Multiple sequence alignment - TraesCS6A01G171400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G171400 chr6A 100.000 6354 0 0 1 6354 182305088 182311441 0.000000e+00 11734.0
1 TraesCS6A01G171400 chr6A 91.803 61 5 0 6041 6101 84061973 84061913 1.140000e-12 86.1
2 TraesCS6A01G171400 chr6B 95.215 2884 128 7 1 2878 239310148 239313027 0.000000e+00 4553.0
3 TraesCS6A01G171400 chr6B 89.429 1173 71 22 4204 5373 239314886 239316008 0.000000e+00 1430.0
4 TraesCS6A01G171400 chr6B 94.715 473 24 1 3648 4120 239314079 239314550 0.000000e+00 734.0
5 TraesCS6A01G171400 chr6B 95.547 247 8 2 3064 3308 239313202 239313447 5.970000e-105 392.0
6 TraesCS6A01G171400 chr6B 96.257 187 7 0 3319 3505 239313528 239313714 2.230000e-79 307.0
7 TraesCS6A01G171400 chr6B 95.402 174 8 0 2810 2983 239313031 239313204 1.740000e-70 278.0
8 TraesCS6A01G171400 chr6B 85.603 257 16 6 5800 6041 239316219 239316469 3.800000e-62 250.0
9 TraesCS6A01G171400 chr6B 90.751 173 12 2 3489 3661 239313887 239314055 1.780000e-55 228.0
10 TraesCS6A01G171400 chr6B 98.592 71 1 0 6041 6111 239316898 239316968 6.690000e-25 126.0
11 TraesCS6A01G171400 chr6B 97.101 69 2 0 2810 2878 239312995 239313063 4.020000e-22 117.0
12 TraesCS6A01G171400 chr6B 92.000 75 3 3 5468 5540 710003202 710003129 1.130000e-17 102.0
13 TraesCS6A01G171400 chr6D 95.285 2142 90 8 703 2842 139369413 139371545 0.000000e+00 3386.0
14 TraesCS6A01G171400 chr6D 94.679 1184 51 6 4196 5373 139373172 139374349 0.000000e+00 1827.0
15 TraesCS6A01G171400 chr6D 90.646 588 27 6 1 584 139368706 139369269 0.000000e+00 756.0
16 TraesCS6A01G171400 chr6D 94.143 461 27 0 3648 4108 139372336 139372796 0.000000e+00 702.0
17 TraesCS6A01G171400 chr6D 92.128 343 26 1 3319 3661 139371971 139372312 3.440000e-132 483.0
18 TraesCS6A01G171400 chr6D 89.175 388 29 8 5663 6041 139374751 139375134 7.460000e-129 472.0
19 TraesCS6A01G171400 chr6D 95.161 248 8 3 3064 3310 139371648 139371892 7.730000e-104 388.0
20 TraesCS6A01G171400 chr6D 91.304 138 12 0 2846 2983 139371513 139371650 8.410000e-44 189.0
21 TraesCS6A01G171400 chr6D 94.382 89 5 0 574 662 139369326 139369414 3.090000e-28 137.0
22 TraesCS6A01G171400 chr6D 87.500 56 7 0 6299 6354 139375270 139375325 1.480000e-06 65.8
23 TraesCS6A01G171400 chr7B 81.422 2912 387 100 1 2809 593645528 593642668 0.000000e+00 2239.0
24 TraesCS6A01G171400 chr7B 81.342 1222 174 38 4219 5413 593640926 593639732 0.000000e+00 944.0
25 TraesCS6A01G171400 chr7B 83.476 466 60 12 3648 4100 593641751 593641290 9.850000e-113 418.0
26 TraesCS6A01G171400 chr7B 93.000 100 5 1 2981 3080 40180651 40180748 1.850000e-30 145.0
27 TraesCS6A01G171400 chr7B 91.429 105 7 2 2963 3066 213475737 213475634 6.640000e-30 143.0
28 TraesCS6A01G171400 chr7A 81.431 2908 384 99 1 2809 634965303 634962453 0.000000e+00 2235.0
29 TraesCS6A01G171400 chr7A 80.797 1255 178 38 4239 5466 634960642 634959424 0.000000e+00 924.0
30 TraesCS6A01G171400 chr7A 83.047 466 61 12 3648 4100 634961511 634961051 2.130000e-109 407.0
31 TraesCS6A01G171400 chr7A 84.302 172 20 7 3371 3538 634961856 634961688 1.830000e-35 161.0
32 TraesCS6A01G171400 chr7A 93.814 97 5 1 2980 3075 211640930 211640834 1.850000e-30 145.0
33 TraesCS6A01G171400 chr7A 89.394 66 6 1 5477 5541 707634052 707633987 1.470000e-11 82.4
34 TraesCS6A01G171400 chr7D 81.900 2232 288 75 660 2809 549516434 549514237 0.000000e+00 1777.0
35 TraesCS6A01G171400 chr7D 81.014 1243 180 36 4246 5466 549512326 549511118 0.000000e+00 937.0
36 TraesCS6A01G171400 chr7D 85.030 668 72 11 1 657 549517170 549516520 0.000000e+00 654.0
37 TraesCS6A01G171400 chr7D 83.445 447 57 11 3667 4100 549513274 549512832 3.570000e-107 399.0
38 TraesCS6A01G171400 chr7D 84.211 171 22 5 3371 3538 549513640 549513472 1.830000e-35 161.0
39 TraesCS6A01G171400 chr7D 96.629 89 3 0 2981 3069 531177967 531177879 1.430000e-31 148.0
40 TraesCS6A01G171400 chr7D 93.750 48 2 1 5480 5526 614896255 614896208 3.180000e-08 71.3
41 TraesCS6A01G171400 chr4B 77.408 1952 344 58 749 2631 121941968 121940045 0.000000e+00 1072.0
42 TraesCS6A01G171400 chr4B 81.642 670 82 17 131 790 121942614 121941976 9.440000e-143 518.0
43 TraesCS6A01G171400 chr4B 82.787 244 31 10 3067 3309 121939743 121939510 2.320000e-49 207.0
44 TraesCS6A01G171400 chr4B 83.770 191 27 2 3329 3517 121939416 121939228 1.820000e-40 178.0
45 TraesCS6A01G171400 chr4B 92.233 103 8 0 2978 3080 413719660 413719558 5.130000e-31 147.0
46 TraesCS6A01G171400 chr2D 76.546 469 59 26 4681 5141 620269953 620269528 6.460000e-50 209.0
47 TraesCS6A01G171400 chr5A 93.103 116 1 6 2962 3070 437164237 437164352 5.100000e-36 163.0
48 TraesCS6A01G171400 chr5A 81.319 91 6 4 5462 5541 374902834 374902744 5.320000e-06 63.9
49 TraesCS6A01G171400 chr3D 96.629 89 3 0 2979 3067 505561854 505561942 1.430000e-31 148.0
50 TraesCS6A01G171400 chr1B 95.604 91 4 0 2977 3067 112301097 112301007 5.130000e-31 147.0
51 TraesCS6A01G171400 chr1B 84.810 79 7 3 5469 5546 452570857 452570931 2.460000e-09 75.0
52 TraesCS6A01G171400 chr1A 94.681 94 5 0 2979 3072 345300416 345300323 5.130000e-31 147.0
53 TraesCS6A01G171400 chr2B 90.909 55 4 1 5470 5524 366019493 366019546 8.840000e-09 73.1
54 TraesCS6A01G171400 chrUn 84.848 66 8 2 5470 5534 245250794 245250730 1.480000e-06 65.8
55 TraesCS6A01G171400 chrUn 84.848 66 7 2 5470 5534 37971135 37971198 5.320000e-06 63.9
56 TraesCS6A01G171400 chr3B 80.899 89 11 4 5466 5554 20446111 20446029 1.480000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G171400 chr6A 182305088 182311441 6353 False 11734.000000 11734 100.00000 1 6354 1 chr6A.!!$F1 6353
1 TraesCS6A01G171400 chr6B 239310148 239316968 6820 False 841.500000 4553 93.86120 1 6111 10 chr6B.!!$F1 6110
2 TraesCS6A01G171400 chr6D 139368706 139375325 6619 False 840.580000 3386 92.44030 1 6354 10 chr6D.!!$F1 6353
3 TraesCS6A01G171400 chr7B 593639732 593645528 5796 True 1200.333333 2239 82.08000 1 5413 3 chr7B.!!$R2 5412
4 TraesCS6A01G171400 chr7A 634959424 634965303 5879 True 931.750000 2235 82.39425 1 5466 4 chr7A.!!$R3 5465
5 TraesCS6A01G171400 chr7D 549511118 549517170 6052 True 785.600000 1777 83.12000 1 5466 5 chr7D.!!$R3 5465
6 TraesCS6A01G171400 chr4B 121939228 121942614 3386 True 493.750000 1072 81.40175 131 3517 4 chr4B.!!$R2 3386

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
513 534 1.339151 GGAGCTTCCAGACGTTCCATT 60.339 52.381 2.70 0.0 36.28 3.16 F
1873 2138 1.374758 GGTCGCTCCAGTTCACCTG 60.375 63.158 0.00 0.0 41.15 4.00 F
2116 2393 1.746220 TGGAAAAGTCAACCACCAACG 59.254 47.619 0.00 0.0 0.00 4.10 F
3311 3730 1.631405 TTTTGCCAGGTCAGGATTGG 58.369 50.000 0.00 0.0 35.06 3.16 F
3649 4375 0.101579 TGACAACAGTTGCGTCGAGA 59.898 50.000 13.56 0.0 32.17 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1939 2211 0.096454 GATAACAAGTCGGCGTTGGC 59.904 55.000 6.85 0.0 38.9 4.52 R
2827 3212 1.068541 GGTCATGTCCCAAAGCGAAAC 60.069 52.381 0.00 0.0 0.0 2.78 R
3614 4340 2.098614 TGTCACAATGCAAACACCAGT 58.901 42.857 0.00 0.0 0.0 4.00 R
4145 4918 0.041535 TACATACCCACCCACCGACT 59.958 55.000 0.00 0.0 0.0 4.18 R
5465 6700 0.470341 GGGATGGAGGGAGTACTTGC 59.530 60.000 0.00 0.0 0.0 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 6.604795 GCAGGGCATATAATGATCATAAAGGT 59.395 38.462 9.04 0.00 0.00 3.50
90 93 4.516953 ATCCTTCCTATGGGGAGAAGAT 57.483 45.455 4.61 0.00 46.01 2.40
96 100 2.694397 CTATGGGGAGAAGATGTGGGA 58.306 52.381 0.00 0.00 0.00 4.37
101 105 3.311327 TGGGGAGAAGATGTGGGATTCTA 60.311 47.826 0.00 0.00 33.53 2.10
192 196 2.789409 GGAACCAGGTGCTTGTATCT 57.211 50.000 0.00 0.00 0.00 1.98
251 260 6.939551 AATCAATATAGCAAATGCATTCGC 57.060 33.333 14.61 14.61 45.16 4.70
379 390 1.627329 AGATGGATGTGCAGTGTGAGT 59.373 47.619 0.00 0.00 0.00 3.41
513 534 1.339151 GGAGCTTCCAGACGTTCCATT 60.339 52.381 2.70 0.00 36.28 3.16
657 753 6.035866 ACCGACTCGCTAGATAGAATAATACG 59.964 42.308 0.00 0.00 0.00 3.06
780 1006 6.321435 CCAAGAGTGACTGTCATACCATACTA 59.679 42.308 14.37 0.00 0.00 1.82
937 1164 2.122768 TGGTTTTTCTTGGGTGGCATT 58.877 42.857 0.00 0.00 0.00 3.56
1111 1354 5.700402 AGAGGCTTTGTATGTGGTAAGAT 57.300 39.130 0.00 0.00 0.00 2.40
1130 1373 8.787852 GGTAAGATATTGATCCTGTTTTCATCC 58.212 37.037 0.00 0.00 31.81 3.51
1298 1543 3.628032 TGAGTACTACTCTTGCATCTCCG 59.372 47.826 15.76 0.00 45.27 4.63
1302 1547 3.851098 ACTACTCTTGCATCTCCGTTTC 58.149 45.455 0.00 0.00 0.00 2.78
1348 1598 8.024865 TCTCACTAAAAACATGCATTTCAGATG 58.975 33.333 0.00 0.00 0.00 2.90
1755 2013 5.643664 TGTACGTGTGGACACTATTGTATC 58.356 41.667 8.24 0.72 44.34 2.24
1764 2024 7.334171 TGTGGACACTATTGTATCATCTGTTTG 59.666 37.037 3.91 0.00 35.47 2.93
1873 2138 1.374758 GGTCGCTCCAGTTCACCTG 60.375 63.158 0.00 0.00 41.15 4.00
1913 2180 2.224066 GCAGATCCTACACGCCTACATT 60.224 50.000 0.00 0.00 0.00 2.71
