Multiple sequence alignment - TraesCS6A01G178900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G178900 chr6A 100.000 3342 0 0 1 3342 201090297 201086956 0.000000e+00 6172.0
1 TraesCS6A01G178900 chr6B 93.283 2367 84 29 177 2514 259088421 259086101 0.000000e+00 3421.0
2 TraesCS6A01G178900 chr6B 88.962 453 22 13 2585 3024 259079126 259078689 4.910000e-148 534.0
3 TraesCS6A01G178900 chr6B 92.655 177 12 1 1 177 477800936 477801111 1.540000e-63 254.0
4 TraesCS6A01G178900 chr6D 94.568 1841 67 13 719 2543 144879107 144877284 0.000000e+00 2815.0
5 TraesCS6A01G178900 chr6D 90.949 453 24 10 2585 3024 144876131 144875683 7.980000e-166 593.0
6 TraesCS6A01G178900 chr6D 90.865 416 15 7 311 726 144894849 144894457 1.360000e-148 536.0
7 TraesCS6A01G178900 chr3D 95.429 175 8 0 1 175 478536658 478536832 2.540000e-71 279.0
8 TraesCS6A01G178900 chr3D 79.661 177 20 8 1 176 391429080 391428919 2.730000e-21 113.0
9 TraesCS6A01G178900 chr2A 94.350 177 10 0 1 177 676982775 676982599 4.250000e-69 272.0
10 TraesCS6A01G178900 chr2A 95.556 45 2 0 133 177 523447508 523447552 4.630000e-09 73.1
11 TraesCS6A01G178900 chr2D 86.667 135 14 3 47 177 491813057 491813191 2.690000e-31 147.0
12 TraesCS6A01G178900 chr2D 92.982 57 4 0 120 176 495787784 495787840 2.140000e-12 84.2
13 TraesCS6A01G178900 chr2B 84.810 79 11 1 5 82 111656760 111656682 9.940000e-11 78.7
14 TraesCS6A01G178900 chr5B 95.652 46 2 0 132 177 711827161 711827206 1.290000e-09 75.0
15 TraesCS6A01G178900 chr1B 88.889 63 4 3 119 179 596886237 596886298 1.290000e-09 75.0
16 TraesCS6A01G178900 chr1B 86.885 61 6 1 119 179 47514053 47513995 2.150000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G178900 chr6A 201086956 201090297 3341 True 6172 6172 100.0000 1 3342 1 chr6A.!!$R1 3341
1 TraesCS6A01G178900 chr6B 259086101 259088421 2320 True 3421 3421 93.2830 177 2514 1 chr6B.!!$R2 2337
2 TraesCS6A01G178900 chr6D 144875683 144879107 3424 True 1704 2815 92.7585 719 3024 2 chr6D.!!$R2 2305

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
101 102 0.196118 TCTTTCCCACTTCCCCCTCT 59.804 55.0 0.00 0.00 0.0 3.69 F
103 104 0.196118 TTTCCCACTTCCCCCTCTCT 59.804 55.0 0.00 0.00 0.0 3.10 F
679 695 0.879400 CTGCACTGGAGATCGCCATC 60.879 60.0 19.23 11.36 37.3 3.51 F
808 824 0.916086 TGGGGACGGAGCAATTACAT 59.084 50.0 0.00 0.00 0.0 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1731 1767 0.454620 CGTTCTTCTCCTCGTCGTGG 60.455 60.000 7.02 7.02 0.00 4.94 R
1963 1999 1.684734 ACGCCCCCTCGTTGACTAT 60.685 57.895 0.00 0.00 40.07 2.12 R
2201 2237 0.178990 GTTGGTTCCAGCCTCCTTGT 60.179 55.000 0.00 0.00 0.00 3.16 R
2440 2477 2.361104 ATCCCATGGCAACGCGTT 60.361 55.556 20.79 20.79 42.51 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.845811 ACGTGGTCTAGGTGCTCT 57.154 55.556 0.00 0.00 0.00 4.09
18 19 2.268022 ACGTGGTCTAGGTGCTCTG 58.732 57.895 0.00 0.00 0.00 3.35
19 20 1.251527 ACGTGGTCTAGGTGCTCTGG 61.252 60.000 0.00 0.00 0.00 3.86
20 21 1.901085 GTGGTCTAGGTGCTCTGGG 59.099 63.158 0.00 0.00 0.00 4.45
21 22 0.905337 GTGGTCTAGGTGCTCTGGGT 60.905 60.000 0.00 0.00 0.00 4.51
22 23 0.614979 TGGTCTAGGTGCTCTGGGTC 60.615 60.000 0.00 0.00 0.00 4.46
23 24 0.324830 GGTCTAGGTGCTCTGGGTCT 60.325 60.000 0.00 0.00 0.00 3.85
24 25 1.107945 GTCTAGGTGCTCTGGGTCTC 58.892 60.000 0.00 0.00 0.00 3.36
25 26 0.394488 TCTAGGTGCTCTGGGTCTCG 60.394 60.000 0.00 0.00 0.00 4.04
26 27 0.681564 CTAGGTGCTCTGGGTCTCGT 60.682 60.000 0.00 0.00 0.00 4.18
27 28 0.680280 TAGGTGCTCTGGGTCTCGTC 60.680 60.000 0.00 0.00 0.00 4.20
28 29 1.979693 GGTGCTCTGGGTCTCGTCT 60.980 63.158 0.00 0.00 0.00 4.18
29 30 1.509004 GTGCTCTGGGTCTCGTCTC 59.491 63.158 0.00 0.00 0.00 3.36
30 31 1.679305 TGCTCTGGGTCTCGTCTCC 60.679 63.158 0.00 0.00 0.00 3.71
31 32 1.379309 GCTCTGGGTCTCGTCTCCT 60.379 63.158 0.00 0.00 0.00 3.69
32 33 1.381165 GCTCTGGGTCTCGTCTCCTC 61.381 65.000 0.00 0.00 0.00 3.71
33 34 1.078356 TCTGGGTCTCGTCTCCTCG 60.078 63.158 0.00 0.00 0.00 4.63
34 35 2.750637 TGGGTCTCGTCTCCTCGC 60.751 66.667 0.00 0.00 0.00 5.03
35 36 3.519930 GGGTCTCGTCTCCTCGCC 61.520 72.222 0.00 0.00 0.00 5.54
36 37 2.438795 GGTCTCGTCTCCTCGCCT 60.439 66.667 0.00 0.00 0.00 5.52
37 38 2.047443 GGTCTCGTCTCCTCGCCTT 61.047 63.158 0.00 0.00 0.00 4.35
38 39 1.430228 GTCTCGTCTCCTCGCCTTC 59.570 63.158 0.00 0.00 0.00 3.46
39 40 1.749638 TCTCGTCTCCTCGCCTTCC 60.750 63.158 0.00 0.00 0.00 3.46
40 41 1.751162 CTCGTCTCCTCGCCTTCCT 60.751 63.158 0.00 0.00 0.00 3.36
41 42 1.304217 TCGTCTCCTCGCCTTCCTT 60.304 57.895 0.00 0.00 0.00 3.36
42 43 1.153745 CGTCTCCTCGCCTTCCTTG 60.154 63.158 0.00 0.00 0.00 3.61
43 44 1.219393 GTCTCCTCGCCTTCCTTGG 59.781 63.158 0.00 0.00 0.00 3.61
52 53 3.753787 CCTTCCTTGGCTGGAGTTT 57.246 52.632 0.66 0.00 37.43 2.66
53 54 1.251251 CCTTCCTTGGCTGGAGTTTG 58.749 55.000 0.66 0.00 37.43 2.93
54 55 1.202927 CCTTCCTTGGCTGGAGTTTGA 60.203 52.381 0.66 0.00 37.43 2.69
55 56 2.157738 CTTCCTTGGCTGGAGTTTGAG 58.842 52.381 0.66 0.00 37.43 3.02
56 57 0.250901 TCCTTGGCTGGAGTTTGAGC 60.251 55.000 0.00 0.00 34.23 4.26
57 58 0.251077 CCTTGGCTGGAGTTTGAGCT 60.251 55.000 0.00 0.00 35.42 4.09
58 59 1.003580 CCTTGGCTGGAGTTTGAGCTA 59.996 52.381 0.00 0.00 35.42 3.32
59 60 2.354259 CTTGGCTGGAGTTTGAGCTAG 58.646 52.381 0.00 0.00 35.42 3.42
60 61 0.615331 TGGCTGGAGTTTGAGCTAGG 59.385 55.000 0.00 0.00 35.42 3.02
61 62 0.905357 GGCTGGAGTTTGAGCTAGGA 59.095 55.000 0.00 0.00 35.42 2.94
62 63 1.279271 GGCTGGAGTTTGAGCTAGGAA 59.721 52.381 0.00 0.00 35.42 3.36
63 64 2.290323 GGCTGGAGTTTGAGCTAGGAAA 60.290 50.000 0.00 0.00 35.42 3.13
64 65 3.006247 GCTGGAGTTTGAGCTAGGAAAG 58.994 50.000 0.00 0.00 32.12 2.62
65 66 3.307059 GCTGGAGTTTGAGCTAGGAAAGA 60.307 47.826 0.00 0.00 32.12 2.52
66 67 4.625083 GCTGGAGTTTGAGCTAGGAAAGAT 60.625 45.833 0.00 0.00 32.12 2.40
67 68 5.495640 CTGGAGTTTGAGCTAGGAAAGATT 58.504 41.667 0.00 0.00 0.00 2.40
68 69 6.620877 TGGAGTTTGAGCTAGGAAAGATTA 57.379 37.500 0.00 0.00 0.00 1.75
69 70 7.200434 TGGAGTTTGAGCTAGGAAAGATTAT 57.800 36.000 0.00 0.00 0.00 1.28
70 71 7.050377 TGGAGTTTGAGCTAGGAAAGATTATG 58.950 38.462 0.00 0.00 0.00 1.90
71 72 7.051000 GGAGTTTGAGCTAGGAAAGATTATGT 58.949 38.462 0.00 0.00 0.00 2.29
72 73 7.554476 GGAGTTTGAGCTAGGAAAGATTATGTT 59.446 37.037 0.00 0.00 0.00 2.71
73 74 8.273780 AGTTTGAGCTAGGAAAGATTATGTTG 57.726 34.615 0.00 0.00 0.00 3.33
74 75 7.885399 AGTTTGAGCTAGGAAAGATTATGTTGT 59.115 33.333 0.00 0.00 0.00 3.32
75 76 7.615582 TTGAGCTAGGAAAGATTATGTTGTG 57.384 36.000 0.00 0.00 0.00 3.33
76 77 6.711277 TGAGCTAGGAAAGATTATGTTGTGT 58.289 36.000 0.00 0.00 0.00 3.72
77 78 7.168219 TGAGCTAGGAAAGATTATGTTGTGTT 58.832 34.615 0.00 0.00 0.00 3.32
78 79 7.119699 TGAGCTAGGAAAGATTATGTTGTGTTG 59.880 37.037 0.00 0.00 0.00 3.33
79 80 6.942576 AGCTAGGAAAGATTATGTTGTGTTGT 59.057 34.615 0.00 0.00 0.00 3.32
80 81 8.100791 AGCTAGGAAAGATTATGTTGTGTTGTA 58.899 33.333 0.00 0.00 0.00 2.41
81 82 8.893727 GCTAGGAAAGATTATGTTGTGTTGTAT 58.106 33.333 0.00 0.00 0.00 2.29
84 85 9.520515 AGGAAAGATTATGTTGTGTTGTATTCT 57.479 29.630 0.00 0.00 0.00 2.40
89 90 8.739972 AGATTATGTTGTGTTGTATTCTTTCCC 58.260 33.333 0.00 0.00 0.00 3.97
90 91 7.825331 TTATGTTGTGTTGTATTCTTTCCCA 57.175 32.000 0.00 0.00 0.00 4.37
91 92 5.508200 TGTTGTGTTGTATTCTTTCCCAC 57.492 39.130 0.00 0.00 0.00 4.61
92 93 5.197451 TGTTGTGTTGTATTCTTTCCCACT 58.803 37.500 0.00 0.00 0.00 4.00
93 94 5.654650 TGTTGTGTTGTATTCTTTCCCACTT 59.345 36.000 0.00 0.00 0.00 3.16
94 95 6.183360 TGTTGTGTTGTATTCTTTCCCACTTC 60.183 38.462 0.00 0.00 0.00 3.01
95 96 4.825085 TGTGTTGTATTCTTTCCCACTTCC 59.175 41.667 0.00 0.00 0.00 3.46
96 97 4.217767 GTGTTGTATTCTTTCCCACTTCCC 59.782 45.833 0.00 0.00 0.00 3.97
97 98 3.732048 TGTATTCTTTCCCACTTCCCC 57.268 47.619 0.00 0.00 0.00 4.81
98 99 2.310647 TGTATTCTTTCCCACTTCCCCC 59.689 50.000 0.00 0.00 0.00 5.40
99 100 1.773541 ATTCTTTCCCACTTCCCCCT 58.226 50.000 0.00 0.00 0.00 4.79
