Multiple sequence alignment - TraesCS6A01G175200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G175200 chr6A 100.000 4419 0 0 1 4419 190600801 190596383 0.000000e+00 8161.0
1 TraesCS6A01G175200 chr6B 91.289 2032 105 41 1 1982 276738845 276740854 0.000000e+00 2706.0
2 TraesCS6A01G175200 chr6B 94.549 1761 58 11 2085 3837 276740852 276742582 0.000000e+00 2686.0
3 TraesCS6A01G175200 chr6D 90.161 1799 82 36 1 1726 152262650 152264426 0.000000e+00 2254.0
4 TraesCS6A01G175200 chr6D 94.528 1462 48 9 2388 3839 152265401 152266840 0.000000e+00 2228.0
5 TraesCS6A01G175200 chr6D 95.596 386 16 1 4035 4419 32295413 32295028 6.280000e-173 617.0
6 TraesCS6A01G175200 chr6D 94.792 384 19 1 4037 4419 454611190 454610807 8.180000e-167 597.0
7 TraesCS6A01G175200 chr6D 94.560 386 19 2 4035 4419 4391141 4391525 2.940000e-166 595.0
8 TraesCS6A01G175200 chr6D 93.333 270 17 1 2087 2356 152265147 152265415 8.910000e-107 398.0
9 TraesCS6A01G175200 chr6D 94.495 218 8 2 1765 1979 152264927 152265143 2.550000e-87 333.0
10 TraesCS6A01G175200 chr6D 82.927 205 9 7 3839 4036 152266989 152267174 1.270000e-35 161.0
11 TraesCS6A01G175200 chr4A 95.574 723 31 1 2388 3109 642773902 642773180 0.000000e+00 1157.0
12 TraesCS6A01G175200 chr4A 92.963 270 17 2 2087 2356 642774155 642773888 4.140000e-105 392.0
13 TraesCS6A01G175200 chr4A 96.250 240 8 1 1740 1979 642774397 642774159 4.140000e-105 392.0
14 TraesCS6A01G175200 chr4A 95.082 122 3 2 1980 2099 557549793 557549913 5.830000e-44 189.0
15 TraesCS6A01G175200 chr4A 93.478 46 2 1 1737 1782 642774430 642774386 2.850000e-07 67.6
16 TraesCS6A01G175200 chr3B 95.775 639 26 1 2388 3025 14726293 14726931 0.000000e+00 1029.0
17 TraesCS6A01G175200 chr3B 96.250 240 8 1 1740 1979 14725797 14726035 4.140000e-105 392.0
18 TraesCS6A01G175200 chr3B 92.222 270 20 1 2087 2356 14726039 14726307 8.970000e-102 381.0
19 TraesCS6A01G175200 chr3B 93.478 46 2 1 1737 1782 14725764 14725808 2.850000e-07 67.6
20 TraesCS6A01G175200 chr3D 95.325 385 16 2 4036 4419 498871603 498871220 1.050000e-170 610.0
21 TraesCS6A01G175200 chr3D 96.825 63 2 0 1181 1243 90369683 90369745 6.040000e-19 106.0
22 TraesCS6A01G175200 chr7A 95.090 387 18 1 4034 4419 693800703 693801089 3.780000e-170 608.0
23 TraesCS6A01G175200 chr7A 100.000 110 0 0 1977 2086 645027111 645027220 2.080000e-48 204.0
24 TraesCS6A01G175200 chr7A 96.552 116 4 0 1972 2087 82179762 82179647 4.510000e-45 193.0
25 TraesCS6A01G175200 chr4B 94.805 385 19 1 4036 4419 458320520 458320904 2.270000e-167 599.0
26 TraesCS6A01G175200 chr7D 94.819 386 15 3 4035 4419 589883783 589883402 8.180000e-167 597.0
27 TraesCS6A01G175200 chr5D 94.560 386 20 1 4035 4419 370729777 370729392 2.940000e-166 595.0
28 TraesCS6A01G175200 chr5D 95.763 118 5 0 1969 2086 29168321 29168204 1.620000e-44 191.0
29 TraesCS6A01G175200 chr4D 92.840 405 21 7 4018 4419 436878064 436878463 8.240000e-162 580.0
30 TraesCS6A01G175200 chr5A 94.574 129 6 1 1970 2098 16500071 16499944 9.690000e-47 198.0
31 TraesCS6A01G175200 chr3A 98.230 113 2 0 1976 2088 648549021 648548909 9.690000e-47 198.0
32 TraesCS6A01G175200 chr3A 96.825 63 2 0 1181 1243 106657718 106657780 6.040000e-19 106.0
33 TraesCS6A01G175200 chr1B 98.230 113 2 0 1974 2086 687253937 687254049 9.690000e-47 198.0
34 TraesCS6A01G175200 chr1B 93.651 63 4 0 1181 1243 172387999 172387937 1.310000e-15 95.3
35 TraesCS6A01G175200 chr2A 95.082 122 4 2 1978 2098 468295300 468295420 1.620000e-44 191.0
36 TraesCS6A01G175200 chr5B 91.791 134 9 2 1970 2102 666201983 666202115 7.550000e-43 185.0
37 TraesCS6A01G175200 chr1D 85.870 92 11 2 1154 1243 112771715 112771624 3.640000e-16 97.1
38 TraesCS6A01G175200 chr1A 93.651 63 4 0 1181 1243 120012480 120012418 1.310000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G175200 chr6A 190596383 190600801 4418 True 8161.00 8161 100.00000 1 4419 1 chr6A.!!$R1 4418
1 TraesCS6A01G175200 chr6B 276738845 276742582 3737 False 2696.00 2706 92.91900 1 3837 2 chr6B.!!$F1 3836
2 TraesCS6A01G175200 chr6D 152262650 152267174 4524 False 1074.80 2254 91.08880 1 4036 5 chr6D.!!$F2 4035
3 TraesCS6A01G175200 chr4A 642773180 642774430 1250 True 502.15 1157 94.56625 1737 3109 4 chr4A.!!$R1 1372
4 TraesCS6A01G175200 chr3B 14725764 14726931 1167 False 467.40 1029 94.43125 1737 3025 4 chr3B.!!$F1 1288

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
375 409 0.326264 GATGCCCTCCACTCACAACT 59.674 55.0 0.0 0.0 0.00 3.16 F
1280 1358 0.453793 ACGAGTGGATGAGAGAAGCG 59.546 55.0 0.0 0.0 0.00 4.68 F
1884 2430 0.764890 CTCACCTGGTTGTGGGAAGA 59.235 55.0 0.0 0.0 39.14 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2072 2618 0.179081 GCATGGTACTCCCTCCGTTC 60.179 60.0 0.00 0.0 0.0 3.95 R
2330 2876 2.842645 TTAGTACTCCCTCCACCTCC 57.157 55.0 0.00 0.0 0.0 4.30 R
3860 4565 0.038801 CAGACAGCTTCGACTGCTCA 60.039 55.0 8.91 0.0 41.6 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 6.754675 CCCAAAAATAAATAAAGTACGCCCAG 59.245 38.462 0.00 0.00 0.00 4.45
88 89 4.699257 GCCCATTGGATTTGCTAGATCTAG 59.301 45.833 23.20 23.20 36.29 2.43
262 287 4.136796 ACATCCATTCCGAACATATGTGG 58.863 43.478 9.63 7.52 0.00 4.17
301 326 3.975035 GTCCGTTTTGCAAAGACAGAATC 59.025 43.478 19.59 4.79 0.00 2.52
302 327 2.973224 CCGTTTTGCAAAGACAGAATCG 59.027 45.455 12.41 8.11 0.00 3.34
344 378 6.295249 TGATCAACAACTACATTTCCACTGA 58.705 36.000 0.00 0.00 0.00 3.41
346 380 7.448161 TGATCAACAACTACATTTCCACTGATT 59.552 33.333 0.00 0.00 0.00 2.57
351 385 9.520515 AACAACTACATTTCCACTGATTCTAAT 57.479 29.630 0.00 0.00 0.00 1.73
366 400 7.459125 ACTGATTCTAATATAAGATGCCCTCCA 59.541 37.037 0.00 0.00 0.00 3.86
375 409 0.326264 GATGCCCTCCACTCACAACT 59.674 55.000 0.00 0.00 0.00 3.16
381 415 2.303022 CCCTCCACTCACAACTACATGT 59.697 50.000 2.69 2.69 0.00 3.21
384 418 4.262635 CCTCCACTCACAACTACATGTTCT 60.263 45.833 2.30 0.00 36.63 3.01
481 542 1.376037 CCCGACTTGGACTTGCCTC 60.376 63.158 0.00 0.00 42.00 4.70
511 574 2.352323 CCCGGGCTTCATTTTACAACAC 60.352 50.000 8.08 0.00 0.00 3.32
567 634 1.470996 ATTTTCGGCCAGGCTTGCAA 61.471 50.000 12.43 0.00 0.00 4.08
625 692 2.034124 AGGCTTCAAGCTGCTTTTCAA 58.966 42.857 13.10 5.19 41.99 2.69
641 708 1.571955 TCAAGCAGGGCTCAGACATA 58.428 50.000 0.00 0.00 38.25 2.29
643 710 2.305635 TCAAGCAGGGCTCAGACATAAA 59.694 45.455 0.00 0.00 38.25 1.40
669 736 2.562296 AGCTATCTTTGGTCTTGGGGA 58.438 47.619 0.00 0.00 0.00 4.81
674 741 0.478507 CTTTGGTCTTGGGGACAGGT 59.521 55.000 0.00 0.00 46.16 4.00
695 762 8.044908 ACAGGTTTAGTCTTCTAGTTTCACAAA 58.955 33.333 0.00 0.00 0.00 2.83
757 824 9.406828 GAAGTTTGCGTGTGATAGTATATATGA 57.593 33.333 0.00 0.00 0.00 2.15
814 881 6.284475 GCAACACAAAATGCAATGTTAAGA 57.716 33.333 0.00 0.00 42.12 2.10
823 890 6.610075 AATGCAATGTTAAGATGGGAAACT 57.390 33.333 0.00 0.00 0.00 2.66
835 902 1.270625 TGGGAAACTTCAGAATCGCGT 60.271 47.619 5.77 0.00 0.00 6.01
870 937 2.678336 GGGGAAAATCTAGCTGAACACG 59.322 50.000 0.00 0.00 0.00 4.49
879 946 4.744570 TCTAGCTGAACACGGTCTATTTG 58.255 43.478 0.00 0.00 0.00 2.32
1280 1358 0.453793 ACGAGTGGATGAGAGAAGCG 59.546 55.000 0.00 0.00 0.00 4.68
1328 1407 2.890945 GTTTTAGGGGCACATCTGTTGT 59.109 45.455 0.00 0.00 39.91 3.32
1417 1497 4.436332 GAGTGATTTGATTGGATTTGGGC 58.564 43.478 0.00 0.00 0.00 5.36
1467 1547 7.254852 TCAACAAGACTAATTTGGTTTGTGAC 58.745 34.615 10.32 0.00 0.00 3.67
1632 1712 5.703978 TGCATAGGCGCATATAAATGTTT 57.296 34.783 15.02 0.00 45.35 2.83
1639 1719 4.917415 GGCGCATATAAATGTTTGATGACC 59.083 41.667 10.83 4.13 35.38 4.02
1642 1722 6.144854 CGCATATAAATGTTTGATGACCTGG 58.855 40.000 0.00 0.00 35.38 4.45
1726 1806 4.523943 TGAGGTTGTTGCAGCTCATTTAAT 59.476 37.500 1.17 0.00 44.51 1.40
1777 2319 6.209391 ACATAGTTCTTGCTTGCCTACAATTT 59.791 34.615 0.00 0.00 34.61 1.82
1884 2430 0.764890 CTCACCTGGTTGTGGGAAGA 59.235 55.000 0.00 0.00 39.14 2.87
1959 2505 4.086706 TCTGGGAAGTTCTCAAAAGACC 57.913 45.455 6.93 0.00 0.00 3.85
1962 2508 3.202151 TGGGAAGTTCTCAAAAGACCAGT 59.798 43.478 1.96 0.00 0.00 4.00
1979 2525 7.784470 AGACCAGTCTCAAGAATAAAGTACT 57.216 36.000 0.00 0.00 34.17 2.73
1980 2526 8.880991 AGACCAGTCTCAAGAATAAAGTACTA 57.119 34.615 0.00 0.00 34.17 1.82
1981 2527 8.741841 AGACCAGTCTCAAGAATAAAGTACTAC 58.258 37.037 0.00 0.00 34.17 2.73
1982 2528 8.653036 ACCAGTCTCAAGAATAAAGTACTACT 57.347 34.615 0.00 0.00 0.00 2.57
1983 2529 8.741841 ACCAGTCTCAAGAATAAAGTACTACTC 58.258 37.037 0.00 0.00 0.00 2.59
1984 2530 8.192110 CCAGTCTCAAGAATAAAGTACTACTCC 58.808 40.741 0.00 0.00 0.00 3.85
1985 2531 8.192110 CAGTCTCAAGAATAAAGTACTACTCCC 58.808 40.741 0.00 0.00 0.00 4.30
1986 2532 8.117312 AGTCTCAAGAATAAAGTACTACTCCCT 58.883 37.037 0.00 0.00 0.00 4.20
1987 2533 8.407832 GTCTCAAGAATAAAGTACTACTCCCTC 58.592 40.741 0.00 0.00 0.00 4.30
1988 2534 7.560626 TCTCAAGAATAAAGTACTACTCCCTCC 59.439 40.741 0.00 0.00 0.00 4.30