1930 2202 6.798959 GCCTACATTTTCGATAATTGCAGATC 59.201 38.462 0.00 0.00 0.00 2.75
2006 2280 6.879458 TGAAGGTCTTTTCTGTCTTATAAGCC 59.121 38.462 7.67 0.00 0.00 4.35
2023 2297 9.868277 CTTATAAGCCTCTTCTATATCAAGTGG 57.132 37.037 0.00 9.59 37.51 4.00
2045 2319 3.328382 AGTTTGCATCGTGCTACCTTA 57.672 42.857 10.54 0.00 45.31 2.69
2116 2393 1.746220 TGGAAAAGTCAACCACCAACG 59.254 47.619 0.00 0.00 0.00 4.10
2139 2416 7.464358 ACGTTGTTCATTATTTCATAGAGCAC 58.536 34.615 0.00 0.00 0.00 4.40
2282 2571 3.496130 CGGAGTTGGATGTATGCTCATTC 59.504 47.826 0.00 0.00 0.00 2.67
2675 2988 6.802348 CGATAAGGTGAGTATGTACTATGCAC 59.198 42.308 0.00 0.00 36.50 4.57
2680 2993 8.338072 AGGTGAGTATGTACTATGCACTATAC 57.662 38.462 0.00 0.00 36.50 1.47
2681 2994 7.942894 AGGTGAGTATGTACTATGCACTATACA 59.057 37.037 7.90 7.90 36.50 2.29
2702 3015 5.654497 ACACTGCTCTTTGGAAAGAAAAAG 58.346 37.500 3.52 4.29 43.84 2.27
2710 3023 7.973944 GCTCTTTGGAAAGAAAAAGACTGTTAA 59.026 33.333 3.52 0.00 43.84 2.01
2727 3040 9.760077 AGACTGTTAATCATATTTTAGTACCCG 57.240 33.333 0.00 0.00 0.00 5.28
2748 3061 5.361857 CCCGTAACTTAATTCTCCTACTCCA 59.638 44.000 0.00 0.00 0.00 3.86
2757 3070 2.656002 TCTCCTACTCCATCCAGTTCG 58.344 52.381 0.00 0.00 0.00 3.95
2767 3080 2.607187 CATCCAGTTCGCGAGTAAGTT 58.393 47.619 9.59 0.00 0.00 2.66
2768 3081 2.806608 TCCAGTTCGCGAGTAAGTTT 57.193 45.000 9.59 0.00 0.00 2.66
2892 3277 6.261118 GCTTTGTGACTGCCAATATTTAGAG 58.739 40.000 0.00 0.00 0.00 2.43
2985 3371 8.573885 GGTTTTATGCATAAACCCTATTACTCC 58.426 37.037 29.01 15.76 45.63 3.85
2986 3372 8.573885 GTTTTATGCATAAACCCTATTACTCCC 58.426 37.037 27.44 0.70 32.42 4.30
2987 3373 7.642094 TTATGCATAAACCCTATTACTCCCT 57.358 36.000 16.78 0.00 0.00 4.20
2988 3374 5.562298 TGCATAAACCCTATTACTCCCTC 57.438 43.478 0.00 0.00 0.00 4.30
2989 3375 4.349930 TGCATAAACCCTATTACTCCCTCC 59.650 45.833 0.00 0.00 0.00 4.30
2990 3376 4.562963 GCATAAACCCTATTACTCCCTCCG 60.563 50.000 0.00 0.00 0.00 4.63
2991 3377 2.862850 AACCCTATTACTCCCTCCGT 57.137 50.000 0.00 0.00 0.00 4.69
2992 3378 3.979501 AACCCTATTACTCCCTCCGTA 57.020 47.619 0.00 0.00 0.00 4.02
2993 3379 3.979501 ACCCTATTACTCCCTCCGTAA 57.020 47.619 0.00 0.00 0.00 3.18
2994 3380 4.270317 ACCCTATTACTCCCTCCGTAAA 57.730 45.455 0.00 0.00 31.36 2.01
2995 3381 3.963374 ACCCTATTACTCCCTCCGTAAAC 59.037 47.826 0.00 0.00 31.36 2.01
2996 3382 4.221530 CCCTATTACTCCCTCCGTAAACT 58.778 47.826 0.00 0.00 31.36 2.66
2997 3383 5.103515 ACCCTATTACTCCCTCCGTAAACTA 60.104 44.000 0.00 0.00 31.36 2.24
2998 3384 5.835280 CCCTATTACTCCCTCCGTAAACTAA 59.165 44.000 0.00 0.00 31.36 2.24
2999 3385 6.496218 CCCTATTACTCCCTCCGTAAACTAAT 59.504 42.308 0.00 0.00 31.36 1.73
3000 3386 7.671398 CCCTATTACTCCCTCCGTAAACTAATA 59.329 40.741 0.00 0.00 31.36 0.98
3001 3387 9.252635 CCTATTACTCCCTCCGTAAACTAATAT 57.747 37.037 0.00 0.00 31.36 1.28
3005 3391 9.866655 TTACTCCCTCCGTAAACTAATATAAGA 57.133 33.333 0.00 0.00 0.00 2.10
3006 3392 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
3007 3393 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
3008 3394 8.174733 TCCCTCCGTAAACTAATATAAGAGTG 57.825 38.462 0.00 0.00 0.00 3.51
3009 3395 7.781693 TCCCTCCGTAAACTAATATAAGAGTGT 59.218 37.037 0.00 0.00 0.00 3.55
3010 3396 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
3011 3397 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
3059 3445 9.490379 AAACACTCTTACATTAGTTTACAGAGG 57.510 33.333 0.00 0.00 0.00 3.69
3060 3446 7.612677 ACACTCTTACATTAGTTTACAGAGGG 58.387 38.462 0.00 0.00 0.00 4.30
3061 3447 7.453752 ACACTCTTACATTAGTTTACAGAGGGA 59.546 37.037 2.59 0.00 0.00 4.20
3062 3448 7.976734 CACTCTTACATTAGTTTACAGAGGGAG 59.023 40.741 0.00 0.00 0.00 4.30
3148 3563 3.664107 TGTGAACTTCATGGAGTAGTGC 58.336 45.455 7.19 0.00 0.00 4.40
3181 3596 8.677300 GGAAATATAACTGTTGAAGCTGATTGA 58.323 33.333 2.69 0.00 0.00 2.57
3220 3639 3.807622 TGTCATTTCTCACGTTCTGGTTC 59.192 43.478 0.00 0.00 0.00 3.62
3310 3729 3.967332 AATTTTGCCAGGTCAGGATTG 57.033 42.857 0.00 0.00 0.00 2.67
3311 3730 1.631405 TTTTGCCAGGTCAGGATTGG 58.369 50.000 0.00 0.00 35.06 3.16
3315 3734 2.877975 CCAGGTCAGGATTGGCTTG 58.122 57.895 0.00 0.00 35.92 4.01
3409 3904 1.992519 ATGCCTGCTCACTGGATCCC 61.993 60.000 9.90 0.00 37.06 3.85
3527 4250 8.432013 AGGAATACATTGTATGATCACAGCTTA 58.568 33.333 10.01 0.00 0.00 3.09
3540 4266 7.919690 TGATCACAGCTTACTTTATATGTTGC 58.080 34.615 0.00 0.00 0.00 4.17
3572 4298 3.005684 TCGATTCTTTGCTTTGTTGCCAT 59.994 39.130 0.00 0.00 0.00 4.40
3598 4324 4.241590 TGCTTTAGTCATGTTTGGCAAG 57.758 40.909 0.00 0.00 0.00 4.01
3614 4340 6.647334 TTGGCAAGTTTGATAATCTTGTGA 57.353 33.333 0.00 0.00 40.14 3.58
3649 4375 0.101579 TGACAACAGTTGCGTCGAGA 59.898 50.000 13.56 0.00 32.17 4.04
3712 4474 5.518812 TGTTTACACAGACAATTCATGCAC 58.481 37.500 0.00 0.00 0.00 4.57
3904 4668 2.006772 CGCTGATACGGTTCTTGGC 58.993 57.895 0.00 0.00 0.00 4.52
3926 4695 6.149633 GGCATACTCAAAAAGTGTGTAAAGG 58.850 40.000 4.27 0.00 45.95 3.11
3942 4711 9.871238 GTGTGTAAAGGAATTTATCTCTCTGTA 57.129 33.333 0.00 0.00 0.00 2.74
4108 4881 8.211629 GTCAGGTTAGTTATTCCACCATATTCT 58.788 37.037 0.00 0.00 0.00 2.40
4121 4894 7.757526 TCCACCATATTCTTTTTACAACATCG 58.242 34.615 0.00 0.00 0.00 3.84
4122 4895 7.608376 TCCACCATATTCTTTTTACAACATCGA 59.392 33.333 0.00 0.00 0.00 3.59
4123 4896 7.910162 CCACCATATTCTTTTTACAACATCGAG 59.090 37.037 0.00 0.00 0.00 4.04
4124 4897 7.910162 CACCATATTCTTTTTACAACATCGAGG 59.090 37.037 0.00 0.00 0.00 4.63
4125 4898 7.610305 ACCATATTCTTTTTACAACATCGAGGT 59.390 33.333 0.00 0.00 0.00 3.85
4126 4899 8.458843 CCATATTCTTTTTACAACATCGAGGTT 58.541 33.333 10.11 10.11 0.00 3.50
4127 4900 9.840427 CATATTCTTTTTACAACATCGAGGTTT 57.160 29.630 13.60 7.68 0.00 3.27
4129 4902 8.797266 ATTCTTTTTACAACATCGAGGTTTTC 57.203 30.769 13.60 0.00 0.00 2.29
4137 4910 3.650369 CGAGGTTTTCGGGTGGTG 58.350 61.111 0.00 0.00 45.54 4.17
4148 4921 3.647771 GGTGGTGGTGGGGGAGTC 61.648 72.222 0.00 0.00 0.00 3.36
4160 4933 2.284112 GGAGTCGGTGGGTGGGTA 60.284 66.667 0.00 0.00 0.00 3.69
4161 4934 1.688187 GGAGTCGGTGGGTGGGTAT 60.688 63.158 0.00 0.00 0.00 2.73
4162 4935 1.520666 GAGTCGGTGGGTGGGTATG 59.479 63.158 0.00 0.00 0.00 2.39
4163 4936 1.229400 AGTCGGTGGGTGGGTATGT 60.229 57.895 0.00 0.00 0.00 2.29
4164 4937 0.041535 AGTCGGTGGGTGGGTATGTA 59.958 55.000 0.00 0.00 0.00 2.29
4165 4938 1.125633 GTCGGTGGGTGGGTATGTAT 58.874 55.000 0.00 0.00 0.00 2.29
4166 4939 1.124780 TCGGTGGGTGGGTATGTATG 58.875 55.000 0.00 0.00 0.00 2.39
4167 4940 0.834612 CGGTGGGTGGGTATGTATGT 59.165 55.000 0.00 0.00 0.00 2.29
4168 4941 1.202604 CGGTGGGTGGGTATGTATGTC 60.203 57.143 0.00 0.00 0.00 3.06
4169 4942 2.124411 GGTGGGTGGGTATGTATGTCT 58.876 52.381 0.00 0.00 0.00 3.41
4170 4943 2.158813 GGTGGGTGGGTATGTATGTCTG 60.159 54.545 0.00 0.00 0.00 3.51
4171 4944 2.123589 TGGGTGGGTATGTATGTCTGG 58.876 52.381 0.00 0.00 0.00 3.86
4172 4945 1.420138 GGGTGGGTATGTATGTCTGGG 59.580 57.143 0.00 0.00 0.00 4.45
4173 4946 1.202770 GGTGGGTATGTATGTCTGGGC 60.203 57.143 0.00 0.00 0.00 5.36
4174 4947 1.488812 GTGGGTATGTATGTCTGGGCA 59.511 52.381 0.00 0.00 0.00 5.36
4175 4948 1.488812 TGGGTATGTATGTCTGGGCAC 59.511 52.381 0.00 0.00 0.00 5.01
4178 4951 2.485479 GGTATGTATGTCTGGGCACTGG 60.485 54.545 0.00 0.00 0.00 4.00
4179 4952 1.583556 ATGTATGTCTGGGCACTGGA 58.416 50.000 0.00 0.00 0.00 3.86
4180 4953 0.613260 TGTATGTCTGGGCACTGGAC 59.387 55.000 5.85 5.85 0.00 4.02
4188 4961 3.050089 GGGCACTGGACCAAATTCA 57.950 52.632 0.00 0.00 44.16 2.57
4190 4963 1.901833 GGGCACTGGACCAAATTCATT 59.098 47.619 0.00 0.00 44.16 2.57
4192 4965 3.328505 GGCACTGGACCAAATTCATTTG 58.671 45.455 5.42 5.42 45.04 2.32
4193 4966 3.244181 GGCACTGGACCAAATTCATTTGT 60.244 43.478 10.63 0.72 44.21 2.83
4194 4967 4.379652 GCACTGGACCAAATTCATTTGTT 58.620 39.130 10.63 0.00 44.21 2.83
4198 5139 7.173047 GCACTGGACCAAATTCATTTGTTAAAT 59.827 33.333 10.63 0.00 44.21 1.40
4200 5141 7.598493 ACTGGACCAAATTCATTTGTTAAATCG 59.402 33.333 10.63 0.00 44.21 3.34
4228 5288 6.434965 GGGGTATGTACATTTAGTGTTGGTTT 59.565 38.462 14.77 0.00 42.29 3.27
4426 5605 4.633126 GTCTGTATGACATGCATTCTGTGT 59.367 41.667 6.68 0.00 44.73 3.72
4486 5668 1.069823 TGGCGCATTTTGATGTTTGGT 59.930 42.857 10.83 0.00 0.00 3.67
4542 5724 5.230516 GCGGTTCACGTTTTCTTTTGTTATT 59.769 36.000 0.00 0.00 46.52 1.40
4543 5725 6.414402 GCGGTTCACGTTTTCTTTTGTTATTA 59.586 34.615 0.00 0.00 46.52 0.98
4604 5786 1.150536 GGCCAAGGATGCCGGATTA 59.849 57.895 5.05 0.00 39.48 1.75
4739 5921 5.048434 GCTAAAAGAATCAGACAGGTTTGCT 60.048 40.000 0.00 0.00 0.00 3.91
4740 5922 6.149474 GCTAAAAGAATCAGACAGGTTTGCTA 59.851 38.462 0.00 0.00 0.00 3.49
4741 5923 6.959639 AAAAGAATCAGACAGGTTTGCTAA 57.040 33.333 0.00 0.00 0.00 3.09
4743 5925 6.959639 AAGAATCAGACAGGTTTGCTAAAA 57.040 33.333 0.00 0.00 0.00 1.52