100 101 1.073098 TTCTTTCCCACTTCCCCCTC 58.927 55.000 0.00 0.00 0.00 4.30
101 102 0.196118 TCTTTCCCACTTCCCCCTCT 59.804 55.000 0.00 0.00 0.00 3.69
102 103 0.621082 CTTTCCCACTTCCCCCTCTC 59.379 60.000 0.00 0.00 0.00 3.20
103 104 0.196118 TTTCCCACTTCCCCCTCTCT 59.804 55.000 0.00 0.00 0.00 3.10
104 105 0.196118 TTCCCACTTCCCCCTCTCTT 59.804 55.000 0.00 0.00 0.00 2.85
105 106 1.098589 TCCCACTTCCCCCTCTCTTA 58.901 55.000 0.00 0.00 0.00 2.10
106 107 1.657162 TCCCACTTCCCCCTCTCTTAT 59.343 52.381 0.00 0.00 0.00 1.73
107 108 2.050918 CCCACTTCCCCCTCTCTTATC 58.949 57.143 0.00 0.00 0.00 1.75
108 109 2.360854 CCCACTTCCCCCTCTCTTATCT 60.361 54.545 0.00 0.00 0.00 1.98
109 110 3.116707 CCCACTTCCCCCTCTCTTATCTA 60.117 52.174 0.00 0.00 0.00 1.98
110 111 4.451460 CCCACTTCCCCCTCTCTTATCTAT 60.451 50.000 0.00 0.00 0.00 1.98
111 112 4.530161 CCACTTCCCCCTCTCTTATCTATG 59.470 50.000 0.00 0.00 0.00 2.23
112 113 5.151454 CACTTCCCCCTCTCTTATCTATGT 58.849 45.833 0.00 0.00 0.00 2.29
113 114 5.604650 CACTTCCCCCTCTCTTATCTATGTT 59.395 44.000 0.00 0.00 0.00 2.71
114 115 6.782988 CACTTCCCCCTCTCTTATCTATGTTA 59.217 42.308 0.00 0.00 0.00 2.41
115 116 6.783482 ACTTCCCCCTCTCTTATCTATGTTAC 59.217 42.308 0.00 0.00 0.00 2.50
116 117 6.547396 TCCCCCTCTCTTATCTATGTTACT 57.453 41.667 0.00 0.00 0.00 2.24
117 118 6.553857 TCCCCCTCTCTTATCTATGTTACTC 58.446 44.000 0.00 0.00 0.00 2.59
118 119 6.335850 TCCCCCTCTCTTATCTATGTTACTCT 59.664 42.308 0.00 0.00 0.00 3.24
119 120 7.013834 CCCCCTCTCTTATCTATGTTACTCTT 58.986 42.308 0.00 0.00 0.00 2.85
120 121 7.039363 CCCCCTCTCTTATCTATGTTACTCTTG 60.039 44.444 0.00 0.00 0.00 3.02
121 122 7.507616 CCCCTCTCTTATCTATGTTACTCTTGT 59.492 40.741 0.00 0.00 0.00 3.16
122 123 8.919145 CCCTCTCTTATCTATGTTACTCTTGTT 58.081 37.037 0.00 0.00 0.00 2.83
123 124 9.959749 CCTCTCTTATCTATGTTACTCTTGTTC 57.040 37.037 0.00 0.00 0.00 3.18
128 129 9.959749 CTTATCTATGTTACTCTTGTTCTCTCC 57.040 37.037 0.00 0.00 0.00 3.71
129 130 9.702253 TTATCTATGTTACTCTTGTTCTCTCCT 57.298 33.333 0.00 0.00 0.00 3.69
131 132 8.508883 TCTATGTTACTCTTGTTCTCTCCTAC 57.491 38.462 0.00 0.00 0.00 3.18
132 133 5.979288 TGTTACTCTTGTTCTCTCCTACC 57.021 43.478 0.00 0.00 0.00 3.18
133 134 5.642165 TGTTACTCTTGTTCTCTCCTACCT 58.358 41.667 0.00 0.00 0.00 3.08
134 135 6.787170 TGTTACTCTTGTTCTCTCCTACCTA 58.213 40.000 0.00 0.00 0.00 3.08
135 136 7.411808 TGTTACTCTTGTTCTCTCCTACCTAT 58.588 38.462 0.00 0.00 0.00 2.57
136 137 7.556996 TGTTACTCTTGTTCTCTCCTACCTATC 59.443 40.741 0.00 0.00 0.00 2.08
137 138 6.080969 ACTCTTGTTCTCTCCTACCTATCA 57.919 41.667 0.00 0.00 0.00 2.15
138 139 6.494952 ACTCTTGTTCTCTCCTACCTATCAA 58.505 40.000 0.00 0.00 0.00 2.57
139 140 7.129425 ACTCTTGTTCTCTCCTACCTATCAAT 58.871 38.462 0.00 0.00 0.00 2.57
140 141 7.069331 ACTCTTGTTCTCTCCTACCTATCAATG 59.931 40.741 0.00 0.00 0.00 2.82
141 142 7.126061 TCTTGTTCTCTCCTACCTATCAATGA 58.874 38.462 0.00 0.00 0.00 2.57
142 143 7.619698 TCTTGTTCTCTCCTACCTATCAATGAA 59.380 37.037 0.00 0.00 0.00 2.57
143 144 7.733773 TGTTCTCTCCTACCTATCAATGAAA 57.266 36.000 0.00 0.00 0.00 2.69
144 145 8.324191 TGTTCTCTCCTACCTATCAATGAAAT 57.676 34.615 0.00 0.00 0.00 2.17
145 146 8.206867 TGTTCTCTCCTACCTATCAATGAAATG 58.793 37.037 0.00 0.00 0.00 2.32
146 147 8.424918 GTTCTCTCCTACCTATCAATGAAATGA 58.575 37.037 0.00 0.00 0.00 2.57
147 148 8.733092 TCTCTCCTACCTATCAATGAAATGAT 57.267 34.615 0.00 0.00 42.52 2.45
148 149 9.828691 TCTCTCCTACCTATCAATGAAATGATA 57.171 33.333 0.00 0.00 40.44 2.15
151 152 9.107177 CTCCTACCTATCAATGAAATGATATGC 57.893 37.037 0.00 0.00 40.51 3.14
152 153 8.605065 TCCTACCTATCAATGAAATGATATGCA 58.395 33.333 0.00 0.00 40.51 3.96
153 154 9.234827 CCTACCTATCAATGAAATGATATGCAA 57.765 33.333 0.00 0.00 40.51 4.08
156 157 9.139734 ACCTATCAATGAAATGATATGCAAACT 57.860 29.630 0.00 0.00 40.51 2.66
157 158 9.976511 CCTATCAATGAAATGATATGCAAACTT 57.023 29.630 0.00 0.00 40.51 2.66
160 161 8.609176 ATCAATGAAATGATATGCAAACTTTGC 58.391 29.630 18.03 18.03 46.00 3.68
170 171 2.323939 CAAACTTTGCGTATTGGCGA 57.676 45.000 0.00 0.00 35.06 5.54
171 172 2.656085 CAAACTTTGCGTATTGGCGAA 58.344 42.857 0.00 0.00 35.13 4.70
172 173 3.046390 CAAACTTTGCGTATTGGCGAAA 58.954 40.909 0.00 0.00 35.95 3.46
173 174 3.357166 AACTTTGCGTATTGGCGAAAA 57.643 38.095 0.00 0.00 37.09 2.29
174 175 3.357166 ACTTTGCGTATTGGCGAAAAA 57.643 38.095 0.00 0.00 38.71 1.94
196 197 6.391227 AAAAGAAGTCCAATACAACTGGTG 57.609 37.500 0.00 0.00 35.30 4.17
216 217 6.929625 TGGTGTCATCTCTTCTTCTCTTTAG 58.070 40.000 0.00 0.00 0.00 1.85
259 268 4.793216 GCAAAATTACCGTGCAAGATACTG 59.207 41.667 0.00 0.00 38.19 2.74
268 277 3.242220 CGTGCAAGATACTGTTGAGCATC 60.242 47.826 0.00 0.00 32.75 3.91
281 290 3.610040 TGAGCATCCAAACGAGTACAT 57.390 42.857 0.00 0.00 0.00 2.29
282 291 3.937814 TGAGCATCCAAACGAGTACATT 58.062 40.909 0.00 0.00 0.00 2.71
283 292 5.079689 TGAGCATCCAAACGAGTACATTA 57.920 39.130 0.00 0.00 0.00 1.90
284 293 4.868171 TGAGCATCCAAACGAGTACATTAC 59.132 41.667 0.00 0.00 0.00 1.89
285 294 5.086104 AGCATCCAAACGAGTACATTACT 57.914 39.130 0.00 0.00 42.86 2.24
286 295 6.127563 TGAGCATCCAAACGAGTACATTACTA 60.128 38.462 0.00 0.00 39.59 1.82
287 296 6.817184 AGCATCCAAACGAGTACATTACTAT 58.183 36.000 0.00 0.00 39.59 2.12
288 297 7.948357 AGCATCCAAACGAGTACATTACTATA 58.052 34.615 0.00 0.00 39.59 1.31
289 298 8.418662 AGCATCCAAACGAGTACATTACTATAA 58.581 33.333 0.00 0.00 39.59 0.98
290 299 9.204570 GCATCCAAACGAGTACATTACTATAAT 57.795 33.333 0.00 0.00 39.59 1.28
506 522 1.152383 GGTCGCCGCTGGATAAGTTC 61.152 60.000 0.00 0.00 0.00 3.01
514 530 4.058817 CCGCTGGATAAGTTCTGGTAATC 58.941 47.826 0.00 0.00 0.00 1.75
516 532 4.390264 GCTGGATAAGTTCTGGTAATCCC 58.610 47.826 0.00 0.00 36.14 3.85
579 595 1.554583 TTGCCCGGCACCTGTGTATA 61.555 55.000 13.00 0.00 38.71 1.47
605 621 2.660258 AAACAGCTCTTCCGTGCCGT 62.660 55.000 0.00 0.00 0.00 5.68
619 635 2.337532 CCGTCGTTTCCTGACCGT 59.662 61.111 0.00 0.00 32.68 4.83
626 642 2.559668 TCGTTTCCTGACCGTCAGTATT 59.440 45.455 23.83 0.00 42.80 1.89
643 659 3.576982 AGTATTCTGTCTGTCCGGACAAA 59.423 43.478 35.36 26.43 44.24 2.83
644 660 2.992124 TTCTGTCTGTCCGGACAAAA 57.008 45.000 35.36 24.25 44.24 2.44
645 661 3.485463 TTCTGTCTGTCCGGACAAAAT 57.515 42.857 35.36 0.00 44.24 1.82
646 662 4.610605 TTCTGTCTGTCCGGACAAAATA 57.389 40.909 35.36 23.11 44.24 1.40
659 675 1.815003 ACAAAATACCTCTGCTGCTGC 59.185 47.619 8.89 8.89 40.20 5.25
679 695 0.879400 CTGCACTGGAGATCGCCATC 60.879 60.000 19.23 11.36 37.30 3.51
707 723 4.130118 GGTTTCAATATCCACGCTCTCAT 58.870 43.478 0.00 0.00 0.00 2.90
808 824 0.916086 TGGGGACGGAGCAATTACAT 59.084 50.000 0.00 0.00 0.00 2.29
809 825 1.283613 TGGGGACGGAGCAATTACATT 59.716 47.619 0.00 0.00 0.00 2.71
810 826 1.676006 GGGGACGGAGCAATTACATTG 59.324 52.381 0.00 0.00 43.06 2.82
811 827 2.365582 GGGACGGAGCAATTACATTGT 58.634 47.619 0.00 0.00 42.20 2.71
812 828 3.537580 GGGACGGAGCAATTACATTGTA 58.462 45.455 0.00 0.00 42.20 2.41
813 829 3.311596 GGGACGGAGCAATTACATTGTAC 59.688 47.826 0.00 0.00 42.20 2.90
818 834 6.167685 ACGGAGCAATTACATTGTACTGTAA 58.832 36.000 9.41 9.41 43.63 2.41
866 890 1.482593 GACGTCTCCATCCTGACCAAT 59.517 52.381 8.70 0.00 0.00 3.16
891 915 1.081175 GAAGGCAAGCTGTTTCCGC 60.081 57.895 0.00 0.00 0.00 5.54
1042 1071 2.032528 TCCCCAAACAGCTCAGCG 59.967 61.111 0.00 0.00 0.00 5.18
1059 1090 2.417097 GCAGCCACAACCCACAAC 59.583 61.111 0.00 0.00 0.00 3.32
1068 1099 1.340991 ACAACCCACAACTCACTGCTT 60.341 47.619 0.00 0.00 0.00 3.91
1149 1185 4.766375 TCTTTTCGTTTGAAGGAGTGAGT 58.234 39.130 0.00 0.00 35.06 3.41
1171 1207 3.823873 TGAATTAAGGTTGTGCATCGGTT 59.176 39.130 0.00 0.00 0.00 4.44
1184 1220 2.616960 CATCGGTTGAGGTTGATCGAA 58.383 47.619 0.00 0.00 0.00 3.71
1206 1242 2.124695 GGTGACCTGATTCCGGGC 60.125 66.667 0.00 0.00 42.81 6.13
1305 1341 3.003173 TGGAAGGCGGAGGTGGAG 61.003 66.667 0.00 0.00 0.00 3.86
1692 1728 2.427905 CGTCGGTCGTTCTTCGCA 60.428 61.111 0.00 0.00 39.67 5.10