1989 2535 6.320672 TCAAGAATAAAGTACTACTCCCTCCG 59.679 42.308 0.00 0.00 0.00 4.63
1990 2536 5.764432 AGAATAAAGTACTACTCCCTCCGT 58.236 41.667 0.00 0.00 0.00 4.69
1991 2537 6.193504 AGAATAAAGTACTACTCCCTCCGTT 58.806 40.000 0.00 0.00 0.00 4.44
1992 2538 6.320926 AGAATAAAGTACTACTCCCTCCGTTC 59.679 42.308 0.00 0.00 0.00 3.95
1993 2539 3.735720 AAGTACTACTCCCTCCGTTCT 57.264 47.619 0.00 0.00 0.00 3.01
1994 2540 4.851639 AAGTACTACTCCCTCCGTTCTA 57.148 45.455 0.00 0.00 0.00 2.10
1995 2541 4.851639 AGTACTACTCCCTCCGTTCTAA 57.148 45.455 0.00 0.00 0.00 2.10
1996 2542 5.184892 AGTACTACTCCCTCCGTTCTAAA 57.815 43.478 0.00 0.00 0.00 1.85
1997 2543 5.764432 AGTACTACTCCCTCCGTTCTAAAT 58.236 41.667 0.00 0.00 0.00 1.40
1998 2544 6.193504 AGTACTACTCCCTCCGTTCTAAATT 58.806 40.000 0.00 0.00 0.00 1.82
1999 2545 7.349598 AGTACTACTCCCTCCGTTCTAAATTA 58.650 38.462 0.00 0.00 0.00 1.40
2000 2546 6.462552 ACTACTCCCTCCGTTCTAAATTAC 57.537 41.667 0.00 0.00 0.00 1.89
2001 2547 6.193504 ACTACTCCCTCCGTTCTAAATTACT 58.806 40.000 0.00 0.00 0.00 2.24
2002 2548 5.595257 ACTCCCTCCGTTCTAAATTACTC 57.405 43.478 0.00 0.00 0.00 2.59
2003 2549 4.097589 ACTCCCTCCGTTCTAAATTACTCG 59.902 45.833 0.00 0.00 0.00 4.18
2004 2550 4.019174 TCCCTCCGTTCTAAATTACTCGT 58.981 43.478 0.00 0.00 0.00 4.18
2005 2551 4.096984 TCCCTCCGTTCTAAATTACTCGTC 59.903 45.833 0.00 0.00 0.00 4.20
2006 2552 4.033684 CCTCCGTTCTAAATTACTCGTCG 58.966 47.826 0.00 0.00 0.00 5.12
2007 2553 3.429085 TCCGTTCTAAATTACTCGTCGC 58.571 45.455 0.00 0.00 0.00 5.19
2008 2554 3.119884 TCCGTTCTAAATTACTCGTCGCA 60.120 43.478 0.00 0.00 0.00 5.10
2009 2555 3.239941 CCGTTCTAAATTACTCGTCGCAG 59.760 47.826 0.00 0.00 0.00 5.18
2010 2556 4.093514 CGTTCTAAATTACTCGTCGCAGA 58.906 43.478 0.00 0.00 0.00 4.26
2011 2557 4.556135 CGTTCTAAATTACTCGTCGCAGAA 59.444 41.667 0.00 0.00 39.69 3.02
2012 2558 5.060077 CGTTCTAAATTACTCGTCGCAGAAA 59.940 40.000 0.00 0.00 39.69 2.52
2013 2559 6.237490 CGTTCTAAATTACTCGTCGCAGAAAT 60.237 38.462 0.00 0.00 39.69 2.17
2014 2560 6.569228 TCTAAATTACTCGTCGCAGAAATG 57.431 37.500 0.00 0.00 39.69 2.32
2015 2561 4.600012 AAATTACTCGTCGCAGAAATGG 57.400 40.909 0.00 0.00 39.69 3.16
2016 2562 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
2017 2563 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
2018 2564 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
2019 2565 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
2020 2566 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
2021 2567 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
2022 2568 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
2023 2569 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
2024 2570 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
2025 2571 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
2026 2572 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
2027 2573 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
2028 2574 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
2029 2575 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
2030 2576 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
2031 2577 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
2032 2578 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
2059 2605 6.625362 ACATCTAGATACATTCATACCTGCG 58.375 40.000 4.54 0.00 0.00 5.18
2060 2606 6.434340 ACATCTAGATACATTCATACCTGCGA 59.566 38.462 4.54 0.00 0.00 5.10
2061 2607 6.255596 TCTAGATACATTCATACCTGCGAC 57.744 41.667 0.00 0.00 0.00 5.19
2062 2608 4.937201 AGATACATTCATACCTGCGACA 57.063 40.909 0.00 0.00 0.00 4.35
2063 2609 5.276461 AGATACATTCATACCTGCGACAA 57.724 39.130 0.00 0.00 0.00 3.18
2064 2610 5.292765 AGATACATTCATACCTGCGACAAG 58.707 41.667 0.00 0.00 0.00 3.16
2065 2611 3.334583 ACATTCATACCTGCGACAAGT 57.665 42.857 0.00 0.00 0.00 3.16
2066 2612 4.465632 ACATTCATACCTGCGACAAGTA 57.534 40.909 0.00 0.00 0.00 2.24
2067 2613 4.827692 ACATTCATACCTGCGACAAGTAA 58.172 39.130 0.00 0.00 0.00 2.24
2068 2614 5.428253 ACATTCATACCTGCGACAAGTAAT 58.572 37.500 0.00 0.00 0.00 1.89
2069 2615 5.880332 ACATTCATACCTGCGACAAGTAATT 59.120 36.000 0.00 0.00 0.00 1.40
2070 2616 6.037172 ACATTCATACCTGCGACAAGTAATTC 59.963 38.462 0.00 0.00 0.00 2.17
2071 2617 4.109766 TCATACCTGCGACAAGTAATTCG 58.890 43.478 0.00 0.00 38.31 3.34
2072 2618 1.722011 ACCTGCGACAAGTAATTCGG 58.278 50.000 0.00 0.00 35.73 4.30
2073 2619 1.274167 ACCTGCGACAAGTAATTCGGA 59.726 47.619 0.00 0.00 35.73 4.55
2074 2620 2.289195 ACCTGCGACAAGTAATTCGGAA 60.289 45.455 0.00 0.00 35.02 4.30
2075 2621 2.093783 CCTGCGACAAGTAATTCGGAAC 59.906 50.000 0.00 0.00 35.02 3.62
2134 2680 6.198639 ACTCCCTCTGTCTCTATTTACATGT 58.801 40.000 2.69 2.69 0.00 3.21
2136 2682 5.299531 TCCCTCTGTCTCTATTTACATGTCG 59.700 44.000 0.00 0.00 0.00 4.35
2170 2716 5.130350 TCTAGGTTCAACTTTGACCTTTGG 58.870 41.667 14.41 8.57 38.62 3.28
2177 2723 4.770010 TCAACTTTGACCTTTGGTTTGACT 59.230 37.500 0.00 0.00 35.25 3.41
2244 2790 7.555639 TTCGTATTAAAAATTTCAAGCGGTG 57.444 32.000 0.00 0.00 0.00 4.94
2259 2805 4.223320 AGCGGTGTAATTTTTGTGACAG 57.777 40.909 0.00 0.00 0.00 3.51
2265 2811 5.220700 GGTGTAATTTTTGTGACAGACGACA 60.221 40.000 0.00 0.00 0.00 4.35
2277 2823 8.317891 TGTGACAGACGACAAACATATTATTT 57.682 30.769 0.00 0.00 0.00 1.40
2330 2876 8.217131 TGAGAAATGATGACCTCATGTAAATG 57.783 34.615 0.00 0.00 44.03 2.32
2414 2960 7.855904 AGTACTAAAAACAGTTTTCATTGCTCG 59.144 33.333 11.77 0.00 38.01 5.03
2420 2966 5.940192 ACAGTTTTCATTGCTCGTTGATA 57.060 34.783 0.00 0.00 0.00 2.15
2428 2974 8.984891 TTTCATTGCTCGTTGATAATCAAATT 57.015 26.923 0.00 0.00 38.22 1.82
2510 3056 6.885952 TCTAGCTCTGGACATGTAATACTC 57.114 41.667 0.00 0.00 0.00 2.59
2512 3058 7.007116 TCTAGCTCTGGACATGTAATACTCAT 58.993 38.462 0.00 0.00 0.00 2.90
2810 3356 2.159627 GCATGACCCTTTGTTACTGTCG 59.840 50.000 0.00 0.00 0.00 4.35
2812 3358 2.040939 TGACCCTTTGTTACTGTCGGA 58.959 47.619 0.00 0.00 0.00 4.55
2960 3507 6.825610 AGAAGAGTGAGTCTTGTTTCTCATT 58.174 36.000 7.36 0.00 46.21 2.57
2979 3526 7.890515 TCTCATTATTCTGCTCGATTATGTCT 58.109 34.615 0.00 0.00 0.00 3.41
3078 3625 0.620700 AACCGCCCTATCCAGAAGGT 60.621 55.000 0.00 0.00 35.89 3.50
3104 3651 3.927142 GGTTAGTGTTCTTCGGATGACAG 59.073 47.826 0.00 0.00 0.00 3.51
3111 3658 0.526211 CTTCGGATGACAGACGGACA 59.474 55.000 2.30 0.00 0.00 4.02
3122 3669 3.225104 ACAGACGGACAGTACTTACCAA 58.775 45.455 13.40 0.00 0.00 3.67
3170 3717 5.069251 CCTTACTCTCATAACCTGTACTGGG 59.931 48.000 21.46 12.77 0.00 4.45
3499 4046 0.879839 GCGTGCATTTTTGGTTGGCT 60.880 50.000 0.00 0.00 0.00 4.75
3516 4063 2.210961 GGCTGTTTCTCCTATTACGCC 58.789 52.381 0.00 0.00 0.00 5.68
3553 4100 0.520404 GTTCAGAGTCACGCGAGGTA 59.480 55.000 15.93 0.00 0.00 3.08
3621 4171 8.053026 AGATCTCTTAGTATAACACACGTTGT 57.947 34.615 0.00 0.00 41.74 3.32
3650 4200 6.999871 TGCAGCTTAGATCATTATTGGATGAA 59.000 34.615 0.00 0.00 39.33 2.57
3651 4201 7.040892 TGCAGCTTAGATCATTATTGGATGAAC 60.041 37.037 0.00 0.00 39.33 3.18
3652 4202 7.040892 GCAGCTTAGATCATTATTGGATGAACA 60.041 37.037 0.00 0.00 39.33 3.18
3653 4203 8.843262 CAGCTTAGATCATTATTGGATGAACAA 58.157 33.333 0.00 0.00 39.33 2.83
3654 4204 9.412460 AGCTTAGATCATTATTGGATGAACAAA 57.588 29.630 0.00 0.00 39.33 2.83
3655 4205 9.674824 GCTTAGATCATTATTGGATGAACAAAG 57.325 33.333 0.00 0.00 39.33 2.77
3658 4208 8.230472 AGATCATTATTGGATGAACAAAGTCC 57.770 34.615 0.00 0.00 39.33 3.85
3659 4209 7.835682 AGATCATTATTGGATGAACAAAGTCCA 59.164 33.333 0.00 0.00 39.33 4.02
3660 4210 7.156876 TCATTATTGGATGAACAAAGTCCAC 57.843 36.000 0.00 0.00 41.48 4.02
3661 4211 6.947733 TCATTATTGGATGAACAAAGTCCACT 59.052 34.615 0.00 0.00 41.48 4.00
3662 4212 7.451255 TCATTATTGGATGAACAAAGTCCACTT 59.549 33.333 0.00 0.00 41.48 3.16
3663 4213 7.595819 TTATTGGATGAACAAAGTCCACTTT 57.404 32.000 0.00 0.00 46.23 2.66
3664 4214 5.930837 TTGGATGAACAAAGTCCACTTTT 57.069 34.783 1.76 0.00 43.07 2.27
3665 4215 5.261209 TGGATGAACAAAGTCCACTTTTG 57.739 39.130 1.76 1.99 43.07 2.44
3666 4216 4.099266 TGGATGAACAAAGTCCACTTTTGG 59.901 41.667 1.76 0.00 43.07 3.28
3712 4262 3.877508 ACTTCTGGTCCTTCAGTTTTTCG 59.122 43.478 0.00 0.00 36.25 3.46
3760 4310 6.139679 TCCCCAGGATTTTGGCTAATATAG 57.860 41.667 0.00 0.00 36.88 1.31
3860 4565 2.413351 CCGTCCGACGATGATGCT 59.587 61.111 22.40 0.00 46.05 3.79
3863 4568 0.932123 CGTCCGACGATGATGCTGAG 60.932 60.000 16.03 0.00 46.05 3.35
3912 4617 1.746615 CAGCATCCCCTTGACGTGG 60.747 63.158 0.00 0.00 0.00 4.94
3931 4636 1.230324 GCTGCCTTGTCTTCTTTCGT 58.770 50.000 0.00 0.00 0.00 3.85
3935 4640 1.398578 GCCTTGTCTTCTTTCGTTCGC 60.399 52.381 0.00 0.00 0.00 4.70
3937 4642 2.348591 CCTTGTCTTCTTTCGTTCGCAC 60.349 50.000 0.00 0.00 0.00 5.34
3947 4652 4.496670 GTTCGCACGATGCCTACT 57.503 55.556 0.00 0.00 41.12 2.57
3948 4653 2.288969 GTTCGCACGATGCCTACTC 58.711 57.895 0.00 0.00 41.12 2.59
3949 4654 1.141019 TTCGCACGATGCCTACTCC 59.859 57.895 0.00 0.00 41.12 3.85