4744 5926 6.566197 AGAATCAGACAGGTTTGCTAAAAG 57.434 37.500 0.00 0.00 0.00 2.27
4745 5927 6.299141 AGAATCAGACAGGTTTGCTAAAAGA 58.701 36.000 0.00 0.00 0.00 2.52
4747 5929 7.449704 AGAATCAGACAGGTTTGCTAAAAGAAT 59.550 33.333 0.00 0.00 0.00 2.40
4750 5932 6.205464 TCAGACAGGTTTGCTAAAAGAATCAG 59.795 38.462 0.00 0.00 0.00 2.90
4751 5933 6.205464 CAGACAGGTTTGCTAAAAGAATCAGA 59.795 38.462 0.00 0.00 0.00 3.27
4752 5934 6.205658 AGACAGGTTTGCTAAAAGAATCAGAC 59.794 38.462 0.00 0.00 0.00 3.51
4753 5935 5.827797 ACAGGTTTGCTAAAAGAATCAGACA 59.172 36.000 0.00 0.00 0.00 3.41
4754 5936 6.016777 ACAGGTTTGCTAAAAGAATCAGACAG 60.017 38.462 0.00 0.00 0.00 3.51
4755 5937 5.474876 AGGTTTGCTAAAAGAATCAGACAGG 59.525 40.000 0.00 0.00 0.00 4.00
4757 5939 6.348868 GGTTTGCTAAAAGAATCAGACAGGAG 60.349 42.308 0.00 0.00 0.00 3.69
4829 6015 5.125257 TGTTTGTGCCATGTGGATTATACAG 59.875 40.000 2.55 0.00 37.39 2.74
4855 6041 1.663702 CAAGCCTTGTTGCTGCTGC 60.664 57.895 8.89 8.89 41.80 5.25
4969 6165 8.815565 TCTGTTATCTGTATCTTGAGAAGAGT 57.184 34.615 0.00 0.00 41.61 3.24
4971 6193 9.868277 CTGTTATCTGTATCTTGAGAAGAGTTT 57.132 33.333 0.00 0.00 41.61 2.66
4977 6199 8.952278 TCTGTATCTTGAGAAGAGTTTCTAGTC 58.048 37.037 0.00 0.00 43.63 2.59
4978 6200 8.637196 TGTATCTTGAGAAGAGTTTCTAGTCA 57.363 34.615 0.00 0.00 43.63 3.41
5359 6589 1.747924 TGAAGAGACATCTGAGCCGAG 59.252 52.381 0.00 0.00 35.37 4.63
5368 6603 1.617322 TCTGAGCCGAGTGTACAACT 58.383 50.000 0.00 0.00 43.85 3.16
5373 6608 3.735181 CCGAGTGTACAACTAGGGC 57.265 57.895 0.00 0.00 45.41 5.19
5377 6612 2.280628 GAGTGTACAACTAGGGCATGC 58.719 52.381 9.90 9.90 40.07 4.06
5380 6615 2.169769 GTGTACAACTAGGGCATGCCTA 59.830 50.000 34.70 22.59 36.10 3.93
5413 6648 1.065345 GGGGAGCTTCCTTTGGTAGTC 60.065 57.143 11.94 0.00 36.57 2.59
5427 6662 4.393239 TGGTAGTCTGTGTAGTAGGGTT 57.607 45.455 0.00 0.00 0.00 4.11
5442 6677 1.258676 GGGTTAAACGGCCCATTCAA 58.741 50.000 0.00 0.00 44.23 2.69
5445 6680 3.517602 GGTTAAACGGCCCATTCAATTC 58.482 45.455 0.00 0.00 0.00 2.17
5449 6684 1.247419 ACGGCCCATTCAATTCGCAA 61.247 50.000 0.00 0.00 0.00 4.85
5465 6700 2.423185 TCGCAATGTATTCAAGCCCAAG 59.577 45.455 0.00 0.00 0.00 3.61
5468 6703 3.617045 GCAATGTATTCAAGCCCAAGCAA 60.617 43.478 0.00 0.00 43.56 3.91
5473 6708 2.656947 TTCAAGCCCAAGCAAGTACT 57.343 45.000 0.00 0.00 43.56 2.73
5474 6709 2.185004 TCAAGCCCAAGCAAGTACTC 57.815 50.000 0.00 0.00 43.56 2.59
5475 6710 1.168714 CAAGCCCAAGCAAGTACTCC 58.831 55.000 0.00 0.00 43.56 3.85
5476 6711 0.038310 AAGCCCAAGCAAGTACTCCC 59.962 55.000 0.00 0.00 43.56 4.30
5477 6712 0.842467 AGCCCAAGCAAGTACTCCCT 60.842 55.000 0.00 0.00 43.56 4.20
5478 6713 0.393132 GCCCAAGCAAGTACTCCCTC 60.393 60.000 0.00 0.00 39.53 4.30
5479 6714 0.253327 CCCAAGCAAGTACTCCCTCC 59.747 60.000 0.00 0.00 0.00 4.30
5480 6715 0.984230 CCAAGCAAGTACTCCCTCCA 59.016 55.000 0.00 0.00 0.00 3.86
5481 6716 1.561542 CCAAGCAAGTACTCCCTCCAT 59.438 52.381 0.00 0.00 0.00 3.41
5482 6717 2.420687 CCAAGCAAGTACTCCCTCCATC 60.421 54.545 0.00 0.00 0.00 3.51
5483 6718 1.501582 AGCAAGTACTCCCTCCATCC 58.498 55.000 0.00 0.00 0.00 3.51
5484 6719 0.470341 GCAAGTACTCCCTCCATCCC 59.530 60.000 0.00 0.00 0.00 3.85
5485 6720 1.879575 CAAGTACTCCCTCCATCCCA 58.120 55.000 0.00 0.00 0.00 4.37
5486 6721 2.412591 CAAGTACTCCCTCCATCCCAT 58.587 52.381 0.00 0.00 0.00 4.00
5487 6722 3.587498 CAAGTACTCCCTCCATCCCATA 58.413 50.000 0.00 0.00 0.00 2.74
5488 6723 3.973973 CAAGTACTCCCTCCATCCCATAA 59.026 47.826 0.00 0.00 0.00 1.90
5489 6724 4.510303 AGTACTCCCTCCATCCCATAAT 57.490 45.455 0.00 0.00 0.00 1.28
5490 6725 4.171234 AGTACTCCCTCCATCCCATAATG 58.829 47.826 0.00 0.00 0.00 1.90
5491 6726 3.080660 ACTCCCTCCATCCCATAATGT 57.919 47.619 0.00 0.00 0.00 2.71
5492 6727 4.228237 ACTCCCTCCATCCCATAATGTA 57.772 45.455 0.00 0.00 0.00 2.29
5493 6728 4.577096 ACTCCCTCCATCCCATAATGTAA 58.423 43.478 0.00 0.00 0.00 2.41
5494 6729 4.599241 ACTCCCTCCATCCCATAATGTAAG 59.401 45.833 0.00 0.00 0.00 2.34
5495 6730 4.838403 TCCCTCCATCCCATAATGTAAGA 58.162 43.478 0.00 0.00 0.00 2.10
5496 6731 4.597507 TCCCTCCATCCCATAATGTAAGAC 59.402 45.833 0.00 0.00 0.00 3.01
5497 6732 4.350816 CCCTCCATCCCATAATGTAAGACA 59.649 45.833 0.00 0.00 0.00 3.41
5498 6733 5.014544 CCCTCCATCCCATAATGTAAGACAT 59.985 44.000 0.00 0.00 41.31 3.06
5516 6751 4.966850 ACATTAGTGTCAGAAAACGTCG 57.033 40.909 0.00 0.00 31.41 5.12
5517 6752 4.365723 ACATTAGTGTCAGAAAACGTCGT 58.634 39.130 0.00 0.00 31.41 4.34
5518 6753 5.522456 ACATTAGTGTCAGAAAACGTCGTA 58.478 37.500 0.00 0.00 31.41 3.43
5519 6754 5.400485 ACATTAGTGTCAGAAAACGTCGTAC 59.600 40.000 0.00 0.00 31.41 3.67
5520 6755 3.425577 AGTGTCAGAAAACGTCGTACA 57.574 42.857 0.00 0.00 0.00 2.90
5521 6756 3.973657 AGTGTCAGAAAACGTCGTACAT 58.026 40.909 0.00 0.00 31.23 2.29
5522 6757 4.365723 AGTGTCAGAAAACGTCGTACATT 58.634 39.130 0.00 0.00 31.23 2.71
5523 6758 5.522456 AGTGTCAGAAAACGTCGTACATTA 58.478 37.500 0.00 0.00 31.23 1.90
5524 6759 6.154445 AGTGTCAGAAAACGTCGTACATTAT 58.846 36.000 0.00 0.00 31.23 1.28
5525 6760 6.089016 AGTGTCAGAAAACGTCGTACATTATG 59.911 38.462 0.00 2.74 31.23 1.90
5526 6761 5.346551 TGTCAGAAAACGTCGTACATTATGG 59.653 40.000 0.00 0.00 0.00 2.74
5527 6762 4.865925 TCAGAAAACGTCGTACATTATGGG 59.134 41.667 0.00 0.00 0.00 4.00
5528 6763 4.865925 CAGAAAACGTCGTACATTATGGGA 59.134 41.667 0.00 0.00 0.00 4.37
5529 6764 4.866486 AGAAAACGTCGTACATTATGGGAC 59.134 41.667 0.00 0.69 0.00 4.46
5531 6766 1.762419 CGTCGTACATTATGGGACGG 58.238 55.000 19.97 6.05 44.74 4.79
5532 6767 1.334556 CGTCGTACATTATGGGACGGA 59.665 52.381 19.97 8.10 44.74 4.69
5533 6768 2.603892 CGTCGTACATTATGGGACGGAG 60.604 54.545 19.97 12.16 44.74 4.63
5573 6809 5.346181 TTTTTGGGGTTGAAAGTGTAAGG 57.654 39.130 0.00 0.00 0.00 2.69
5619 6855 2.497138 TGTTGAGTGGCTGTGAGATTG 58.503 47.619 0.00 0.00 0.00 2.67
5630 7095 5.602561 TGGCTGTGAGATTGTATATACTGGT 59.397 40.000 13.89 0.33 0.00 4.00
5646 7111 0.033920 TGGTGACAGCAGTGCAGTAG 59.966 55.000 19.20 6.61 35.01 2.57
5647 7112 0.034059 GGTGACAGCAGTGCAGTAGT 59.966 55.000 19.20 9.99 0.00 2.73
5648 7113 1.272490 GGTGACAGCAGTGCAGTAGTA 59.728 52.381 19.20 2.82 0.00 1.82
5649 7114 2.600731 GTGACAGCAGTGCAGTAGTAG 58.399 52.381 19.20 0.36 0.00 2.57
5650 7115 1.546029 TGACAGCAGTGCAGTAGTAGG 59.454 52.381 19.20 0.00 0.00 3.18
5651 7116 1.546476 GACAGCAGTGCAGTAGTAGGT 59.454 52.381 19.20 1.85 0.00 3.08
5652 7117 1.546476 ACAGCAGTGCAGTAGTAGGTC 59.454 52.381 19.20 0.00 0.00 3.85
5653 7118 1.134965 CAGCAGTGCAGTAGTAGGTCC 60.135 57.143 19.20 0.00 0.00 4.46
5654 7119 1.187087 GCAGTGCAGTAGTAGGTCCT 58.813 55.000 11.09 0.00 0.00 3.85
5655 7120 1.134965 GCAGTGCAGTAGTAGGTCCTG 60.135 57.143 11.09 0.00 0.00 3.86
5656 7121 2.171840 CAGTGCAGTAGTAGGTCCTGT 58.828 52.381 0.00 0.00 0.00 4.00
5657 7122 2.563179 CAGTGCAGTAGTAGGTCCTGTT 59.437 50.000 0.00 0.00 0.00 3.16
5658 7123 2.563179 AGTGCAGTAGTAGGTCCTGTTG 59.437 50.000 0.00 0.00 0.00 3.33
5659 7124 2.561419 GTGCAGTAGTAGGTCCTGTTGA 59.439 50.000 0.00 0.00 0.00 3.18
5660 7125 3.195825 GTGCAGTAGTAGGTCCTGTTGAT 59.804 47.826 0.00 0.00 0.00 2.57
5661 7126 3.838317 TGCAGTAGTAGGTCCTGTTGATT 59.162 43.478 0.00 0.00 0.00 2.57
5668 7133 5.091552 AGTAGGTCCTGTTGATTCCTGTTA 58.908 41.667 0.00 0.00 0.00 2.41
5676 7141 6.070995 TCCTGTTGATTCCTGTTACGTATCTT 60.071 38.462 0.00 0.00 0.00 2.40
5677 7142 6.255887 CCTGTTGATTCCTGTTACGTATCTTC 59.744 42.308 0.00 0.00 0.00 2.87
5682 7150 7.782049 TGATTCCTGTTACGTATCTTCATCTT 58.218 34.615 0.00 0.00 0.00 2.40
5683 7151 7.706607 TGATTCCTGTTACGTATCTTCATCTTG 59.293 37.037 0.00 0.00 0.00 3.02
5686 7154 8.058667 TCCTGTTACGTATCTTCATCTTGTAA 57.941 34.615 0.00 0.00 0.00 2.41
5695 7163 8.759641 CGTATCTTCATCTTGTAAATGGAAGAG 58.240 37.037 0.00 0.00 31.83 2.85
5703 7171 7.724305 TCTTGTAAATGGAAGAGTGTAACAC 57.276 36.000 0.00 0.00 41.43 3.32
5711 7179 0.879765 AGAGTGTAACACGTCCTCCG 59.120 55.000 0.00 0.00 41.43 4.63
5763 7231 0.676782 AAGCCCCGAAATCTTCCGTG 60.677 55.000 0.00 0.00 0.00 4.94
5768 7236 1.090052 CCGAAATCTTCCGTGCTCCC 61.090 60.000 0.00 0.00 0.00 4.30
5790 7258 3.200593 GCCAGCACCGATCAGCAG 61.201 66.667 4.84 0.00 0.00 4.24
5836 7304 0.549950 ATGATAAGCTGCCTGCCTGT 59.450 50.000 0.00 0.00 44.23 4.00
5885 7367 2.129555 TTGAGCAGTCTCCCCTTGCC 62.130 60.000 0.00 0.00 38.58 4.52
5895 7378 1.073199 CCCCTTGCCCATCCGTATC 59.927 63.158 0.00 0.00 0.00 2.24
5905 7388 3.066760 GCCCATCCGTATCTTTTTCCTTG 59.933 47.826 0.00 0.00 0.00 3.61
5909 7392 3.606687 TCCGTATCTTTTTCCTTGGAGC 58.393 45.455 0.00 0.00 0.00 4.70
5939 7422 2.357952 GACACCCCAAAAGAGTGTTGTC 59.642 50.000 0.00 0.00 44.45 3.18
6012 7500 2.797515 GTGGTCGACTTCACGTCAG 58.202 57.895 16.46 0.00 42.98 3.51
6059 7977 2.481449 GCCAATACGTCCGTGATCTCTT 60.481 50.000 1.98 0.00 0.00 2.85
6111 8029 8.793592 GGTCTTGACTAAATTGTCCAAACTAAT 58.206 33.333 0.61 0.00 36.21 1.73