1725 1761 1.289800 GAAGAAGGGTGTTCGTCGCC 61.290 60.000 4.82 4.82 45.27 5.54
1840 1876 3.787001 GGGACGAGCCAAGAGGGG 61.787 72.222 0.00 0.00 38.95 4.79
1969 2005 1.827344 CAGTGCTGGACAGGATAGTCA 59.173 52.381 1.24 0.00 40.29 3.41
2039 2075 1.801025 CGCCATGTACATGCTACGTGA 60.801 52.381 27.27 0.00 36.76 4.35
2040 2076 1.593006 GCCATGTACATGCTACGTGAC 59.407 52.381 27.27 11.19 36.76 3.67
2201 2237 0.673333 CAGGCCGTGTATGTGCTCAA 60.673 55.000 0.00 0.00 0.00 3.02
2374 2410 6.038382 TGAATGTTAGTGGCGTTTAGAAAACA 59.962 34.615 3.68 0.00 0.00 2.83
2377 2413 3.328237 AGTGGCGTTTAGAAAACAACG 57.672 42.857 3.68 0.14 46.84 4.10
2432 2469 5.696724 ACAAGACTGCAACATGTACTTAGAC 59.303 40.000 0.00 0.00 0.00 2.59
2440 2477 5.680408 GCAACATGTACTTAGACGATACCCA 60.680 44.000 0.00 0.00 0.00 4.51
2451 2488 2.032834 ATACCCAACGCGTTGCCA 59.967 55.556 39.42 27.50 39.16 4.92
2570 2640 4.927267 AAGGTGATCCCTACATGTTTGA 57.073 40.909 2.30 0.00 45.47 2.69
2621 3772 4.520111 TGTTTATATGATGAGGTGGCATGC 59.480 41.667 9.90 9.90 0.00 4.06
2715 3866 9.236691 GTCGGATGTATATAAGACACGTTTTAA 57.763 33.333 0.00 0.00 0.00 1.52
2735 3886 9.986833 GTTTTAATTTGTTTGCTCACTCATTTT 57.013 25.926 0.00 0.00 0.00 1.82
2748 3899 7.815549 TGCTCACTCATTTTAGTTCGTATGTAA 59.184 33.333 0.00 0.00 0.00 2.41
2773 3924 7.899178 TTTCGATTAAGCATCACACTAGAAA 57.101 32.000 0.00 0.00 0.00 2.52
2774 3925 7.899178 TTCGATTAAGCATCACACTAGAAAA 57.101 32.000 0.00 0.00 0.00 2.29
2775 3926 7.899178 TCGATTAAGCATCACACTAGAAAAA 57.101 32.000 0.00 0.00 0.00 1.94
2799 3950 6.859112 AAGTCTAGATAGCAAACTCCTCAA 57.141 37.500 0.00 0.00 0.00 3.02
2832 3983 4.882427 ACTTCTCTGCTGCGTAGATAACTA 59.118 41.667 4.08 0.00 0.00 2.24
2837 3988 5.063880 TCTGCTGCGTAGATAACTATCTCA 58.936 41.667 4.08 0.00 41.85 3.27
2888 4039 9.252635 AGATTTTAGCAATCTTCTCCAAATTCT 57.747 29.630 0.00 0.00 33.47 2.40
2944 4108 4.335315 GTCACTGTTTCTGTCCAACAATCA 59.665 41.667 0.00 0.00 33.74 2.57
3008 4172 6.264518 TCGGACAATGCATCACTATACTAAGA 59.735 38.462 0.00 0.00 0.00 2.10
3011 4175 9.277783 GGACAATGCATCACTATACTAAGAAAT 57.722 33.333 0.00 0.00 0.00 2.17
3034 4198 8.663771 AATTGTAAACTATAAAACGGAAAGCG 57.336 30.769 0.00 0.00 0.00 4.68
3035 4199 7.418840 TTGTAAACTATAAAACGGAAAGCGA 57.581 32.000 0.00 0.00 0.00 4.93
3036 4200 7.418840 TGTAAACTATAAAACGGAAAGCGAA 57.581 32.000 0.00 0.00 0.00 4.70
3037 4201 7.512297 TGTAAACTATAAAACGGAAAGCGAAG 58.488 34.615 0.00 0.00 0.00 3.79
3038 4202 6.790285 AAACTATAAAACGGAAAGCGAAGA 57.210 33.333 0.00 0.00 0.00 2.87
3039 4203 6.790285 AACTATAAAACGGAAAGCGAAGAA 57.210 33.333 0.00 0.00 0.00 2.52
3040 4204 6.790285 ACTATAAAACGGAAAGCGAAGAAA 57.210 33.333 0.00 0.00 0.00 2.52
3041 4205 7.193377 ACTATAAAACGGAAAGCGAAGAAAA 57.807 32.000 0.00 0.00 0.00 2.29
3042 4206 7.813645 ACTATAAAACGGAAAGCGAAGAAAAT 58.186 30.769 0.00 0.00 0.00 1.82
3043 4207 7.961283 ACTATAAAACGGAAAGCGAAGAAAATC 59.039 33.333 0.00 0.00 0.00 2.17
3044 4208 4.561735 AAACGGAAAGCGAAGAAAATCA 57.438 36.364 0.00 0.00 0.00 2.57
3045 4209 3.537793 ACGGAAAGCGAAGAAAATCAC 57.462 42.857 0.00 0.00 0.00 3.06
3046 4210 2.225727 ACGGAAAGCGAAGAAAATCACC 59.774 45.455 0.00 0.00 0.00 4.02
3047 4211 2.484264 CGGAAAGCGAAGAAAATCACCT 59.516 45.455 0.00 0.00 0.00 4.00
3048 4212 3.058224 CGGAAAGCGAAGAAAATCACCTT 60.058 43.478 0.00 0.00 0.00 3.50
3049 4213 4.153475 CGGAAAGCGAAGAAAATCACCTTA 59.847 41.667 0.00 0.00 0.00 2.69
3050 4214 5.163754 CGGAAAGCGAAGAAAATCACCTTAT 60.164 40.000 0.00 0.00 0.00 1.73
3051 4215 6.258899 GGAAAGCGAAGAAAATCACCTTATC 58.741 40.000 0.00 0.00 0.00 1.75
3052 4216 6.094186 GGAAAGCGAAGAAAATCACCTTATCT 59.906 38.462 0.00 0.00 0.00 1.98
3053 4217 6.428385 AAGCGAAGAAAATCACCTTATCTG 57.572 37.500 0.00 0.00 0.00 2.90
3054 4218 4.333926 AGCGAAGAAAATCACCTTATCTGC 59.666 41.667 0.00 0.00 0.00 4.26
3055 4219 4.094887 GCGAAGAAAATCACCTTATCTGCA 59.905 41.667 0.00 0.00 0.00 4.41
3056 4220 5.220931 GCGAAGAAAATCACCTTATCTGCAT 60.221 40.000 0.00 0.00 0.00 3.96
3057 4221 6.678900 GCGAAGAAAATCACCTTATCTGCATT 60.679 38.462 0.00 0.00 0.00 3.56
3058 4222 7.253422 CGAAGAAAATCACCTTATCTGCATTT 58.747 34.615 0.00 0.00 0.00 2.32
3059 4223 7.756722 CGAAGAAAATCACCTTATCTGCATTTT 59.243 33.333 0.00 0.00 0.00 1.82
3060 4224 9.428097 GAAGAAAATCACCTTATCTGCATTTTT 57.572 29.630 0.00 0.00 0.00 1.94
3077 4241 2.634982 TTTTTGAGCATGTCGCCATC 57.365 45.000 0.00 0.00 44.04 3.51
3078 4242 0.447406 TTTTGAGCATGTCGCCATCG 59.553 50.000 0.00 0.00 44.04 3.84
3079 4243 1.980951 TTTGAGCATGTCGCCATCGC 61.981 55.000 0.00 0.00 44.04 4.58
3080 4244 2.891936 GAGCATGTCGCCATCGCA 60.892 61.111 0.00 0.00 44.04 5.10
3081 4245 2.436469 AGCATGTCGCCATCGCAA 60.436 55.556 0.00 0.00 44.04 4.85
3082 4246 2.277501 GCATGTCGCCATCGCAAC 60.278 61.111 0.00 0.00 35.26 4.17
3083 4247 2.753966 GCATGTCGCCATCGCAACT 61.754 57.895 0.00 0.00 35.26 3.16
3084 4248 1.796151 CATGTCGCCATCGCAACTT 59.204 52.632 0.00 0.00 35.26 2.66
3085 4249 0.521867 CATGTCGCCATCGCAACTTG 60.522 55.000 0.00 0.00 35.26 3.16
3086 4250 0.955428 ATGTCGCCATCGCAACTTGT 60.955 50.000 0.00 0.00 35.26 3.16
3087 4251 0.319986 TGTCGCCATCGCAACTTGTA 60.320 50.000 0.00 0.00 35.26 2.41
3088 4252 0.370273 GTCGCCATCGCAACTTGTAG 59.630 55.000 0.00 0.00 35.26 2.74
3089 4253 0.037697 TCGCCATCGCAACTTGTAGT 60.038 50.000 0.00 0.00 35.26 2.73
3090 4254 0.095245 CGCCATCGCAACTTGTAGTG 59.905 55.000 0.00 0.00 34.03 2.74
3091 4255 1.156736 GCCATCGCAACTTGTAGTGT 58.843 50.000 0.00 0.00 34.03 3.55
3092 4256 2.343101 GCCATCGCAACTTGTAGTGTA 58.657 47.619 0.00 0.00 34.03 2.90
3093 4257 2.093783 GCCATCGCAACTTGTAGTGTAC 59.906 50.000 0.00 0.00 34.03 2.90
3094 4258 2.344441 CCATCGCAACTTGTAGTGTACG 59.656 50.000 0.00 0.00 0.00 3.67
3095 4259 3.239254 CATCGCAACTTGTAGTGTACGA 58.761 45.455 0.00 0.00 34.00 3.43
3096 4260 3.352554 TCGCAACTTGTAGTGTACGAA 57.647 42.857 0.00 0.00 28.99 3.85
3097 4261 3.904571 TCGCAACTTGTAGTGTACGAAT 58.095 40.909 0.00 0.00 28.99 3.34
3098 4262 4.300803 TCGCAACTTGTAGTGTACGAATT 58.699 39.130 0.00 0.00 28.99 2.17
3099 4263 4.383649 TCGCAACTTGTAGTGTACGAATTC 59.616 41.667 0.00 0.00 28.99 2.17
3100 4264 4.149221 CGCAACTTGTAGTGTACGAATTCA 59.851 41.667 6.22 0.00 0.00 2.57
3101 4265 5.163992 CGCAACTTGTAGTGTACGAATTCAT 60.164 40.000 6.22 0.00 0.00 2.57
3102 4266 6.241385 GCAACTTGTAGTGTACGAATTCATC 58.759 40.000 6.22 0.00 0.00 2.92
3103 4267 6.672357 GCAACTTGTAGTGTACGAATTCATCC 60.672 42.308 6.22 0.00 0.00 3.51
3104 4268 5.416947 ACTTGTAGTGTACGAATTCATCCC 58.583 41.667 6.22 0.00 0.00 3.85
3105 4269 5.046878 ACTTGTAGTGTACGAATTCATCCCA 60.047 40.000 6.22 0.00 0.00 4.37
3106 4270 5.607939 TGTAGTGTACGAATTCATCCCAT 57.392 39.130 6.22 0.00 0.00 4.00
3107 4271 5.597806 TGTAGTGTACGAATTCATCCCATC 58.402 41.667 6.22 0.00 0.00 3.51
3108 4272 3.717707 AGTGTACGAATTCATCCCATCG 58.282 45.455 6.22 0.00 40.90 3.84
3109 4273 3.383505 AGTGTACGAATTCATCCCATCGA 59.616 43.478 6.22 0.00 38.59 3.59
3110 4274 4.039245 AGTGTACGAATTCATCCCATCGAT 59.961 41.667 6.22 0.00 38.59 3.59
3123 4287 0.729116 CATCGATGGACAACAGTGGC 59.271 55.000 17.96 0.00 0.00 5.01
3124 4288 0.740868 ATCGATGGACAACAGTGGCG 60.741 55.000 0.00 0.00 31.03 5.69
3125 4289 2.390599 CGATGGACAACAGTGGCGG 61.391 63.158 0.00 0.00 31.03 6.13
3126 4290 1.003839 GATGGACAACAGTGGCGGA 60.004 57.895 0.00 0.00 31.03 5.54
3127 4291 1.003355 ATGGACAACAGTGGCGGAG 60.003 57.895 0.00 0.00 31.03 4.63
3128 4292 2.358737 GGACAACAGTGGCGGAGG 60.359 66.667 0.00 0.00 31.03 4.30
3129 4293 2.358737 GACAACAGTGGCGGAGGG 60.359 66.667 0.00 0.00 0.00 4.30
3130 4294 3.901797 GACAACAGTGGCGGAGGGG 62.902 68.421 0.00 0.00 0.00 4.79
3131 4295 3.953775 CAACAGTGGCGGAGGGGT 61.954 66.667 0.00 0.00 0.00 4.95
3132 4296 3.175710 AACAGTGGCGGAGGGGTT 61.176 61.111 0.00 0.00 0.00 4.11
3133 4297 3.491598 AACAGTGGCGGAGGGGTTG 62.492 63.158 0.00 0.00 0.00 3.77
3134 4298 4.722700 CAGTGGCGGAGGGGTTGG 62.723 72.222 0.00 0.00 0.00 3.77
3138 4302 4.484872 GGCGGAGGGGTTGGCTAC 62.485 72.222 0.00 0.00 0.00 3.58
