTTATGGGC | 58.998 | 45.455 | 4.93 | 0.00 | 44.35 | 5.36 |
4382 | 4530 | 0.752054 | CACCACCACTTGCCATTTGT | 59.248 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4383 | 4531 | 0.600782 | GCACCACCACTTGCCATTTG | 60.601 | 55.000 | 0.00 | 0.00 | 32.21 | 2.32 |
4384 | 4532 | 0.760189 | AGCACCACCACTTGCCATTT | 60.760 | 50.000 | 0.00 | 0.00 | 39.75 | 2.32 |
4385 | 4533 | 0.112218 | TAGCACCACCACTTGCCATT | 59.888 | 50.000 | 0.00 | 0.00 | 39.75 | 3.16 |
4386 | 4534 | 0.112218 | TTAGCACCACCACTTGCCAT | 59.888 | 50.000 | 0.00 | 0.00 | 39.75 | 4.40 |
4387 | 4535 | 0.106469 | TTTAGCACCACCACTTGCCA | 60.106 | 50.000 | 0.00 | 0.00 | 39.75 | 4.92 |
4388 | 4536 | 0.598065 | CTTTAGCACCACCACTTGCC | 59.402 | 55.000 | 0.00 | 0.00 | 39.75 | 4.52 |
4389 | 4537 | 1.318576 | ACTTTAGCACCACCACTTGC | 58.681 | 50.000 | 0.00 | 0.00 | 39.16 | 4.01 |
4390 | 4538 | 4.819630 | TCTAAACTTTAGCACCACCACTTG | 59.180 | 41.667 | 3.91 | 0.00 | 0.00 | 3.16 |
4391 | 4539 | 5.043737 | TCTAAACTTTAGCACCACCACTT | 57.956 | 39.130 | 3.91 | 0.00 | 0.00 | 3.16 |
4392 | 4540 | 4.505039 | CCTCTAAACTTTAGCACCACCACT | 60.505 | 45.833 | 3.91 | 0.00 | 0.00 | 4.00 |
4393 | 4541 | 3.751698 | CCTCTAAACTTTAGCACCACCAC | 59.248 | 47.826 | 3.91 | 0.00 | 0.00 | 4.16 |
4394 | 4542 | 3.649023 | TCCTCTAAACTTTAGCACCACCA | 59.351 | 43.478 | 3.91 | 0.00 | 0.00 | 4.17 |
4395 | 4543 | 4.281898 | TCCTCTAAACTTTAGCACCACC | 57.718 | 45.455 | 3.91 | 0.00 | 0.00 | 4.61 |
4396 | 4544 | 5.179555 | CACTTCCTCTAAACTTTAGCACCAC | 59.820 | 44.000 | 3.91 | 0.00 | 0.00 | 4.16 |
4397 | 4545 | 5.163237 | ACACTTCCTCTAAACTTTAGCACCA | 60.163 | 40.000 | 3.91 | 0.00 | 0.00 | 4.17 |
4398 | 4546 | 5.306394 | ACACTTCCTCTAAACTTTAGCACC | 58.694 | 41.667 | 3.91 | 0.00 | 0.00 | 5.01 |
4399 | 4547 | 6.862711 | AACACTTCCTCTAAACTTTAGCAC | 57.137 | 37.500 | 3.91 | 0.00 | 0.00 | 4.40 |
4400 | 4548 | 7.012044 | GTGAAACACTTCCTCTAAACTTTAGCA | 59.988 | 37.037 | 3.91 | 0.00 | 36.32 | 3.49 |
4401 | 4549 | 7.353497 | GTGAAACACTTCCTCTAAACTTTAGC | 58.647 | 38.462 | 3.91 | 0.00 | 36.32 | 3.09 |
4402 | 4550 | 7.497909 | TGGTGAAACACTTCCTCTAAACTTTAG | 59.502 | 37.037 | 2.49 | 2.49 | 39.98 | 1.85 |
4403 | 4551 | 7.281549 | GTGGTGAAACACTTCCTCTAAACTTTA | 59.718 | 37.037 | 0.00 | 0.00 | 39.98 | 1.85 |
4404 | 4552 | 6.095021 | GTGGTGAAACACTTCCTCTAAACTTT | 59.905 | 38.462 | 0.00 | 0.00 | 39.98 | 2.66 |
4405 | 4553 | 5.589050 | GTGGTGAAACACTTCCTCTAAACTT | 59.411 | 40.000 | 0.00 | 0.00 | 39.98 | 2.66 |
4406 | 4554 | 5.123936 | GTGGTGAAACACTTCCTCTAAACT | 58.876 | 41.667 | 0.00 | 0.00 | 39.98 | 2.66 |
4407 | 4555 | 5.419760 | GTGGTGAAACACTTCCTCTAAAC | 57.580 | 43.478 | 0.00 | 0.00 | 39.98 | 2.01 |