6114 8032 9.965824 CTTGACTAAATTGTCCAAACTAATTGT 57.034 29.630 0.00 0.00 37.32 2.71
6115 8033 9.959749 TTGACTAAATTGTCCAAACTAATTGTC 57.040 29.630 0.00 0.00 37.32 3.18
6116 8034 8.286800 TGACTAAATTGTCCAAACTAATTGTCG 58.713 33.333 0.00 0.00 37.32 4.35
6117 8035 8.385898 ACTAAATTGTCCAAACTAATTGTCGA 57.614 30.769 0.00 0.00 37.32 4.20
6118 8036 8.842280 ACTAAATTGTCCAAACTAATTGTCGAA 58.158 29.630 0.00 0.00 37.32 3.71
6119 8037 9.329913 CTAAATTGTCCAAACTAATTGTCGAAG 57.670 33.333 0.00 0.00 37.32 3.79
6120 8038 4.742438 TGTCCAAACTAATTGTCGAAGC 57.258 40.909 0.00 0.00 37.32 3.86
6121 8039 4.385825 TGTCCAAACTAATTGTCGAAGCT 58.614 39.130 0.00 0.00 37.32 3.74
6122 8040 5.543714 TGTCCAAACTAATTGTCGAAGCTA 58.456 37.500 0.00 0.00 37.32 3.32
6123 8041 5.992829 TGTCCAAACTAATTGTCGAAGCTAA 59.007 36.000 0.00 0.00 37.32 3.09
6124 8042 6.653320 TGTCCAAACTAATTGTCGAAGCTAAT 59.347 34.615 0.00 0.00 37.32 1.73
6125 8043 7.820386 TGTCCAAACTAATTGTCGAAGCTAATA 59.180 33.333 0.00 0.00 37.32 0.98
6126 8044 8.662141 GTCCAAACTAATTGTCGAAGCTAATAA 58.338 33.333 0.00 0.00 37.32 1.40
6127 8045 9.391006 TCCAAACTAATTGTCGAAGCTAATAAT 57.609 29.630 0.00 0.00 37.32 1.28
6136 8054 8.896320 TTGTCGAAGCTAATAATAATAAGGCA 57.104 30.769 0.00 0.00 0.00 4.75
6137 8055 8.306680 TGTCGAAGCTAATAATAATAAGGCAC 57.693 34.615 0.00 0.00 0.00 5.01
6138 8056 7.929245 TGTCGAAGCTAATAATAATAAGGCACA 59.071 33.333 0.00 0.00 0.00 4.57
6139 8057 8.770828 GTCGAAGCTAATAATAATAAGGCACAA 58.229 33.333 0.00 0.00 0.00 3.33
6140 8058 8.988934 TCGAAGCTAATAATAATAAGGCACAAG 58.011 33.333 0.00 0.00 0.00 3.16
6141 8059 8.774586 CGAAGCTAATAATAATAAGGCACAAGT 58.225 33.333 0.00 0.00 0.00 3.16
6142 8060 9.884465 GAAGCTAATAATAATAAGGCACAAGTG 57.116 33.333 0.00 0.00 0.00 3.16
6153 8071 2.924185 CACAAGTGCTCTGGAGTGG 58.076 57.895 0.00 0.00 0.00 4.00
6154 8072 0.394192 CACAAGTGCTCTGGAGTGGA 59.606 55.000 0.00 0.00 0.00 4.02
6155 8073 1.131638 ACAAGTGCTCTGGAGTGGAA 58.868 50.000 0.00 0.00 0.00 3.53
6156 8074 1.490490 ACAAGTGCTCTGGAGTGGAAA 59.510 47.619 0.00 0.00 0.00 3.13
6157 8075 2.107204 ACAAGTGCTCTGGAGTGGAAAT 59.893 45.455 0.00 0.00 0.00 2.17
6158 8076 3.152341 CAAGTGCTCTGGAGTGGAAATT 58.848 45.455 0.00 0.00 0.00 1.82
6159 8077 4.202461 ACAAGTGCTCTGGAGTGGAAATTA 60.202 41.667 0.00 0.00 0.00 1.40
6160 8078 4.213564 AGTGCTCTGGAGTGGAAATTAG 57.786 45.455 0.00 0.00 0.00 1.73
6161 8079 2.680339 GTGCTCTGGAGTGGAAATTAGC 59.320 50.000 0.00 0.00 0.00 3.09
6162 8080 2.573462 TGCTCTGGAGTGGAAATTAGCT 59.427 45.455 0.00 0.00 0.00 3.32
6163 8081 3.774766 TGCTCTGGAGTGGAAATTAGCTA 59.225 43.478 0.00 0.00 0.00 3.32
6164 8082 4.141846 TGCTCTGGAGTGGAAATTAGCTAG 60.142 45.833 0.00 0.00 0.00 3.42
6165 8083 4.100189 GCTCTGGAGTGGAAATTAGCTAGA 59.900 45.833 0.00 0.00 0.00 2.43
6166 8084 5.596845 CTCTGGAGTGGAAATTAGCTAGAC 58.403 45.833 0.00 0.00 0.00 2.59
6167 8085 5.023452 TCTGGAGTGGAAATTAGCTAGACA 58.977 41.667 0.00 0.00 0.00 3.41
6168 8086 5.483937 TCTGGAGTGGAAATTAGCTAGACAA 59.516 40.000 0.00 0.00 0.00 3.18
6169 8087 6.156949 TCTGGAGTGGAAATTAGCTAGACAAT 59.843 38.462 0.00 0.00 0.00 2.71
6170 8088 7.344612 TCTGGAGTGGAAATTAGCTAGACAATA 59.655 37.037 0.00 0.00 0.00 1.90
6171 8089 7.500992 TGGAGTGGAAATTAGCTAGACAATAG 58.499 38.462 0.00 0.00 0.00 1.73
6172 8090 6.425417 GGAGTGGAAATTAGCTAGACAATAGC 59.575 42.308 0.00 0.00 40.67 2.97
6173 8091 6.292150 AGTGGAAATTAGCTAGACAATAGCC 58.708 40.000 3.35 0.00 41.25 3.93
6174 8092 6.055588 GTGGAAATTAGCTAGACAATAGCCA 58.944 40.000 3.35 0.86 41.25 4.75
6175 8093 6.017852 GTGGAAATTAGCTAGACAATAGCCAC 60.018 42.308 16.41 16.41 41.25 5.01
6176 8094 5.177696 GGAAATTAGCTAGACAATAGCCACG 59.822 44.000 3.35 0.00 41.25 4.94
6177 8095 4.939052 ATTAGCTAGACAATAGCCACGT 57.061 40.909 3.35 0.00 41.25 4.49
6178 8096 2.586258 AGCTAGACAATAGCCACGTG 57.414 50.000 9.08 9.08 41.25 4.49
6179 8097 1.137086 AGCTAGACAATAGCCACGTGG 59.863 52.381 30.66 30.66 41.25 4.94
6180 8098 1.134788 GCTAGACAATAGCCACGTGGT 60.135 52.381 33.92 22.69 37.57 4.16
6181 8099 2.540515 CTAGACAATAGCCACGTGGTG 58.459 52.381 33.92 25.73 37.57 4.17
6193 8111 2.673833 CACGTGGTGGACTAAAGAGAC 58.326 52.381 7.95 0.00 0.00 3.36
6194 8112 2.035449 CACGTGGTGGACTAAAGAGACA 59.965 50.000 7.95 0.00 0.00 3.41
6195 8113 2.696707 ACGTGGTGGACTAAAGAGACAA 59.303 45.455 0.00 0.00 0.00 3.18
6196 8114 3.323979 ACGTGGTGGACTAAAGAGACAAT 59.676 43.478 0.00 0.00 0.00 2.71
6197 8115 4.525487 ACGTGGTGGACTAAAGAGACAATA 59.475 41.667 0.00 0.00 0.00 1.90
6198 8116 4.863131 CGTGGTGGACTAAAGAGACAATAC 59.137 45.833 0.00 0.00 0.00 1.89
6199 8117 5.336531 CGTGGTGGACTAAAGAGACAATACT 60.337 44.000 0.00 0.00 0.00 2.12
6200 8118 6.127814 CGTGGTGGACTAAAGAGACAATACTA 60.128 42.308 0.00 0.00 0.00 1.82
6201 8119 7.416438 CGTGGTGGACTAAAGAGACAATACTAT 60.416 40.741 0.00 0.00 0.00 2.12
6202 8120 7.707035 GTGGTGGACTAAAGAGACAATACTATG 59.293 40.741 0.00 0.00 0.00 2.23
6203 8121 7.399191 TGGTGGACTAAAGAGACAATACTATGT 59.601 37.037 0.00 0.00 35.90 2.29
6204 8122 8.258708 GGTGGACTAAAGAGACAATACTATGTT 58.741 37.037 0.00 0.00 32.57 2.71
6212 8130 8.934507 AAGAGACAATACTATGTTAGAGCAAC 57.065 34.615 0.00 0.00 37.67 4.17
6213 8131 8.299990 AGAGACAATACTATGTTAGAGCAACT 57.700 34.615 0.00 0.00 38.05 3.16
6214 8132 8.754080 AGAGACAATACTATGTTAGAGCAACTT 58.246 33.333 0.00 0.00 38.05 2.66
6215 8133 9.372369 GAGACAATACTATGTTAGAGCAACTTT 57.628 33.333 0.00 0.00 38.05 2.66
6218 8136 9.099454 ACAATACTATGTTAGAGCAACTTTAGC 57.901 33.333 0.00 0.00 38.05 3.09
6219 8137 9.098355 CAATACTATGTTAGAGCAACTTTAGCA 57.902 33.333 0.00 0.00 38.05 3.49
6220 8138 8.879342 ATACTATGTTAGAGCAACTTTAGCAG 57.121 34.615 0.00 0.00 38.05 4.24
6221 8139 6.936279 ACTATGTTAGAGCAACTTTAGCAGA 58.064 36.000 0.00 0.00 38.05 4.26
6222 8140 7.560368 ACTATGTTAGAGCAACTTTAGCAGAT 58.440 34.615 0.00 0.00 38.05 2.90
6223 8141 6.917217 ATGTTAGAGCAACTTTAGCAGATC 57.083 37.500 0.00 0.00 38.05 2.75
6224 8142 5.178797 TGTTAGAGCAACTTTAGCAGATCC 58.821 41.667 0.00 0.00 38.05 3.36
6225 8143 3.274095 AGAGCAACTTTAGCAGATCCC 57.726 47.619 0.00 0.00 0.00 3.85
6226 8144 2.843113 AGAGCAACTTTAGCAGATCCCT 59.157 45.455 0.00 0.00 0.00 4.20
6227 8145 3.265479 AGAGCAACTTTAGCAGATCCCTT 59.735 43.478 0.00 0.00 0.00 3.95
6228 8146 4.471386 AGAGCAACTTTAGCAGATCCCTTA 59.529 41.667 0.00 0.00 0.00 2.69
6229 8147 5.131809 AGAGCAACTTTAGCAGATCCCTTAT 59.868 40.000 0.00 0.00 0.00 1.73
6230 8148 6.327626 AGAGCAACTTTAGCAGATCCCTTATA 59.672 38.462 0.00 0.00 0.00 0.98
6231 8149 6.900194 AGCAACTTTAGCAGATCCCTTATAA 58.100 36.000 0.00 0.00 0.00 0.98
6232 8150 7.521669 AGCAACTTTAGCAGATCCCTTATAAT 58.478 34.615 0.00 0.00 0.00 1.28
6233 8151 7.663493 AGCAACTTTAGCAGATCCCTTATAATC 59.337 37.037 0.00 0.00 0.00 1.75
6234 8152 7.663493 GCAACTTTAGCAGATCCCTTATAATCT 59.337 37.037 0.00 0.00 32.44 2.40
6235 8153 9.566432 CAACTTTAGCAGATCCCTTATAATCTT 57.434 33.333 0.00 0.00 29.77 2.40
6236 8154 9.566432 AACTTTAGCAGATCCCTTATAATCTTG 57.434 33.333 0.00 0.00 29.77 3.02
6237 8155 8.718656 ACTTTAGCAGATCCCTTATAATCTTGT 58.281 33.333 0.00 0.00 29.77 3.16
6239 8157 9.998106 TTTAGCAGATCCCTTATAATCTTGTAC 57.002 33.333 0.00 0.00 29.77 2.90
6240 8158 7.010339 AGCAGATCCCTTATAATCTTGTACC 57.990 40.000 0.00 0.00 29.77 3.34
6241 8159 5.869888 GCAGATCCCTTATAATCTTGTACCG 59.130 44.000 0.00 0.00 29.77 4.02
6242 8160 6.518537 GCAGATCCCTTATAATCTTGTACCGT 60.519 42.308 0.00 0.00 29.77 4.83
6243 8161 6.868864 CAGATCCCTTATAATCTTGTACCGTG 59.131 42.308 0.00 0.00 29.77 4.94
6244 8162 6.781014 AGATCCCTTATAATCTTGTACCGTGA 59.219 38.462 0.00 0.00 0.00 4.35
6245 8163 6.795144 TCCCTTATAATCTTGTACCGTGAA 57.205 37.500 0.00 0.00 0.00 3.18
6246 8164 7.185318 TCCCTTATAATCTTGTACCGTGAAA 57.815 36.000 0.00 0.00 0.00 2.69
6247 8165 7.798071 TCCCTTATAATCTTGTACCGTGAAAT 58.202 34.615 0.00 0.00 0.00 2.17
6248 8166 8.269317 TCCCTTATAATCTTGTACCGTGAAATT 58.731 33.333 0.00 0.00 0.00 1.82
6249 8167 8.342634 CCCTTATAATCTTGTACCGTGAAATTG 58.657 37.037 0.00 0.00 0.00 2.32
6250 8168 9.104965 CCTTATAATCTTGTACCGTGAAATTGA 57.895 33.333 0.00 0.00 0.00 2.57
6256 8174 7.731882 TCTTGTACCGTGAAATTGATTTACA 57.268 32.000 0.00 0.00 0.00 2.41
6257 8175 7.802738 TCTTGTACCGTGAAATTGATTTACAG 58.197 34.615 0.00 0.00 0.00 2.74
6258 8176 6.489127 TGTACCGTGAAATTGATTTACAGG 57.511 37.500 0.00 0.00 0.00 4.00
6259 8177 5.413213 TGTACCGTGAAATTGATTTACAGGG 59.587 40.000 16.78 16.78 37.99 4.45
6260 8178 4.403734 ACCGTGAAATTGATTTACAGGGT 58.596 39.130 17.54 17.54 38.98 4.34
6261 8179 4.217550 ACCGTGAAATTGATTTACAGGGTG 59.782 41.667 19.97 7.29 40.36 4.61
6262 8180 4.380444 CCGTGAAATTGATTTACAGGGTGG 60.380 45.833 13.45 0.00 33.42 4.61
6263 8181 4.457603 CGTGAAATTGATTTACAGGGTGGA 59.542 41.667 0.00 0.00 0.00 4.02
6264 8182 5.391950 CGTGAAATTGATTTACAGGGTGGAG 60.392 44.000 0.00 0.00 0.00 3.86