3950 4655 1.320344 TTCGCACGATGCCTACTCCT 61.320 55.000 0.00 0.00 41.12 3.69
3951 4656 1.141881 CGCACGATGCCTACTCCTT 59.858 57.895 0.00 0.00 41.12 3.36
3952 4657 0.460284 CGCACGATGCCTACTCCTTT 60.460 55.000 0.00 0.00 41.12 3.11
3953 4658 1.009829 GCACGATGCCTACTCCTTTG 58.990 55.000 0.00 0.00 37.42 2.77
3954 4659 1.009829 CACGATGCCTACTCCTTTGC 58.990 55.000 0.00 0.00 0.00 3.68
3955 4660 0.905357 ACGATGCCTACTCCTTTGCT 59.095 50.000 0.00 0.00 0.00 3.91
3956 4661 1.134670 ACGATGCCTACTCCTTTGCTC 60.135 52.381 0.00 0.00 0.00 4.26
3973 4678 0.040204 CTCCCCTGATGCCCTTGTTT 59.960 55.000 0.00 0.00 0.00 2.83
3979 4684 2.137523 CTGATGCCCTTGTTTTGTTGC 58.862 47.619 0.00 0.00 0.00 4.17
3996 4701 4.404654 CGGCGCTGCTGGGTTTTC 62.405 66.667 7.64 0.00 0.00 2.29
4003 4708 0.535102 CTGCTGGGTTTTCCTCGTGT 60.535 55.000 0.00 0.00 40.46 4.49
4013 4724 1.884075 TTCCTCGTGTCGGTGGATGG 61.884 60.000 5.92 0.00 32.55 3.51
4038 4749 3.972276 GGCCGCCGTTGCAAGAAA 61.972 61.111 0.00 0.00 37.32 2.52
4039 4750 2.026879 GCCGCCGTTGCAAGAAAA 59.973 55.556 0.00 0.00 37.32 2.29
4040 4751 1.590259 GCCGCCGTTGCAAGAAAAA 60.590 52.632 0.00 0.00 37.32 1.94
4041 4752 1.548132 GCCGCCGTTGCAAGAAAAAG 61.548 55.000 0.00 0.00 37.32 2.27
4042 4753 0.939106 CCGCCGTTGCAAGAAAAAGG 60.939 55.000 0.00 0.00 37.32 3.11
4043 4754 0.939106 CGCCGTTGCAAGAAAAAGGG 60.939 55.000 0.00 0.00 37.32 3.95
4044 4755 0.104120 GCCGTTGCAAGAAAAAGGGT 59.896 50.000 0.00 0.00 37.47 4.34
4045 4756 1.472552 GCCGTTGCAAGAAAAAGGGTT 60.473 47.619 0.00 0.00 37.47 4.11
4046 4757 2.899976 CCGTTGCAAGAAAAAGGGTTT 58.100 42.857 0.00 0.00 0.00 3.27
4047 4758 3.266636 CCGTTGCAAGAAAAAGGGTTTT 58.733 40.909 0.00 0.00 39.70 2.43
4048 4759 6.251475 GCCGTTGCAAGAAAAAGGGTTTTC 62.251 45.833 0.00 4.17 43.72 2.29
4059 4770 3.865071 GGTTTTCCCCCGCTTTGT 58.135 55.556 0.00 0.00 0.00 2.83
4060 4771 3.039452 GGTTTTCCCCCGCTTTGTA 57.961 52.632 0.00 0.00 0.00 2.41
4061 4772 1.552578 GGTTTTCCCCCGCTTTGTAT 58.447 50.000 0.00 0.00 0.00 2.29
4062 4773 1.897133 GGTTTTCCCCCGCTTTGTATT 59.103 47.619 0.00 0.00 0.00 1.89
4063 4774 2.094390 GGTTTTCCCCCGCTTTGTATTC 60.094 50.000 0.00 0.00 0.00 1.75
4064 4775 1.842052 TTTCCCCCGCTTTGTATTCC 58.158 50.000 0.00 0.00 0.00 3.01
4065 4776 0.699399 TTCCCCCGCTTTGTATTCCA 59.301 50.000 0.00 0.00 0.00 3.53
4066 4777 0.699399 TCCCCCGCTTTGTATTCCAA 59.301 50.000 0.00 0.00 0.00 3.53
4067 4778 1.075698 TCCCCCGCTTTGTATTCCAAA 59.924 47.619 0.00 0.00 40.71 3.28
4077 4788 4.329462 TTGTATTCCAAAGCAACCAACC 57.671 40.909 0.00 0.00 0.00 3.77
4078 4789 2.294791 TGTATTCCAAAGCAACCAACCG 59.705 45.455 0.00 0.00 0.00 4.44
4079 4790 1.698506 ATTCCAAAGCAACCAACCGA 58.301 45.000 0.00 0.00 0.00 4.69
4080 4791 1.698506 TTCCAAAGCAACCAACCGAT 58.301 45.000 0.00 0.00 0.00 4.18
4081 4792 2.570415 TCCAAAGCAACCAACCGATA 57.430 45.000 0.00 0.00 0.00 2.92
4082 4793 2.156098 TCCAAAGCAACCAACCGATAC 58.844 47.619 0.00 0.00 0.00 2.24
4083 4794 1.883275 CCAAAGCAACCAACCGATACA 59.117 47.619 0.00 0.00 0.00 2.29
4084 4795 2.491693 CCAAAGCAACCAACCGATACAT 59.508 45.455 0.00 0.00 0.00 2.29
4085 4796 3.427503 CCAAAGCAACCAACCGATACATC 60.428 47.826 0.00 0.00 0.00 3.06
4086 4797 2.779755 AGCAACCAACCGATACATCA 57.220 45.000 0.00 0.00 0.00 3.07
4087 4798 3.066291 AGCAACCAACCGATACATCAA 57.934 42.857 0.00 0.00 0.00 2.57
4088 4799 3.417101 AGCAACCAACCGATACATCAAA 58.583 40.909 0.00 0.00 0.00 2.69
4089 4800 3.440173 AGCAACCAACCGATACATCAAAG 59.560 43.478 0.00 0.00 0.00 2.77
4090 4801 3.427503 GCAACCAACCGATACATCAAAGG 60.428 47.826 0.00 0.00 0.00 3.11
4091 4802 3.992943 ACCAACCGATACATCAAAGGA 57.007 42.857 0.00 0.00 0.00 3.36
4092 4803 4.503714 ACCAACCGATACATCAAAGGAT 57.496 40.909 0.00 0.00 0.00 3.24
4093 4804 5.623956 ACCAACCGATACATCAAAGGATA 57.376 39.130 0.00 0.00 30.87 2.59
4094 4805 5.611374 ACCAACCGATACATCAAAGGATAG 58.389 41.667 0.00 0.00 30.87 2.08
4095 4806 4.997395 CCAACCGATACATCAAAGGATAGG 59.003 45.833 0.00 0.00 30.87 2.57
4096 4807 5.454755 CCAACCGATACATCAAAGGATAGGT 60.455 44.000 0.00 0.00 30.87 3.08
4097 4808 5.215252 ACCGATACATCAAAGGATAGGTG 57.785 43.478 0.00 0.00 30.87 4.00
4098 4809 3.997021 CCGATACATCAAAGGATAGGTGC 59.003 47.826 0.00 0.00 30.87 5.01
4099 4810 4.262635 CCGATACATCAAAGGATAGGTGCT 60.263 45.833 0.00 0.00 30.87 4.40
4100 4811 4.687948 CGATACATCAAAGGATAGGTGCTG 59.312 45.833 0.00 0.00 30.87 4.41
4101 4812 3.287867 ACATCAAAGGATAGGTGCTGG 57.712 47.619 0.00 0.00 30.87 4.85
4102 4813 2.092212 ACATCAAAGGATAGGTGCTGGG 60.092 50.000 0.00 0.00 30.87 4.45
4103 4814 0.918983 TCAAAGGATAGGTGCTGGGG 59.081 55.000 0.00 0.00 0.00 4.96
4104 4815 0.753111 CAAAGGATAGGTGCTGGGGC 60.753 60.000 0.00 0.00 39.26 5.80
4105 4816 2.270874 AAAGGATAGGTGCTGGGGCG 62.271 60.000 0.00 0.00 42.25 6.13
4106 4817 3.161450 GGATAGGTGCTGGGGCGA 61.161 66.667 0.00 0.00 42.25 5.54
4107 4818 2.742116 GGATAGGTGCTGGGGCGAA 61.742 63.158 0.00 0.00 42.25 4.70
4108 4819 1.223487 GATAGGTGCTGGGGCGAAA 59.777 57.895 0.00 0.00 42.25 3.46
4109 4820 0.815615 GATAGGTGCTGGGGCGAAAG 60.816 60.000 0.00 0.00 42.25 2.62
4123 4834 1.678360 CGAAAGCAGCACAATCACAC 58.322 50.000 0.00 0.00 0.00 3.82
4124 4835 1.265095 CGAAAGCAGCACAATCACACT 59.735 47.619 0.00 0.00 0.00 3.55
4125 4836 2.480037 CGAAAGCAGCACAATCACACTA 59.520 45.455 0.00 0.00 0.00 2.74
4126 4837 3.058983 CGAAAGCAGCACAATCACACTAA 60.059 43.478 0.00 0.00 0.00 2.24
4127 4838 4.554526 CGAAAGCAGCACAATCACACTAAA 60.555 41.667 0.00 0.00 0.00 1.85
4128 4839 4.916983 AAGCAGCACAATCACACTAAAA 57.083 36.364 0.00 0.00 0.00 1.52
4129 4840 4.494350 AGCAGCACAATCACACTAAAAG 57.506 40.909 0.00 0.00 0.00 2.27
4130 4841 4.136796 AGCAGCACAATCACACTAAAAGA 58.863 39.130 0.00 0.00 0.00 2.52
4131 4842 4.580167 AGCAGCACAATCACACTAAAAGAA 59.420 37.500 0.00 0.00 0.00 2.52
4132 4843 5.067674 AGCAGCACAATCACACTAAAAGAAA 59.932 36.000 0.00 0.00 0.00 2.52
4133 4844 5.173854 GCAGCACAATCACACTAAAAGAAAC 59.826 40.000 0.00 0.00 0.00 2.78
4134 4845 5.396362 CAGCACAATCACACTAAAAGAAACG 59.604 40.000 0.00 0.00 0.00 3.60
4135 4846 5.295787 AGCACAATCACACTAAAAGAAACGA 59.704 36.000 0.00 0.00 0.00 3.85
4136 4847 5.968848 GCACAATCACACTAAAAGAAACGAA 59.031 36.000 0.00 0.00 0.00 3.85
4137 4848 6.470877 GCACAATCACACTAAAAGAAACGAAA 59.529 34.615 0.00 0.00 0.00 3.46
4138 4849 7.305418 GCACAATCACACTAAAAGAAACGAAAG 60.305 37.037 0.00 0.00 0.00 2.62
4139 4850 7.908082 CACAATCACACTAAAAGAAACGAAAGA 59.092 33.333 0.00 0.00 0.00 2.52
4140 4851 8.122952 ACAATCACACTAAAAGAAACGAAAGAG 58.877 33.333 0.00 0.00 0.00 2.85
4141 4852 8.335356 CAATCACACTAAAAGAAACGAAAGAGA 58.665 33.333 0.00 0.00 0.00 3.10
4142 4853 7.837202 TCACACTAAAAGAAACGAAAGAGAA 57.163 32.000 0.00 0.00 0.00 2.87
4143 4854 8.259049 TCACACTAAAAGAAACGAAAGAGAAA 57.741 30.769 0.00 0.00 0.00 2.52
4144 4855 8.173130 TCACACTAAAAGAAACGAAAGAGAAAC 58.827 33.333 0.00 0.00 0.00 2.78
4145 4856 7.960738 CACACTAAAAGAAACGAAAGAGAAACA 59.039 33.333 0.00 0.00 0.00 2.83
4146 4857 8.508875 ACACTAAAAGAAACGAAAGAGAAACAA 58.491 29.630 0.00 0.00 0.00 2.83
4147 4858 8.786028 CACTAAAAGAAACGAAAGAGAAACAAC 58.214 33.333 0.00 0.00 0.00 3.32
4148 4859 8.508875 ACTAAAAGAAACGAAAGAGAAACAACA 58.491 29.630 0.00 0.00 0.00 3.33
4149 4860 9.337091 CTAAAAGAAACGAAAGAGAAACAACAA 57.663 29.630 0.00 0.00 0.00 2.83
4150 4861 7.796958 AAAGAAACGAAAGAGAAACAACAAG 57.203 32.000 0.00 0.00 0.00 3.16
4151 4862 6.737254 AGAAACGAAAGAGAAACAACAAGA 57.263 33.333 0.00 0.00 0.00 3.02
4152 4863 6.776094 AGAAACGAAAGAGAAACAACAAGAG 58.224 36.000 0.00 0.00 0.00 2.85
4153 4864 6.594159 AGAAACGAAAGAGAAACAACAAGAGA 59.406 34.615 0.00 0.00 0.00 3.10
4154 4865 6.737254 AACGAAAGAGAAACAACAAGAGAA 57.263 33.333 0.00 0.00 0.00 2.87
4155 4866 6.737254 ACGAAAGAGAAACAACAAGAGAAA 57.263 33.333 0.00 0.00 0.00 2.52
4156 4867 7.141100 ACGAAAGAGAAACAACAAGAGAAAA 57.859 32.000 0.00 0.00 0.00 2.29
4157 4868 7.244192 ACGAAAGAGAAACAACAAGAGAAAAG 58.756 34.615 0.00 0.00 0.00 2.27
4158 4869 7.119262 ACGAAAGAGAAACAACAAGAGAAAAGA 59.881 33.333 0.00 0.00 0.00 2.52
4159 4870 7.962918 CGAAAGAGAAACAACAAGAGAAAAGAA 59.037 33.333 0.00 0.00 0.00 2.52
4160 4871 9.794685 GAAAGAGAAACAACAAGAGAAAAGAAT 57.205 29.630 0.00 0.00 0.00 2.40
4161 4872 9.578439 AAAGAGAAACAACAAGAGAAAAGAATG 57.422 29.630 0.00 0.00 0.00 2.67
4162 4873 7.199078 AGAGAAACAACAAGAGAAAAGAATGC 58.801 34.615 0.00 0.00 0.00 3.56
4163 4874 6.276091 AGAAACAACAAGAGAAAAGAATGCC 58.724 36.000 0.00 0.00 0.00 4.40
4164 4875 4.228912 ACAACAAGAGAAAAGAATGCCG 57.771 40.909 0.00 0.00 0.00 5.69
4165 4876 3.882888 ACAACAAGAGAAAAGAATGCCGA 59.117 39.130 0.00 0.00 0.00 5.54
4166 4877 4.222114 CAACAAGAGAAAAGAATGCCGAC 58.778 43.478 0.00 0.00 0.00 4.79
4167 4878 3.476552 ACAAGAGAAAAGAATGCCGACA 58.523 40.909 0.00 0.00 0.00 4.35
4168 4879 3.882888 ACAAGAGAAAAGAATGCCGACAA 59.117 39.130 0.00 0.00 0.00 3.18
4169 4880 4.222114 CAAGAGAAAAGAATGCCGACAAC 58.778 43.478 0.00 0.00 0.00 3.32