4425 | 4573 | 7.750947 | AAGAGAACACCCTATATAAAGTGGT | 57.249 | 36.000 | 13.57 | 8.74 | 34.50 | 4.16 |
4426 | 4574 | 9.462606 | AAAAAGAGAACACCCTATATAAAGTGG | 57.537 | 33.333 | 13.57 | 0.00 | 34.50 | 4.00 |
4456 | 4604 | 8.612619 | GCTGAATAGATTGGAAATTTCTCGTAA | 58.387 | 33.333 | 17.42 | 8.65 | 0.00 | 3.18 |
4457 | 4605 | 7.987458 | AGCTGAATAGATTGGAAATTTCTCGTA | 59.013 | 33.333 | 17.42 | 4.01 | 0.00 | 3.43 |
4458 | 4606 | 6.825721 | AGCTGAATAGATTGGAAATTTCTCGT | 59.174 | 34.615 | 17.42 | 4.09 | 0.00 | 4.18 |
4459 | 4607 | 7.256756 | AGCTGAATAGATTGGAAATTTCTCG | 57.743 | 36.000 | 17.42 | 3.64 | 0.00 | 4.04 |
4467 | 4615 | 9.631257 | TCATGATTAAAGCTGAATAGATTGGAA | 57.369 | 29.630 | 0.00 | 0.00 | 31.86 | 3.53 |
4468 | 4616 | 9.060347 | GTCATGATTAAAGCTGAATAGATTGGA | 57.940 | 33.333 | 0.00 | 0.00 | 31.86 | 3.53 |
4469 | 4617 | 8.843262 | TGTCATGATTAAAGCTGAATAGATTGG | 58.157 | 33.333 | 0.00 | 0.00 | 31.86 | 3.16 |
4470 | 4618 | 9.880064 | CTGTCATGATTAAAGCTGAATAGATTG | 57.120 | 33.333 | 0.00 | 0.00 | 31.86 | 2.67 |
4471 | 4619 | 9.624373 | ACTGTCATGATTAAAGCTGAATAGATT | 57.376 | 29.630 | 0.00 | 0.00 | 33.08 | 2.40 |
4473 | 4621 | 9.534565 | GTACTGTCATGATTAAAGCTGAATAGA | 57.465 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
4474 | 4622 | 9.317936 | TGTACTGTCATGATTAAAGCTGAATAG | 57.682 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
4475 | 4623 | 9.665719 | TTGTACTGTCATGATTAAAGCTGAATA | 57.334 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
4476 | 4624 | 8.454106 | GTTGTACTGTCATGATTAAAGCTGAAT | 58.546 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
4477 | 4625 | 7.443879 | TGTTGTACTGTCATGATTAAAGCTGAA | 59.556 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
4478 | 4626 | 6.934083 | TGTTGTACTGTCATGATTAAAGCTGA | 59.066 | 34.615 | 0.00 | 0.00 | 0.00 | 4.26 |
4479 | 4627 | 7.132694 | TGTTGTACTGTCATGATTAAAGCTG | 57.867 | 36.000 | 0.00 | 0.00 | 0.00 | 4.24 |
4480 | 4628 | 7.744087 | TTGTTGTACTGTCATGATTAAAGCT | 57.256 | 32.000 | 0.00 | 0.00 | 0.00 | 3.74 |
4481 | 4629 | 7.860373 | TGTTTGTTGTACTGTCATGATTAAAGC | 59.140 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
4482 | 4630 | 9.169468 | GTGTTTGTTGTACTGTCATGATTAAAG | 57.831 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
4483 | 4631 | 8.132362 | GGTGTTTGTTGTACTGTCATGATTAAA | 58.868 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
4484 | 4632 | 7.283354 | TGGTGTTTGTTGTACTGTCATGATTAA | 59.717 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
4485 | 4633 | 6.768381 | TGGTGTTTGTTGTACTGTCATGATTA | 59.232 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