3139 4303 4.832608 GCGGAGGGGTTGGCTACG 62.833 72.222 0.00 0.00 0.00 3.51
3140 4304 3.387947 CGGAGGGGTTGGCTACGT 61.388 66.667 0.00 0.00 0.00 3.57
3141 4305 2.267961 GGAGGGGTTGGCTACGTG 59.732 66.667 0.00 0.00 0.00 4.49
3142 4306 2.267961 GAGGGGTTGGCTACGTGG 59.732 66.667 0.00 0.00 0.00 4.94
3143 4307 3.971109 GAGGGGTTGGCTACGTGGC 62.971 68.421 16.51 16.51 42.18 5.01
3149 4313 3.390521 TGGCTACGTGGCAGGAGG 61.391 66.667 25.79 6.96 46.76 4.30
3150 4314 3.075005 GGCTACGTGGCAGGAGGA 61.075 66.667 25.79 0.00 41.37 3.71
3151 4315 2.496817 GCTACGTGGCAGGAGGAG 59.503 66.667 19.95 8.85 0.00 3.69
3152 4316 3.082579 GCTACGTGGCAGGAGGAGG 62.083 68.421 19.95 0.51 0.00 4.30
3153 4317 3.075005 TACGTGGCAGGAGGAGGC 61.075 66.667 14.98 0.00 0.00 4.70
3192 4356 2.585247 GCGACATGGCGAGGGTAC 60.585 66.667 28.68 0.57 0.00 3.34
3193 4357 2.278596 CGACATGGCGAGGGTACG 60.279 66.667 18.41 0.00 0.00 3.67
3194 4358 2.890371 GACATGGCGAGGGTACGT 59.110 61.111 0.00 0.00 35.59 3.57
3195 4359 1.717791 CGACATGGCGAGGGTACGTA 61.718 60.000 18.41 0.00 35.59 3.57
3196 4360 0.030369 GACATGGCGAGGGTACGTAG 59.970 60.000 0.00 0.00 35.59 3.51
3197 4361 0.394762 ACATGGCGAGGGTACGTAGA 60.395 55.000 0.00 0.00 35.59 2.59
3198 4362 0.030369 CATGGCGAGGGTACGTAGAC 59.970 60.000 0.00 0.00 35.59 2.59
3199 4363 1.105759 ATGGCGAGGGTACGTAGACC 61.106 60.000 7.93 7.93 38.93 3.85
3200 4364 1.750399 GGCGAGGGTACGTAGACCA 60.750 63.158 16.21 0.00 41.73 4.02
3201 4365 1.722636 GGCGAGGGTACGTAGACCAG 61.723 65.000 16.21 11.31 41.73 4.00
3202 4366 1.722636 GCGAGGGTACGTAGACCAGG 61.723 65.000 16.21 9.51 41.73 4.45
3203 4367 1.722636 CGAGGGTACGTAGACCAGGC 61.723 65.000 16.21 6.43 41.73 4.85
3204 4368 1.722636 GAGGGTACGTAGACCAGGCG 61.723 65.000 16.21 0.00 41.73 5.52
3205 4369 2.103736 GGTACGTAGACCAGGCGC 59.896 66.667 0.00 0.00 39.51 6.53
3206 4370 2.703798 GGTACGTAGACCAGGCGCA 61.704 63.158 10.83 0.00 39.51 6.09
3207 4371 1.436336 GTACGTAGACCAGGCGCAT 59.564 57.895 10.83 0.00 0.00 4.73
3208 4372 0.179119 GTACGTAGACCAGGCGCATT 60.179 55.000 10.83 0.00 0.00 3.56
3209 4373 0.101759 TACGTAGACCAGGCGCATTC 59.898 55.000 10.83 0.00 0.00 2.67
3210 4374 1.141881 CGTAGACCAGGCGCATTCT 59.858 57.895 10.83 5.47 0.00 2.40
3211 4375 0.460284 CGTAGACCAGGCGCATTCTT 60.460 55.000 10.83 0.00 0.00 2.52
3212 4376 1.291132 GTAGACCAGGCGCATTCTTC 58.709 55.000 10.83 0.00 0.00 2.87
3213 4377 1.134670 GTAGACCAGGCGCATTCTTCT 60.135 52.381 10.83 5.87 0.00 2.85
3214 4378 0.326264 AGACCAGGCGCATTCTTCTT 59.674 50.000 10.83 0.00 0.00 2.52
3215 4379 1.168714 GACCAGGCGCATTCTTCTTT 58.831 50.000 10.83 0.00 0.00 2.52
3216 4380 1.541588 GACCAGGCGCATTCTTCTTTT 59.458 47.619 10.83 0.00 0.00 2.27
3217 4381 1.963515 ACCAGGCGCATTCTTCTTTTT 59.036 42.857 10.83 0.00 0.00 1.94
3218 4382 2.029918 ACCAGGCGCATTCTTCTTTTTC 60.030 45.455 10.83 0.00 0.00 2.29
3219 4383 2.229784 CCAGGCGCATTCTTCTTTTTCT 59.770 45.455 10.83 0.00 0.00 2.52
3220 4384 3.305608 CCAGGCGCATTCTTCTTTTTCTT 60.306 43.478 10.83 0.00 0.00 2.52
3221 4385 4.301628 CAGGCGCATTCTTCTTTTTCTTT 58.698 39.130 10.83 0.00 0.00 2.52
3222 4386 4.149396 CAGGCGCATTCTTCTTTTTCTTTG 59.851 41.667 10.83 0.00 0.00 2.77
3223 4387 3.120889 GGCGCATTCTTCTTTTTCTTTGC 60.121 43.478 10.83 0.00 0.00 3.68
3224 4388 4.283950 CGCATTCTTCTTTTTCTTTGCG 57.716 40.909 0.00 0.00 44.39 4.85
3227 4391 6.075585 GCATTCTTCTTTTTCTTTGCGATC 57.924 37.500 0.00 0.00 0.00 3.69
3228 4392 5.219914 GCATTCTTCTTTTTCTTTGCGATCG 60.220 40.000 11.69 11.69 0.00 3.69
3229 4393 5.418310 TTCTTCTTTTTCTTTGCGATCGT 57.582 34.783 17.81 0.00 0.00 3.73
3230 4394 5.018695 TCTTCTTTTTCTTTGCGATCGTC 57.981 39.130 17.81 9.69 0.00 4.20
3231 4395 3.433709 TCTTTTTCTTTGCGATCGTCG 57.566 42.857 17.81 3.01 43.89 5.12
3240 4404 4.146640 CGATCGTCGCTGTGTTGA 57.853 55.556 7.03 0.00 31.14 3.18
3241 4405 1.696644 CGATCGTCGCTGTGTTGAC 59.303 57.895 7.03 0.00 31.14 3.18
3242 4406 1.001745 CGATCGTCGCTGTGTTGACA 61.002 55.000 7.03 0.00 34.78 3.58
3249 4413 2.281070 CTGTGTTGACAGCCGCCT 60.281 61.111 0.00 0.00 43.24 5.52
3250 4414 1.893808 CTGTGTTGACAGCCGCCTT 60.894 57.895 0.00 0.00 43.24 4.35
3251 4415 1.447317 CTGTGTTGACAGCCGCCTTT 61.447 55.000 0.00 0.00 43.24 3.11
3252 4416 1.034838 TGTGTTGACAGCCGCCTTTT 61.035 50.000 0.00 0.00 0.00 2.27
3253 4417 0.317854 GTGTTGACAGCCGCCTTTTC 60.318 55.000 0.00 0.00 0.00 2.29
3254 4418 1.082104 GTTGACAGCCGCCTTTTCG 60.082 57.895 0.00 0.00 0.00 3.46
3263 4427 3.045492 GCCTTTTCGGTCGGCGAA 61.045 61.111 12.92 0.00 33.64 4.70
3264 4428 2.858158 CCTTTTCGGTCGGCGAAC 59.142 61.111 16.41 16.41 0.00 3.95
3265 4429 1.957186 CCTTTTCGGTCGGCGAACA 60.957 57.895 26.09 9.40 0.00 3.18
3266 4430 1.500512 CCTTTTCGGTCGGCGAACAA 61.501 55.000 26.09 15.03 0.00 2.83
3267 4431 0.515564 CTTTTCGGTCGGCGAACAAT 59.484 50.000 26.09 0.00 0.00 2.71
3268 4432 0.945813 TTTTCGGTCGGCGAACAATT 59.054 45.000 26.09 0.00 0.00 2.32
3269 4433 0.513820 TTTCGGTCGGCGAACAATTC 59.486 50.000 26.09 4.95 0.00 2.17
3270 4434 1.293267 TTCGGTCGGCGAACAATTCC 61.293 55.000 26.09 13.67 0.00 3.01
3271 4435 1.740296 CGGTCGGCGAACAATTCCT 60.740 57.895 26.09 0.00 0.00 3.36
3272 4436 1.296056 CGGTCGGCGAACAATTCCTT 61.296 55.000 26.09 0.00 0.00 3.36
3273 4437 0.879090 GGTCGGCGAACAATTCCTTT 59.121 50.000 21.87 0.00 0.00 3.11
3274 4438 1.268625 GGTCGGCGAACAATTCCTTTT 59.731 47.619 21.87 0.00 0.00 2.27
3275 4439 2.315901 GTCGGCGAACAATTCCTTTTG 58.684 47.619 12.92 0.00 0.00 2.44
3276 4440 1.950909 TCGGCGAACAATTCCTTTTGT 59.049 42.857 7.35 0.00 41.49 2.83
3277 4441 2.031508 TCGGCGAACAATTCCTTTTGTC 60.032 45.455 7.35 0.00 38.85 3.18
3278 4442 2.315901 GGCGAACAATTCCTTTTGTCG 58.684 47.619 0.00 0.00 38.85 4.35
3279 4443 2.315901 GCGAACAATTCCTTTTGTCGG 58.684 47.619 0.00 0.00 38.85 4.79
3280 4444 2.287368 GCGAACAATTCCTTTTGTCGGT 60.287 45.455 0.00 0.00 38.85 4.69
3281 4445 3.551551 CGAACAATTCCTTTTGTCGGTC 58.448 45.455 0.00 0.00 38.85 4.79
3282 4446 3.608474 CGAACAATTCCTTTTGTCGGTCC 60.608 47.826 0.00 0.00 38.85 4.46
3283 4447 1.877443 ACAATTCCTTTTGTCGGTCCG 59.123 47.619 4.39 4.39 34.83 4.79
3284 4448 1.877443 CAATTCCTTTTGTCGGTCCGT 59.123 47.619 11.88 0.00 0.00 4.69
3285 4449 2.265589 ATTCCTTTTGTCGGTCCGTT 57.734 45.000 11.88 0.00 0.00 4.44
3286 4450 1.301423 TTCCTTTTGTCGGTCCGTTG 58.699 50.000 11.88 0.00 0.00 4.10
3287 4451 1.161563 TCCTTTTGTCGGTCCGTTGC 61.162 55.000 11.88 3.85 0.00 4.17
3288 4452 1.440938 CCTTTTGTCGGTCCGTTGCA 61.441 55.000 11.88 6.51 0.00 4.08
3289 4453 0.316689 CTTTTGTCGGTCCGTTGCAC 60.317 55.000 11.88 2.25 0.00 4.57
3290 4454 1.716826 TTTTGTCGGTCCGTTGCACC 61.717 55.000 11.88 0.00 0.00 5.01
3291 4455 2.871216 TTTGTCGGTCCGTTGCACCA 62.871 55.000 11.88 0.00 32.89 4.17
3292 4456 2.589442 GTCGGTCCGTTGCACCAA 60.589 61.111 11.88 0.00 32.89 3.67
3293 4457 2.280524 TCGGTCCGTTGCACCAAG 60.281 61.111 11.88 0.00 32.89 3.61
3294 4458 3.353836 CGGTCCGTTGCACCAAGG 61.354 66.667 2.08 0.00 32.89 3.61
3295 4459 2.203294 GGTCCGTTGCACCAAGGT 60.203 61.111 0.00 0.00 33.63 3.50
3296 4460 2.258726 GGTCCGTTGCACCAAGGTC 61.259 63.158 0.00 0.00 33.63 3.85
3297 4461 1.525077 GTCCGTTGCACCAAGGTCA 60.525 57.895 0.00 0.00 0.00 4.02
3298 4462 1.227823 TCCGTTGCACCAAGGTCAG 60.228 57.895 0.00 0.00 0.00 3.51
3299 4463 1.525995 CCGTTGCACCAAGGTCAGT 60.526 57.895 0.00 0.00 0.00 3.41
3300 4464 0.250124 CCGTTGCACCAAGGTCAGTA 60.250 55.000 0.00 0.00 0.00 2.74
3301 4465 1.588674 CGTTGCACCAAGGTCAGTAA 58.411 50.000 0.00 0.00 0.00 2.24
3302 4466 1.531149 CGTTGCACCAAGGTCAGTAAG 59.469 52.381 0.00 0.00 0.00 2.34
3303 4467 1.880027 GTTGCACCAAGGTCAGTAAGG 59.120 52.381 0.00 0.00 0.00 2.69
3304 4468 1.136828 TGCACCAAGGTCAGTAAGGT 58.863 50.000 0.00 0.00 0.00 3.50
3306 4470 2.185004 CACCAAGGTCAGTAAGGTGG 57.815 55.000 0.00 0.00 44.55 4.61
3307 4471 1.420138 CACCAAGGTCAGTAAGGTGGT 59.580 52.381 0.00 0.00 44.55 4.16
3308 4472 1.697982 ACCAAGGTCAGTAAGGTGGTC 59.302 52.381 0.00 0.00 34.23 4.02