6265 8183 5.476945 GTGAAATTGATTTACAGGGTGGAGT 59.523 40.000 0.00 0.00 0.00 3.85
6266 8184 6.657541 GTGAAATTGATTTACAGGGTGGAGTA 59.342 38.462 0.00 0.00 0.00 2.59
6267 8185 6.884295 TGAAATTGATTTACAGGGTGGAGTAG 59.116 38.462 0.00 0.00 0.00 2.57
6268 8186 4.837093 TTGATTTACAGGGTGGAGTAGG 57.163 45.455 0.00 0.00 0.00 3.18
6269 8187 4.069312 TGATTTACAGGGTGGAGTAGGA 57.931 45.455 0.00 0.00 0.00 2.94
6270 8188 3.773119 TGATTTACAGGGTGGAGTAGGAC 59.227 47.826 0.00 0.00 0.00 3.85
6271 8189 3.263369 TTTACAGGGTGGAGTAGGACA 57.737 47.619 0.00 0.00 0.00 4.02
6272 8190 3.484953 TTACAGGGTGGAGTAGGACAT 57.515 47.619 0.00 0.00 0.00 3.06
6273 8191 1.573108 ACAGGGTGGAGTAGGACATG 58.427 55.000 0.00 0.00 0.00 3.21
6274 8192 0.833287 CAGGGTGGAGTAGGACATGG 59.167 60.000 0.00 0.00 0.00 3.66
6275 8193 0.326618 AGGGTGGAGTAGGACATGGG 60.327 60.000 0.00 0.00 0.00 4.00
6276 8194 0.326238 GGGTGGAGTAGGACATGGGA 60.326 60.000 0.00 0.00 0.00 4.37
6277 8195 0.831307 GGTGGAGTAGGACATGGGAC 59.169 60.000 0.00 0.00 0.00 4.46
6292 8210 4.760047 GACACGAGGCGCCACCAT 62.760 66.667 31.54 7.63 43.14 3.55
6293 8211 4.760047 ACACGAGGCGCCACCATC 62.760 66.667 31.54 16.69 43.14 3.51
6294 8212 4.457496 CACGAGGCGCCACCATCT 62.457 66.667 31.54 6.18 43.14 2.90
6295 8213 4.148825 ACGAGGCGCCACCATCTC 62.149 66.667 31.54 15.45 43.14 2.75
6296 8214 4.899239 CGAGGCGCCACCATCTCC 62.899 72.222 31.54 5.67 43.14 3.71
6297 8215 4.554036 GAGGCGCCACCATCTCCC 62.554 72.222 31.54 0.00 43.14 4.30
6303 8221 3.402681 CCACCATCTCCCGTGCCT 61.403 66.667 0.00 0.00 0.00 4.75
6304 8222 2.671070 CACCATCTCCCGTGCCTT 59.329 61.111 0.00 0.00 0.00 4.35
6305 8223 1.622607 CCACCATCTCCCGTGCCTTA 61.623 60.000 0.00 0.00 0.00 2.69
6306 8224 0.462047 CACCATCTCCCGTGCCTTAC 60.462 60.000 0.00 0.00 0.00 2.34
6307 8225 0.617820 ACCATCTCCCGTGCCTTACT 60.618 55.000 0.00 0.00 0.00 2.24
6308 8226 0.105039 CCATCTCCCGTGCCTTACTC 59.895 60.000 0.00 0.00 0.00 2.59
6309 8227 1.115467 CATCTCCCGTGCCTTACTCT 58.885 55.000 0.00 0.00 0.00 3.24
6310 8228 1.482593 CATCTCCCGTGCCTTACTCTT 59.517 52.381 0.00 0.00 0.00 2.85
6311 8229 1.640917 TCTCCCGTGCCTTACTCTTT 58.359 50.000 0.00 0.00 0.00 2.52
6312 8230 1.549170 TCTCCCGTGCCTTACTCTTTC 59.451 52.381 0.00 0.00 0.00 2.62
6319 8237 2.095364 GTGCCTTACTCTTTCTCGTCGA 60.095 50.000 0.00 0.00 0.00 4.20
6321 8239 3.005050 TGCCTTACTCTTTCTCGTCGAAA 59.995 43.478 0.00 3.42 39.23 3.46
6325 8243 3.984508 ACTCTTTCTCGTCGAAACTCA 57.015 42.857 0.00 0.00 36.72 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 5.162715 ACATCTTCTCCCCATAGGAAGGATA 60.163 44.000 0.00 0.00 46.94 2.59
90 93 2.579624 TAAGGCCCTAGAATCCCACA 57.420 50.000 0.00 0.00 0.00 4.17
96 100 4.349342 CAGAACTCCATAAGGCCCTAGAAT 59.651 45.833 0.00 0.00 33.74 2.40
101 105 1.216990 CCAGAACTCCATAAGGCCCT 58.783 55.000 0.00 0.00 33.74 5.19
188 192 3.119319 TGCCCTGAATGTTGGGTAGATA 58.881 45.455 0.00 0.00 45.06 1.98
192 196 1.922447 AGATGCCCTGAATGTTGGGTA 59.078 47.619 0.00 0.00 45.06 3.69
308 317 3.889196 TGAATTTCGAACTTGAACCCG 57.111 42.857 5.38 0.00 0.00 5.28
379 390 4.733077 TCACCTTCCAATTTCCCTAACA 57.267 40.909 0.00 0.00 0.00 2.41
425 437 2.100749 GCCTAACCCACAATGGCATTAC 59.899 50.000 13.23 0.00 42.79 1.89
426 439 2.383855 GCCTAACCCACAATGGCATTA 58.616 47.619 13.23 0.00 42.79 1.90
492 513 1.446272 GGAACGTCTGGAAGCTCCG 60.446 63.158 0.00 0.00 40.17 4.63
513 534 1.896220 ATCTGTTCGCCAGCAGAAAA 58.104 45.000 1.47 0.00 43.79 2.29
530 551 3.670991 GTCTGACGCCGAATGAATCTATC 59.329 47.826 0.00 0.00 0.00 2.08
593 689 7.555554 GCAGTCCTCCATAAAATGCATATCTAT 59.444 37.037 0.00 0.00 32.58 1.98
657 753 6.812656 TCAAATGATGTCCATAAACAACATGC 59.187 34.615 0.00 0.00 40.49 4.06
713 892 6.483974 AGCAATAAGATCTGCTTGAAGAGATG 59.516 38.462 17.44 1.39 46.71 2.90
780 1006 7.835181 ACAGTACTTTAGGTTGTATCTCTAGCT 59.165 37.037 0.00 0.00 34.48 3.32
1111 1354 7.939039 GGTAGATGGATGAAAACAGGATCAATA 59.061 37.037 0.00 0.00 0.00 1.90
1302 1547 4.235360 AGATCCAAGTAACTCGACAAACG 58.765 43.478 0.00 0.00 44.09 3.60
1755 2013 6.349973 ACACGATTACTATGCAAACAGATG 57.650 37.500 0.00 0.00 0.00 2.90
1774 2034 9.726034 GAAATGCAAGACATAAAATAAAACACG 57.274 29.630 0.00 0.00 38.34 4.49
1873 2138 4.027572 TGCAGATTTAACGCTAATTGGC 57.972 40.909 3.26 3.26 0.00 4.52
1930 2202 1.982913 GTCGGCGTTGGCATTAAAAAG 59.017 47.619 6.85 0.00 42.47 2.27
1939 2211 0.096454 GATAACAAGTCGGCGTTGGC 59.904 55.000 6.85 0.00 38.90 4.52
2006 2280 7.981789 TGCAAACTACCACTTGATATAGAAGAG 59.018 37.037 0.00 0.00 0.00 2.85
2045 2319 4.924305 ATTGTCAACACAAAGCTGATGT 57.076 36.364 0.00 0.00 45.78 3.06
2116 2393 8.454106 ACAGTGCTCTATGAAATAATGAACAAC 58.546 33.333 0.00 0.00 0.00 3.32
2139 2416 7.194607 TCTTCTGCAAAGACATAAGAAACAG 57.805 36.000 7.09 0.00 31.93 3.16
2503 2801 6.878923 AGCAACTTCACTATTAATGCTACACA 59.121 34.615 0.00 0.00 40.56 3.72
2519 2817 3.636764 TGAGTACTGAGTCAGCAACTTCA 59.363 43.478 22.83 19.01 38.74 3.02
2650 2956 6.802348 GTGCATAGTACATACTCACCTTATCG 59.198 42.308 0.00 0.00 37.73 2.92
2675 2988 7.672983 TTTCTTTCCAAAGAGCAGTGTATAG 57.327 36.000 2.13 0.00 45.01 1.31
2680 2993 5.745769 GTCTTTTTCTTTCCAAAGAGCAGTG 59.254 40.000 2.13 0.00 45.01 3.66
2681 2994 5.654209 AGTCTTTTTCTTTCCAAAGAGCAGT 59.346 36.000 2.13 0.00 45.01 4.40
2702 3015 9.538508 ACGGGTACTAAAATATGATTAACAGTC 57.461 33.333 0.00 0.00 0.00 3.51
2727 3040 8.019656 TGGATGGAGTAGGAGAATTAAGTTAC 57.980 38.462 0.00 0.00 0.00 2.50
2748 3061 3.314541 AAACTTACTCGCGAACTGGAT 57.685 42.857 11.33 0.00 0.00 3.41
2757 3070 6.806120 ATGTTCAAAACAAAACTTACTCGC 57.194 33.333 0.00 0.00 45.86 5.03
2768 3081 9.515020 GTTTGACTGAAGATATGTTCAAAACAA 57.485 29.630 23.35 20.09 45.86 2.83
2827 3212 1.068541 GGTCATGTCCCAAAGCGAAAC 60.069 52.381 0.00 0.00 0.00 2.78
2972 3358 2.862850 ACGGAGGGAGTAATAGGGTT 57.137 50.000 0.00 0.00 0.00 4.11
2980 3366 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
2981 3367 8.003629 ACTCTTATATTAGTTTACGGAGGGAGT 58.996 37.037 0.00 0.00 0.00 3.85
2982 3368 8.298140 CACTCTTATATTAGTTTACGGAGGGAG 58.702 40.741 0.00 0.00 0.00 4.30
2983 3369 7.781693 ACACTCTTATATTAGTTTACGGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
2984 3370 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
2985 3371 9.813446 AAACACTCTTATATTAGTTTACGGAGG 57.187 33.333 0.00 0.00 0.00 4.30
3033 3419 9.490379 CCTCTGTAAACTAATGTAAGAGTGTTT 57.510 33.333 0.00 0.00 0.00 2.83
3034 3420 8.095169 CCCTCTGTAAACTAATGTAAGAGTGTT 58.905 37.037 0.00 0.00 0.00 3.32
3035 3421 7.453752 TCCCTCTGTAAACTAATGTAAGAGTGT 59.546 37.037 0.00 0.00 0.00 3.55
3036 3422 7.837863 TCCCTCTGTAAACTAATGTAAGAGTG 58.162 38.462 0.00 0.00 0.00 3.51
3037 3423 7.674772 ACTCCCTCTGTAAACTAATGTAAGAGT 59.325 37.037 0.00 0.00 0.00 3.24
3038 3424 8.068892 ACTCCCTCTGTAAACTAATGTAAGAG 57.931 38.462 0.00 0.00 0.00 2.85
3039 3425 8.964772 GTACTCCCTCTGTAAACTAATGTAAGA 58.035 37.037 0.00 0.00 0.00 2.10
3040 3426 8.746530 TGTACTCCCTCTGTAAACTAATGTAAG 58.253 37.037 0.00 0.00 0.00 2.34
3041 3427 8.654485 TGTACTCCCTCTGTAAACTAATGTAA 57.346 34.615 0.00 0.00 0.00 2.41
3042 3428 8.654485 TTGTACTCCCTCTGTAAACTAATGTA 57.346 34.615 0.00 0.00 0.00 2.29
3043 3429 7.549147 TTGTACTCCCTCTGTAAACTAATGT 57.451 36.000 0.00 0.00 0.00 2.71
3044 3430 9.449719 AATTTGTACTCCCTCTGTAAACTAATG 57.550 33.333 0.00 0.00 0.00 1.90
3047 3433 9.317827 ACTAATTTGTACTCCCTCTGTAAACTA 57.682 33.333 0.00 0.00 0.00 2.24
3048 3434 8.203681 ACTAATTTGTACTCCCTCTGTAAACT 57.796 34.615 0.00 0.00 0.00 2.66
3049 3435 8.718734 CAACTAATTTGTACTCCCTCTGTAAAC 58.281 37.037 0.00 0.00 0.00 2.01
3050 3436 8.842358 CAACTAATTTGTACTCCCTCTGTAAA 57.158 34.615 0.00 0.00 0.00 2.01
3148 3563 8.915654 GCTTCAACAGTTATATTTCCTTGTTTG 58.084 33.333 0.00 0.00 0.00 2.93
3220 3639 3.138304 TGTCAAATTCCTGACCAGTTCG 58.862 45.455 7.62 0.00 44.30 3.95
3310 3729 4.773323 AAAGCAAAGTGAGATACAAGCC 57.227 40.909 0.00 0.00 0.00 4.35
3311 3730 5.626955 GTGAAAAGCAAAGTGAGATACAAGC 59.373 40.000 0.00 0.00 0.00 4.01
3314 3733 6.542005 TGAAGTGAAAAGCAAAGTGAGATACA 59.458 34.615 0.00 0.00 0.00 2.29
3315 3734 6.853362 GTGAAGTGAAAAGCAAAGTGAGATAC 59.147 38.462 0.00 0.00 0.00 2.24
3355 3848 6.952773 AACTGCAAAGTTACAACAATAGGA 57.047 33.333 0.00 0.00 0.00 2.94
3409 3904 3.855689 AATCCAAGACCGCAGATTTTG 57.144 42.857 0.00 0.00 0.00 2.44
3572 4298 5.300539 TGCCAAACATGACTAAAGCAAAGTA 59.699 36.000 0.00 0.00 0.00 2.24
3598 4324 6.560253 ACACCAGTCACAAGATTATCAAAC 57.440 37.500 0.00 0.00 0.00 2.93
3614 4340 2.098614 TGTCACAATGCAAACACCAGT 58.901 42.857 0.00 0.00 0.00 4.00
3649 4375 4.223700 TGGCAACTTGATAGAGAGACATGT 59.776 41.667 0.00 0.00 37.61 3.21
3712 4474 3.623060 CCAGAGAAAATATGACGGGTGTG 59.377 47.826 0.00 0.00 0.00 3.82
3904 4668 9.965824 AATTCCTTTACACACTTTTTGAGTATG 57.034 29.630 0.00 0.00 38.76 2.39
3926 4695 9.113838 TCAGGCAAATTACAGAGAGATAAATTC 57.886 33.333 0.00 0.00 0.00 2.17