4486 | 4634 | 5.592282 | TGGTGTTTGTTGTACTGTCATGATT | 59.408 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4487 | 4635 | 5.129634 | TGGTGTTTGTTGTACTGTCATGAT | 58.870 | 37.500 | 0.00 | 0.00 | 0.00 | 2.45 |
4488 | 4636 | 4.518249 | TGGTGTTTGTTGTACTGTCATGA | 58.482 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
4489 | 4637 | 4.574421 | TCTGGTGTTTGTTGTACTGTCATG | 59.426 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
4490 | 4638 | 4.776349 | TCTGGTGTTTGTTGTACTGTCAT | 58.224 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
4491 | 4639 | 4.209307 | TCTGGTGTTTGTTGTACTGTCA | 57.791 | 40.909 | 0.00 | 0.00 | 0.00 | 3.58 |
4492 | 4640 | 5.554822 | TTTCTGGTGTTTGTTGTACTGTC | 57.445 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
4493 | 4641 | 7.633193 | TTATTTCTGGTGTTTGTTGTACTGT | 57.367 | 32.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4519 | 4667 | 8.798402 | TGGTTTACGAATCTGGATGTAATTTTT | 58.202 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
4520 | 4668 | 8.343168 | TGGTTTACGAATCTGGATGTAATTTT | 57.657 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
4521 | 4669 | 7.931578 | TGGTTTACGAATCTGGATGTAATTT | 57.068 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4522 | 4670 | 7.993183 | AGATGGTTTACGAATCTGGATGTAATT | 59.007 | 33.333 | 0.00 | 0.00 | 29.52 | 1.40 |
4523 | 4671 | 7.509546 | AGATGGTTTACGAATCTGGATGTAAT | 58.490 | 34.615 | 0.00 | 0.00 | 29.52 | 1.89 |
4524 | 4672 | 6.884832 | AGATGGTTTACGAATCTGGATGTAA | 58.115 | 36.000 | 0.00 | 0.00 | 29.52 | 2.41 |
4525 | 4673 | 6.479972 | AGATGGTTTACGAATCTGGATGTA | 57.520 | 37.500 | 0.00 | 0.00 | 29.52 | 2.29 |
4526 | 4674 | 5.359194 | AGATGGTTTACGAATCTGGATGT | 57.641 | 39.130 | 0.00 | 0.00 | 29.52 | 3.06 |
4527 | 4675 | 5.406780 | GCTAGATGGTTTACGAATCTGGATG | 59.593 | 44.000 | 0.00 | 1.31 | 32.35 | 3.51 |
4528 | 4676 | 5.542779 | GCTAGATGGTTTACGAATCTGGAT | 58.457 | 41.667 | 0.00 | 0.00 | 32.35 | 3.41 |
4529 | 4677 | 4.499188 | CGCTAGATGGTTTACGAATCTGGA | 60.499 | 45.833 | 0.00 | 0.00 | 32.35 | 3.86 |
4530 | 4678 | 3.736252 | CGCTAGATGGTTTACGAATCTGG | 59.264 | 47.826 | 0.00 | 5.56 | 32.92 | 3.86 |
4531 | 4679 | 4.607955 | TCGCTAGATGGTTTACGAATCTG | 58.392 | 43.478 | 0.00 | 1.20 | 32.92 | 2.90 |
4532 | 4680 | 4.913335 | TCGCTAGATGGTTTACGAATCT | 57.087 | 40.909 | 0.00 | 0.00 | 34.99 | 2.40 |
4545 | 4693 | 3.954904 | AGTGGTTGTAGTCATCGCTAGAT | 59.045 | 43.478 | 0.00 | 0.00 | 37.65 | 1.98 |
4546 | 4694 | 3.128764 | CAGTGGTTGTAGTCATCGCTAGA | 59.871 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
4547 | 4695 | 3.128764 | TCAGTGGTTGTAGTCATCGCTAG | 59.871 | 47.826 | 0.00 | 0.00 | 0.00 | 3.42 |
4548 | 4696 | 3.086282 | TCAGTGGTTGTAGTCATCGCTA | 58.914 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