4170 4881 2.480419 AGAGAAAAGAATGCCGACAACG 59.520 45.455 0.00 0.00 39.43 4.10
4171 4882 2.478894 GAGAAAAGAATGCCGACAACGA 59.521 45.455 0.00 0.00 42.66 3.85
4172 4883 2.223377 AGAAAAGAATGCCGACAACGAC 59.777 45.455 0.00 0.00 42.66 4.34
4173 4884 0.511221 AAAGAATGCCGACAACGACG 59.489 50.000 0.00 0.00 42.66 5.12
4188 4899 3.005823 GACGGATCGACGAAAACGA 57.994 52.632 20.67 0.00 43.65 3.85
4189 4900 1.330306 GACGGATCGACGAAAACGAA 58.670 50.000 20.67 0.00 42.80 3.85
4190 4901 1.316735 GACGGATCGACGAAAACGAAG 59.683 52.381 20.67 4.79 42.80 3.79
4191 4902 1.069022 ACGGATCGACGAAAACGAAGA 60.069 47.619 20.67 0.00 42.80 2.87
4192 4903 1.980844 CGGATCGACGAAAACGAAGAA 59.019 47.619 0.00 0.00 42.80 2.52
4193 4904 2.026507 CGGATCGACGAAAACGAAGAAG 59.973 50.000 0.00 0.00 42.80 2.85
4194 4905 2.222530 GGATCGACGAAAACGAAGAAGC 60.223 50.000 0.00 0.00 42.80 3.86
4195 4906 2.129823 TCGACGAAAACGAAGAAGCT 57.870 45.000 0.00 0.00 36.84 3.74
4196 4907 2.466846 TCGACGAAAACGAAGAAGCTT 58.533 42.857 0.00 0.00 36.84 3.74
4197 4908 2.470257 TCGACGAAAACGAAGAAGCTTC 59.530 45.455 19.11 19.11 36.84 3.86
4198 4909 2.217847 CGACGAAAACGAAGAAGCTTCA 59.782 45.455 27.57 0.00 0.00 3.02
4199 4910 3.532950 GACGAAAACGAAGAAGCTTCAC 58.467 45.455 27.57 18.86 0.00 3.18
4200 4911 2.034001 ACGAAAACGAAGAAGCTTCACG 60.034 45.455 30.04 30.04 36.14 4.35
4201 4912 2.217847 CGAAAACGAAGAAGCTTCACGA 59.782 45.455 34.75 0.00 34.91 4.35
4202 4913 3.532950 GAAAACGAAGAAGCTTCACGAC 58.467 45.455 34.75 23.46 34.91 4.34
4203 4914 1.499049 AACGAAGAAGCTTCACGACC 58.501 50.000 34.75 17.84 34.91 4.79
4204 4915 0.387929 ACGAAGAAGCTTCACGACCA 59.612 50.000 34.75 0.00 34.91 4.02
4205 4916 0.784778 CGAAGAAGCTTCACGACCAC 59.215 55.000 28.93 12.92 33.54 4.16
4206 4917 1.603172 CGAAGAAGCTTCACGACCACT 60.603 52.381 28.93 7.36 33.54 4.00
4207 4918 1.795286 GAAGAAGCTTCACGACCACTG 59.205 52.381 27.57 0.00 0.00 3.66
4208 4919 0.601311 AGAAGCTTCACGACCACTGC 60.601 55.000 27.57 0.00 0.00 4.40
4209 4920 1.891060 GAAGCTTCACGACCACTGCG 61.891 60.000 21.67 0.00 0.00 5.18
4210 4921 4.077188 GCTTCACGACCACTGCGC 62.077 66.667 0.00 0.00 0.00 6.09
4211 4922 3.414700 CTTCACGACCACTGCGCC 61.415 66.667 4.18 0.00 0.00 6.53
4212 4923 4.980805 TTCACGACCACTGCGCCC 62.981 66.667 4.18 0.00 0.00 6.13
4220 4931 4.680237 CACTGCGCCCACCGAAGA 62.680 66.667 4.18 0.00 45.98 2.87
4221 4932 3.706373 ACTGCGCCCACCGAAGAT 61.706 61.111 4.18 0.00 45.98 2.40
4222 4933 2.892425 CTGCGCCCACCGAAGATC 60.892 66.667 4.18 0.00 45.98 2.75
4223 4934 3.376935 CTGCGCCCACCGAAGATCT 62.377 63.158 4.18 0.00 45.98 2.75
4224 4935 2.586357 GCGCCCACCGAAGATCTC 60.586 66.667 0.00 0.00 40.02 2.75
4225 4936 2.107141 CGCCCACCGAAGATCTCC 59.893 66.667 0.00 0.00 40.02 3.71
4226 4937 2.506472 GCCCACCGAAGATCTCCC 59.494 66.667 0.00 0.00 0.00 4.30
4227 4938 2.367202 GCCCACCGAAGATCTCCCA 61.367 63.158 0.00 0.00 0.00 4.37
4228 4939 1.522569 CCCACCGAAGATCTCCCAC 59.477 63.158 0.00 0.00 0.00 4.61
4229 4940 1.141881 CCACCGAAGATCTCCCACG 59.858 63.158 0.00 0.21 0.00 4.94
4230 4941 1.320344 CCACCGAAGATCTCCCACGA 61.320 60.000 0.00 0.00 0.00 4.35
4231 4942 0.530744 CACCGAAGATCTCCCACGAA 59.469 55.000 0.00 0.00 0.00 3.85
4232 4943 0.818296 ACCGAAGATCTCCCACGAAG 59.182 55.000 0.00 0.00 0.00 3.79
4233 4944 0.528684 CCGAAGATCTCCCACGAAGC 60.529 60.000 0.00 0.00 0.00 3.86
4234 4945 0.457851 CGAAGATCTCCCACGAAGCT 59.542 55.000 0.00 0.00 0.00 3.74
4235 4946 1.535015 CGAAGATCTCCCACGAAGCTC 60.535 57.143 0.00 0.00 0.00 4.09
4236 4947 0.827368 AAGATCTCCCACGAAGCTCC 59.173 55.000 0.00 0.00 0.00 4.70
4237 4948 0.324738 AGATCTCCCACGAAGCTCCA 60.325 55.000 0.00 0.00 0.00 3.86
4238 4949 0.537188 GATCTCCCACGAAGCTCCAA 59.463 55.000 0.00 0.00 0.00 3.53
4239 4950 0.539051 ATCTCCCACGAAGCTCCAAG 59.461 55.000 0.00 0.00 0.00 3.61
4240 4951 1.078848 CTCCCACGAAGCTCCAAGG 60.079 63.158 0.00 0.00 0.00 3.61
4241 4952 2.747855 CCCACGAAGCTCCAAGGC 60.748 66.667 0.00 0.00 0.00 4.35
4242 4953 2.348998 CCACGAAGCTCCAAGGCT 59.651 61.111 0.00 0.00 45.30 4.58
4243 4954 1.743252 CCACGAAGCTCCAAGGCTC 60.743 63.158 0.00 0.00 42.24 4.70
4244 4955 1.743252 CACGAAGCTCCAAGGCTCC 60.743 63.158 0.00 0.00 42.24 4.70
4245 4956 2.510238 CGAAGCTCCAAGGCTCCG 60.510 66.667 0.00 0.00 42.24 4.63
4246 4957 2.982130 GAAGCTCCAAGGCTCCGA 59.018 61.111 0.00 0.00 42.24 4.55
4247 4958 1.296715 GAAGCTCCAAGGCTCCGAA 59.703 57.895 0.00 0.00 42.24 4.30
4248 4959 0.742635 GAAGCTCCAAGGCTCCGAAG 60.743 60.000 0.00 0.00 42.24 3.79
4260 4971 2.344500 CCGAAGCACCGGTACCAA 59.656 61.111 6.87 0.00 44.23 3.67
4261 4972 1.078708 CCGAAGCACCGGTACCAAT 60.079 57.895 6.87 0.00 44.23 3.16
4262 4973 1.087771 CCGAAGCACCGGTACCAATC 61.088 60.000 6.87 0.00 44.23 2.67
4263 4974 0.390603 CGAAGCACCGGTACCAATCA 60.391 55.000 6.87 0.00 0.00 2.57
4264 4975 1.816074 GAAGCACCGGTACCAATCAA 58.184 50.000 6.87 0.00 0.00 2.57
4265 4976 1.467342 GAAGCACCGGTACCAATCAAC 59.533 52.381 6.87 0.00 0.00 3.18
4266 4977 0.398696 AGCACCGGTACCAATCAACA 59.601 50.000 6.87 0.00 0.00 3.33
4267 4978 0.519961 GCACCGGTACCAATCAACAC 59.480 55.000 6.87 0.00 0.00 3.32
4268 4979 1.161843 CACCGGTACCAATCAACACC 58.838 55.000 6.87 0.00 0.00 4.16
4269 4980 1.061546 ACCGGTACCAATCAACACCT 58.938 50.000 4.49 0.00 0.00 4.00
4270 4981 1.422402 ACCGGTACCAATCAACACCTT 59.578 47.619 4.49 0.00 0.00 3.50
4271 4982 2.081462 CCGGTACCAATCAACACCTTC 58.919 52.381 13.54 0.00 0.00 3.46
4272 4983 2.551287 CCGGTACCAATCAACACCTTCA 60.551 50.000 13.54 0.00 0.00 3.02
4273 4984 3.142951 CGGTACCAATCAACACCTTCAA 58.857 45.455 13.54 0.00 0.00 2.69
4274 4985 3.188460 CGGTACCAATCAACACCTTCAAG 59.812 47.826 13.54 0.00 0.00 3.02
4275 4986 4.394729 GGTACCAATCAACACCTTCAAGA 58.605 43.478 7.15 0.00 0.00 3.02
4276 4987 4.825085 GGTACCAATCAACACCTTCAAGAA 59.175 41.667 7.15 0.00 0.00 2.52
4277 4988 5.048713 GGTACCAATCAACACCTTCAAGAAG 60.049 44.000 7.15 2.83 38.14 2.85
4285 4996 4.988065 CTTCAAGAAGGACCGCGA 57.012 55.556 8.23 0.00 34.87 5.87
4286 4997 2.446341 CTTCAAGAAGGACCGCGAC 58.554 57.895 8.23 0.17 34.87 5.19
4287 4998 1.344942 CTTCAAGAAGGACCGCGACG 61.345 60.000 8.23 0.00 34.87 5.12
4288 4999 1.798234 TTCAAGAAGGACCGCGACGA 61.798 55.000 8.23 0.00 0.00 4.20
4289 5000 1.372499 CAAGAAGGACCGCGACGAA 60.372 57.895 8.23 0.00 0.00 3.85
4290 5001 1.080705 AAGAAGGACCGCGACGAAG 60.081 57.895 8.23 0.00 0.00 3.79
4291 5002 1.521450 AAGAAGGACCGCGACGAAGA 61.521 55.000 8.23 0.00 0.00 2.87
4292 5003 1.800713 GAAGGACCGCGACGAAGAC 60.801 63.158 8.23 0.00 0.00 3.01
4301 5012 2.126812 GACGAAGACGACGCTGCT 60.127 61.111 0.00 0.00 42.66 4.24
4302 5013 2.429236 ACGAAGACGACGCTGCTG 60.429 61.111 0.00 0.00 42.66 4.41
4303 5014 3.832171 CGAAGACGACGCTGCTGC 61.832 66.667 5.34 5.34 42.66 5.25
4304 5015 3.482783 GAAGACGACGCTGCTGCC 61.483 66.667 10.24 0.00 35.36 4.85
4305 5016 4.299547 AAGACGACGCTGCTGCCA 62.300 61.111 10.24 0.00 35.36 4.92
4306 5017 3.807631 AAGACGACGCTGCTGCCAA 62.808 57.895 10.24 0.00 35.36 4.52
4307 5018 3.782244 GACGACGCTGCTGCCAAG 61.782 66.667 10.24 3.84 35.36 3.61
4311 5022 4.586235 ACGCTGCTGCCAAGGGTT 62.586 61.111 10.24 0.00 35.36 4.11
4312 5023 3.297620 CGCTGCTGCCAAGGGTTT 61.298 61.111 10.24 0.00 35.36 3.27
4313 5024 2.653115 GCTGCTGCCAAGGGTTTC 59.347 61.111 3.85 0.00 0.00 2.78
4314 5025 2.935740 GCTGCTGCCAAGGGTTTCC 61.936 63.158 3.85 0.00 0.00 3.13
4315 5026 2.203625 TGCTGCCAAGGGTTTCCC 60.204 61.111 0.00 0.00 45.90 3.97
4324 5035 4.970621 GGGTTTCCCCCGATACAC 57.029 61.111 0.00 0.00 45.80 2.90
4325 5036 1.153309 GGGTTTCCCCCGATACACG 60.153 63.158 0.00 0.00 45.80 4.49
4326 5037 1.616091 GGGTTTCCCCCGATACACGA 61.616 60.000 0.00 0.00 45.80 4.35
4327 5038 0.460811 GGTTTCCCCCGATACACGAC 60.461 60.000 0.00 0.00 45.77 4.34
4328 5039 0.533951 GTTTCCCCCGATACACGACT 59.466 55.000 0.00 0.00 45.77 4.18
4329 5040 1.750778 GTTTCCCCCGATACACGACTA 59.249 52.381 0.00 0.00 45.77 2.59
4330 5041 1.683943 TTCCCCCGATACACGACTAG 58.316 55.000 0.00 0.00 45.77 2.57
4331 5042 0.179009 TCCCCCGATACACGACTAGG 60.179 60.000 0.00 0.00 45.77 3.02
4332 5043 1.658673 CCCCGATACACGACTAGGC 59.341 63.158 0.00 0.00 45.77 3.93
4333 5044 1.281960 CCCGATACACGACTAGGCG 59.718 63.158 18.57 18.57 45.77 5.52
4334 5045 1.162181 CCCGATACACGACTAGGCGA 61.162 60.000 28.11 1.57 45.77 5.54
4335 5046 0.235144 CCGATACACGACTAGGCGAG 59.765 60.000 28.11 20.85 45.77 5.03
4336 5047 1.215244 CGATACACGACTAGGCGAGA 58.785 55.000 28.11 9.50 45.77 4.04
4337 5048 1.192757 CGATACACGACTAGGCGAGAG 59.807 57.143 28.11 16.27 45.77 3.20
4338 5049 1.532007 GATACACGACTAGGCGAGAGG 59.468 57.143 28.11 13.28 34.83 3.69
4339 5050 0.538584 TACACGACTAGGCGAGAGGA 59.461 55.000 28.11 7.93 34.83 3.71
4340 5051 0.322277 ACACGACTAGGCGAGAGGAA 60.322 55.000 28.11 0.00 34.83 3.36
4341 5052 0.378962 CACGACTAGGCGAGAGGAAG 59.621 60.000 28.11 1.05 34.83 3.46
4342 5053 0.748729 ACGACTAGGCGAGAGGAAGG 60.749 60.000 28.11 0.00 34.83 3.46
4343 5054 1.448922 CGACTAGGCGAGAGGAAGGG 61.449 65.000 14.40 0.00 0.00 3.95