3931 4700 7.129457 ACATCAGGCAAATTACAGAGAGATA 57.871 36.000 0.00 0.00 0.00 1.98
3938 4707 6.149973 TGAGAAGAACATCAGGCAAATTACAG 59.850 38.462 0.00 0.00 0.00 2.74
3942 4711 5.319453 TCTGAGAAGAACATCAGGCAAATT 58.681 37.500 2.63 0.00 42.62 1.82
3977 4747 6.537301 CACTAATCTGGGTAAAGCGAATAACA 59.463 38.462 0.00 0.00 0.00 2.41
3978 4748 6.018180 CCACTAATCTGGGTAAAGCGAATAAC 60.018 42.308 0.00 0.00 0.00 1.89
4121 4894 1.149854 ACCACCACCCGAAAACCTC 59.850 57.895 0.00 0.00 0.00 3.85
4122 4895 1.152839 CACCACCACCCGAAAACCT 60.153 57.895 0.00 0.00 0.00 3.50
4123 4896 2.197605 CCACCACCACCCGAAAACC 61.198 63.158 0.00 0.00 0.00 3.27
4124 4897 2.197605 CCCACCACCACCCGAAAAC 61.198 63.158 0.00 0.00 0.00 2.43
4125 4898 2.196229 CCCACCACCACCCGAAAA 59.804 61.111 0.00 0.00 0.00 2.29
4126 4899 3.892162 CCCCACCACCACCCGAAA 61.892 66.667 0.00 0.00 0.00 3.46
4131 4904 3.647771 GACTCCCCCACCACCACC 61.648 72.222 0.00 0.00 0.00 4.61
4132 4905 4.016706 CGACTCCCCCACCACCAC 62.017 72.222 0.00 0.00 0.00 4.16
4135 4908 4.016706 CACCGACTCCCCCACCAC 62.017 72.222 0.00 0.00 0.00 4.16
4145 4918 0.041535 TACATACCCACCCACCGACT 59.958 55.000 0.00 0.00 0.00 4.18
4148 4921 0.834612 ACATACATACCCACCCACCG 59.165 55.000 0.00 0.00 0.00 4.94
4151 4924 2.123589 CCAGACATACATACCCACCCA 58.876 52.381 0.00 0.00 0.00 4.51
4156 4929 1.768870 AGTGCCCAGACATACATACCC 59.231 52.381 0.00 0.00 0.00 3.69
4157 4930 2.485479 CCAGTGCCCAGACATACATACC 60.485 54.545 0.00 0.00 0.00 2.73
4158 4931 2.434336 TCCAGTGCCCAGACATACATAC 59.566 50.000 0.00 0.00 0.00 2.39
4160 4933 1.210478 GTCCAGTGCCCAGACATACAT 59.790 52.381 0.00 0.00 0.00 2.29
4161 4934 0.613260 GTCCAGTGCCCAGACATACA 59.387 55.000 0.00 0.00 0.00 2.29
4162 4935 0.107654 GGTCCAGTGCCCAGACATAC 60.108 60.000 0.00 0.00 31.99 2.39
4163 4936 0.546507 TGGTCCAGTGCCCAGACATA 60.547 55.000 0.00 0.00 31.99 2.29
4164 4937 1.426251 TTGGTCCAGTGCCCAGACAT 61.426 55.000 0.00 0.00 31.99 3.06
4165 4938 1.640593 TTTGGTCCAGTGCCCAGACA 61.641 55.000 0.00 0.00 31.99 3.41
4166 4939 0.251341 ATTTGGTCCAGTGCCCAGAC 60.251 55.000 0.00 0.00 31.04 3.51
4167 4940 0.482446 AATTTGGTCCAGTGCCCAGA 59.518 50.000 0.00 0.00 31.04 3.86
4168 4941 0.890683 GAATTTGGTCCAGTGCCCAG 59.109 55.000 0.00 0.00 31.04 4.45
4169 4942 0.187117 TGAATTTGGTCCAGTGCCCA 59.813 50.000 0.00 0.00 0.00 5.36
4170 4943 1.560505 ATGAATTTGGTCCAGTGCCC 58.439 50.000 0.00 0.00 0.00 5.36
4171 4944 3.328505 CAAATGAATTTGGTCCAGTGCC 58.671 45.455 7.72 0.00 42.51 5.01
4172 4945 4.379652 AACAAATGAATTTGGTCCAGTGC 58.620 39.130 17.61 0.00 43.77 4.40
4173 4946 8.606040 ATTTAACAAATGAATTTGGTCCAGTG 57.394 30.769 17.61 0.00 43.77 3.66
4174 4947 7.598493 CGATTTAACAAATGAATTTGGTCCAGT 59.402 33.333 17.61 1.88 43.77 4.00
4175 4948 7.598493 ACGATTTAACAAATGAATTTGGTCCAG 59.402 33.333 17.61 6.84 43.77 3.86
4178 4951 7.148656 CCCACGATTTAACAAATGAATTTGGTC 60.149 37.037 17.61 8.23 43.77 4.02
4183 4956 5.247337 ACCCCCACGATTTAACAAATGAATT 59.753 36.000 0.00 0.00 0.00 2.17
4185 4958 4.153411 ACCCCCACGATTTAACAAATGAA 58.847 39.130 0.00 0.00 0.00 2.57
4186 4959 3.768878 ACCCCCACGATTTAACAAATGA 58.231 40.909 0.00 0.00 0.00 2.57
4187 4960 5.126384 ACATACCCCCACGATTTAACAAATG 59.874 40.000 0.00 0.00 0.00 2.32
4188 4961 5.265989 ACATACCCCCACGATTTAACAAAT 58.734 37.500 0.00 0.00 0.00 2.32
4190 4963 4.304048 ACATACCCCCACGATTTAACAA 57.696 40.909 0.00 0.00 0.00 2.83
4192 4965 4.768583 TGTACATACCCCCACGATTTAAC 58.231 43.478 0.00 0.00 0.00 2.01
4193 4966 5.633655 ATGTACATACCCCCACGATTTAA 57.366 39.130 6.56 0.00 0.00 1.52
4194 4967 5.633655 AATGTACATACCCCCACGATTTA 57.366 39.130 9.21 0.00 0.00 1.40
4198 5139 4.032310 ACTAAATGTACATACCCCCACGA 58.968 43.478 9.21 0.00 0.00 4.35
4200 5141 5.106876 ACACTAAATGTACATACCCCCAC 57.893 43.478 9.21 0.00 40.88 4.61
4228 5288 7.012704 GCTTAGAGAGTATGATGCCAAAAATGA 59.987 37.037 0.00 0.00 0.00 2.57
4423 5602 5.239525 GGGAGCATATTATCAAAGGTGACAC 59.760 44.000 0.00 0.00 36.31 3.67
4426 5605 5.912149 AGGGAGCATATTATCAAAGGTGA 57.088 39.130 0.00 0.00 38.41 4.02
4486 5668 5.359576 GCATGGTATTTCCCAGTTAATGACA 59.640 40.000 0.00 0.00 38.07 3.58
4527 5709 9.177304 GCACACCTAGTAATAACAAAAGAAAAC 57.823 33.333 0.00 0.00 0.00 2.43
4542 5724 1.974957 TGAAGGCAAGCACACCTAGTA 59.025 47.619 0.00 0.00 34.31 1.82
4543 5725 0.764890 TGAAGGCAAGCACACCTAGT 59.235 50.000 0.00 0.00 34.31 2.57
4604 5786 3.479489 TGAATACATGGATGCAGCGAAT 58.521 40.909 0.00 0.00 0.00 3.34
4739 5921 9.273016 CAAAAGTACTCCTGTCTGATTCTTTTA 57.727 33.333 0.00 0.00 33.38 1.52
4740 5922 7.993183 TCAAAAGTACTCCTGTCTGATTCTTTT 59.007 33.333 0.00 0.00 34.43 2.27
4741 5923 7.509546 TCAAAAGTACTCCTGTCTGATTCTTT 58.490 34.615 0.00 0.00 0.00 2.52
4743 5925 6.672266 TCAAAAGTACTCCTGTCTGATTCT 57.328 37.500 0.00 0.00 0.00 2.40
4744 5926 7.569591 CGTTTCAAAAGTACTCCTGTCTGATTC 60.570 40.741 0.00 0.00 0.00 2.52
4745 5927 6.202954 CGTTTCAAAAGTACTCCTGTCTGATT 59.797 38.462 0.00 0.00 0.00 2.57
4747 5929 5.047847 CGTTTCAAAAGTACTCCTGTCTGA 58.952 41.667 0.00 0.00 0.00 3.27
4750 5932 7.417496 AATACGTTTCAAAAGTACTCCTGTC 57.583 36.000 0.00 0.00 0.00 3.51
4751 5933 7.927629 TGTAATACGTTTCAAAAGTACTCCTGT 59.072 33.333 0.00 0.00 0.00 4.00
4752 5934 8.301730 TGTAATACGTTTCAAAAGTACTCCTG 57.698 34.615 0.00 0.00 0.00 3.86
4753 5935 7.117379 GCTGTAATACGTTTCAAAAGTACTCCT 59.883 37.037 0.00 0.00 0.00 3.69
4754 5936 7.232300 GCTGTAATACGTTTCAAAAGTACTCC 58.768 38.462 0.00 0.00 0.00 3.85
4755 5937 6.946584 CGCTGTAATACGTTTCAAAAGTACTC 59.053 38.462 0.00 0.00 0.00 2.59
4757 5939 6.011277 CCGCTGTAATACGTTTCAAAAGTAC 58.989 40.000 0.00 0.00 0.00 2.73
4829 6015 1.068954 GCAACAAGGCTTGCTAGACAC 60.069 52.381 26.45 6.23 42.84 3.67
4855 6041 6.542370 TCTGAAACCTAAGAAAAGTCCAACAG 59.458 38.462 0.00 0.00 0.00 3.16
4960 6156 5.355630 CGAGGATGACTAGAAACTCTTCTCA 59.644 44.000 0.00 0.00 41.19 3.27
5003 6227 3.432186 GGATGTATCTGCAGGTACAAGCA 60.432 47.826 36.51 18.73 39.17 3.91
5010 6234 0.753262 GGACGGATGTATCTGCAGGT 59.247 55.000 15.13 9.93 36.64 4.00
5021 6245 3.684788 AGAACTCGAAATTTGGACGGATG 59.315 43.478 0.00 0.00 0.00 3.51
5068 6292 1.779569 GTCATCGTCCTTGTCGTTGT 58.220 50.000 0.00 0.00 32.27 3.32
5327 6554 2.557056 TGTCTCTTCAACCTACGGTGAG 59.443 50.000 0.00 0.00 35.34 3.51
5349 6579 1.617322 AGTTGTACACTCGGCTCAGA 58.383 50.000 0.00 0.00 0.00 3.27
5359 6589 1.065418 AGGCATGCCCTAGTTGTACAC 60.065 52.381 33.14 3.18 44.08 2.90
5373 6608 3.748048 CCCGTATCAGTTTGATAGGCATG 59.252 47.826 11.38 0.00 41.40 4.06
5377 6612 3.555168 GCTCCCCGTATCAGTTTGATAGG 60.555 52.174 10.34 10.34 39.76 2.57
5380 6615 2.119495 AGCTCCCCGTATCAGTTTGAT 58.881 47.619 0.00 0.00 40.72 2.57
5413 6648 3.256558 GCCGTTTAACCCTACTACACAG 58.743 50.000 0.00 0.00 0.00 3.66
5427 6662 1.133407 GCGAATTGAATGGGCCGTTTA 59.867 47.619 13.22 5.51 0.00 2.01
5442 6677 3.023119 TGGGCTTGAATACATTGCGAAT 58.977 40.909 0.00 0.00 0.00 3.34
5445 6680 2.801063 CTTGGGCTTGAATACATTGCG 58.199 47.619 0.00 0.00 0.00 4.85
5449 6684 3.434309 ACTTGCTTGGGCTTGAATACAT 58.566 40.909 0.00 0.00 39.59 2.29
5465 6700 0.470341 GGGATGGAGGGAGTACTTGC 59.530 60.000 0.00 0.00 0.00 4.01
5468 6703 4.171234 CATTATGGGATGGAGGGAGTACT 58.829 47.826 0.00 0.00 0.00 2.73
5473 6708 4.597507 GTCTTACATTATGGGATGGAGGGA 59.402 45.833 0.00 0.00 0.00 4.20
5474 6709 4.350816 TGTCTTACATTATGGGATGGAGGG 59.649 45.833 0.00 0.00 0.00 4.30
5475 6710 5.567037 TGTCTTACATTATGGGATGGAGG 57.433 43.478 0.00 0.00 0.00 4.30
5476 6711 8.378565 ACTAATGTCTTACATTATGGGATGGAG 58.621 37.037 11.72 3.41 46.11 3.86
5477 6712 8.156820 CACTAATGTCTTACATTATGGGATGGA 58.843 37.037 11.72 0.00 46.11 3.41
5478 6713 7.939039 ACACTAATGTCTTACATTATGGGATGG 59.061 37.037 11.72 3.30 46.11 3.51
5479 6714 8.908786 ACACTAATGTCTTACATTATGGGATG 57.091 34.615 11.72 8.67 46.11 3.51
5495 6730 4.365723 ACGACGTTTTCTGACACTAATGT 58.634 39.130 0.00 0.00 43.71 2.71
5496 6731 4.966850 ACGACGTTTTCTGACACTAATG 57.033 40.909 0.00 0.00 0.00 1.90
5497 6732 5.522456 TGTACGACGTTTTCTGACACTAAT 58.478 37.500 5.50 0.00 0.00 1.73
5498 6733 4.919206 TGTACGACGTTTTCTGACACTAA 58.081 39.130 5.50 0.00 0.00 2.24
5499 6734 4.550577 TGTACGACGTTTTCTGACACTA 57.449 40.909 5.50 0.00 0.00 2.74
5500 6735 3.425577 TGTACGACGTTTTCTGACACT 57.574 42.857 5.50 0.00 0.00 3.55
5501 6736 4.703899 AATGTACGACGTTTTCTGACAC 57.296 40.909 5.50 0.00 0.00 3.67
5502 6737 5.346551 CCATAATGTACGACGTTTTCTGACA 59.653 40.000 5.50 3.31 0.00 3.58
5503 6738 5.220340 CCCATAATGTACGACGTTTTCTGAC 60.220 44.000 5.50 0.00 0.00 3.51
5504 6739 4.865925 CCCATAATGTACGACGTTTTCTGA 59.134 41.667 5.50 0.00 0.00 3.27
5505 6740 4.865925 TCCCATAATGTACGACGTTTTCTG 59.134 41.667 5.50 1.64 0.00 3.02
5506 6741 4.866486 GTCCCATAATGTACGACGTTTTCT 59.134 41.667 5.50 0.00 0.00 2.52
5507 6742 4.259530 CGTCCCATAATGTACGACGTTTTC 60.260 45.833 5.50 0.00 40.96 2.29