4549 | 4697 | 1.893137 | TCAGTGGTTGTAGTCATCGCT | 59.107 | 47.619 | 0.00 | 0.00 | 0.00 | 4.93 |
4550 | 4698 | 2.363788 | TCAGTGGTTGTAGTCATCGC | 57.636 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
4551 | 4699 | 2.668457 | GCTTCAGTGGTTGTAGTCATCG | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.84 |
4552 | 4700 | 2.668457 | CGCTTCAGTGGTTGTAGTCATC | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
4553 | 4701 | 2.299013 | TCGCTTCAGTGGTTGTAGTCAT | 59.701 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
4554 | 4702 | 1.684450 | TCGCTTCAGTGGTTGTAGTCA | 59.316 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
4555 | 4703 | 2.433868 | TCGCTTCAGTGGTTGTAGTC | 57.566 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4556 | 4704 | 2.902705 | TTCGCTTCAGTGGTTGTAGT | 57.097 | 45.000 | 0.00 | 0.00 | 0.00 | 2.73 |
4557 | 4705 | 2.345641 | CGATTCGCTTCAGTGGTTGTAG | 59.654 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4558 | 4706 | 2.029739 | TCGATTCGCTTCAGTGGTTGTA | 60.030 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
4559 | 4707 | 1.148310 | CGATTCGCTTCAGTGGTTGT | 58.852 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4560 | 4708 | 1.428448 | TCGATTCGCTTCAGTGGTTG | 58.572 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
4561 | 4709 | 2.069273 | CTTCGATTCGCTTCAGTGGTT | 58.931 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
4562 | 4710 | 1.673033 | CCTTCGATTCGCTTCAGTGGT | 60.673 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
4563 | 4711 | 1.002366 | CCTTCGATTCGCTTCAGTGG | 58.998 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4564 | 4712 | 1.923204 | CTCCTTCGATTCGCTTCAGTG | 59.077 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
4565 | 4713 | 1.737363 | GCTCCTTCGATTCGCTTCAGT | 60.737 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
4566 | 4714 | 0.926846 | GCTCCTTCGATTCGCTTCAG | 59.073 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4567 | 4715 | 0.802222 | CGCTCCTTCGATTCGCTTCA | 60.802 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4568 | 4716 | 1.920762 | CGCTCCTTCGATTCGCTTC | 59.079 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
4569 | 4717 | 2.167861 | GCGCTCCTTCGATTCGCTT | 61.168 | 57.895 | 0.00 | 0.00 | 42.19 | 4.68 |
4570 | 4718 | 2.583593 | GCGCTCCTTCGATTCGCT | 60.584 | 61.111 | 0.00 | 0.00 | 42.19 | 4.93 |
4571 | 4719 | 3.631127 | GGCGCTCCTTCGATTCGC | 61.631 | 66.667 | 7.64 | 8.17 | 44.39 | 4.70 |
4572 | 4720 | 3.323136 | CGGCGCTCCTTCGATTCG | 61.323 | 66.667 | 7.64 | 0.00 | 0.00 | 3.34 |
4573 | 4721 | 3.631127 | GCGGCGCTCCTTCGATTC | 61.631 | 66.667 | 26.86 | 0.00 | 0.00 | 2.52 |