3309 4473 1.337823 CCAAGGTCAGTAAGGTGGTCG 60.338 57.143 0.00 0.00 0.00 4.79
3310 4474 1.343465 CAAGGTCAGTAAGGTGGTCGT 59.657 52.381 0.00 0.00 0.00 4.34
3311 4475 0.966920 AGGTCAGTAAGGTGGTCGTG 59.033 55.000 0.00 0.00 0.00 4.35
3312 4476 0.669625 GGTCAGTAAGGTGGTCGTGC 60.670 60.000 0.00 0.00 0.00 5.34
3313 4477 0.669625 GTCAGTAAGGTGGTCGTGCC 60.670 60.000 0.00 0.00 37.90 5.01
3314 4478 0.830444 TCAGTAAGGTGGTCGTGCCT 60.830 55.000 1.06 0.00 38.35 4.75
3315 4479 0.670546 CAGTAAGGTGGTCGTGCCTG 60.671 60.000 0.00 0.00 38.35 4.85
3316 4480 0.830444 AGTAAGGTGGTCGTGCCTGA 60.830 55.000 0.00 0.00 38.35 3.86
3317 4481 0.389948 GTAAGGTGGTCGTGCCTGAG 60.390 60.000 0.00 0.00 38.35 3.35
3318 4482 1.541310 TAAGGTGGTCGTGCCTGAGG 61.541 60.000 0.00 0.00 38.35 3.86
3319 4483 4.394712 GGTGGTCGTGCCTGAGGG 62.395 72.222 0.00 0.00 38.35 4.30
3320 4484 3.626924 GTGGTCGTGCCTGAGGGT 61.627 66.667 0.00 0.00 38.35 4.34
3321 4485 3.311110 TGGTCGTGCCTGAGGGTC 61.311 66.667 0.00 0.00 38.35 4.46
3322 4486 2.997897 GGTCGTGCCTGAGGGTCT 60.998 66.667 0.00 0.00 34.45 3.85
3323 4487 2.262915 GTCGTGCCTGAGGGTCTG 59.737 66.667 0.00 0.00 34.45 3.51
3324 4488 2.203640 TCGTGCCTGAGGGTCTGT 60.204 61.111 0.00 0.00 34.45 3.41
3325 4489 2.262915 CGTGCCTGAGGGTCTGTC 59.737 66.667 0.00 0.00 34.45 3.51
3326 4490 2.262915 GTGCCTGAGGGTCTGTCG 59.737 66.667 0.00 0.00 34.45 4.35
3327 4491 2.203640 TGCCTGAGGGTCTGTCGT 60.204 61.111 0.00 0.00 34.45 4.34
3328 4492 1.837051 TGCCTGAGGGTCTGTCGTT 60.837 57.895 0.00 0.00 34.45 3.85
3329 4493 1.374758 GCCTGAGGGTCTGTCGTTG 60.375 63.158 0.00 0.00 34.45 4.10
3330 4494 1.816863 GCCTGAGGGTCTGTCGTTGA 61.817 60.000 0.00 0.00 34.45 3.18
3331 4495 0.038159 CCTGAGGGTCTGTCGTTGAC 60.038 60.000 0.00 0.00 0.00 3.18
3332 4496 0.387367 CTGAGGGTCTGTCGTTGACG 60.387 60.000 0.00 0.00 41.45 4.35
3333 4497 1.733399 GAGGGTCTGTCGTTGACGC 60.733 63.158 0.00 11.69 44.37 5.19
3334 4498 2.338984 GGGTCTGTCGTTGACGCT 59.661 61.111 0.00 0.00 41.95 5.07
3335 4499 1.300697 GGGTCTGTCGTTGACGCTT 60.301 57.895 0.00 0.00 41.95 4.68
3336 4500 0.878961 GGGTCTGTCGTTGACGCTTT 60.879 55.000 0.00 0.00 41.95 3.51
3337 4501 0.232303 GGTCTGTCGTTGACGCTTTG 59.768 55.000 0.00 0.00 39.60 2.77
3338 4502 0.383124 GTCTGTCGTTGACGCTTTGC 60.383 55.000 0.00 0.00 39.60 3.68
3339 4503 0.529773 TCTGTCGTTGACGCTTTGCT 60.530 50.000 0.00 0.00 39.60 3.91
3340 4504 0.383491 CTGTCGTTGACGCTTTGCTG 60.383 55.000 0.00 0.00 39.60 4.41
3341 4505 1.722507 GTCGTTGACGCTTTGCTGC 60.723 57.895 0.00 0.00 39.60 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.251527 CCAGAGCACCTAGACCACGT 61.252 60.000 0.00 0.00 0.00 4.49
1 2 1.513158 CCAGAGCACCTAGACCACG 59.487 63.158 0.00 0.00 0.00 4.94
2 3 0.905337 ACCCAGAGCACCTAGACCAC 60.905 60.000 0.00 0.00 0.00 4.16
3 4 0.614979 GACCCAGAGCACCTAGACCA 60.615 60.000 0.00 0.00 0.00 4.02
4 5 0.324830 AGACCCAGAGCACCTAGACC 60.325 60.000 0.00 0.00 0.00 3.85
5 6 1.107945 GAGACCCAGAGCACCTAGAC 58.892 60.000 0.00 0.00 0.00 2.59
6 7 0.394488 CGAGACCCAGAGCACCTAGA 60.394 60.000 0.00 0.00 0.00 2.43
7 8 0.681564 ACGAGACCCAGAGCACCTAG 60.682 60.000 0.00 0.00 0.00 3.02
8 9 0.680280 GACGAGACCCAGAGCACCTA 60.680 60.000 0.00 0.00 0.00 3.08
9 10 1.979693 GACGAGACCCAGAGCACCT 60.980 63.158 0.00 0.00 0.00 4.00
10 11 1.939769 GAGACGAGACCCAGAGCACC 61.940 65.000 0.00 0.00 0.00 5.01
11 12 1.509004 GAGACGAGACCCAGAGCAC 59.491 63.158 0.00 0.00 0.00 4.40
12 13 1.679305 GGAGACGAGACCCAGAGCA 60.679 63.158 0.00 0.00 0.00 4.26
13 14 1.379309 AGGAGACGAGACCCAGAGC 60.379 63.158 0.00 0.00 0.00 4.09
14 15 1.092921 CGAGGAGACGAGACCCAGAG 61.093 65.000 0.00 0.00 35.09 3.35
15 16 1.078356 CGAGGAGACGAGACCCAGA 60.078 63.158 0.00 0.00 35.09 3.86
16 17 2.766400 GCGAGGAGACGAGACCCAG 61.766 68.421 0.00 0.00 35.09 4.45
17 18 2.750637 GCGAGGAGACGAGACCCA 60.751 66.667 0.00 0.00 35.09 4.51
18 19 3.519930 GGCGAGGAGACGAGACCC 61.520 72.222 0.00 0.00 35.09 4.46
19 20 1.995646 GAAGGCGAGGAGACGAGACC 61.996 65.000 0.00 0.00 35.09 3.85
20 21 1.430228 GAAGGCGAGGAGACGAGAC 59.570 63.158 0.00 0.00 35.09 3.36
21 22 1.749638 GGAAGGCGAGGAGACGAGA 60.750 63.158 0.00 0.00 35.09 4.04
22 23 1.316706 AAGGAAGGCGAGGAGACGAG 61.317 60.000 0.00 0.00 35.09 4.18
23 24 1.304217 AAGGAAGGCGAGGAGACGA 60.304 57.895 0.00 0.00 35.09 4.20
24 25 1.153745 CAAGGAAGGCGAGGAGACG 60.154 63.158 0.00 0.00 0.00 4.18
25 26 1.219393 CCAAGGAAGGCGAGGAGAC 59.781 63.158 0.00 0.00 0.00 3.36
26 27 2.660064 GCCAAGGAAGGCGAGGAGA 61.660 63.158 0.00 0.00 46.12 3.71
27 28 2.124942 GCCAAGGAAGGCGAGGAG 60.125 66.667 0.00 0.00 46.12 3.69
34 35 1.202927 TCAAACTCCAGCCAAGGAAGG 60.203 52.381 0.00 0.00 37.20 3.46
35 36 2.157738 CTCAAACTCCAGCCAAGGAAG 58.842 52.381 0.00 0.00 37.20 3.46
36 37 1.819305 GCTCAAACTCCAGCCAAGGAA 60.819 52.381 0.00 0.00 37.20 3.36
37 38 0.250901 GCTCAAACTCCAGCCAAGGA 60.251 55.000 0.00 0.00 36.00 3.36
38 39 0.251077 AGCTCAAACTCCAGCCAAGG 60.251 55.000 0.00 0.00 36.17 3.61
39 40 2.354259 CTAGCTCAAACTCCAGCCAAG 58.646 52.381 0.00 0.00 36.17 3.61
40 41 1.003580 CCTAGCTCAAACTCCAGCCAA 59.996 52.381 0.00 0.00 36.17 4.52
41 42 0.615331 CCTAGCTCAAACTCCAGCCA 59.385 55.000 0.00 0.00 36.17 4.75
42 43 0.905357 TCCTAGCTCAAACTCCAGCC 59.095 55.000 0.00 0.00 36.17 4.85
43 44 2.770164 TTCCTAGCTCAAACTCCAGC 57.230 50.000 0.00 0.00 35.73 4.85
44 45 4.543590 TCTTTCCTAGCTCAAACTCCAG 57.456 45.455 0.00 0.00 0.00 3.86
45 46 5.505181 AATCTTTCCTAGCTCAAACTCCA 57.495 39.130 0.00 0.00 0.00 3.86
46 47 7.051000 ACATAATCTTTCCTAGCTCAAACTCC 58.949 38.462 0.00 0.00 0.00 3.85
47 48 8.394121 CAACATAATCTTTCCTAGCTCAAACTC 58.606 37.037 0.00 0.00 0.00 3.01
48 49 7.885399 ACAACATAATCTTTCCTAGCTCAAACT 59.115 33.333 0.00 0.00 0.00 2.66
49 50 7.965107 CACAACATAATCTTTCCTAGCTCAAAC 59.035 37.037 0.00 0.00 0.00 2.93
50 51 7.665559 ACACAACATAATCTTTCCTAGCTCAAA 59.334 33.333 0.00 0.00 0.00 2.69
51 52 7.168219 ACACAACATAATCTTTCCTAGCTCAA 58.832 34.615 0.00 0.00 0.00 3.02
52 53 6.711277 ACACAACATAATCTTTCCTAGCTCA 58.289 36.000 0.00 0.00 0.00 4.26
53 54 7.119846 ACAACACAACATAATCTTTCCTAGCTC 59.880 37.037 0.00 0.00 0.00 4.09
54 55 6.942576 ACAACACAACATAATCTTTCCTAGCT 59.057 34.615 0.00 0.00 0.00 3.32
55 56 7.145932 ACAACACAACATAATCTTTCCTAGC 57.854 36.000 0.00 0.00 0.00 3.42
58 59 9.520515 AGAATACAACACAACATAATCTTTCCT 57.479 29.630 0.00 0.00 0.00 3.36
63 64 8.739972 GGGAAAGAATACAACACAACATAATCT 58.260 33.333 0.00 0.00 0.00 2.40
64 65 8.519526 TGGGAAAGAATACAACACAACATAATC 58.480 33.333 0.00 0.00 0.00 1.75
65 66 8.303876 GTGGGAAAGAATACAACACAACATAAT 58.696 33.333 0.00 0.00 0.00 1.28
66 67 7.504238 AGTGGGAAAGAATACAACACAACATAA 59.496 33.333 0.00 0.00 0.00 1.90
67 68 7.001674 AGTGGGAAAGAATACAACACAACATA 58.998 34.615 0.00 0.00 0.00 2.29
68 69 5.833131 AGTGGGAAAGAATACAACACAACAT 59.167 36.000 0.00 0.00 0.00 2.71
69 70 5.197451 AGTGGGAAAGAATACAACACAACA 58.803 37.500 0.00 0.00 0.00 3.33
70 71 5.767816 AGTGGGAAAGAATACAACACAAC 57.232 39.130 0.00 0.00 0.00 3.32
71 72 5.300792 GGAAGTGGGAAAGAATACAACACAA 59.699 40.000 0.00 0.00 0.00 3.33
72 73 4.825085 GGAAGTGGGAAAGAATACAACACA 59.175 41.667 0.00 0.00 0.00 3.72
73 74 4.217767 GGGAAGTGGGAAAGAATACAACAC 59.782 45.833 0.00 0.00 0.00 3.32
74 75 4.403734 GGGAAGTGGGAAAGAATACAACA 58.596 43.478 0.00 0.00 0.00 3.33
75 76 3.762288 GGGGAAGTGGGAAAGAATACAAC 59.238 47.826 0.00 0.00 0.00 3.32
76 77 3.245479 GGGGGAAGTGGGAAAGAATACAA 60.245 47.826 0.00 0.00 0.00 2.41
77 78 2.310647 GGGGGAAGTGGGAAAGAATACA 59.689 50.000 0.00 0.00 0.00 2.29
78 79 2.581246 AGGGGGAAGTGGGAAAGAATAC 59.419 50.000 0.00 0.00 0.00 1.89
79 80 2.850568 GAGGGGGAAGTGGGAAAGAATA 59.149 50.000 0.00 0.00 0.00 1.75
80 81 1.641192 GAGGGGGAAGTGGGAAAGAAT 59.359 52.381 0.00 0.00 0.00 2.40
81 82 1.073098 GAGGGGGAAGTGGGAAAGAA 58.927 55.000 0.00 0.00 0.00 2.52
82 83 0.196118 AGAGGGGGAAGTGGGAAAGA 59.804 55.000 0.00 0.00 0.00 2.52
83 84 0.621082 GAGAGGGGGAAGTGGGAAAG 59.379 60.000 0.00 0.00 0.00 2.62