4344 5055 0.396001 GACTAGGCGAGAGGAAGGGT 60.396 60.000 0.28 0.00 0.00 4.34
4345 5056 0.396001 ACTAGGCGAGAGGAAGGGTC 60.396 60.000 0.28 0.00 0.00 4.46
4346 5057 1.448922 CTAGGCGAGAGGAAGGGTCG 61.449 65.000 0.00 0.00 36.77 4.79
4349 5060 3.839432 CGAGAGGAAGGGTCGCCC 61.839 72.222 6.80 6.80 45.90 6.13
4365 5076 4.715130 CCCCGACACCCTCCAGGA 62.715 72.222 0.00 0.00 39.89 3.86
4366 5077 2.606519 CCCGACACCCTCCAGGAA 60.607 66.667 0.00 0.00 39.89 3.36
4367 5078 2.660064 CCCGACACCCTCCAGGAAG 61.660 68.421 0.00 0.00 39.89 3.46
4368 5079 2.660064 CCGACACCCTCCAGGAAGG 61.660 68.421 1.97 1.97 39.89 3.46
4369 5080 1.913762 CGACACCCTCCAGGAAGGT 60.914 63.158 3.51 3.51 39.89 3.50
4370 5081 1.889530 CGACACCCTCCAGGAAGGTC 61.890 65.000 6.79 3.41 39.89 3.85
4371 5082 1.539124 ACACCCTCCAGGAAGGTCC 60.539 63.158 6.79 0.00 39.89 4.46
4372 5083 2.284699 ACCCTCCAGGAAGGTCCG 60.285 66.667 3.51 0.00 42.75 4.79
4373 5084 3.083997 CCCTCCAGGAAGGTCCGG 61.084 72.222 0.00 0.00 42.75 5.14
4374 5085 3.787001 CCTCCAGGAAGGTCCGGC 61.787 72.222 0.00 0.00 42.75 6.13
4375 5086 4.148825 CTCCAGGAAGGTCCGGCG 62.149 72.222 0.00 0.00 42.75 6.46
4413 5124 4.736896 GTCGGTGTCGGACAGGCC 62.737 72.222 11.83 9.32 36.95 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 3.494332 AGATCTAGCAAATCCAATGGGC 58.506 45.455 0.00 0.00 0.00 5.36
262 287 4.313282 ACGGACTGTAGAAACTTTAAGGC 58.687 43.478 0.00 0.00 0.00 4.35
336 363 8.103305 GGGCATCTTATATTAGAATCAGTGGAA 58.897 37.037 0.00 0.00 0.00 3.53
337 364 7.459125 AGGGCATCTTATATTAGAATCAGTGGA 59.541 37.037 0.00 0.00 0.00 4.02
344 378 7.459125 TGAGTGGAGGGCATCTTATATTAGAAT 59.541 37.037 0.00 0.00 0.00 2.40
346 380 6.211584 GTGAGTGGAGGGCATCTTATATTAGA 59.788 42.308 0.00 0.00 0.00 2.10
351 385 3.653164 TGTGAGTGGAGGGCATCTTATA 58.347 45.455 0.00 0.00 0.00 0.98
366 400 4.955811 TGGAGAACATGTAGTTGTGAGT 57.044 40.909 0.00 0.00 41.51 3.41
375 409 4.365514 TCAAAGCCTTGGAGAACATGTA 57.634 40.909 0.00 0.00 33.01 2.29
381 415 2.596346 TGCATTCAAAGCCTTGGAGAA 58.404 42.857 0.00 0.00 33.01 2.87
384 418 4.354893 AAATTGCATTCAAAGCCTTGGA 57.645 36.364 0.00 0.00 35.56 3.53
416 477 7.011950 TCACAAGTCCTTACAAACACACTTATG 59.988 37.037 0.00 0.00 0.00 1.90
419 480 5.250200 TCACAAGTCCTTACAAACACACTT 58.750 37.500 0.00 0.00 0.00 3.16
466 527 3.129792 CGAGAGGCAAGTCCAAGTC 57.870 57.895 0.00 0.00 37.29 3.01
544 611 1.000731 CAAGCCTGGCCGAAAATCAAA 59.999 47.619 16.57 0.00 0.00 2.69
594 661 3.022406 GCTTGAAGCCTGAAATCCTGAT 58.978 45.455 5.74 0.00 34.48 2.90
595 662 2.040813 AGCTTGAAGCCTGAAATCCTGA 59.959 45.455 14.45 0.00 43.77 3.86
625 692 3.439857 TTTTTATGTCTGAGCCCTGCT 57.560 42.857 0.00 0.00 43.88 4.24
643 710 6.381133 CCCCAAGACCAAAGATAGCTATTTTT 59.619 38.462 14.76 14.76 0.00 1.94
666 733 5.741962 AACTAGAAGACTAAACCTGTCCC 57.258 43.478 0.00 0.00 35.21 4.46
669 736 7.120923 TGTGAAACTAGAAGACTAAACCTGT 57.879 36.000 0.00 0.00 38.04 4.00
674 741 6.480981 CGGGTTTGTGAAACTAGAAGACTAAA 59.519 38.462 0.00 0.00 41.14 1.85
811 878 3.691609 GCGATTCTGAAGTTTCCCATCTT 59.308 43.478 0.00 0.00 0.00 2.40
814 881 2.009774 CGCGATTCTGAAGTTTCCCAT 58.990 47.619 0.00 0.00 0.00 4.00
823 890 0.731514 GTGTCGGACGCGATTCTGAA 60.732 55.000 15.93 0.00 32.53 3.02
835 902 0.547075 TTCCCCAGTTTTGTGTCGGA 59.453 50.000 0.00 0.00 0.00 4.55
879 946 0.955919 CCTTCGGTGAACAAGGGCTC 60.956 60.000 0.00 0.00 36.29 4.70
1083 1161 4.100084 TCCATGGCTGCCACCGAG 62.100 66.667 25.99 13.89 35.80 4.63
1088 1166 3.414193 CCTCCTCCATGGCTGCCA 61.414 66.667 25.65 25.65 38.19 4.92
1280 1358 1.468506 AAATCCCCAACCAACGGCAC 61.469 55.000 0.00 0.00 0.00 5.01
1328 1407 3.078612 ACCCTCTCTAGAGTTTAACCCCA 59.921 47.826 19.21 0.00 40.48 4.96
1417 1497 4.188462 TCATGGTAAATGTTAGCAGGACG 58.812 43.478 9.68 0.00 32.03 4.79
1467 1547 1.280746 CCTCTGCACACAAACAGCG 59.719 57.895 0.00 0.00 33.80 5.18
1625 1705 7.121168 CACAGTATACCAGGTCATCAAACATTT 59.879 37.037 0.00 0.00 0.00 2.32
1632 1712 4.344968 CCATCACAGTATACCAGGTCATCA 59.655 45.833 0.00 0.00 0.00 3.07
1639 1719 6.672266 AAGATACCCATCACAGTATACCAG 57.328 41.667 0.00 0.00 33.21 4.00
1642 1722 6.647067 GCAGAAAGATACCCATCACAGTATAC 59.353 42.308 0.00 0.00 33.21 1.47
1733 1813 9.507329 AACTATGTGACATGAATGTAGACTTTT 57.493 29.630 8.61 0.00 41.95 2.27
1734 1814 9.155975 GAACTATGTGACATGAATGTAGACTTT 57.844 33.333 8.61 0.00 41.95 2.66
1735 1815 8.535335 AGAACTATGTGACATGAATGTAGACTT 58.465 33.333 8.61 0.00 41.95 3.01
1777 2319 6.665248 TCAGACTGAGATGAAGGAAGAACATA 59.335 38.462 0.00 0.00 0.00 2.29
1866 2412 1.217916 TTCTTCCCACAACCAGGTGA 58.782 50.000 0.00 0.00 41.32 4.02
1884 2430 7.944729 ATGAACAGAATAGGCAAGTGTAATT 57.055 32.000 0.00 0.00 0.00 1.40
1950 2496 7.993183 ACTTTATTCTTGAGACTGGTCTTTTGA 59.007 33.333 4.67 1.64 40.61 2.69
1959 2505 8.192110 GGGAGTAGTACTTTATTCTTGAGACTG 58.808 40.741 0.00 0.00 0.00 3.51
1962 2508 7.560626 GGAGGGAGTAGTACTTTATTCTTGAGA 59.439 40.741 0.00 0.00 0.00 3.27
1979 2525 5.297776 CGAGTAATTTAGAACGGAGGGAGTA 59.702 44.000 0.00 0.00 0.00 2.59
1980 2526 4.097589 CGAGTAATTTAGAACGGAGGGAGT 59.902 45.833 0.00 0.00 0.00 3.85
1981 2527 4.097589 ACGAGTAATTTAGAACGGAGGGAG 59.902 45.833 0.00 0.00 0.00 4.30
1982 2528 4.019174 ACGAGTAATTTAGAACGGAGGGA 58.981 43.478 0.00 0.00 0.00 4.20
1983 2529 4.357996 GACGAGTAATTTAGAACGGAGGG 58.642 47.826 0.00 0.00 0.00 4.30
1984 2530 4.033684 CGACGAGTAATTTAGAACGGAGG 58.966 47.826 0.00 0.00 0.00 4.30
1985 2531 3.481388 GCGACGAGTAATTTAGAACGGAG 59.519 47.826 0.00 0.00 0.00 4.63
1986 2532 3.119884 TGCGACGAGTAATTTAGAACGGA 60.120 43.478 0.00 0.00 0.00 4.69
1987 2533 3.173599 TGCGACGAGTAATTTAGAACGG 58.826 45.455 0.00 0.00 0.00 4.44
1988 2534 4.093514 TCTGCGACGAGTAATTTAGAACG 58.906 43.478 0.00 0.00 0.00 3.95
1989 2535 6.385537 TTTCTGCGACGAGTAATTTAGAAC 57.614 37.500 0.00 0.00 0.00 3.01
1990 2536 6.035650 CCATTTCTGCGACGAGTAATTTAGAA 59.964 38.462 0.00 0.00 0.00 2.10
1991 2537 5.518847 CCATTTCTGCGACGAGTAATTTAGA 59.481 40.000 0.00 0.00 0.00 2.10
1992 2538 5.518847 TCCATTTCTGCGACGAGTAATTTAG 59.481 40.000 0.00 0.00 0.00 1.85
1993 2539 5.412640 TCCATTTCTGCGACGAGTAATTTA 58.587 37.500 0.00 0.00 0.00 1.40
1994 2540 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
1995 2541 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
1996 2542 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
1997 2543 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
1998 2544 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
1999 2545 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
2000 2546 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
2001 2547 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
2002 2548 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
2003 2549 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
2004 2550 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
2005 2551 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
2006 2552 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
2033 2579 8.409371 CGCAGGTATGAATGTATCTAGATGTAT 58.591 37.037 15.79 6.61 0.00 2.29
2034 2580 7.610305 TCGCAGGTATGAATGTATCTAGATGTA 59.390 37.037 15.79 4.44 0.00 2.29
2035 2581 6.434340 TCGCAGGTATGAATGTATCTAGATGT 59.566 38.462 15.79 0.00 0.00 3.06
2036 2582 6.749578 GTCGCAGGTATGAATGTATCTAGATG 59.250 42.308 15.79 0.00 0.00 2.90
2037 2583 6.434340 TGTCGCAGGTATGAATGTATCTAGAT 59.566 38.462 10.73 10.73 0.00 1.98
2038 2584 5.768164 TGTCGCAGGTATGAATGTATCTAGA 59.232 40.000 0.00 0.00 0.00 2.43
2039 2585 6.013842 TGTCGCAGGTATGAATGTATCTAG 57.986 41.667 0.00 0.00 0.00 2.43
2040 2586 6.040504 ACTTGTCGCAGGTATGAATGTATCTA 59.959 38.462 0.00 0.00 0.00 1.98
2041 2587 4.937201 TGTCGCAGGTATGAATGTATCT 57.063 40.909 0.00 0.00 0.00 1.98
2042 2588 5.050490 ACTTGTCGCAGGTATGAATGTATC 58.950 41.667 0.00 0.00 0.00 2.24
2043 2589 5.023533 ACTTGTCGCAGGTATGAATGTAT 57.976 39.130 0.00 0.00 0.00 2.29
2044 2590 4.465632 ACTTGTCGCAGGTATGAATGTA 57.534 40.909 0.00 0.00 0.00 2.29
2045 2591 3.334583 ACTTGTCGCAGGTATGAATGT 57.665 42.857 0.00 0.00 0.00 2.71
2046 2592 5.991328 ATTACTTGTCGCAGGTATGAATG 57.009 39.130 3.46 0.00 0.00 2.67
2047 2593 5.234329 CGAATTACTTGTCGCAGGTATGAAT 59.766 40.000 3.46 0.00 0.00 2.57
2048 2594 4.565166 CGAATTACTTGTCGCAGGTATGAA 59.435 41.667 3.46 0.00 0.00 2.57
2049 2595 4.109766 CGAATTACTTGTCGCAGGTATGA 58.890 43.478 3.46 0.00 0.00 2.15
2050 2596 3.245284 CCGAATTACTTGTCGCAGGTATG 59.755 47.826 3.46 0.00 35.93 2.39
2051 2597 3.131577 TCCGAATTACTTGTCGCAGGTAT 59.868 43.478 3.46 0.00 35.93 2.73
2052 2598 2.492881 TCCGAATTACTTGTCGCAGGTA 59.507 45.455 0.00 0.00 35.93 3.08
2053 2599 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00
2054 2600 2.004583 TCCGAATTACTTGTCGCAGG 57.995 50.000 0.00 0.00 35.93 4.85
2055 2601 2.222508 CGTTCCGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 35.93 5.18