4591 | 4739 | 3.917760 | GAGGGAGGGACGATGGCG | 61.918 | 72.222 | 0.00 | 0.00 | 44.79 | 5.69 |
4592 | 4740 | 3.917760 | CGAGGGAGGGACGATGGC | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 4.40 |
4593 | 4741 | 3.917760 | GCGAGGGAGGGACGATGG | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
4594 | 4742 | 3.144120 | CTGCGAGGGAGGGACGATG | 62.144 | 68.421 | 0.00 | 0.00 | 0.00 | 3.84 |
4595 | 4743 | 2.835431 | CTGCGAGGGAGGGACGAT | 60.835 | 66.667 | 0.00 | 0.00 | 0.00 | 3.73 |
4598 | 4746 | 3.151022 | CTCCTGCGAGGGAGGGAC | 61.151 | 72.222 | 14.01 | 0.00 | 46.63 | 4.46 |
4611 | 4759 | 2.464403 | AAGTTGTGCCAGGGCTCCT | 61.464 | 57.895 | 12.19 | 0.00 | 42.51 | 3.69 |
4612 | 4760 | 2.116125 | AAGTTGTGCCAGGGCTCC | 59.884 | 61.111 | 12.19 | 2.86 | 42.51 | 4.70 |
4613 | 4761 | 0.250727 | TACAAGTTGTGCCAGGGCTC | 60.251 | 55.000 | 18.90 | 8.68 | 42.51 | 4.70 |
4614 | 4762 | 0.250901 | CTACAAGTTGTGCCAGGGCT | 60.251 | 55.000 | 18.90 | 0.00 | 42.51 | 5.19 |
4615 | 4763 | 0.250727 | TCTACAAGTTGTGCCAGGGC | 60.251 | 55.000 | 18.90 | 2.62 | 42.35 | 5.19 |
4616 | 4764 | 1.202758 | TGTCTACAAGTTGTGCCAGGG | 60.203 | 52.381 | 18.90 | 2.41 | 0.00 | 4.45 |
4617 | 4765 | 2.146342 | CTGTCTACAAGTTGTGCCAGG | 58.854 | 52.381 | 18.90 | 2.68 | 0.00 | 4.45 |
4618 | 4766 | 2.838736 | ACTGTCTACAAGTTGTGCCAG | 58.161 | 47.619 | 18.90 | 20.01 | 31.47 | 4.85 |
4619 | 4767 | 2.942376 | CAACTGTCTACAAGTTGTGCCA | 59.058 | 45.455 | 18.90 | 10.61 | 38.36 | 4.92 |
4620 | 4768 | 2.290641 | CCAACTGTCTACAAGTTGTGCC | 59.709 | 50.000 | 18.90 | 6.61 | 40.69 | 5.01 |
4621 | 4769 | 3.202906 | TCCAACTGTCTACAAGTTGTGC | 58.797 | 45.455 | 18.90 | 9.07 | 40.69 | 4.57 |
4622 | 4770 | 4.876107 | ACTTCCAACTGTCTACAAGTTGTG | 59.124 | 41.667 | 18.90 | 8.69 | 40.69 | 3.33 |
4623 | 4771 | 5.099042 | ACTTCCAACTGTCTACAAGTTGT | 57.901 | 39.130 | 14.05 | 14.05 | 40.69 | 3.32 |
4624 | 4772 | 4.209288 | CGACTTCCAACTGTCTACAAGTTG | 59.791 | 45.833 | 0.00 | 0.00 | 41.61 | 3.16 |
4625 | 4773 | 4.142004 | ACGACTTCCAACTGTCTACAAGTT | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
4626 | 4774 | 3.383825 | ACGACTTCCAACTGTCTACAAGT | 59.616 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
4627 | 4775 | 3.978687 | ACGACTTCCAACTGTCTACAAG | 58.021 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
4628 | 4776 | 3.549423 | CGACGACTTCCAACTGTCTACAA | 60.549 | 47.826 | 0.00 | 0.00 | 0.00 | 2.41 |