84 85 0.196118 AGAGAGGGGGAAGTGGGAAA 59.804 55.000 0.00 0.00 0.00 3.13
85 86 0.196118 AAGAGAGGGGGAAGTGGGAA 59.804 55.000 0.00 0.00 0.00 3.97
86 87 1.098589 TAAGAGAGGGGGAAGTGGGA 58.901 55.000 0.00 0.00 0.00 4.37
87 88 2.050918 GATAAGAGAGGGGGAAGTGGG 58.949 57.143 0.00 0.00 0.00 4.61
88 89 3.053359 AGATAAGAGAGGGGGAAGTGG 57.947 52.381 0.00 0.00 0.00 4.00
89 90 5.151454 ACATAGATAAGAGAGGGGGAAGTG 58.849 45.833 0.00 0.00 0.00 3.16
90 91 5.426325 ACATAGATAAGAGAGGGGGAAGT 57.574 43.478 0.00 0.00 0.00 3.01
91 92 7.013834 AGTAACATAGATAAGAGAGGGGGAAG 58.986 42.308 0.00 0.00 0.00 3.46
92 93 6.935036 AGTAACATAGATAAGAGAGGGGGAA 58.065 40.000 0.00 0.00 0.00 3.97
93 94 6.335850 AGAGTAACATAGATAAGAGAGGGGGA 59.664 42.308 0.00 0.00 0.00 4.81
94 95 6.557568 AGAGTAACATAGATAAGAGAGGGGG 58.442 44.000 0.00 0.00 0.00 5.40
95 96 7.507616 ACAAGAGTAACATAGATAAGAGAGGGG 59.492 40.741 0.00 0.00 0.00 4.79
96 97 8.472007 ACAAGAGTAACATAGATAAGAGAGGG 57.528 38.462 0.00 0.00 0.00 4.30
97 98 9.959749 GAACAAGAGTAACATAGATAAGAGAGG 57.040 37.037 0.00 0.00 0.00 3.69
102 103 9.959749 GGAGAGAACAAGAGTAACATAGATAAG 57.040 37.037 0.00 0.00 0.00 1.73
103 104 9.702253 AGGAGAGAACAAGAGTAACATAGATAA 57.298 33.333 0.00 0.00 0.00 1.75
105 106 9.127277 GTAGGAGAGAACAAGAGTAACATAGAT 57.873 37.037 0.00 0.00 0.00 1.98
106 107 7.556996 GGTAGGAGAGAACAAGAGTAACATAGA 59.443 40.741 0.00 0.00 0.00 1.98
107 108 7.558444 AGGTAGGAGAGAACAAGAGTAACATAG 59.442 40.741 0.00 0.00 0.00 2.23
108 109 7.411808 AGGTAGGAGAGAACAAGAGTAACATA 58.588 38.462 0.00 0.00 0.00 2.29
109 110 6.257586 AGGTAGGAGAGAACAAGAGTAACAT 58.742 40.000 0.00 0.00 0.00 2.71
110 111 5.642165 AGGTAGGAGAGAACAAGAGTAACA 58.358 41.667 0.00 0.00 0.00 2.41
111 112 7.556996 TGATAGGTAGGAGAGAACAAGAGTAAC 59.443 40.741 0.00 0.00 0.00 2.50
112 113 7.640313 TGATAGGTAGGAGAGAACAAGAGTAA 58.360 38.462 0.00 0.00 0.00 2.24
113 114 7.209340 TGATAGGTAGGAGAGAACAAGAGTA 57.791 40.000 0.00 0.00 0.00 2.59
114 115 6.080969 TGATAGGTAGGAGAGAACAAGAGT 57.919 41.667 0.00 0.00 0.00 3.24
115 116 7.286546 TCATTGATAGGTAGGAGAGAACAAGAG 59.713 40.741 0.00 0.00 0.00 2.85
116 117 7.126061 TCATTGATAGGTAGGAGAGAACAAGA 58.874 38.462 0.00 0.00 0.00 3.02
117 118 7.353414 TCATTGATAGGTAGGAGAGAACAAG 57.647 40.000 0.00 0.00 0.00 3.16
118 119 7.733773 TTCATTGATAGGTAGGAGAGAACAA 57.266 36.000 0.00 0.00 0.00 2.83
119 120 7.733773 TTTCATTGATAGGTAGGAGAGAACA 57.266 36.000 0.00 0.00 0.00 3.18
120 121 8.424918 TCATTTCATTGATAGGTAGGAGAGAAC 58.575 37.037 0.00 0.00 0.00 3.01
121 122 8.553085 TCATTTCATTGATAGGTAGGAGAGAA 57.447 34.615 0.00 0.00 0.00 2.87
122 123 8.733092 ATCATTTCATTGATAGGTAGGAGAGA 57.267 34.615 0.00 0.00 34.59 3.10
125 126 9.107177 GCATATCATTTCATTGATAGGTAGGAG 57.893 37.037 7.63 0.00 40.65 3.69
126 127 8.605065 TGCATATCATTTCATTGATAGGTAGGA 58.395 33.333 7.63 0.00 40.65 2.94
127 128 8.797350 TGCATATCATTTCATTGATAGGTAGG 57.203 34.615 7.63 0.00 40.65 3.18
130 131 9.139734 AGTTTGCATATCATTTCATTGATAGGT 57.860 29.630 7.63 0.00 40.65 3.08
131 132 9.976511 AAGTTTGCATATCATTTCATTGATAGG 57.023 29.630 0.00 2.65 40.82 2.57
151 152 2.323939 TCGCCAATACGCAAAGTTTG 57.676 45.000 11.41 11.41 0.00 2.93
152 153 3.357166 TTTCGCCAATACGCAAAGTTT 57.643 38.095 0.00 0.00 0.00 2.66
153 154 3.357166 TTTTCGCCAATACGCAAAGTT 57.643 38.095 0.00 0.00 0.00 2.66
154 155 3.357166 TTTTTCGCCAATACGCAAAGT 57.643 38.095 0.00 0.00 30.34 2.66
172 173 6.379988 ACACCAGTTGTATTGGACTTCTTTTT 59.620 34.615 0.00 0.00 36.32 1.94
173 174 5.891551 ACACCAGTTGTATTGGACTTCTTTT 59.108 36.000 0.00 0.00 36.32 2.27
174 175 5.445964 ACACCAGTTGTATTGGACTTCTTT 58.554 37.500 0.00 0.00 36.32 2.52
175 176 5.048846 ACACCAGTTGTATTGGACTTCTT 57.951 39.130 0.00 0.00 36.32 2.52
192 193 5.815233 AAAGAGAAGAAGAGATGACACCA 57.185 39.130 0.00 0.00 0.00 4.17
196 197 8.050778 TCAGACTAAAGAGAAGAAGAGATGAC 57.949 38.462 0.00 0.00 0.00 3.06
216 217 5.125100 TGCATGGAATTGTTTCTTCAGAC 57.875 39.130 0.00 0.00 32.16 3.51
232 236 2.360553 TGCACGGTAATTTTGCATGG 57.639 45.000 0.00 0.00 41.29 3.66
253 257 3.932710 TCGTTTGGATGCTCAACAGTATC 59.067 43.478 1.89 0.00 40.21 2.24
259 268 3.064207 TGTACTCGTTTGGATGCTCAAC 58.936 45.455 0.00 0.00 0.00 3.18
341 350 6.376056 GTTTGGAACGCAGATATGAAAAAC 57.624 37.500 0.00 0.00 0.00 2.43
420 429 2.738521 ACACATCCACGTCGCTGC 60.739 61.111 0.00 0.00 0.00 5.25
506 522 3.380471 TGTGGATTTGGGGATTACCAG 57.620 47.619 0.00 0.00 42.47 4.00
514 530 1.467920 GCTCTCTTGTGGATTTGGGG 58.532 55.000 0.00 0.00 0.00 4.96
516 532 2.099141 TCGCTCTCTTGTGGATTTGG 57.901 50.000 0.00 0.00 0.00 3.28
619 635 2.753452 GTCCGGACAGACAGAATACTGA 59.247 50.000 29.75 0.00 46.03 3.41
626 642 3.306502 GGTATTTTGTCCGGACAGACAGA 60.307 47.826 34.25 19.04 46.90 3.41
643 659 0.107312 CAGGCAGCAGCAGAGGTATT 60.107 55.000 2.65 0.00 44.61 1.89
644 660 1.525923 CAGGCAGCAGCAGAGGTAT 59.474 57.895 2.65 0.00 44.61 2.73
645 661 2.984623 CAGGCAGCAGCAGAGGTA 59.015 61.111 2.65 0.00 44.61 3.08
646 662 4.719106 GCAGGCAGCAGCAGAGGT 62.719 66.667 2.65 0.00 44.61 3.85
659 675 2.202987 GGCGATCTCCAGTGCAGG 60.203 66.667 0.00 0.00 0.00 4.85
666 682 1.152756 TCTCGGATGGCGATCTCCA 60.153 57.895 6.94 6.94 40.97 3.86
679 695 3.123804 CGTGGATATTGAAACCTCTCGG 58.876 50.000 0.00 0.00 0.00 4.63
695 711 9.554395 TTATTTATTTTGATATGAGAGCGTGGA 57.446 29.630 0.00 0.00 0.00 4.02
730 746 3.823330 CGGCCGGCTACGAAGAGT 61.823 66.667 28.56 0.00 44.60 3.24
808 824 1.072391 CGTGCGGCATTACAGTACAA 58.928 50.000 5.72 0.00 0.00 2.41
809 825 1.355796 GCGTGCGGCATTACAGTACA 61.356 55.000 5.72 0.00 42.87 2.90
810 826 1.347221 GCGTGCGGCATTACAGTAC 59.653 57.895 5.72 0.00 42.87 2.73
811 827 1.812093 GGCGTGCGGCATTACAGTA 60.812 57.895 5.72 0.00 46.16 2.74
812 828 3.124921 GGCGTGCGGCATTACAGT 61.125 61.111 5.72 0.00 46.16 3.55
813 829 3.124270 TGGCGTGCGGCATTACAG 61.124 61.111 16.59 0.00 45.85 2.74
891 915 4.741837 GCCATCCTGATCCCGTATCATATG 60.742 50.000 0.00 0.00 43.70 1.78
923 952 0.708918 GCGAGAGACGGTTTTTCGAG 59.291 55.000 14.44 0.61 42.83 4.04
927 956 1.804748 GGAATGCGAGAGACGGTTTTT 59.195 47.619 0.00 0.00 42.83 1.94
995 1024 2.308039 GGCGCGCTTTATACCGGAG 61.308 63.158 32.29 0.00 0.00 4.63
1042 1071 2.075426 GAGTTGTGGGTTGTGGCTGC 62.075 60.000 0.00 0.00 0.00 5.25
1059 1090 2.159734 GCAACGAGAATCAAGCAGTGAG 60.160 50.000 0.00 0.00 40.43 3.51
1068 1099 2.098607 CCCTACTACGCAACGAGAATCA 59.901 50.000 0.00 0.00 33.17 2.57
1149 1185 3.417101 ACCGATGCACAACCTTAATTCA 58.583 40.909 0.00 0.00 0.00 2.57
1171 1207 2.093500 CACCCATCTTCGATCAACCTCA 60.093 50.000 0.00 0.00 0.00 3.86
1184 1220 0.833287 CGGAATCAGGTCACCCATCT 59.167 55.000 0.00 0.00 0.00 2.90
1406 1442 3.838795 CGGACGCAGCGTACTTGC 61.839 66.667 27.35 11.69 41.37 4.01
1545 1581 1.515020 CTTCCTCCTCTCGCCACAG 59.485 63.158 0.00 0.00 0.00 3.66
1702 1738 1.370064 CGAACACCCTTCTTCCGGT 59.630 57.895 0.00 0.00 0.00 5.28
1708 1744 2.342648 GGCGACGAACACCCTTCT 59.657 61.111 0.00 0.00 0.00 2.85
1731 1767 0.454620 CGTTCTTCTCCTCGTCGTGG 60.455 60.000 7.02 7.02 0.00 4.94
1963 1999 1.684734 ACGCCCCCTCGTTGACTAT 60.685 57.895 0.00 0.00 40.07 2.12
1965 2001 4.003788 CACGCCCCCTCGTTGACT 62.004 66.667 0.00 0.00 41.21 3.41
2122 2158 3.861797 GTCCCCGATGGCCACGAT 61.862 66.667 23.58 3.03 0.00 3.73
2201 2237 0.178990 GTTGGTTCCAGCCTCCTTGT 60.179 55.000 0.00 0.00 0.00 3.16
2353 2389 5.571277 GTTGTTTTCTAAACGCCACTAACA 58.429 37.500 0.00 0.00 0.00 2.41
2374 2410 9.213799 TCCGTATGGTTTAAATTTTAGTACGTT 57.786 29.630 0.00 0.00 36.30 3.99
2432 2469 2.398036 GCAACGCGTTGGGTATCG 59.602 61.111 42.59 23.20 40.74 2.92
2440 2477 2.361104 ATCCCATGGCAACGCGTT 60.361 55.556 20.79 20.79 42.51 4.84
2451 2488 6.823689 GTCTAATATATTGCAACCGATCCCAT 59.176 38.462 0.00 0.00 0.00 4.00
2556 2620 5.630121 ACTCAACATTCAAACATGTAGGGA 58.370 37.500 0.00 0.00 36.30 4.20
2558 2622 6.016360 TCCAACTCAACATTCAAACATGTAGG 60.016 38.462 0.00 0.00 36.30 3.18
2559 2623 6.857964 GTCCAACTCAACATTCAAACATGTAG 59.142 38.462 0.00 0.00 36.30 2.74