2056 2602 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
2057 2603 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
2058 2604 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
2059 2605 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2060 2606 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2061 2607 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2062 2608 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
2063 2609 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
2064 2610 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
2065 2611 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
2066 2612 1.479730 GTACTCCCTCCGTTCCGAATT 59.520 52.381 0.00 0.00 0.00 2.17
2067 2613 1.109609 GTACTCCCTCCGTTCCGAAT 58.890 55.000 0.00 0.00 0.00 3.34
2068 2614 0.967380 GGTACTCCCTCCGTTCCGAA 60.967 60.000 0.00 0.00 0.00 4.30
2069 2615 1.379044 GGTACTCCCTCCGTTCCGA 60.379 63.158 0.00 0.00 0.00 4.55
2070 2616 1.041447 ATGGTACTCCCTCCGTTCCG 61.041 60.000 0.00 0.00 0.00 4.30
2071 2617 0.464452 CATGGTACTCCCTCCGTTCC 59.536 60.000 0.00 0.00 0.00 3.62
2072 2618 0.179081 GCATGGTACTCCCTCCGTTC 60.179 60.000 0.00 0.00 0.00 3.95
2073 2619 0.907704 TGCATGGTACTCCCTCCGTT 60.908 55.000 0.00 0.00 0.00 4.44
2074 2620 0.907704 TTGCATGGTACTCCCTCCGT 60.908 55.000 0.00 0.00 0.00 4.69
2075 2621 0.251916 TTTGCATGGTACTCCCTCCG 59.748 55.000 0.00 0.00 0.00 4.63
2076 2622 1.559682 TCTTTGCATGGTACTCCCTCC 59.440 52.381 0.00 0.00 0.00 4.30
2077 2623 3.010420 GTTCTTTGCATGGTACTCCCTC 58.990 50.000 0.00 0.00 0.00 4.30
2078 2624 2.644798 AGTTCTTTGCATGGTACTCCCT 59.355 45.455 0.00 0.00 0.00 4.20
2079 2625 2.749621 CAGTTCTTTGCATGGTACTCCC 59.250 50.000 0.00 0.00 0.00 4.30
2080 2626 3.437049 GTCAGTTCTTTGCATGGTACTCC 59.563 47.826 0.00 0.00 0.00 3.85
2081 2627 4.065088 TGTCAGTTCTTTGCATGGTACTC 58.935 43.478 0.00 0.00 0.00 2.59
2082 2628 4.085357 TGTCAGTTCTTTGCATGGTACT 57.915 40.909 0.00 0.00 0.00 2.73
2083 2629 4.829064 TTGTCAGTTCTTTGCATGGTAC 57.171 40.909 0.00 0.00 0.00 3.34
2134 2680 5.592104 TGAACCTAGAAATACATGAGCGA 57.408 39.130 0.00 0.00 0.00 4.93
2136 2682 7.617041 AAGTTGAACCTAGAAATACATGAGC 57.383 36.000 0.00 0.00 0.00 4.26
2170 2716 5.006153 AGCCCAAGTTTTGTTAGTCAAAC 57.994 39.130 0.00 0.00 44.39 2.93
2177 2723 5.133941 TGACACATAGCCCAAGTTTTGTTA 58.866 37.500 0.00 0.00 0.00 2.41
2239 2785 3.972502 GTCTGTCACAAAAATTACACCGC 59.027 43.478 0.00 0.00 0.00 5.68
2240 2786 4.025563 TCGTCTGTCACAAAAATTACACCG 60.026 41.667 0.00 0.00 0.00 4.94
2244 2790 6.743627 TGTTTGTCGTCTGTCACAAAAATTAC 59.256 34.615 0.06 0.00 42.62 1.89
2277 2823 8.905660 ATCAAAATTTGACCATCATTTTGACA 57.094 26.923 20.85 9.80 42.83 3.58
2312 2858 4.474651 ACCTCCATTTACATGAGGTCATCA 59.525 41.667 0.00 0.00 43.70 3.07
2330 2876 2.842645 TTAGTACTCCCTCCACCTCC 57.157 55.000 0.00 0.00 0.00 4.30
2420 2966 8.702438 GCGCATACAAGCAATATTAATTTGATT 58.298 29.630 0.30 9.74 33.28 2.57
2551 3097 6.630443 CAGAACGCTATGATGCAGAAAATAAC 59.370 38.462 0.00 0.00 0.00 1.89
2810 3356 8.652290 AGGAATGTAGATAAATAACAGAGGTCC 58.348 37.037 0.00 0.00 0.00 4.46
2960 3507 8.948631 AAAAGAAGACATAATCGAGCAGAATA 57.051 30.769 0.00 0.00 0.00 1.75
2979 3526 6.479001 CGACCAAGTTAAGAGACTGAAAAGAA 59.521 38.462 0.00 0.00 0.00 2.52
3078 3625 4.282449 TCATCCGAAGAACACTAACCTTGA 59.718 41.667 0.00 0.00 0.00 3.02
3104 3651 4.715527 ATCTTGGTAAGTACTGTCCGTC 57.284 45.455 0.00 0.00 0.00 4.79
3111 3658 8.768397 TCATGTGGATAAATCTTGGTAAGTACT 58.232 33.333 0.00 0.00 0.00 2.73
3122 3669 7.671398 AGGAAAAACAGTCATGTGGATAAATCT 59.329 33.333 0.00 0.00 40.39 2.40
3170 3717 5.112220 TGCCAATCAATATTTCGATCTGC 57.888 39.130 0.00 0.00 0.00 4.26
3499 4046 3.369052 CCACAGGCGTAATAGGAGAAACA 60.369 47.826 0.00 0.00 0.00 2.83
3534 4081 0.520404 TACCTCGCGTGACTCTGAAC 59.480 55.000 10.21 0.00 0.00 3.18
3609 4156 1.870402 CTGCATCCACAACGTGTGTTA 59.130 47.619 14.25 5.56 46.45 2.41
3621 4171 5.708697 CCAATAATGATCTAAGCTGCATCCA 59.291 40.000 1.02 0.00 0.00 3.41
3622 4172 5.942236 TCCAATAATGATCTAAGCTGCATCC 59.058 40.000 1.02 0.00 0.00 3.51
3658 4208 3.809279 GCAAAATTCAGGGTCCAAAAGTG 59.191 43.478 0.00 0.00 0.00 3.16
3659 4209 3.181455 GGCAAAATTCAGGGTCCAAAAGT 60.181 43.478 0.00 0.00 0.00 2.66
3660 4210 3.402110 GGCAAAATTCAGGGTCCAAAAG 58.598 45.455 0.00 0.00 0.00 2.27
3661 4211 2.105649 GGGCAAAATTCAGGGTCCAAAA 59.894 45.455 0.00 0.00 0.00 2.44
3662 4212 1.696884 GGGCAAAATTCAGGGTCCAAA 59.303 47.619 0.00 0.00 0.00 3.28
3663 4213 1.347062 GGGCAAAATTCAGGGTCCAA 58.653 50.000 0.00 0.00 0.00 3.53
3664 4214 0.544120 GGGGCAAAATTCAGGGTCCA 60.544 55.000 0.00 0.00 0.00 4.02
3665 4215 0.544120 TGGGGCAAAATTCAGGGTCC 60.544 55.000 0.00 0.00 0.00 4.46
3666 4216 1.276138 CTTGGGGCAAAATTCAGGGTC 59.724 52.381 0.00 0.00 0.00 4.46
3760 4310 1.151668 AACAGCTCACATTGACGCTC 58.848 50.000 0.00 0.00 31.70 5.03
3787 4339 1.273267 ACCAGCTGACATAGACCCTGA 60.273 52.381 17.39 0.00 0.00 3.86
3860 4565 0.038801 CAGACAGCTTCGACTGCTCA 60.039 55.000 8.91 0.00 41.60 4.26
3863 4568 1.350706 GCTCAGACAGCTTCGACTGC 61.351 60.000 3.10 2.40 45.83 4.40
3912 4617 1.230324 ACGAAAGAAGACAAGGCAGC 58.770 50.000 0.00 0.00 0.00 5.25
3931 4636 1.141019 GGAGTAGGCATCGTGCGAA 59.859 57.895 0.00 0.00 46.21 4.70
3935 4640 1.009829 GCAAAGGAGTAGGCATCGTG 58.990 55.000 0.00 0.00 0.00 4.35
3937 4642 1.576356 GAGCAAAGGAGTAGGCATCG 58.424 55.000 0.00 0.00 0.00 3.84
3938 4643 1.475930 GGGAGCAAAGGAGTAGGCATC 60.476 57.143 0.00 0.00 0.00 3.91
3939 4644 0.548510 GGGAGCAAAGGAGTAGGCAT 59.451 55.000 0.00 0.00 0.00 4.40
3940 4645 1.562672 GGGGAGCAAAGGAGTAGGCA 61.563 60.000 0.00 0.00 0.00 4.75
3941 4646 1.224870 GGGGAGCAAAGGAGTAGGC 59.775 63.158 0.00 0.00 0.00 3.93
3942 4647 0.543749 CAGGGGAGCAAAGGAGTAGG 59.456 60.000 0.00 0.00 0.00 3.18
3943 4648 1.573108 TCAGGGGAGCAAAGGAGTAG 58.427 55.000 0.00 0.00 0.00 2.57
3944 4649 1.839994 CATCAGGGGAGCAAAGGAGTA 59.160 52.381 0.00 0.00 0.00 2.59
3945 4650 0.622665 CATCAGGGGAGCAAAGGAGT 59.377 55.000 0.00 0.00 0.00 3.85
3946 4651 0.750911 GCATCAGGGGAGCAAAGGAG 60.751 60.000 0.00 0.00 0.00 3.69
3947 4652 1.304282 GCATCAGGGGAGCAAAGGA 59.696 57.895 0.00 0.00 0.00 3.36
3948 4653 1.755783 GGCATCAGGGGAGCAAAGG 60.756 63.158 0.00 0.00 0.00 3.11
3949 4654 1.755783 GGGCATCAGGGGAGCAAAG 60.756 63.158 0.00 0.00 0.00 2.77
3950 4655 1.803453 AAGGGCATCAGGGGAGCAAA 61.803 55.000 0.00 0.00 0.00 3.68
3951 4656 2.240918 AAGGGCATCAGGGGAGCAA 61.241 57.895 0.00 0.00 0.00 3.91
3952 4657 2.614969 AAGGGCATCAGGGGAGCA 60.615 61.111 0.00 0.00 0.00 4.26
3953 4658 2.123982 CAAGGGCATCAGGGGAGC 60.124 66.667 0.00 0.00 0.00 4.70
3954 4659 0.040204 AAACAAGGGCATCAGGGGAG 59.960 55.000 0.00 0.00 0.00 4.30
3955 4660 0.486879 AAAACAAGGGCATCAGGGGA 59.513 50.000 0.00 0.00 0.00 4.81
3956 4661 0.609662 CAAAACAAGGGCATCAGGGG 59.390 55.000 0.00 0.00 0.00 4.79
3979 4684 4.404654 GAAAACCCAGCAGCGCCG 62.405 66.667 2.29 0.00 0.00 6.46
3996 4701 2.184322 CCATCCACCGACACGAGG 59.816 66.667 0.00 0.00 0.00 4.63
4003 4708 2.297895 CCCCTTGACCATCCACCGA 61.298 63.158 0.00 0.00 0.00 4.69
4028 4739 3.625764 GGGAAAACCCTTTTTCTTGCAAC 59.374 43.478 0.00 0.00 46.80 4.17
4042 4753 1.552578 ATACAAAGCGGGGGAAAACC 58.447 50.000 0.00 0.00 39.11 3.27
4043 4754 2.094390 GGAATACAAAGCGGGGGAAAAC 60.094 50.000 0.00 0.00 0.00 2.43
4044 4755 2.172679 GGAATACAAAGCGGGGGAAAA 58.827 47.619 0.00 0.00 0.00 2.29
4045 4756 1.075698 TGGAATACAAAGCGGGGGAAA 59.924 47.619 0.00 0.00 0.00 3.13
4046 4757 0.699399 TGGAATACAAAGCGGGGGAA 59.301 50.000 0.00 0.00 0.00 3.97
4047 4758 0.699399 TTGGAATACAAAGCGGGGGA 59.301 50.000 0.00 0.00 35.79 4.81
4048 4759 1.551452 TTTGGAATACAAAGCGGGGG 58.449 50.000 0.00 0.00 43.81 5.40
4055 4766 4.698575 GGTTGGTTGCTTTGGAATACAAA 58.301 39.130 0.00 0.00 46.34 2.83
4056 4767 3.243569 CGGTTGGTTGCTTTGGAATACAA 60.244 43.478 0.00 0.00 37.28 2.41
4057 4768 2.294791 CGGTTGGTTGCTTTGGAATACA 59.705 45.455 0.00 0.00 0.00 2.29
4058 4769 2.554893 TCGGTTGGTTGCTTTGGAATAC 59.445 45.455 0.00 0.00 0.00 1.89
4059 4770 2.865079 TCGGTTGGTTGCTTTGGAATA 58.135 42.857 0.00 0.00 0.00 1.75
4060 4771 1.698506 TCGGTTGGTTGCTTTGGAAT 58.301 45.000 0.00 0.00 0.00 3.01
4061 4772 1.698506 ATCGGTTGGTTGCTTTGGAA 58.301 45.000 0.00 0.00 0.00 3.53
4062 4773 2.156098 GTATCGGTTGGTTGCTTTGGA 58.844 47.619 0.00 0.00 0.00 3.53
4063 4774 1.883275 TGTATCGGTTGGTTGCTTTGG 59.117 47.619 0.00 0.00 0.00 3.28
4064 4775 3.190327 TGATGTATCGGTTGGTTGCTTTG 59.810 43.478 0.00 0.00 0.00 2.77
4065 4776 3.417101 TGATGTATCGGTTGGTTGCTTT 58.583 40.909 0.00 0.00 0.00 3.51
4066 4777 3.066291 TGATGTATCGGTTGGTTGCTT 57.934 42.857 0.00 0.00 0.00 3.91
4067 4778 2.779755 TGATGTATCGGTTGGTTGCT 57.220 45.000 0.00 0.00 0.00 3.91
4068 4779 3.427503 CCTTTGATGTATCGGTTGGTTGC 60.428 47.826 0.00 0.00 0.00 4.17
4069 4780 4.006989 TCCTTTGATGTATCGGTTGGTTG 58.993 43.478 0.00 0.00 0.00 3.77
4070 4781 4.295141 TCCTTTGATGTATCGGTTGGTT 57.705 40.909 0.00 0.00 0.00 3.67