4629 | 4777 | 2.031420 | CGACGACTTCCAACTGTCTACA | 60.031 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4630 | 4778 | 2.031333 | ACGACGACTTCCAACTGTCTAC | 60.031 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4631 | 4779 | 2.031420 | CACGACGACTTCCAACTGTCTA | 60.031 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4632 | 4780 | 1.030457 | ACGACGACTTCCAACTGTCT | 58.970 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4633 | 4781 | 1.129326 | CACGACGACTTCCAACTGTC | 58.871 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4634 | 4782 | 0.458669 | ACACGACGACTTCCAACTGT | 59.541 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4635 | 4783 | 1.567504 | AACACGACGACTTCCAACTG | 58.432 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4636 | 4784 | 3.378339 | CTTAACACGACGACTTCCAACT | 58.622 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
4637 | 4785 | 2.473984 | CCTTAACACGACGACTTCCAAC | 59.526 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
4638 | 4786 | 2.746269 | CCTTAACACGACGACTTCCAA | 58.254 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
4639 | 4787 | 1.603678 | GCCTTAACACGACGACTTCCA | 60.604 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
4640 | 4788 | 1.066136 | GCCTTAACACGACGACTTCC | 58.934 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4641 | 4789 | 1.066136 | GGCCTTAACACGACGACTTC | 58.934 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4642 | 4790 | 0.677842 | AGGCCTTAACACGACGACTT | 59.322 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4643 | 4791 | 0.243095 | GAGGCCTTAACACGACGACT | 59.757 | 55.000 | 6.77 | 0.00 | 0.00 | 4.18 |
4644 | 4792 | 0.038892 | TGAGGCCTTAACACGACGAC | 60.039 | 55.000 | 6.77 | 0.00 | 0.00 | 4.34 |
4645 | 4793 | 0.892755 | ATGAGGCCTTAACACGACGA | 59.107 | 50.000 | 6.77 | 0.00 | 0.00 | 4.20 |
4646 | 4794 | 2.460918 | CTATGAGGCCTTAACACGACG | 58.539 | 52.381 | 6.77 | 0.00 | 0.00 | 5.12 |
4647 | 4795 | 2.429610 | TCCTATGAGGCCTTAACACGAC | 59.570 | 50.000 | 6.77 | 0.00 | 34.61 | 4.34 |
4648 | 4796 | 2.429610 | GTCCTATGAGGCCTTAACACGA | 59.570 | 50.000 | 6.77 | 0.00 | 34.61 | 4.35 |
4649 | 4797 | 2.483188 | GGTCCTATGAGGCCTTAACACG | 60.483 | 54.545 | 6.77 | 0.00 | 34.61 | 4.49 |
4650 | 4798 | 2.504175 | TGGTCCTATGAGGCCTTAACAC | 59.496 | 50.000 | 6.77 | 0.00 | 34.61 | 3.32 |
4651 | 4799 | 2.840511 | TGGTCCTATGAGGCCTTAACA | 58.159 | 47.619 | 6.77 | 0.00 | 34.61 | 2.41 |
4652 | 4800 | 3.542648 | GTTGGTCCTATGAGGCCTTAAC | 58.457 | 50.000 | 6.77 | 0.00 | 34.61 | 2.01 |
4653 | 4801 | 2.169769 | CGTTGGTCCTATGAGGCCTTAA | 59.830 | 50.000 | 6.77 | 0.00 | 34.61 | 1.85 |
4654 | 4802 | 1.760613 | CGTTGGTCCTATGAGGCCTTA | 59.239 | 52.381 | 6.77 | 1.66 | 34.61 | 2.69 |
4655 | 4803 | 0.541863 | CGTTGGTCCTATGAGGCCTT | 59.458 | 55.000 | 6.77 | 0.00 | 34.61 | 4.35 |
4656 | 4804 | 1.972660 | GCGTTGGTCCTATGAGGCCT | 61.973 | 60.000 | 3.86 | 3.86 | 34.61 | 5.19 |
4657 | 4805 | 1.523938 | GCGTTGGTCCTATGAGGCC | 60.524 | 63.158 | 0.00 | 0.00 | 34.61 | 5.19 |