2621 3772 6.355397 AGCATATTTCTCTTCACATTCACG 57.645 37.500 0.00 0.00 0.00 4.35
2684 3835 8.288208 ACGTGTCTTATATACATCCGACTAAAG 58.712 37.037 0.00 0.00 0.00 1.85
2685 3836 8.158169 ACGTGTCTTATATACATCCGACTAAA 57.842 34.615 0.00 0.00 0.00 1.85
2686 3837 7.734924 ACGTGTCTTATATACATCCGACTAA 57.265 36.000 0.00 0.00 0.00 2.24
2687 3838 7.734924 AACGTGTCTTATATACATCCGACTA 57.265 36.000 0.00 0.00 0.00 2.59
2703 3854 6.252655 GTGAGCAAACAAATTAAAACGTGTCT 59.747 34.615 0.00 0.00 0.00 3.41
2715 3866 7.379529 CGAACTAAAATGAGTGAGCAAACAAAT 59.620 33.333 0.00 0.00 0.00 2.32
2735 3886 9.518906 TGCTTAATCGAAATTACATACGAACTA 57.481 29.630 0.00 0.00 38.22 2.24
2748 3899 8.492673 TTTCTAGTGTGATGCTTAATCGAAAT 57.507 30.769 0.00 0.00 38.22 2.17
2773 3924 7.680730 TGAGGAGTTTGCTATCTAGACTTTTT 58.319 34.615 0.00 0.00 0.00 1.94
2774 3925 7.246171 TGAGGAGTTTGCTATCTAGACTTTT 57.754 36.000 0.00 0.00 0.00 2.27
2775 3926 6.859112 TGAGGAGTTTGCTATCTAGACTTT 57.141 37.500 0.00 0.00 0.00 2.66
2782 3933 4.566426 AGCTTTGAGGAGTTTGCTATCT 57.434 40.909 0.00 0.00 0.00 1.98
2784 3935 4.195416 GCTAGCTTTGAGGAGTTTGCTAT 58.805 43.478 7.70 0.00 33.43 2.97
2837 3988 7.739498 TCGGAGAACTTTGCTATAAACTTTT 57.261 32.000 0.00 0.00 0.00 2.27
2845 3996 7.201652 GCTAAAATCTTCGGAGAACTTTGCTAT 60.202 37.037 12.32 0.00 45.90 2.97
2919 4079 4.746535 TGTTGGACAGAAACAGTGACTA 57.253 40.909 0.00 0.00 32.71 2.59
2944 4108 3.756117 GAGTGATCCTGAAGGTTTTGGT 58.244 45.455 0.00 0.00 36.34 3.67
3008 4172 9.120422 CGCTTTCCGTTTTATAGTTTACAATTT 57.880 29.630 0.00 0.00 0.00 1.82
3011 4175 7.418840 TCGCTTTCCGTTTTATAGTTTACAA 57.581 32.000 0.00 0.00 38.35 2.41
3014 4178 7.887996 TCTTCGCTTTCCGTTTTATAGTTTA 57.112 32.000 0.00 0.00 38.35 2.01
3019 4183 7.747357 GTGATTTTCTTCGCTTTCCGTTTTATA 59.253 33.333 0.00 0.00 38.35 0.98
3024 4188 3.304458 GGTGATTTTCTTCGCTTTCCGTT 60.304 43.478 0.00 0.00 38.35 4.44
3025 4189 2.225727 GGTGATTTTCTTCGCTTTCCGT 59.774 45.455 0.00 0.00 38.35 4.69
3026 4190 2.484264 AGGTGATTTTCTTCGCTTTCCG 59.516 45.455 0.00 0.00 38.61 4.30
3027 4191 4.505313 AAGGTGATTTTCTTCGCTTTCC 57.495 40.909 0.00 0.00 0.00 3.13
3028 4192 6.963805 CAGATAAGGTGATTTTCTTCGCTTTC 59.036 38.462 0.00 0.00 27.88 2.62
3029 4193 6.623767 GCAGATAAGGTGATTTTCTTCGCTTT 60.624 38.462 0.00 0.00 27.88 3.51
3030 4194 5.163713 GCAGATAAGGTGATTTTCTTCGCTT 60.164 40.000 0.00 0.00 27.88 4.68
3031 4195 4.333926 GCAGATAAGGTGATTTTCTTCGCT 59.666 41.667 0.00 0.00 27.88 4.93
3032 4196 4.094887 TGCAGATAAGGTGATTTTCTTCGC 59.905 41.667 0.00 0.00 27.88 4.70
3033 4197 5.801350 TGCAGATAAGGTGATTTTCTTCG 57.199 39.130 0.00 0.00 27.88 3.79
3034 4198 8.992835 AAAATGCAGATAAGGTGATTTTCTTC 57.007 30.769 0.00 0.00 27.88 2.87
3070 4234 0.037697 ACTACAAGTTGCGATGGCGA 60.038 50.000 1.81 0.00 44.10 5.54
3071 4235 0.095245 CACTACAAGTTGCGATGGCG 59.905 55.000 1.81 0.00 44.10 5.69
3072 4236 1.156736 ACACTACAAGTTGCGATGGC 58.843 50.000 1.81 0.00 40.52 4.40
3073 4237 2.344441 CGTACACTACAAGTTGCGATGG 59.656 50.000 1.81 0.00 0.00 3.51
3074 4238 3.239254 TCGTACACTACAAGTTGCGATG 58.761 45.455 1.81 1.07 0.00 3.84
3075 4239 3.564235 TCGTACACTACAAGTTGCGAT 57.436 42.857 1.81 0.00 0.00 4.58
3076 4240 3.352554 TTCGTACACTACAAGTTGCGA 57.647 42.857 1.81 0.00 0.00 5.10
3077 4241 4.149221 TGAATTCGTACACTACAAGTTGCG 59.851 41.667 1.81 0.00 0.00 4.85
3078 4242 5.585500 TGAATTCGTACACTACAAGTTGC 57.415 39.130 1.81 0.00 0.00 4.17
3079 4243 6.183360 GGGATGAATTCGTACACTACAAGTTG 60.183 42.308 12.03 0.00 0.00 3.16
3080 4244 5.873164 GGGATGAATTCGTACACTACAAGTT 59.127 40.000 12.03 0.00 0.00 2.66
3081 4245 5.046878 TGGGATGAATTCGTACACTACAAGT 60.047 40.000 12.03 0.00 0.00 3.16
3082 4246 5.416083 TGGGATGAATTCGTACACTACAAG 58.584 41.667 12.03 0.00 0.00 3.16
3083 4247 5.408880 TGGGATGAATTCGTACACTACAA 57.591 39.130 12.03 0.00 0.00 2.41
3084 4248 5.597806 GATGGGATGAATTCGTACACTACA 58.402 41.667 12.03 0.99 0.00 2.74
3085 4249 4.680110 CGATGGGATGAATTCGTACACTAC 59.320 45.833 12.03 0.00 0.00 2.73
3086 4250 4.581409 TCGATGGGATGAATTCGTACACTA 59.419 41.667 12.03 0.00 33.52 2.74
3087 4251 3.383505 TCGATGGGATGAATTCGTACACT 59.616 43.478 12.03 0.00 33.52 3.55
3088 4252 3.713288 TCGATGGGATGAATTCGTACAC 58.287 45.455 12.03 2.32 33.52 2.90
3089 4253 4.600692 ATCGATGGGATGAATTCGTACA 57.399 40.909 12.03 9.21 32.92 2.90
3104 4268 0.729116 GCCACTGTTGTCCATCGATG 59.271 55.000 18.76 18.76 0.00 3.84
3105 4269 0.740868 CGCCACTGTTGTCCATCGAT 60.741 55.000 0.00 0.00 0.00 3.59
3106 4270 1.374125 CGCCACTGTTGTCCATCGA 60.374 57.895 0.00 0.00 0.00 3.59
3107 4271 2.390599 CCGCCACTGTTGTCCATCG 61.391 63.158 0.00 0.00 0.00 3.84
3108 4272 1.003839 TCCGCCACTGTTGTCCATC 60.004 57.895 0.00 0.00 0.00 3.51
3109 4273 1.003355 CTCCGCCACTGTTGTCCAT 60.003 57.895 0.00 0.00 0.00 3.41
3110 4274 2.425592 CTCCGCCACTGTTGTCCA 59.574 61.111 0.00 0.00 0.00 4.02
3111 4275 2.358737 CCTCCGCCACTGTTGTCC 60.359 66.667 0.00 0.00 0.00 4.02
3112 4276 2.358737 CCCTCCGCCACTGTTGTC 60.359 66.667 0.00 0.00 0.00 3.18
3113 4277 3.953775 CCCCTCCGCCACTGTTGT 61.954 66.667 0.00 0.00 0.00 3.32
3114 4278 3.491598 AACCCCTCCGCCACTGTTG 62.492 63.158 0.00 0.00 0.00 3.33
3115 4279 3.175710 AACCCCTCCGCCACTGTT 61.176 61.111 0.00 0.00 0.00 3.16
3116 4280 3.953775 CAACCCCTCCGCCACTGT 61.954 66.667 0.00 0.00 0.00 3.55
3117 4281 4.722700 CCAACCCCTCCGCCACTG 62.723 72.222 0.00 0.00 0.00 3.66
3121 4285 4.484872 GTAGCCAACCCCTCCGCC 62.485 72.222 0.00 0.00 0.00 6.13
3122 4286 4.832608 CGTAGCCAACCCCTCCGC 62.833 72.222 0.00 0.00 0.00 5.54
3123 4287 3.387947 ACGTAGCCAACCCCTCCG 61.388 66.667 0.00 0.00 0.00 4.63
3124 4288 2.267961 CACGTAGCCAACCCCTCC 59.732 66.667 0.00 0.00 0.00 4.30
3125 4289 2.267961 CCACGTAGCCAACCCCTC 59.732 66.667 0.00 0.00 0.00 4.30
3126 4290 4.029809 GCCACGTAGCCAACCCCT 62.030 66.667 0.00 0.00 0.00 4.79
3127 4291 4.338710 TGCCACGTAGCCAACCCC 62.339 66.667 2.86 0.00 0.00 4.95
3128 4292 2.746277 CTGCCACGTAGCCAACCC 60.746 66.667 2.86 0.00 0.00 4.11
3129 4293 2.746277 CCTGCCACGTAGCCAACC 60.746 66.667 2.86 0.00 0.00 3.77
3130 4294 1.741770 CTCCTGCCACGTAGCCAAC 60.742 63.158 2.86 0.00 0.00 3.77
3131 4295 2.662596 CTCCTGCCACGTAGCCAA 59.337 61.111 2.86 0.00 0.00 4.52
3132 4296 3.390521 CCTCCTGCCACGTAGCCA 61.391 66.667 2.86 0.00 0.00 4.75
3133 4297 3.075005 TCCTCCTGCCACGTAGCC 61.075 66.667 2.86 0.00 0.00 3.93
3134 4298 2.496817 CTCCTCCTGCCACGTAGC 59.503 66.667 0.00 0.00 0.00 3.58
3135 4299 3.082579 GCCTCCTCCTGCCACGTAG 62.083 68.421 0.00 0.00 0.00 3.51
3136 4300 3.075005 GCCTCCTCCTGCCACGTA 61.075 66.667 0.00 0.00 0.00 3.57
3175 4339 2.585247 GTACCCTCGCCATGTCGC 60.585 66.667 0.00 0.00 0.00 5.19
3176 4340 1.717791 TACGTACCCTCGCCATGTCG 61.718 60.000 0.00 0.00 0.00 4.35
3177 4341 0.030369 CTACGTACCCTCGCCATGTC 59.970 60.000 0.00 0.00 0.00 3.06
3178 4342 0.394762 TCTACGTACCCTCGCCATGT 60.395 55.000 0.00 0.00 0.00 3.21
3179 4343 0.030369 GTCTACGTACCCTCGCCATG 59.970 60.000 0.00 0.00 0.00 3.66
3180 4344 1.105759 GGTCTACGTACCCTCGCCAT 61.106 60.000 0.00 0.00 33.02 4.40
3181 4345 1.750399 GGTCTACGTACCCTCGCCA 60.750 63.158 0.00 0.00 33.02 5.69
3182 4346 1.722636 CTGGTCTACGTACCCTCGCC 61.723 65.000 5.06 0.00 38.90 5.54
3183 4347 1.722636 CCTGGTCTACGTACCCTCGC 61.723 65.000 5.06 0.00 38.90 5.03
3184 4348 1.722636 GCCTGGTCTACGTACCCTCG 61.723 65.000 5.06 0.00 38.90 4.63
3185 4349 1.722636 CGCCTGGTCTACGTACCCTC 61.723 65.000 5.06 0.00 38.90 4.30
3186 4350 1.751927 CGCCTGGTCTACGTACCCT 60.752 63.158 5.06 0.00 38.90 4.34
3187 4351 2.803479 CGCCTGGTCTACGTACCC 59.197 66.667 5.06 2.61 38.90 3.69
3188 4352 2.012902 ATGCGCCTGGTCTACGTACC 62.013 60.000 4.18 0.20 40.19 3.34
3189 4353 0.179119 AATGCGCCTGGTCTACGTAC 60.179 55.000 4.18 0.00 0.00 3.67
3190 4354 0.101759 GAATGCGCCTGGTCTACGTA 59.898 55.000 4.18 0.00 0.00 3.57
3191 4355 1.153628 GAATGCGCCTGGTCTACGT 60.154 57.895 4.18 0.00 0.00 3.57
3192 4356 0.460284 AAGAATGCGCCTGGTCTACG 60.460 55.000 4.18 0.00 0.00 3.51