4071 4782 3.992943 TCCTTTGATGTATCGGTTGGT 57.007 42.857 0.00 0.00 0.00 3.67
4072 4783 4.997395 CCTATCCTTTGATGTATCGGTTGG 59.003 45.833 0.00 0.00 32.18 3.77
4073 4784 5.466728 CACCTATCCTTTGATGTATCGGTTG 59.533 44.000 0.00 0.00 32.18 3.77
4074 4785 5.611374 CACCTATCCTTTGATGTATCGGTT 58.389 41.667 0.00 0.00 32.18 4.44
4075 4786 4.503296 GCACCTATCCTTTGATGTATCGGT 60.503 45.833 0.00 0.00 32.18 4.69
4076 4787 3.997021 GCACCTATCCTTTGATGTATCGG 59.003 47.826 0.00 0.00 32.18 4.18
4077 4788 4.687948 CAGCACCTATCCTTTGATGTATCG 59.312 45.833 0.00 0.00 32.18 2.92
4078 4789 4.999950 CCAGCACCTATCCTTTGATGTATC 59.000 45.833 0.00 0.00 32.18 2.24
4079 4790 4.202503 CCCAGCACCTATCCTTTGATGTAT 60.203 45.833 0.00 0.00 32.18 2.29
4080 4791 3.136443 CCCAGCACCTATCCTTTGATGTA 59.864 47.826 0.00 0.00 32.18 2.29
4081 4792 2.092212 CCCAGCACCTATCCTTTGATGT 60.092 50.000 0.00 0.00 32.18 3.06
4082 4793 2.579873 CCCAGCACCTATCCTTTGATG 58.420 52.381 0.00 0.00 32.18 3.07
4083 4794 1.496429 CCCCAGCACCTATCCTTTGAT 59.504 52.381 0.00 0.00 34.87 2.57
4084 4795 0.918983 CCCCAGCACCTATCCTTTGA 59.081 55.000 0.00 0.00 0.00 2.69
4085 4796 0.753111 GCCCCAGCACCTATCCTTTG 60.753 60.000 0.00 0.00 39.53 2.77
4086 4797 1.615262 GCCCCAGCACCTATCCTTT 59.385 57.895 0.00 0.00 39.53 3.11
4087 4798 2.746375 CGCCCCAGCACCTATCCTT 61.746 63.158 0.00 0.00 39.83 3.36
4088 4799 3.164269 CGCCCCAGCACCTATCCT 61.164 66.667 0.00 0.00 39.83 3.24
4089 4800 2.265467 TTTCGCCCCAGCACCTATCC 62.265 60.000 0.00 0.00 39.83 2.59
4090 4801 0.815615 CTTTCGCCCCAGCACCTATC 60.816 60.000 0.00 0.00 39.83 2.08
4091 4802 1.224592 CTTTCGCCCCAGCACCTAT 59.775 57.895 0.00 0.00 39.83 2.57
4092 4803 2.668632 CTTTCGCCCCAGCACCTA 59.331 61.111 0.00 0.00 39.83 3.08
4095 4806 3.741476 CTGCTTTCGCCCCAGCAC 61.741 66.667 0.00 0.00 41.20 4.40
4098 4809 3.741476 GTGCTGCTTTCGCCCCAG 61.741 66.667 0.00 0.00 34.43 4.45
4099 4810 4.577677 TGTGCTGCTTTCGCCCCA 62.578 61.111 0.00 0.00 34.43 4.96
4100 4811 2.548127 GATTGTGCTGCTTTCGCCCC 62.548 60.000 0.00 0.00 34.43 5.80
4101 4812 1.153958 GATTGTGCTGCTTTCGCCC 60.154 57.895 0.00 0.00 34.43 6.13
4102 4813 0.730494 GTGATTGTGCTGCTTTCGCC 60.730 55.000 0.00 0.00 34.43 5.54
4103 4814 0.040157 TGTGATTGTGCTGCTTTCGC 60.040 50.000 0.00 0.25 0.00 4.70
4104 4815 1.265095 AGTGTGATTGTGCTGCTTTCG 59.735 47.619 0.00 0.00 0.00 3.46
4105 4816 4.488126 TTAGTGTGATTGTGCTGCTTTC 57.512 40.909 0.00 0.00 0.00 2.62
4106 4817 4.916983 TTTAGTGTGATTGTGCTGCTTT 57.083 36.364 0.00 0.00 0.00 3.51
4107 4818 4.580167 TCTTTTAGTGTGATTGTGCTGCTT 59.420 37.500 0.00 0.00 0.00 3.91
4108 4819 4.136796 TCTTTTAGTGTGATTGTGCTGCT 58.863 39.130 0.00 0.00 0.00 4.24
4109 4820 4.488126 TCTTTTAGTGTGATTGTGCTGC 57.512 40.909 0.00 0.00 0.00 5.25
4110 4821 5.396362 CGTTTCTTTTAGTGTGATTGTGCTG 59.604 40.000 0.00 0.00 0.00 4.41
4111 4822 5.295787 TCGTTTCTTTTAGTGTGATTGTGCT 59.704 36.000 0.00 0.00 0.00 4.40
4112 4823 5.507077 TCGTTTCTTTTAGTGTGATTGTGC 58.493 37.500 0.00 0.00 0.00 4.57
4113 4824 7.908082 TCTTTCGTTTCTTTTAGTGTGATTGTG 59.092 33.333 0.00 0.00 0.00 3.33
4114 4825 7.981142 TCTTTCGTTTCTTTTAGTGTGATTGT 58.019 30.769 0.00 0.00 0.00 2.71
4115 4826 8.335356 TCTCTTTCGTTTCTTTTAGTGTGATTG 58.665 33.333 0.00 0.00 0.00 2.67
4116 4827 8.433421 TCTCTTTCGTTTCTTTTAGTGTGATT 57.567 30.769 0.00 0.00 0.00 2.57
4117 4828 8.433421 TTCTCTTTCGTTTCTTTTAGTGTGAT 57.567 30.769 0.00 0.00 0.00 3.06
4118 4829 7.837202 TTCTCTTTCGTTTCTTTTAGTGTGA 57.163 32.000 0.00 0.00 0.00 3.58
4119 4830 7.960738 TGTTTCTCTTTCGTTTCTTTTAGTGTG 59.039 33.333 0.00 0.00 0.00 3.82
4120 4831 8.036273 TGTTTCTCTTTCGTTTCTTTTAGTGT 57.964 30.769 0.00 0.00 0.00 3.55
4121 4832 8.786028 GTTGTTTCTCTTTCGTTTCTTTTAGTG 58.214 33.333 0.00 0.00 0.00 2.74
4122 4833 8.508875 TGTTGTTTCTCTTTCGTTTCTTTTAGT 58.491 29.630 0.00 0.00 0.00 2.24
4123 4834 8.889849 TGTTGTTTCTCTTTCGTTTCTTTTAG 57.110 30.769 0.00 0.00 0.00 1.85
4124 4835 9.337091 CTTGTTGTTTCTCTTTCGTTTCTTTTA 57.663 29.630 0.00 0.00 0.00 1.52
4125 4836 8.079809 TCTTGTTGTTTCTCTTTCGTTTCTTTT 58.920 29.630 0.00 0.00 0.00 2.27
4126 4837 7.590279 TCTTGTTGTTTCTCTTTCGTTTCTTT 58.410 30.769 0.00 0.00 0.00 2.52
4127 4838 7.119262 TCTCTTGTTGTTTCTCTTTCGTTTCTT 59.881 33.333 0.00 0.00 0.00 2.52
4128 4839 6.594159 TCTCTTGTTGTTTCTCTTTCGTTTCT 59.406 34.615 0.00 0.00 0.00 2.52
4129 4840 6.772078 TCTCTTGTTGTTTCTCTTTCGTTTC 58.228 36.000 0.00 0.00 0.00 2.78
4130 4841 6.737254 TCTCTTGTTGTTTCTCTTTCGTTT 57.263 33.333 0.00 0.00 0.00 3.60
4131 4842 6.737254 TTCTCTTGTTGTTTCTCTTTCGTT 57.263 33.333 0.00 0.00 0.00 3.85
4132 4843 6.737254 TTTCTCTTGTTGTTTCTCTTTCGT 57.263 33.333 0.00 0.00 0.00 3.85
4133 4844 7.464358 TCTTTTCTCTTGTTGTTTCTCTTTCG 58.536 34.615 0.00 0.00 0.00 3.46
4134 4845 9.794685 ATTCTTTTCTCTTGTTGTTTCTCTTTC 57.205 29.630 0.00 0.00 0.00 2.62
4135 4846 9.578439 CATTCTTTTCTCTTGTTGTTTCTCTTT 57.422 29.630 0.00 0.00 0.00 2.52
4136 4847 7.704047 GCATTCTTTTCTCTTGTTGTTTCTCTT 59.296 33.333 0.00 0.00 0.00 2.85
4137 4848 7.199078 GCATTCTTTTCTCTTGTTGTTTCTCT 58.801 34.615 0.00 0.00 0.00 3.10
4138 4849 6.419116 GGCATTCTTTTCTCTTGTTGTTTCTC 59.581 38.462 0.00 0.00 0.00 2.87
4139 4850 6.276091 GGCATTCTTTTCTCTTGTTGTTTCT 58.724 36.000 0.00 0.00 0.00 2.52
4140 4851 5.173854 CGGCATTCTTTTCTCTTGTTGTTTC 59.826 40.000 0.00 0.00 0.00 2.78
4141 4852 5.043248 CGGCATTCTTTTCTCTTGTTGTTT 58.957 37.500 0.00 0.00 0.00 2.83
4142 4853 4.338118 TCGGCATTCTTTTCTCTTGTTGTT 59.662 37.500 0.00 0.00 0.00 2.83
4143 4854 3.882888 TCGGCATTCTTTTCTCTTGTTGT 59.117 39.130 0.00 0.00 0.00 3.32
4144 4855 4.222114 GTCGGCATTCTTTTCTCTTGTTG 58.778 43.478 0.00 0.00 0.00 3.33
4145 4856 3.882888 TGTCGGCATTCTTTTCTCTTGTT 59.117 39.130 0.00 0.00 0.00 2.83
4146 4857 3.476552 TGTCGGCATTCTTTTCTCTTGT 58.523 40.909 0.00 0.00 0.00 3.16
4147 4858 4.222114 GTTGTCGGCATTCTTTTCTCTTG 58.778 43.478 0.00 0.00 0.00 3.02
4148 4859 3.058914 CGTTGTCGGCATTCTTTTCTCTT 60.059 43.478 0.00 0.00 0.00 2.85
4149 4860 2.480419 CGTTGTCGGCATTCTTTTCTCT 59.520 45.455 0.00 0.00 0.00 3.10
4150 4861 2.478894 TCGTTGTCGGCATTCTTTTCTC 59.521 45.455 0.00 0.00 37.69 2.87
4151 4862 2.223377 GTCGTTGTCGGCATTCTTTTCT 59.777 45.455 0.00 0.00 41.67 2.52
4152 4863 2.571206 GTCGTTGTCGGCATTCTTTTC 58.429 47.619 0.00 0.00 41.67 2.29
4153 4864 1.070175 CGTCGTTGTCGGCATTCTTTT 60.070 47.619 0.00 0.00 42.21 2.27
4154 4865 0.511221 CGTCGTTGTCGGCATTCTTT 59.489 50.000 0.00 0.00 42.21 2.52
4155 4866 1.289109 CCGTCGTTGTCGGCATTCTT 61.289 55.000 0.00 0.00 42.21 2.52
4156 4867 1.736645 CCGTCGTTGTCGGCATTCT 60.737 57.895 0.00 0.00 42.21 2.40
4157 4868 1.082117 ATCCGTCGTTGTCGGCATTC 61.082 55.000 0.00 0.00 46.49 2.67
4158 4869 1.079405 ATCCGTCGTTGTCGGCATT 60.079 52.632 0.00 0.00 46.49 3.56
4159 4870 1.518572 GATCCGTCGTTGTCGGCAT 60.519 57.895 0.00 0.00 46.49 4.40
4160 4871 2.126228 GATCCGTCGTTGTCGGCA 60.126 61.111 0.00 0.00 46.49 5.69
4161 4872 3.245315 CGATCCGTCGTTGTCGGC 61.245 66.667 0.00 0.00 46.49 5.54
4167 4878 4.802175 TCGTTTTCGTCGATCCGTCGTT 62.802 50.000 0.00 0.00 44.13 3.85
4168 4879 3.371712 TCGTTTTCGTCGATCCGTCGT 62.372 52.381 0.00 0.00 44.13 4.34
4169 4880 0.790495 TCGTTTTCGTCGATCCGTCG 60.790 55.000 0.00 0.00 44.65 5.12
4170 4881 1.316735 CTTCGTTTTCGTCGATCCGTC 59.683 52.381 0.00 0.00 44.46 4.79
4171 4882 1.069022 TCTTCGTTTTCGTCGATCCGT 60.069 47.619 0.00 0.00 44.46 4.69
4172 4883 1.609932 TCTTCGTTTTCGTCGATCCG 58.390 50.000 0.00 0.00 44.46 4.18
4173 4884 2.222530 GCTTCTTCGTTTTCGTCGATCC 60.223 50.000 0.00 0.00 44.46 3.36
4174 4885 2.662156 AGCTTCTTCGTTTTCGTCGATC 59.338 45.455 0.00 0.00 44.46 3.69
4175 4886 2.673833 AGCTTCTTCGTTTTCGTCGAT 58.326 42.857 0.00 0.00 44.46 3.59
4176 4887 2.129823 AGCTTCTTCGTTTTCGTCGA 57.870 45.000 0.00 0.00 44.46 4.20
4177 4888 2.217847 TGAAGCTTCTTCGTTTTCGTCG 59.782 45.455 26.09 0.00 44.46 5.12
4178 4889 3.532950 GTGAAGCTTCTTCGTTTTCGTC 58.467 45.455 26.09 0.00 44.46 4.20
4179 4890 2.034001 CGTGAAGCTTCTTCGTTTTCGT 60.034 45.455 26.09 0.00 44.46 3.85
4180 4891 2.217847 TCGTGAAGCTTCTTCGTTTTCG 59.782 45.455 28.67 19.13 45.64 3.46
4181 4892 3.532950 GTCGTGAAGCTTCTTCGTTTTC 58.467 45.455 28.67 19.31 0.00 2.29
4182 4893 2.287103 GGTCGTGAAGCTTCTTCGTTTT 59.713 45.455 28.67 0.00 0.00 2.43
4183 4894 1.865340 GGTCGTGAAGCTTCTTCGTTT 59.135 47.619 28.67 0.00 0.00 3.60
4184 4895 1.202486 TGGTCGTGAAGCTTCTTCGTT 60.202 47.619 28.67 0.00 0.00 3.85
4185 4896 0.387929 TGGTCGTGAAGCTTCTTCGT 59.612 50.000 28.67 0.00 0.00 3.85
4186 4897 0.784778 GTGGTCGTGAAGCTTCTTCG 59.215 55.000 26.09 26.23 0.00 3.79
4187 4898 1.795286 CAGTGGTCGTGAAGCTTCTTC 59.205 52.381 26.09 17.48 0.00 2.87
4188 4899 1.871080 CAGTGGTCGTGAAGCTTCTT 58.129 50.000 26.09 0.00 0.00 2.52
4189 4900 0.601311 GCAGTGGTCGTGAAGCTTCT 60.601 55.000 26.09 1.25 0.00 2.85
4190 4901 1.862806 GCAGTGGTCGTGAAGCTTC 59.137 57.895 19.89 19.89 0.00 3.86
4191 4902 1.956170 CGCAGTGGTCGTGAAGCTT 60.956 57.895 0.00 0.00 0.00 3.74