4658 | 4806 | 1.090052 | GTGCGTTGGTCCTATGAGGC | 61.090 | 60.000 | 0.00 | 0.00 | 34.61 | 4.70 |
4659 | 4807 | 0.462047 | GGTGCGTTGGTCCTATGAGG | 60.462 | 60.000 | 0.00 | 0.00 | 36.46 | 3.86 |
4660 | 4808 | 0.249120 | TGGTGCGTTGGTCCTATGAG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
4661 | 4809 | 0.249120 | CTGGTGCGTTGGTCCTATGA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 2.15 |
4662 | 4810 | 0.249120 | TCTGGTGCGTTGGTCCTATG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 2.23 |
4663 | 4811 | 0.981183 | TTCTGGTGCGTTGGTCCTAT | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
4664 | 4812 | 0.320374 | CTTCTGGTGCGTTGGTCCTA | 59.680 | 55.000 | 0.00 | 0.00 | 0.00 | 2.94 |
4665 | 4813 | 1.071471 | CTTCTGGTGCGTTGGTCCT | 59.929 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
4666 | 4814 | 0.951040 | CTCTTCTGGTGCGTTGGTCC | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
4667 | 4815 | 1.569479 | GCTCTTCTGGTGCGTTGGTC | 61.569 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4668 | 4816 | 1.598130 | GCTCTTCTGGTGCGTTGGT | 60.598 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
4669 | 4817 | 1.165907 | TTGCTCTTCTGGTGCGTTGG | 61.166 | 55.000 | 0.00 | 0.00 | 37.26 | 3.77 |
4670 | 4818 | 0.040958 | GTTGCTCTTCTGGTGCGTTG | 60.041 | 55.000 | 0.00 | 0.00 | 37.26 | 4.10 |
4671 | 4819 | 1.166531 | GGTTGCTCTTCTGGTGCGTT | 61.167 | 55.000 | 0.00 | 0.00 | 37.26 | 4.84 |
4672 | 4820 | 1.598130 | GGTTGCTCTTCTGGTGCGT | 60.598 | 57.895 | 0.00 | 0.00 | 37.26 | 5.24 |
4673 | 4821 | 2.671177 | CGGTTGCTCTTCTGGTGCG | 61.671 | 63.158 | 0.00 | 0.00 | 37.26 | 5.34 |
4674 | 4822 | 2.970974 | GCGGTTGCTCTTCTGGTGC | 61.971 | 63.158 | 0.00 | 0.00 | 38.39 | 5.01 |
4675 | 4823 | 2.328099 | GGCGGTTGCTCTTCTGGTG | 61.328 | 63.158 | 0.00 | 0.00 | 42.25 | 4.17 |
4676 | 4824 | 2.032681 | GGCGGTTGCTCTTCTGGT | 59.967 | 61.111 | 0.00 | 0.00 | 42.25 | 4.00 |
4677 | 4825 | 3.121030 | CGGCGGTTGCTCTTCTGG | 61.121 | 66.667 | 0.00 | 0.00 | 42.25 | 3.86 |
4678 | 4826 | 3.793144 | GCGGCGGTTGCTCTTCTG | 61.793 | 66.667 | 9.78 | 0.00 | 42.25 | 3.02 |
4691 | 4839 | 3.479269 | CTTGTCTTCGTCGGCGGC | 61.479 | 66.667 | 10.62 | 3.25 | 38.89 | 6.53 |
4692 | 4840 | 1.219522 | AAACTTGTCTTCGTCGGCGG | 61.220 | 55.000 | 10.62 | 0.00 | 38.89 | 6.13 |
4693 | 4841 | 1.385743 | CTAAACTTGTCTTCGTCGGCG | 59.614 | 52.381 | 1.15 | 1.15 | 39.92 | 6.46 |
4694 | 4842 | 2.669364 | TCTAAACTTGTCTTCGTCGGC | 58.331 | 47.619 | 0.00 | 0.00 | 0.00 | 5.54 |
4695 | 4843 | 3.542704 | CGATCTAAACTTGTCTTCGTCGG | 59.457 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