3193 4357 1.134670 AGAAGAATGCGCCTGGTCTAC 60.135 52.381 4.18 0.00 0.00 2.59
3194 4358 1.195115 AGAAGAATGCGCCTGGTCTA 58.805 50.000 4.18 0.00 0.00 2.59
3195 4359 0.326264 AAGAAGAATGCGCCTGGTCT 59.674 50.000 4.18 0.00 0.00 3.85
3196 4360 1.168714 AAAGAAGAATGCGCCTGGTC 58.831 50.000 4.18 0.00 0.00 4.02
3197 4361 1.620822 AAAAGAAGAATGCGCCTGGT 58.379 45.000 4.18 0.00 0.00 4.00
3198 4362 2.229784 AGAAAAAGAAGAATGCGCCTGG 59.770 45.455 4.18 0.00 0.00 4.45
3199 4363 3.565905 AGAAAAAGAAGAATGCGCCTG 57.434 42.857 4.18 0.00 0.00 4.85
3200 4364 4.301628 CAAAGAAAAAGAAGAATGCGCCT 58.698 39.130 4.18 0.00 0.00 5.52
3201 4365 3.120889 GCAAAGAAAAAGAAGAATGCGCC 60.121 43.478 4.18 0.00 0.00 6.53
3202 4366 3.420927 CGCAAAGAAAAAGAAGAATGCGC 60.421 43.478 0.00 0.00 46.81 6.09
3204 4368 5.219914 CGATCGCAAAGAAAAAGAAGAATGC 60.220 40.000 0.26 0.00 0.00 3.56
3205 4369 5.853282 ACGATCGCAAAGAAAAAGAAGAATG 59.147 36.000 16.60 0.00 0.00 2.67
3206 4370 6.002062 ACGATCGCAAAGAAAAAGAAGAAT 57.998 33.333 16.60 0.00 0.00 2.40
3207 4371 5.418310 ACGATCGCAAAGAAAAAGAAGAA 57.582 34.783 16.60 0.00 0.00 2.52
3208 4372 4.376008 CGACGATCGCAAAGAAAAAGAAGA 60.376 41.667 16.60 0.00 31.14 2.87
3209 4373 3.835250 CGACGATCGCAAAGAAAAAGAAG 59.165 43.478 16.60 0.00 31.14 2.85
3210 4374 3.794536 CGACGATCGCAAAGAAAAAGAA 58.205 40.909 16.60 0.00 31.14 2.52
3211 4375 3.433709 CGACGATCGCAAAGAAAAAGA 57.566 42.857 16.60 0.00 31.14 2.52
3223 4387 1.001745 TGTCAACACAGCGACGATCG 61.002 55.000 14.88 14.88 43.89 3.69
3224 4388 0.710567 CTGTCAACACAGCGACGATC 59.289 55.000 0.00 0.00 43.77 3.69
3225 4389 2.814410 CTGTCAACACAGCGACGAT 58.186 52.632 0.00 0.00 43.77 3.73
3226 4390 4.319249 CTGTCAACACAGCGACGA 57.681 55.556 0.00 0.00 43.77 4.20
3233 4397 1.034838 AAAAGGCGGCTGTCAACACA 61.035 50.000 14.21 0.00 0.00 3.72
3234 4398 0.317854 GAAAAGGCGGCTGTCAACAC 60.318 55.000 14.21 0.00 0.00 3.32
3235 4399 1.781025 CGAAAAGGCGGCTGTCAACA 61.781 55.000 14.21 0.00 0.00 3.33
3236 4400 1.082104 CGAAAAGGCGGCTGTCAAC 60.082 57.895 14.21 1.39 0.00 3.18
3237 4401 2.258013 CCGAAAAGGCGGCTGTCAA 61.258 57.895 14.21 0.00 45.38 3.18
3238 4402 2.668212 CCGAAAAGGCGGCTGTCA 60.668 61.111 14.21 0.00 45.38 3.58
3252 4416 1.738830 GGAATTGTTCGCCGACCGA 60.739 57.895 0.00 0.00 45.77 4.69
3253 4417 1.296056 AAGGAATTGTTCGCCGACCG 61.296 55.000 0.00 0.00 38.61 4.79
3254 4418 0.879090 AAAGGAATTGTTCGCCGACC 59.121 50.000 0.00 0.00 0.00 4.79
3255 4419 2.287368 ACAAAAGGAATTGTTCGCCGAC 60.287 45.455 0.00 0.00 40.52 4.79
3256 4420 1.950909 ACAAAAGGAATTGTTCGCCGA 59.049 42.857 0.00 0.00 40.52 5.54
3257 4421 2.315901 GACAAAAGGAATTGTTCGCCG 58.684 47.619 0.00 0.00 43.31 6.46
3258 4422 2.315901 CGACAAAAGGAATTGTTCGCC 58.684 47.619 0.00 0.00 43.31 5.54
3259 4423 2.287368 ACCGACAAAAGGAATTGTTCGC 60.287 45.455 0.00 0.00 43.31 4.70
3260 4424 3.551551 GACCGACAAAAGGAATTGTTCG 58.448 45.455 0.00 0.00 43.31 3.95
3261 4425 3.608474 CGGACCGACAAAAGGAATTGTTC 60.608 47.826 8.64 0.00 43.31 3.18
3262 4426 2.292292 CGGACCGACAAAAGGAATTGTT 59.708 45.455 8.64 0.00 43.31 2.83
3263 4427 1.877443 CGGACCGACAAAAGGAATTGT 59.123 47.619 8.64 0.00 45.82 2.71
3264 4428 1.877443 ACGGACCGACAAAAGGAATTG 59.123 47.619 23.38 0.00 36.37 2.32
3265 4429 2.265589 ACGGACCGACAAAAGGAATT 57.734 45.000 23.38 0.00 0.00 2.17
3266 4430 1.877443 CAACGGACCGACAAAAGGAAT 59.123 47.619 23.38 0.00 0.00 3.01
3267 4431 1.301423 CAACGGACCGACAAAAGGAA 58.699 50.000 23.38 0.00 0.00 3.36
3268 4432 1.161563 GCAACGGACCGACAAAAGGA 61.162 55.000 23.38 0.00 0.00 3.36
3269 4433 1.281656 GCAACGGACCGACAAAAGG 59.718 57.895 23.38 2.54 0.00 3.11
3270 4434 0.316689 GTGCAACGGACCGACAAAAG 60.317 55.000 23.38 4.36 0.00 2.27
3271 4435 1.716826 GGTGCAACGGACCGACAAAA 61.717 55.000 23.38 0.00 38.12 2.44
3272 4436 2.181521 GGTGCAACGGACCGACAAA 61.182 57.895 23.38 0.00 38.12 2.83
3273 4437 2.589442 GGTGCAACGGACCGACAA 60.589 61.111 23.38 0.00 38.12 3.18
3274 4438 3.387225 TTGGTGCAACGGACCGACA 62.387 57.895 23.38 12.79 38.12 4.35
3275 4439 2.589442 TTGGTGCAACGGACCGAC 60.589 61.111 23.38 8.00 38.12 4.79
3276 4440 2.280524 CTTGGTGCAACGGACCGA 60.281 61.111 23.38 0.00 38.12 4.69
3277 4441 3.353836 CCTTGGTGCAACGGACCG 61.354 66.667 13.61 13.61 38.12 4.79
3278 4442 2.203294 ACCTTGGTGCAACGGACC 60.203 61.111 2.33 0.00 38.12 4.46
3279 4443 1.507141 CTGACCTTGGTGCAACGGAC 61.507 60.000 2.33 0.00 38.12 4.79
3280 4444 1.227823 CTGACCTTGGTGCAACGGA 60.228 57.895 2.33 0.00 38.12 4.69
3281 4445 0.250124 TACTGACCTTGGTGCAACGG 60.250 55.000 0.00 0.00 38.12 4.44
3282 4446 1.531149 CTTACTGACCTTGGTGCAACG 59.469 52.381 0.00 0.00 38.12 4.10
3283 4447 1.880027 CCTTACTGACCTTGGTGCAAC 59.120 52.381 0.00 0.00 0.00 4.17
3284 4448 1.493022 ACCTTACTGACCTTGGTGCAA 59.507 47.619 0.00 0.00 0.00 4.08
3285 4449 1.136828 ACCTTACTGACCTTGGTGCA 58.863 50.000 0.00 0.00 0.00 4.57
3286 4450 1.523758 CACCTTACTGACCTTGGTGC 58.476 55.000 0.00 0.00 41.09 5.01
3287 4451 1.420138 ACCACCTTACTGACCTTGGTG 59.580 52.381 0.00 0.00 45.42 4.17
3288 4452 1.697982 GACCACCTTACTGACCTTGGT 59.302 52.381 0.00 0.00 40.10 3.67
3289 4453 1.337823 CGACCACCTTACTGACCTTGG 60.338 57.143 0.00 0.00 0.00 3.61
3290 4454 1.343465 ACGACCACCTTACTGACCTTG 59.657 52.381 0.00 0.00 0.00 3.61
3291 4455 1.343465 CACGACCACCTTACTGACCTT 59.657 52.381 0.00 0.00 0.00 3.50
3292 4456 0.966920 CACGACCACCTTACTGACCT 59.033 55.000 0.00 0.00 0.00 3.85
3293 4457 0.669625 GCACGACCACCTTACTGACC 60.670 60.000 0.00 0.00 0.00 4.02
3294 4458 0.669625 GGCACGACCACCTTACTGAC 60.670 60.000 0.00 0.00 38.86 3.51
3295 4459 0.830444 AGGCACGACCACCTTACTGA 60.830 55.000 0.00 0.00 43.14 3.41
3296 4460 0.670546 CAGGCACGACCACCTTACTG 60.671 60.000 0.00 0.00 43.14 2.74
3297 4461 0.830444 TCAGGCACGACCACCTTACT 60.830 55.000 0.00 0.00 43.14 2.24
3298 4462 0.389948 CTCAGGCACGACCACCTTAC 60.390 60.000 0.00 0.00 43.14 2.34
3299 4463 1.541310 CCTCAGGCACGACCACCTTA 61.541 60.000 0.00 0.00 43.14 2.69
3300 4464 2.743718 CTCAGGCACGACCACCTT 59.256 61.111 0.00 0.00 43.14 3.50
3301 4465 3.314331 CCTCAGGCACGACCACCT 61.314 66.667 0.00 0.00 43.14 4.00
3302 4466 4.394712 CCCTCAGGCACGACCACC 62.395 72.222 0.00 0.00 43.14 4.61
3303 4467 3.591254 GACCCTCAGGCACGACCAC 62.591 68.421 0.00 0.00 43.14 4.16
3304 4468 3.311110 GACCCTCAGGCACGACCA 61.311 66.667 0.00 0.00 43.14 4.02
3305 4469 2.997897 AGACCCTCAGGCACGACC 60.998 66.667 0.00 0.00 36.11 4.79
3306 4470 2.262915 CAGACCCTCAGGCACGAC 59.737 66.667 0.00 0.00 36.11 4.34
3307 4471 2.203640 ACAGACCCTCAGGCACGA 60.204 61.111 0.00 0.00 36.11 4.35
3308 4472 2.262915 GACAGACCCTCAGGCACG 59.737 66.667 0.00 0.00 36.11 5.34
3309 4473 2.100879 AACGACAGACCCTCAGGCAC 62.101 60.000 0.00 0.00 36.11 5.01
3310 4474 1.837051 AACGACAGACCCTCAGGCA 60.837 57.895 0.00 0.00 36.11 4.75
3311 4475 1.374758 CAACGACAGACCCTCAGGC 60.375 63.158 0.00 0.00 36.11 4.85
3312 4476 0.038159 GTCAACGACAGACCCTCAGG 60.038 60.000 0.00 0.00 33.87 3.86
3313 4477 0.387367 CGTCAACGACAGACCCTCAG 60.387 60.000 0.00 0.00 43.02 3.35
3314 4478 1.658114 CGTCAACGACAGACCCTCA 59.342 57.895 0.00 0.00 43.02 3.86
3315 4479 1.733399 GCGTCAACGACAGACCCTC 60.733 63.158 6.75 0.00 43.02 4.30
3316 4480 1.745320 AAGCGTCAACGACAGACCCT 61.745 55.000 6.75 0.00 43.02 4.34
3317 4481 0.878961 AAAGCGTCAACGACAGACCC 60.879 55.000 6.75 0.00 43.02 4.46
3318 4482 0.232303 CAAAGCGTCAACGACAGACC 59.768 55.000 6.75 0.00 43.02 3.85
3319 4483 0.383124 GCAAAGCGTCAACGACAGAC 60.383 55.000 6.75 0.00 43.02 3.51
3320 4484 0.529773 AGCAAAGCGTCAACGACAGA 60.530 50.000 6.75 0.00 43.02 3.41
3321 4485 0.383491 CAGCAAAGCGTCAACGACAG 60.383 55.000 6.75 0.00 43.02 3.51
3322 4486 1.641140 CAGCAAAGCGTCAACGACA 59.359 52.632 6.75 0.00 43.02 4.35
3323 4487 1.722507 GCAGCAAAGCGTCAACGAC 60.723 57.895 6.75 0.00 43.02 4.34
3324 4488 2.631428 GCAGCAAAGCGTCAACGA 59.369 55.556 6.75 0.00 43.02 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.