4192 4903 2.356313 CGCAGTGGTCGTGAAGCT 60.356 61.111 0.00 0.00 0.00 3.74
4193 4904 4.077188 GCGCAGTGGTCGTGAAGC 62.077 66.667 0.30 0.00 0.00 3.86
4194 4905 3.414700 GGCGCAGTGGTCGTGAAG 61.415 66.667 10.83 0.00 0.00 3.02
4195 4906 4.980805 GGGCGCAGTGGTCGTGAA 62.981 66.667 10.83 0.00 0.00 3.18
4203 4914 3.958147 ATCTTCGGTGGGCGCAGTG 62.958 63.158 10.83 0.00 0.00 3.66
4204 4915 3.665675 GATCTTCGGTGGGCGCAGT 62.666 63.158 10.83 0.00 0.00 4.40
4205 4916 2.892425 GATCTTCGGTGGGCGCAG 60.892 66.667 10.83 0.00 0.00 5.18
4206 4917 3.371097 GAGATCTTCGGTGGGCGCA 62.371 63.158 10.83 0.00 0.00 6.09
4207 4918 2.586357 GAGATCTTCGGTGGGCGC 60.586 66.667 0.00 0.00 0.00 6.53
4208 4919 2.107141 GGAGATCTTCGGTGGGCG 59.893 66.667 0.00 0.00 0.00 6.13
4209 4920 2.367202 TGGGAGATCTTCGGTGGGC 61.367 63.158 0.00 0.00 0.00 5.36
4210 4921 1.522569 GTGGGAGATCTTCGGTGGG 59.477 63.158 0.00 0.00 0.00 4.61
4211 4922 1.141881 CGTGGGAGATCTTCGGTGG 59.858 63.158 0.00 0.00 0.00 4.61
4212 4923 0.530744 TTCGTGGGAGATCTTCGGTG 59.469 55.000 0.00 0.00 0.00 4.94
4213 4924 0.818296 CTTCGTGGGAGATCTTCGGT 59.182 55.000 0.00 0.00 0.00 4.69
4214 4925 0.528684 GCTTCGTGGGAGATCTTCGG 60.529 60.000 0.00 0.00 0.00 4.30
4215 4926 0.457851 AGCTTCGTGGGAGATCTTCG 59.542 55.000 0.00 0.58 0.00 3.79
4216 4927 1.202475 GGAGCTTCGTGGGAGATCTTC 60.202 57.143 0.00 0.00 0.00 2.87
4217 4928 0.827368 GGAGCTTCGTGGGAGATCTT 59.173 55.000 0.00 0.00 0.00 2.40
4218 4929 0.324738 TGGAGCTTCGTGGGAGATCT 60.325 55.000 0.00 0.00 0.00 2.75
4219 4930 0.537188 TTGGAGCTTCGTGGGAGATC 59.463 55.000 0.00 0.00 0.00 2.75
4220 4931 0.539051 CTTGGAGCTTCGTGGGAGAT 59.461 55.000 0.00 0.00 0.00 2.75
4221 4932 1.544825 CCTTGGAGCTTCGTGGGAGA 61.545 60.000 0.00 0.00 0.00 3.71
4222 4933 1.078848 CCTTGGAGCTTCGTGGGAG 60.079 63.158 0.00 0.00 0.00 4.30
4223 4934 3.068881 CCTTGGAGCTTCGTGGGA 58.931 61.111 0.00 0.00 0.00 4.37
4224 4935 2.747855 GCCTTGGAGCTTCGTGGG 60.748 66.667 5.40 0.02 0.00 4.61
4225 4936 1.743252 GAGCCTTGGAGCTTCGTGG 60.743 63.158 0.00 0.00 45.15 4.94
4226 4937 1.743252 GGAGCCTTGGAGCTTCGTG 60.743 63.158 0.00 0.00 45.15 4.35
4227 4938 2.665603 GGAGCCTTGGAGCTTCGT 59.334 61.111 0.00 0.00 45.15 3.85
4229 4940 0.742635 CTTCGGAGCCTTGGAGCTTC 60.743 60.000 0.00 0.00 45.15 3.86
4230 4941 1.298014 CTTCGGAGCCTTGGAGCTT 59.702 57.895 0.00 0.00 45.15 3.74
4232 4943 2.821810 GCTTCGGAGCCTTGGAGC 60.822 66.667 3.57 0.00 43.29 4.70
4244 4955 0.390603 TGATTGGTACCGGTGCTTCG 60.391 55.000 22.50 0.00 0.00 3.79
4245 4956 1.467342 GTTGATTGGTACCGGTGCTTC 59.533 52.381 22.50 16.14 0.00 3.86
4246 4957 1.202830 TGTTGATTGGTACCGGTGCTT 60.203 47.619 22.50 7.78 0.00 3.91
4247 4958 0.398696 TGTTGATTGGTACCGGTGCT 59.601 50.000 22.50 2.15 0.00 4.40
4248 4959 0.519961 GTGTTGATTGGTACCGGTGC 59.480 55.000 19.93 17.43 0.00 5.01
4249 4960 1.161843 GGTGTTGATTGGTACCGGTG 58.838 55.000 19.93 0.00 0.00 4.94
4250 4961 1.061546 AGGTGTTGATTGGTACCGGT 58.938 50.000 13.98 13.98 38.24 5.28
4251 4962 2.081462 GAAGGTGTTGATTGGTACCGG 58.919 52.381 7.57 0.00 38.24 5.28
4252 4963 2.773487 TGAAGGTGTTGATTGGTACCG 58.227 47.619 7.57 0.00 38.24 4.02
4253 4964 4.394729 TCTTGAAGGTGTTGATTGGTACC 58.605 43.478 4.43 4.43 0.00 3.34
4254 4965 5.048713 CCTTCTTGAAGGTGTTGATTGGTAC 60.049 44.000 18.52 0.00 35.22 3.34
4255 4966 5.070001 CCTTCTTGAAGGTGTTGATTGGTA 58.930 41.667 18.52 0.00 35.22 3.25
4256 4967 3.891366 CCTTCTTGAAGGTGTTGATTGGT 59.109 43.478 18.52 0.00 35.22 3.67
4257 4968 4.022849 GTCCTTCTTGAAGGTGTTGATTGG 60.023 45.833 23.78 1.51 40.81 3.16
4258 4969 4.022849 GGTCCTTCTTGAAGGTGTTGATTG 60.023 45.833 23.78 1.45 40.81 2.67
4259 4970 4.145052 GGTCCTTCTTGAAGGTGTTGATT 58.855 43.478 23.78 0.00 40.81 2.57
4260 4971 3.756117 GGTCCTTCTTGAAGGTGTTGAT 58.244 45.455 23.78 0.00 40.81 2.57
4261 4972 2.484770 CGGTCCTTCTTGAAGGTGTTGA 60.485 50.000 23.78 6.50 40.81 3.18
4262 4973 1.873591 CGGTCCTTCTTGAAGGTGTTG 59.126 52.381 23.78 12.04 40.81 3.33
4263 4974 1.814248 GCGGTCCTTCTTGAAGGTGTT 60.814 52.381 23.78 0.00 40.81 3.32
4264 4975 0.250338 GCGGTCCTTCTTGAAGGTGT 60.250 55.000 23.78 0.00 40.81 4.16
4265 4976 1.291877 CGCGGTCCTTCTTGAAGGTG 61.292 60.000 23.78 17.10 40.81 4.00
4266 4977 1.004918 CGCGGTCCTTCTTGAAGGT 60.005 57.895 23.78 0.00 40.81 3.50
4267 4978 1.014564 GTCGCGGTCCTTCTTGAAGG 61.015 60.000 20.21 20.21 41.35 3.46
4268 4979 1.344942 CGTCGCGGTCCTTCTTGAAG 61.345 60.000 6.13 3.55 0.00 3.02
4269 4980 1.372499 CGTCGCGGTCCTTCTTGAA 60.372 57.895 6.13 0.00 0.00 2.69
4270 4981 1.798234 TTCGTCGCGGTCCTTCTTGA 61.798 55.000 6.13 0.00 0.00 3.02
4271 4982 1.344942 CTTCGTCGCGGTCCTTCTTG 61.345 60.000 6.13 0.00 0.00 3.02
4272 4983 1.080705 CTTCGTCGCGGTCCTTCTT 60.081 57.895 6.13 0.00 0.00 2.52
4273 4984 1.970114 TCTTCGTCGCGGTCCTTCT 60.970 57.895 6.13 0.00 0.00 2.85
4274 4985 1.800713 GTCTTCGTCGCGGTCCTTC 60.801 63.158 6.13 0.00 0.00 3.46
4275 4986 2.257676 GTCTTCGTCGCGGTCCTT 59.742 61.111 6.13 0.00 0.00 3.36
4276 4987 4.099170 CGTCTTCGTCGCGGTCCT 62.099 66.667 6.13 0.00 0.00 3.85
4277 4988 4.093952 TCGTCTTCGTCGCGGTCC 62.094 66.667 6.13 0.00 38.33 4.46
4278 4989 2.868787 GTCGTCTTCGTCGCGGTC 60.869 66.667 6.13 0.00 38.33 4.79
4279 4990 4.731503 CGTCGTCTTCGTCGCGGT 62.732 66.667 6.13 0.00 40.72 5.68
4283 4994 3.524759 GCAGCGTCGTCTTCGTCG 61.525 66.667 0.00 3.42 46.99 5.12
4284 4995 2.126812 AGCAGCGTCGTCTTCGTC 60.127 61.111 0.00 0.00 38.33 4.20
4285 4996 2.429236 CAGCAGCGTCGTCTTCGT 60.429 61.111 0.00 0.00 38.33 3.85
4286 4997 3.832171 GCAGCAGCGTCGTCTTCG 61.832 66.667 0.00 0.00 38.55 3.79
4287 4998 3.482783 GGCAGCAGCGTCGTCTTC 61.483 66.667 0.00 0.00 43.41 2.87
4288 4999 3.807631 TTGGCAGCAGCGTCGTCTT 62.808 57.895 0.00 0.00 43.41 3.01
4289 5000 4.299547 TTGGCAGCAGCGTCGTCT 62.300 61.111 0.00 0.00 43.41 4.18
4290 5001 3.782244 CTTGGCAGCAGCGTCGTC 61.782 66.667 0.00 0.00 43.41 4.20
4294 5005 4.586235 AACCCTTGGCAGCAGCGT 62.586 61.111 0.00 0.00 43.41 5.07
4295 5006 3.273080 GAAACCCTTGGCAGCAGCG 62.273 63.158 0.00 0.00 43.41 5.18
4296 5007 2.653115 GAAACCCTTGGCAGCAGC 59.347 61.111 0.00 0.00 41.10 5.25
4297 5008 3.369921 GGAAACCCTTGGCAGCAG 58.630 61.111 0.00 0.00 0.00 4.24
4308 5019 0.460811 GTCGTGTATCGGGGGAAACC 60.461 60.000 0.00 0.00 44.28 3.27
4309 5020 0.533951 AGTCGTGTATCGGGGGAAAC 59.466 55.000 0.00 0.00 40.32 2.78
4310 5021 2.026641 CTAGTCGTGTATCGGGGGAAA 58.973 52.381 0.00 0.00 40.32 3.13
4311 5022 1.683943 CTAGTCGTGTATCGGGGGAA 58.316 55.000 0.00 0.00 40.32 3.97
4312 5023 0.179009 CCTAGTCGTGTATCGGGGGA 60.179 60.000 0.00 0.00 40.32 4.81
4313 5024 1.803366 GCCTAGTCGTGTATCGGGGG 61.803 65.000 0.00 0.00 40.32 5.40
4314 5025 1.658673 GCCTAGTCGTGTATCGGGG 59.341 63.158 0.00 0.00 40.32 5.73
4315 5026 1.162181 TCGCCTAGTCGTGTATCGGG 61.162 60.000 0.00 0.00 40.32 5.14
4316 5027 0.235144 CTCGCCTAGTCGTGTATCGG 59.765 60.000 0.00 0.00 40.32 4.18
4317 5028 1.192757 CTCTCGCCTAGTCGTGTATCG 59.807 57.143 0.00 0.00 41.41 2.92
4318 5029 1.532007 CCTCTCGCCTAGTCGTGTATC 59.468 57.143 0.00 0.00 0.00 2.24
4319 5030 1.140452 TCCTCTCGCCTAGTCGTGTAT 59.860 52.381 0.00 0.00 0.00 2.29
4320 5031 0.538584 TCCTCTCGCCTAGTCGTGTA 59.461 55.000 0.00 0.00 0.00 2.90
4321 5032 0.322277 TTCCTCTCGCCTAGTCGTGT 60.322 55.000 0.00 0.00 0.00 4.49
4322 5033 0.378962 CTTCCTCTCGCCTAGTCGTG 59.621 60.000 0.00 0.00 0.00 4.35
4323 5034 0.748729 CCTTCCTCTCGCCTAGTCGT 60.749 60.000 0.00 0.00 0.00 4.34
4324 5035 1.448922 CCCTTCCTCTCGCCTAGTCG 61.449 65.000 0.00 0.00 0.00 4.18
4325 5036 0.396001 ACCCTTCCTCTCGCCTAGTC 60.396 60.000 0.00 0.00 0.00 2.59
4326 5037 0.396001 GACCCTTCCTCTCGCCTAGT 60.396 60.000 0.00 0.00 0.00 2.57
4327 5038 1.448922 CGACCCTTCCTCTCGCCTAG 61.449 65.000 0.00 0.00 0.00 3.02
4328 5039 1.453379 CGACCCTTCCTCTCGCCTA 60.453 63.158 0.00 0.00 0.00 3.93
4329 5040 2.756283 CGACCCTTCCTCTCGCCT 60.756 66.667 0.00 0.00 0.00 5.52
4330 5041 4.516195 GCGACCCTTCCTCTCGCC 62.516 72.222 0.00 0.00 45.60 5.54
4348 5059 4.715130 TCCTGGAGGGTGTCGGGG 62.715 72.222 0.00 0.00 36.25 5.73
4349 5060 2.606519 TTCCTGGAGGGTGTCGGG 60.607 66.667 0.00 0.00 36.25 5.14
4350 5061 2.660064 CCTTCCTGGAGGGTGTCGG 61.660 68.421 16.37 0.00 38.35 4.79
4351 5062 1.889530 GACCTTCCTGGAGGGTGTCG 61.890 65.000 32.55 6.36 42.14 4.35
4352 5063 1.554583 GGACCTTCCTGGAGGGTGTC 61.555 65.000 32.55 19.50 42.14 3.67
4353 5064 1.539124 GGACCTTCCTGGAGGGTGT 60.539 63.158 32.55 11.44 42.14 4.16
4354 5065 2.660064 CGGACCTTCCTGGAGGGTG 61.660 68.421 32.55 16.82 42.14 4.61
4355 5066 2.284699 CGGACCTTCCTGGAGGGT 60.285 66.667 28.61 28.61 44.78 4.34
4356 5067 3.083997 CCGGACCTTCCTGGAGGG 61.084 72.222 22.26 22.26 41.31 4.30
4357 5068 3.787001 GCCGGACCTTCCTGGAGG 61.787 72.222 5.05 9.73 42.75 4.30
4358 5069 4.148825 CGCCGGACCTTCCTGGAG 62.149 72.222 5.05 0.00 39.71 3.86
4396 5107 4.736896 GGCCTGTCCGACACCGAC 62.737 72.222 0.00 0.00 38.22 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.