5508 6743 3.613737 CGTCCCATAATGTACGACGTTTT 59.386 43.478 5.50 0.69 40.96 2.43
5509 6744 3.181397 CGTCCCATAATGTACGACGTTT 58.819 45.455 5.50 0.00 40.96 3.60
5510 6745 2.480073 CCGTCCCATAATGTACGACGTT 60.480 50.000 5.50 0.00 43.56 3.99
5511 6746 1.066002 CCGTCCCATAATGTACGACGT 59.934 52.381 5.52 5.52 43.56 4.34
5512 6747 1.334556 TCCGTCCCATAATGTACGACG 59.665 52.381 9.39 9.39 44.41 5.12
5513 6748 2.360165 ACTCCGTCCCATAATGTACGAC 59.640 50.000 0.00 0.00 37.53 4.34
5514 6749 2.658285 ACTCCGTCCCATAATGTACGA 58.342 47.619 0.00 0.00 37.53 3.43
5515 6750 3.567164 ACTACTCCGTCCCATAATGTACG 59.433 47.826 0.00 0.00 35.20 3.67
5516 6751 5.767168 ACTACTACTCCGTCCCATAATGTAC 59.233 44.000 0.00 0.00 0.00 2.90
5517 6752 5.945310 ACTACTACTCCGTCCCATAATGTA 58.055 41.667 0.00 0.00 0.00 2.29
5518 6753 4.801164 ACTACTACTCCGTCCCATAATGT 58.199 43.478 0.00 0.00 0.00 2.71
5519 6754 5.766670 TGTACTACTACTCCGTCCCATAATG 59.233 44.000 0.00 0.00 0.00 1.90
5520 6755 5.945310 TGTACTACTACTCCGTCCCATAAT 58.055 41.667 0.00 0.00 0.00 1.28
5521 6756 5.372343 TGTACTACTACTCCGTCCCATAA 57.628 43.478 0.00 0.00 0.00 1.90
5522 6757 5.573380 ATGTACTACTACTCCGTCCCATA 57.427 43.478 0.00 0.00 0.00 2.74
5523 6758 3.939740 TGTACTACTACTCCGTCCCAT 57.060 47.619 0.00 0.00 0.00 4.00
5524 6759 3.939740 ATGTACTACTACTCCGTCCCA 57.060 47.619 0.00 0.00 0.00 4.37
5525 6760 9.844257 AATATATATGTACTACTACTCCGTCCC 57.156 37.037 0.00 0.00 0.00 4.46
5584 6820 5.107453 CCACTCAACAACTAGCGTTTTCTAG 60.107 44.000 0.00 0.00 41.31 2.43
5595 6831 2.698274 TCTCACAGCCACTCAACAACTA 59.302 45.455 0.00 0.00 0.00 2.24
5619 6855 4.051922 GCACTGCTGTCACCAGTATATAC 58.948 47.826 4.60 4.60 41.34 1.47
5630 7095 1.546029 CCTACTACTGCACTGCTGTCA 59.454 52.381 16.05 3.90 40.85 3.58
5646 7111 3.983044 ACAGGAATCAACAGGACCTAC 57.017 47.619 0.00 0.00 0.00 3.18
5647 7112 4.081862 CGTAACAGGAATCAACAGGACCTA 60.082 45.833 0.00 0.00 0.00 3.08
5648 7113 3.306780 CGTAACAGGAATCAACAGGACCT 60.307 47.826 0.00 0.00 0.00 3.85
5649 7114 3.000727 CGTAACAGGAATCAACAGGACC 58.999 50.000 0.00 0.00 0.00 4.46
5650 7115 3.660865 ACGTAACAGGAATCAACAGGAC 58.339 45.455 0.00 0.00 0.00 3.85
5651 7116 5.421056 AGATACGTAACAGGAATCAACAGGA 59.579 40.000 0.00 0.00 0.00 3.86
5652 7117 5.661458 AGATACGTAACAGGAATCAACAGG 58.339 41.667 0.00 0.00 0.00 4.00
5653 7118 6.811665 TGAAGATACGTAACAGGAATCAACAG 59.188 38.462 0.00 0.00 0.00 3.16
5654 7119 6.693466 TGAAGATACGTAACAGGAATCAACA 58.307 36.000 0.00 0.00 0.00 3.33
5655 7120 7.707035 AGATGAAGATACGTAACAGGAATCAAC 59.293 37.037 0.00 0.00 0.00 3.18
5656 7121 7.782049 AGATGAAGATACGTAACAGGAATCAA 58.218 34.615 0.00 0.00 0.00 2.57
5657 7122 7.348080 AGATGAAGATACGTAACAGGAATCA 57.652 36.000 0.00 0.00 0.00 2.57
5658 7123 7.707035 ACAAGATGAAGATACGTAACAGGAATC 59.293 37.037 0.00 0.00 0.00 2.52
5659 7124 7.556844 ACAAGATGAAGATACGTAACAGGAAT 58.443 34.615 0.00 0.00 0.00 3.01
5660 7125 6.931838 ACAAGATGAAGATACGTAACAGGAA 58.068 36.000 0.00 0.00 0.00 3.36
5661 7126 6.525578 ACAAGATGAAGATACGTAACAGGA 57.474 37.500 0.00 0.00 0.00 3.86
5668 7133 8.258007 TCTTCCATTTACAAGATGAAGATACGT 58.742 33.333 0.00 0.00 0.00 3.57
5676 7141 8.154203 TGTTACACTCTTCCATTTACAAGATGA 58.846 33.333 0.00 0.00 0.00 2.92
5677 7142 8.230486 GTGTTACACTCTTCCATTTACAAGATG 58.770 37.037 8.41 0.00 0.00 2.90
5682 7150 5.603596 ACGTGTTACACTCTTCCATTTACA 58.396 37.500 13.86 0.00 31.34 2.41
5683 7151 5.119743 GGACGTGTTACACTCTTCCATTTAC 59.880 44.000 13.86 0.00 30.72 2.01
5686 7154 3.323979 AGGACGTGTTACACTCTTCCATT 59.676 43.478 21.51 6.88 31.89 3.16
5695 7163 1.007038 TGCGGAGGACGTGTTACAC 60.007 57.895 5.27 5.27 46.52 2.90
5719 7187 0.392193 CCACCTACAGCTTGCAGGAG 60.392 60.000 11.17 4.25 34.48 3.69
5735 7203 0.036306 TTTCGGGGCTTCTCTTCCAC 59.964 55.000 0.00 0.00 0.00 4.02
5736 7204 0.991920 ATTTCGGGGCTTCTCTTCCA 59.008 50.000 0.00 0.00 0.00 3.53
5836 7304 2.047274 GCAGTGGCGCTAACCAGA 60.047 61.111 7.64 0.00 41.46 3.86
5885 7367 4.523083 TCCAAGGAAAAAGATACGGATGG 58.477 43.478 0.00 0.00 0.00 3.51
5895 7378 1.615392 CCACTGGCTCCAAGGAAAAAG 59.385 52.381 1.92 0.00 0.00 2.27
5905 7388 2.032681 GTGTCCACCACTGGCTCC 59.967 66.667 0.00 0.00 41.11 4.70
5975 7462 1.063649 GTACGCTTCGCATCGGAGA 59.936 57.895 0.00 0.00 45.75 3.71
5977 7464 2.277692 CGTACGCTTCGCATCGGA 60.278 61.111 0.52 0.00 0.00 4.55
6012 7500 3.805207 AGGTGGTGTTCTTGTTAGACAC 58.195 45.455 0.00 0.00 34.48 3.67
6019 7507 1.450211 CGGGAGGTGGTGTTCTTGT 59.550 57.895 0.00 0.00 0.00 3.16
6059 7977 0.403655 TACATGGCAGGCAAACCTCA 59.596 50.000 0.00 0.00 46.34 3.86
6111 8029 8.770828 GTGCCTTATTATTATTAGCTTCGACAA 58.229 33.333 0.00 0.00 0.00 3.18
6112 8030 7.929245 TGTGCCTTATTATTATTAGCTTCGACA 59.071 33.333 0.00 0.00 0.00 4.35
6113 8031 8.306680 TGTGCCTTATTATTATTAGCTTCGAC 57.693 34.615 0.00 0.00 0.00 4.20
6114 8032 8.896320 TTGTGCCTTATTATTATTAGCTTCGA 57.104 30.769 0.00 0.00 0.00 3.71
6115 8033 8.774586 ACTTGTGCCTTATTATTATTAGCTTCG 58.225 33.333 0.00 0.00 0.00 3.79
6116 8034 9.884465 CACTTGTGCCTTATTATTATTAGCTTC 57.116 33.333 0.00 0.00 0.00 3.86
6117 8035 8.352942 GCACTTGTGCCTTATTATTATTAGCTT 58.647 33.333 14.17 0.00 0.00 3.74
6118 8036 7.721399 AGCACTTGTGCCTTATTATTATTAGCT 59.279 33.333 20.39 0.00 34.90 3.32
6119 8037 7.875971 AGCACTTGTGCCTTATTATTATTAGC 58.124 34.615 20.39 0.00 34.90 3.09
6120 8038 9.277783 AGAGCACTTGTGCCTTATTATTATTAG 57.722 33.333 20.39 0.00 34.90 1.73
6121 8039 9.056005 CAGAGCACTTGTGCCTTATTATTATTA 57.944 33.333 20.39 0.00 34.90 0.98
6122 8040 7.013655 CCAGAGCACTTGTGCCTTATTATTATT 59.986 37.037 20.39 0.00 34.90 1.40
6123 8041 6.488006 CCAGAGCACTTGTGCCTTATTATTAT 59.512 38.462 20.39 0.00 34.90 1.28
6124 8042 5.822519 CCAGAGCACTTGTGCCTTATTATTA 59.177 40.000 20.39 0.00 34.90 0.98
6125 8043 4.641989 CCAGAGCACTTGTGCCTTATTATT 59.358 41.667 20.39 1.16 34.90 1.40
6126 8044 4.080356 TCCAGAGCACTTGTGCCTTATTAT 60.080 41.667 20.39 1.87 34.90 1.28
6127 8045 3.263170 TCCAGAGCACTTGTGCCTTATTA 59.737 43.478 20.39 1.87 34.90 0.98
6128 8046 2.040278 TCCAGAGCACTTGTGCCTTATT 59.960 45.455 20.39 3.29 34.90 1.40
6129 8047 1.630369 TCCAGAGCACTTGTGCCTTAT 59.370 47.619 20.39 3.66 34.90 1.73
6130 8048 1.002430 CTCCAGAGCACTTGTGCCTTA 59.998 52.381 20.39 8.32 34.90 2.69
6131 8049 0.250640 CTCCAGAGCACTTGTGCCTT 60.251 55.000 20.39 7.79 34.90 4.35
6132 8050 1.374190 CTCCAGAGCACTTGTGCCT 59.626 57.895 20.39 14.50 34.90 4.75
6133 8051 1.072159 ACTCCAGAGCACTTGTGCC 59.928 57.895 20.39 12.68 34.90 5.01
6134 8052 1.233285 CCACTCCAGAGCACTTGTGC 61.233 60.000 16.98 16.98 0.00 4.57
6135 8053 0.394192 TCCACTCCAGAGCACTTGTG 59.606 55.000 0.00 0.00 0.00 3.33
6136 8054 1.131638 TTCCACTCCAGAGCACTTGT 58.868 50.000 0.00 0.00 0.00 3.16
6137 8055 2.260844 TTTCCACTCCAGAGCACTTG 57.739 50.000 0.00 0.00 0.00 3.16
6138 8056 3.515602 AATTTCCACTCCAGAGCACTT 57.484 42.857 0.00 0.00 0.00 3.16
6139 8057 3.620966 GCTAATTTCCACTCCAGAGCACT 60.621 47.826 0.00 0.00 0.00 4.40
6140 8058 2.680339 GCTAATTTCCACTCCAGAGCAC 59.320 50.000 0.00 0.00 0.00 4.40
6141 8059 2.573462 AGCTAATTTCCACTCCAGAGCA 59.427 45.455 0.00 0.00 0.00 4.26
6142 8060 3.274095 AGCTAATTTCCACTCCAGAGC 57.726 47.619 0.00 0.00 0.00 4.09
6143 8061 5.127845 TGTCTAGCTAATTTCCACTCCAGAG 59.872 44.000 0.00 0.00 0.00 3.35
6144 8062 5.023452 TGTCTAGCTAATTTCCACTCCAGA 58.977 41.667 0.00 0.00 0.00 3.86
6145 8063 5.344743 TGTCTAGCTAATTTCCACTCCAG 57.655 43.478 0.00 0.00 0.00 3.86
6146 8064 5.755409 TTGTCTAGCTAATTTCCACTCCA 57.245 39.130 0.00 0.00 0.00 3.86
6147 8065 6.425417 GCTATTGTCTAGCTAATTTCCACTCC 59.575 42.308 0.00 0.00 37.56 3.85
6148 8066 6.425417 GGCTATTGTCTAGCTAATTTCCACTC 59.575 42.308 0.00 0.00 40.25 3.51
6149 8067 6.126768 TGGCTATTGTCTAGCTAATTTCCACT 60.127 38.462 0.00 0.00 40.25 4.00
6150 8068 6.017852 GTGGCTATTGTCTAGCTAATTTCCAC 60.018 42.308 16.52 16.52 40.25 4.02
6151 8069 6.055588 GTGGCTATTGTCTAGCTAATTTCCA 58.944 40.000 0.00 0.00 40.25 3.53
6152 8070 5.177696 CGTGGCTATTGTCTAGCTAATTTCC 59.822 44.000 0.00 0.00 40.25 3.13
6153 8071 5.753921 ACGTGGCTATTGTCTAGCTAATTTC 59.246 40.000 0.00 0.00 40.25 2.17
6154 8072 5.523916 CACGTGGCTATTGTCTAGCTAATTT 59.476 40.000 7.95 0.00 40.25 1.82
6155 8073 5.050490 CACGTGGCTATTGTCTAGCTAATT 58.950 41.667 7.95 0.00 40.25 1.40
6156 8074 4.501571 CCACGTGGCTATTGTCTAGCTAAT 60.502 45.833 24.02 0.00 40.25 1.73
6157 8075 3.181479 CCACGTGGCTATTGTCTAGCTAA 60.181 47.826 24.02 0.00 40.25 3.09
6158 8076 2.361119 CCACGTGGCTATTGTCTAGCTA 59.639 50.000 24.02 0.00 40.25 3.32
6159 8077 1.137086 CCACGTGGCTATTGTCTAGCT 59.863 52.381 24.02 0.00 40.25 3.32
6160 8078 1.134788 ACCACGTGGCTATTGTCTAGC 60.135 52.381 34.26 0.00 39.32 3.42
6161 8079 2.540515 CACCACGTGGCTATTGTCTAG 58.459 52.381 34.26 6.49 39.32 2.43
6162 8080 2.665649 CACCACGTGGCTATTGTCTA 57.334 50.000 34.26 0.00 39.32 2.59