4696 | 4844 | 4.400845 | TCGATCTAAACTTGTCTTCGTCG | 58.599 | 43.478 | 0.00 | 0.00 | 0.00 | 5.12 |
4697 | 4845 | 6.686130 | TTTCGATCTAAACTTGTCTTCGTC | 57.314 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
4698 | 4846 | 6.866770 | TCATTTCGATCTAAACTTGTCTTCGT | 59.133 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
4699 | 4847 | 7.278211 | TCATTTCGATCTAAACTTGTCTTCG | 57.722 | 36.000 | 0.00 | 0.00 | 0.00 | 3.79 |
4702 | 4850 | 7.824289 | TTGGATCATTTCGATCTAAACTTGTCT | 59.176 | 33.333 | 0.00 | 0.00 | 45.53 | 3.41 |
4703 | 4851 | 7.974675 | TTGGATCATTTCGATCTAAACTTGTC | 58.025 | 34.615 | 0.00 | 0.00 | 45.53 | 3.18 |
4704 | 4852 | 7.921786 | TTGGATCATTTCGATCTAAACTTGT | 57.078 | 32.000 | 0.00 | 0.00 | 45.53 | 3.16 |
4714 | 4862 | 3.054434 | TGTGGAGGTTGGATCATTTCGAT | 60.054 | 43.478 | 0.00 | 0.00 | 36.91 | 3.59 |
4715 | 4863 | 2.304470 | TGTGGAGGTTGGATCATTTCGA | 59.696 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
4716 | 4864 | 2.420022 | GTGTGGAGGTTGGATCATTTCG | 59.580 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4717 | 4865 | 3.690460 | AGTGTGGAGGTTGGATCATTTC | 58.310 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
4718 | 4866 | 3.814504 | AGTGTGGAGGTTGGATCATTT | 57.185 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
4719 | 4867 | 4.927267 | TTAGTGTGGAGGTTGGATCATT | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
4720 | 4868 | 4.927267 | TTTAGTGTGGAGGTTGGATCAT | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 2.45 |
4721 | 4869 | 4.288366 | TCATTTAGTGTGGAGGTTGGATCA | 59.712 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
4722 | 4870 | 4.843728 | TCATTTAGTGTGGAGGTTGGATC | 58.156 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
4723 | 4871 | 4.927267 | TCATTTAGTGTGGAGGTTGGAT | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
4724 | 4872 | 4.042809 | ACATCATTTAGTGTGGAGGTTGGA | 59.957 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
4725 | 4873 | 4.156556 | CACATCATTTAGTGTGGAGGTTGG | 59.843 | 45.833 | 0.00 | 0.00 | 41.46 | 3.77 |
4726 | 4874 | 5.300969 | CACATCATTTAGTGTGGAGGTTG | 57.699 | 43.478 | 0.00 | 0.00 | 41.46 | 3.77 |
4727 | 4875 | 8.340249 | TTCAACACATCATTTAGTGTGGAGGTT | 61.340 | 37.037 | 9.90 | 0.00 | 46.22 | 3.50 |
4728 | 4876 | 6.915219 | TTCAACACATCATTTAGTGTGGAGGT | 60.915 | 38.462 | 9.90 | 0.00 | 46.22 | 3.85 |
4729 | 4877 | 5.473162 | TTCAACACATCATTTAGTGTGGAGG | 59.527 | 40.000 | 9.90 | 0.26 | 46.22 | 4.30 |
4730 | 4878 | 6.558771 | TTCAACACATCATTTAGTGTGGAG | 57.441 | 37.500 | 9.90 | 2.71 | 46.22 | 3.86 |
4735 | 4883 | 9.903682 | ATTTCTCTTTCAACACATCATTTAGTG | 57.096 | 29.630 | 0.00 | 0.00 | 41.40 | 2.74 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.