6163 8081 3.532896 CACCACGTGGCTATTGTCT 57.467 52.632 34.26 9.57 39.32 3.41
6173 8091 2.035449 TGTCTCTTTAGTCCACCACGTG 59.965 50.000 9.08 9.08 0.00 4.49
6174 8092 2.313317 TGTCTCTTTAGTCCACCACGT 58.687 47.619 0.00 0.00 0.00 4.49
6175 8093 3.380479 TTGTCTCTTTAGTCCACCACG 57.620 47.619 0.00 0.00 0.00 4.94
6176 8094 6.038997 AGTATTGTCTCTTTAGTCCACCAC 57.961 41.667 0.00 0.00 0.00 4.16
6177 8095 7.399191 ACATAGTATTGTCTCTTTAGTCCACCA 59.601 37.037 0.00 0.00 0.00 4.17
6178 8096 7.783042 ACATAGTATTGTCTCTTTAGTCCACC 58.217 38.462 0.00 0.00 0.00 4.61
6186 8104 9.372369 GTTGCTCTAACATAGTATTGTCTCTTT 57.628 33.333 0.00 0.00 39.16 2.52
6187 8105 8.754080 AGTTGCTCTAACATAGTATTGTCTCTT 58.246 33.333 0.00 0.00 41.88 2.85
6188 8106 8.299990 AGTTGCTCTAACATAGTATTGTCTCT 57.700 34.615 0.00 0.00 41.88 3.10
6189 8107 8.934507 AAGTTGCTCTAACATAGTATTGTCTC 57.065 34.615 0.00 0.00 41.88 3.36
6192 8110 9.099454 GCTAAAGTTGCTCTAACATAGTATTGT 57.901 33.333 0.00 0.00 41.88 2.71
6193 8111 9.098355 TGCTAAAGTTGCTCTAACATAGTATTG 57.902 33.333 0.00 0.00 41.88 1.90
6194 8112 9.319143 CTGCTAAAGTTGCTCTAACATAGTATT 57.681 33.333 0.00 0.00 41.88 1.89
6195 8113 8.696374 TCTGCTAAAGTTGCTCTAACATAGTAT 58.304 33.333 0.00 0.00 41.88 2.12
6196 8114 8.063200 TCTGCTAAAGTTGCTCTAACATAGTA 57.937 34.615 0.00 0.00 41.88 1.82
6197 8115 6.936279 TCTGCTAAAGTTGCTCTAACATAGT 58.064 36.000 0.00 0.00 41.88 2.12
6198 8116 7.170658 GGATCTGCTAAAGTTGCTCTAACATAG 59.829 40.741 0.00 0.00 41.88 2.23
6199 8117 6.986817 GGATCTGCTAAAGTTGCTCTAACATA 59.013 38.462 0.00 0.00 41.88 2.29
6200 8118 5.819901 GGATCTGCTAAAGTTGCTCTAACAT 59.180 40.000 0.00 0.00 41.88 2.71
6201 8119 5.178797 GGATCTGCTAAAGTTGCTCTAACA 58.821 41.667 0.00 0.00 41.88 2.41
6202 8120 4.572795 GGGATCTGCTAAAGTTGCTCTAAC 59.427 45.833 0.00 0.00 39.65 2.34
6203 8121 4.471386 AGGGATCTGCTAAAGTTGCTCTAA 59.529 41.667 0.00 0.00 0.00 2.10
6204 8122 4.033709 AGGGATCTGCTAAAGTTGCTCTA 58.966 43.478 0.00 0.00 0.00 2.43
6205 8123 2.843113 AGGGATCTGCTAAAGTTGCTCT 59.157 45.455 0.00 0.00 0.00 4.09
6206 8124 3.274095 AGGGATCTGCTAAAGTTGCTC 57.726 47.619 0.00 0.00 0.00 4.26
6207 8125 3.728385 AAGGGATCTGCTAAAGTTGCT 57.272 42.857 0.00 0.00 0.00 3.91
6208 8126 7.663493 AGATTATAAGGGATCTGCTAAAGTTGC 59.337 37.037 0.00 0.00 31.65 4.17
6209 8127 9.566432 AAGATTATAAGGGATCTGCTAAAGTTG 57.434 33.333 0.00 0.00 33.12 3.16
6210 8128 9.566432 CAAGATTATAAGGGATCTGCTAAAGTT 57.434 33.333 0.00 0.00 33.12 2.66
6211 8129 8.718656 ACAAGATTATAAGGGATCTGCTAAAGT 58.281 33.333 0.00 0.00 33.12 2.66
6213 8131 9.998106 GTACAAGATTATAAGGGATCTGCTAAA 57.002 33.333 0.00 0.00 33.12 1.85
6214 8132 8.594550 GGTACAAGATTATAAGGGATCTGCTAA 58.405 37.037 0.00 0.00 33.12 3.09
6215 8133 7.093902 CGGTACAAGATTATAAGGGATCTGCTA 60.094 40.741 0.00 0.00 33.12 3.49
6216 8134 6.295349 CGGTACAAGATTATAAGGGATCTGCT 60.295 42.308 0.00 0.00 33.12 4.24
6217 8135 5.869888 CGGTACAAGATTATAAGGGATCTGC 59.130 44.000 0.00 0.00 33.12 4.26
6218 8136 6.868864 CACGGTACAAGATTATAAGGGATCTG 59.131 42.308 0.00 0.00 33.12 2.90
6219 8137 6.781014 TCACGGTACAAGATTATAAGGGATCT 59.219 38.462 0.00 0.00 34.19 2.75
6220 8138 6.989659 TCACGGTACAAGATTATAAGGGATC 58.010 40.000 0.00 0.00 0.00 3.36
6221 8139 6.989155 TCACGGTACAAGATTATAAGGGAT 57.011 37.500 0.00 0.00 0.00 3.85
6222 8140 6.795144 TTCACGGTACAAGATTATAAGGGA 57.205 37.500 0.00 0.00 0.00 4.20
6223 8141 8.342634 CAATTTCACGGTACAAGATTATAAGGG 58.657 37.037 0.00 0.00 0.00 3.95
6224 8142 9.104965 TCAATTTCACGGTACAAGATTATAAGG 57.895 33.333 0.00 0.00 0.00 2.69
6230 8148 8.788806 TGTAAATCAATTTCACGGTACAAGATT 58.211 29.630 0.00 0.00 0.00 2.40
6231 8149 8.330466 TGTAAATCAATTTCACGGTACAAGAT 57.670 30.769 0.00 0.00 0.00 2.40
6232 8150 7.094975 CCTGTAAATCAATTTCACGGTACAAGA 60.095 37.037 0.00 0.00 0.00 3.02
6233 8151 7.021196 CCTGTAAATCAATTTCACGGTACAAG 58.979 38.462 0.00 0.00 0.00 3.16
6234 8152 6.072397 CCCTGTAAATCAATTTCACGGTACAA 60.072 38.462 0.00 0.00 0.00 2.41
6235 8153 5.413213 CCCTGTAAATCAATTTCACGGTACA 59.587 40.000 0.00 0.00 0.00 2.90
6236 8154 5.413523 ACCCTGTAAATCAATTTCACGGTAC 59.586 40.000 0.00 0.00 0.00 3.34
6237 8155 5.413213 CACCCTGTAAATCAATTTCACGGTA 59.587 40.000 0.00 0.00 0.00 4.02
6238 8156 4.217550 CACCCTGTAAATCAATTTCACGGT 59.782 41.667 0.00 0.00 0.00 4.83
6239 8157 4.380444 CCACCCTGTAAATCAATTTCACGG 60.380 45.833 0.00 0.00 0.00 4.94
6240 8158 4.457603 TCCACCCTGTAAATCAATTTCACG 59.542 41.667 0.00 0.00 0.00 4.35
6241 8159 5.476945 ACTCCACCCTGTAAATCAATTTCAC 59.523 40.000 0.00 0.00 0.00 3.18
6242 8160 5.640147 ACTCCACCCTGTAAATCAATTTCA 58.360 37.500 0.00 0.00 0.00 2.69
6243 8161 6.318900 CCTACTCCACCCTGTAAATCAATTTC 59.681 42.308 0.00 0.00 0.00 2.17
6244 8162 6.011981 TCCTACTCCACCCTGTAAATCAATTT 60.012 38.462 0.00 0.00 0.00 1.82
6245 8163 5.491078 TCCTACTCCACCCTGTAAATCAATT 59.509 40.000 0.00 0.00 0.00 2.32
6246 8164 5.036916 TCCTACTCCACCCTGTAAATCAAT 58.963 41.667 0.00 0.00 0.00 2.57
6247 8165 4.224370 GTCCTACTCCACCCTGTAAATCAA 59.776 45.833 0.00 0.00 0.00 2.57
6248 8166 3.773119 GTCCTACTCCACCCTGTAAATCA 59.227 47.826 0.00 0.00 0.00 2.57
6249 8167 3.773119 TGTCCTACTCCACCCTGTAAATC 59.227 47.826 0.00 0.00 0.00 2.17
6250 8168 3.798515 TGTCCTACTCCACCCTGTAAAT 58.201 45.455 0.00 0.00 0.00 1.40
6251 8169 3.263369 TGTCCTACTCCACCCTGTAAA 57.737 47.619 0.00 0.00 0.00 2.01
6252 8170 3.104512 CATGTCCTACTCCACCCTGTAA 58.895 50.000 0.00 0.00 0.00 2.41
6253 8171 2.625883 CCATGTCCTACTCCACCCTGTA 60.626 54.545 0.00 0.00 0.00 2.74
6254 8172 1.573108 CATGTCCTACTCCACCCTGT 58.427 55.000 0.00 0.00 0.00 4.00
6255 8173 0.833287 CCATGTCCTACTCCACCCTG 59.167 60.000 0.00 0.00 0.00 4.45
6256 8174 0.326618 CCCATGTCCTACTCCACCCT 60.327 60.000 0.00 0.00 0.00 4.34
6257 8175 0.326238 TCCCATGTCCTACTCCACCC 60.326 60.000 0.00 0.00 0.00 4.61
6258 8176 0.831307 GTCCCATGTCCTACTCCACC 59.169 60.000 0.00 0.00 0.00 4.61
6259 8177 1.207329 GTGTCCCATGTCCTACTCCAC 59.793 57.143 0.00 0.00 0.00 4.02
6260 8178 1.568504 GTGTCCCATGTCCTACTCCA 58.431 55.000 0.00 0.00 0.00 3.86
6261 8179 0.460311 CGTGTCCCATGTCCTACTCC 59.540 60.000 0.00 0.00 0.00 3.85
6262 8180 1.405821 CTCGTGTCCCATGTCCTACTC 59.594 57.143 0.00 0.00 0.00 2.59
6263 8181 1.475403 CTCGTGTCCCATGTCCTACT 58.525 55.000 0.00 0.00 0.00 2.57
6264 8182 0.460311 CCTCGTGTCCCATGTCCTAC 59.540 60.000 0.00 0.00 0.00 3.18
6265 8183 1.327690 GCCTCGTGTCCCATGTCCTA 61.328 60.000 0.00 0.00 0.00 2.94
6266 8184 2.660064 GCCTCGTGTCCCATGTCCT 61.660 63.158 0.00 0.00 0.00 3.85
6267 8185 2.125106 GCCTCGTGTCCCATGTCC 60.125 66.667 0.00 0.00 0.00 4.02
6268 8186 2.509336 CGCCTCGTGTCCCATGTC 60.509 66.667 0.00 0.00 0.00 3.06
6269 8187 4.760047 GCGCCTCGTGTCCCATGT 62.760 66.667 0.00 0.00 0.00 3.21
6275 8193 4.760047 ATGGTGGCGCCTCGTGTC 62.760 66.667 29.70 11.69 38.35 3.67
6276 8194 4.760047 GATGGTGGCGCCTCGTGT 62.760 66.667 29.70 13.12 38.35 4.49
6277 8195 4.457496 AGATGGTGGCGCCTCGTG 62.457 66.667 29.70 0.00 38.35 4.35
6278 8196 4.148825 GAGATGGTGGCGCCTCGT 62.149 66.667 29.70 20.57 38.35 4.18
6279 8197 4.899239 GGAGATGGTGGCGCCTCG 62.899 72.222 29.70 0.00 38.35 4.63
6280 8198 4.554036 GGGAGATGGTGGCGCCTC 62.554 72.222 29.70 24.78 38.35 4.70
6286 8204 1.622607 TAAGGCACGGGAGATGGTGG 61.623 60.000 0.00 0.00 34.76 4.61
6287 8205 0.462047 GTAAGGCACGGGAGATGGTG 60.462 60.000 0.00 0.00 37.22 4.17
6288 8206 0.617820 AGTAAGGCACGGGAGATGGT 60.618 55.000 0.00 0.00 0.00 3.55
6289 8207 0.105039 GAGTAAGGCACGGGAGATGG 59.895 60.000 0.00 0.00 0.00 3.51
6290 8208 1.115467 AGAGTAAGGCACGGGAGATG 58.885 55.000 0.00 0.00 0.00 2.90
6291 8209 1.867363 AAGAGTAAGGCACGGGAGAT 58.133 50.000 0.00 0.00 0.00 2.75
6292 8210 1.549170 GAAAGAGTAAGGCACGGGAGA 59.451 52.381 0.00 0.00 0.00 3.71
6293 8211 1.550976 AGAAAGAGTAAGGCACGGGAG 59.449 52.381 0.00 0.00 0.00 4.30
6294 8212 1.549170 GAGAAAGAGTAAGGCACGGGA 59.451 52.381 0.00 0.00 0.00 5.14
6295 8213 1.736032 CGAGAAAGAGTAAGGCACGGG 60.736 57.143 0.00 0.00 0.00 5.28
6296 8214 1.067776 ACGAGAAAGAGTAAGGCACGG 60.068 52.381 0.00 0.00 0.00 4.94
6297 8215 2.251893 GACGAGAAAGAGTAAGGCACG 58.748 52.381 0.00 0.00 0.00 5.34
6298 8216 2.095364 TCGACGAGAAAGAGTAAGGCAC 60.095 50.000 0.00 0.00 0.00 5.01
6299 8217 2.156917 TCGACGAGAAAGAGTAAGGCA 58.843 47.619 0.00 0.00 0.00 4.75
6300 8218 2.915738 TCGACGAGAAAGAGTAAGGC 57.084 50.000 0.00 0.00 0.00 4.35
6309 8227 3.972403 TGTCATGAGTTTCGACGAGAAA 58.028 40.909 0.00 6.71 45.76 2.52
6310 8228 3.636282 TGTCATGAGTTTCGACGAGAA 57.364 42.857 0.00 0.00 37.01 2.87
6311 8229 3.727970 CGATGTCATGAGTTTCGACGAGA 60.728 47.826 13.76 0.00 32.17 4.04
6312 8230 2.527887 CGATGTCATGAGTTTCGACGAG 59.472 50.000 13.76 0.00 32.17 4.18
6319 8237 2.251040 CGACGTCGATGTCATGAGTTT 58.749 47.619 33.35 0.00 43.02 2.66
6321 8239 0.523546 GCGACGTCGATGTCATGAGT 60.524 55.000 39.74 0.00 43.02 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.