Multiple sequence alignment - TraesCS6A01G169900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G169900 chr6A 100.000 5464 0 0 1 5464 180304292 180309755 0.000000e+00 10091
1 TraesCS6A01G169900 chr6D 95.350 1957 58 10 593 2527 137492064 137494009 0.000000e+00 3079
2 TraesCS6A01G169900 chr6D 97.366 1367 21 4 3512 4866 137495139 137496502 0.000000e+00 2311
3 TraesCS6A01G169900 chr6D 95.477 619 21 5 2898 3514 137494494 137495107 0.000000e+00 981
4 TraesCS6A01G169900 chr6D 95.429 175 8 0 2629 2803 137494257 137494431 4.170000e-71 279
5 TraesCS6A01G169900 chr6D 96.739 92 3 0 5047 5138 137496491 137496582 2.640000e-33 154
6 TraesCS6A01G169900 chr6B 93.783 1914 83 12 596 2501 237099904 237101789 0.000000e+00 2843
7 TraesCS6A01G169900 chr6B 94.923 1103 34 7 3785 4866 237103263 237104364 0.000000e+00 1707
8 TraesCS6A01G169900 chr6B 92.257 452 28 4 2899 3349 237102283 237102728 7.720000e-178 634
9 TraesCS6A01G169900 chr6B 90.461 304 27 1 2552 2853 237101798 237102101 3.070000e-107 399
10 TraesCS6A01G169900 chr6B 82.791 430 37 19 3346 3740 237102836 237103263 3.130000e-92 350
11 TraesCS6A01G169900 chr3A 88.777 597 65 2 1 596 543172870 543172275 0.000000e+00 730
12 TraesCS6A01G169900 chr7A 87.416 596 74 1 1 596 427283434 427284028 0.000000e+00 684
13 TraesCS6A01G169900 chr1D 86.050 595 83 0 2 596 70609001 70608407 1.660000e-179 640
14 TraesCS6A01G169900 chr2D 85.067 596 89 0 1 596 544325046 544325641 4.680000e-170 608
15 TraesCS6A01G169900 chr4D 83.725 596 97 0 1 596 174158447 174157852 1.030000e-156 564
16 TraesCS6A01G169900 chr2B 83.389 596 97 2 2 596 572065419 572064825 8.000000e-153 551
17 TraesCS6A01G169900 chr5A 94.624 279 13 2 5133 5411 510561356 510561080 1.090000e-116 431
18 TraesCS6A01G169900 chr5A 97.872 188 3 1 4866 5052 570366920 570367107 1.900000e-84 324
19 TraesCS6A01G169900 chr7D 95.185 270 11 2 5139 5408 152311993 152312260 5.060000e-115 425
20 TraesCS6A01G169900 chr7B 93.548 279 17 1 5129 5407 605054459 605054736 1.100000e-111 414
21 TraesCS6A01G169900 chr7B 93.190 279 17 2 5129 5407 534146743 534147019 5.090000e-110 409
22 TraesCS6A01G169900 chr7B 92.832 279 17 2 5129 5407 41994078 41994353 8.530000e-108 401
23 TraesCS6A01G169900 chr3B 94.424 269 13 2 5139 5407 684570430 684570696 3.940000e-111 412
24 TraesCS6A01G169900 chr3B 93.214 280 15 4 5129 5407 492513362 492513638 5.090000e-110 409
25 TraesCS6A01G169900 chr1B 94.424 269 11 2 5139 5407 167256256 167255992 1.420000e-110 411
26 TraesCS6A01G169900 chr1B 90.683 161 12 3 5121 5279 77158742 77158901 1.540000e-50 211
27 TraesCS6A01G169900 chr4B 92.832 279 17 3 5129 5407 89858189 89858464 8.530000e-108 401
28 TraesCS6A01G169900 chr4A 100.000 183 0 0 4866 5048 11366022 11366204 6.780000e-89 339
29 TraesCS6A01G169900 chr4A 97.895 190 2 2 4864 5051 47138081 47137892 1.470000e-85 327
30 TraesCS6A01G169900 chr1A 97.959 196 3 1 4864 5059 398058484 398058678 6.780000e-89 339
31 TraesCS6A01G169900 chr1A 98.396 187 2 1 4861 5046 330765862 330766048 1.470000e-85 327
32 TraesCS6A01G169900 chr2A 99.451 182 0 1 4867 5048 88796038 88796218 4.080000e-86 329
33 TraesCS6A01G169900 chr2A 96.465 198 5 2 4863 5058 63805897 63805700 5.280000e-85 326
34 TraesCS6A01G169900 chr2A 96.020 201 5 3 4860 5058 38649959 38649760 1.900000e-84 324
35 TraesCS6A01G169900 chr2A 95.833 192 5 3 4865 5055 756213858 756213669 1.910000e-79 307
36 TraesCS6A01G169900 chr2A 81.459 329 61 0 1 329 75348350 75348022 2.510000e-68 270
37 TraesCS6A01G169900 chr5B 87.135 171 19 3 5111 5279 106035837 106036006 2.010000e-44 191


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G169900 chr6A 180304292 180309755 5463 False 10091.0 10091 100.0000 1 5464 1 chr6A.!!$F1 5463
1 TraesCS6A01G169900 chr6D 137492064 137496582 4518 False 1360.8 3079 96.0722 593 5138 5 chr6D.!!$F1 4545
2 TraesCS6A01G169900 chr6B 237099904 237104364 4460 False 1186.6 2843 90.8430 596 4866 5 chr6B.!!$F1 4270
3 TraesCS6A01G169900 chr3A 543172275 543172870 595 True 730.0 730 88.7770 1 596 1 chr3A.!!$R1 595
4 TraesCS6A01G169900 chr7A 427283434 427284028 594 False 684.0 684 87.4160 1 596 1 chr7A.!!$F1 595
5 TraesCS6A01G169900 chr1D 70608407 70609001 594 True 640.0 640 86.0500 2 596 1 chr1D.!!$R1 594
6 TraesCS6A01G169900 chr2D 544325046 544325641 595 False 608.0 608 85.0670 1 596 1 chr2D.!!$F1 595
7 TraesCS6A01G169900 chr4D 174157852 174158447 595 True 564.0 564 83.7250 1 596 1 chr4D.!!$R1 595
8 TraesCS6A01G169900 chr2B 572064825 572065419 594 True 551.0 551 83.3890 2 596 1 chr2B.!!$R1 594

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
896 918 0.311165 CTAATCGATCCGCTCCGTGT 59.689 55.0 0.0 0.0 0.0 4.49 F
2861 3086 0.178987 TATCCTCCTCGCACCTCCTC 60.179 60.0 0.0 0.0 0.0 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2868 3093 0.326264 GCAGCAAAGGGAGAGAGGAA 59.674 55.000 0.0 0.0 0.0 3.36 R
4494 5046 1.446792 CATGTCTCTCGCGCCAACT 60.447 57.895 0.0 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 1.074951 AACCACCTTAGTGCTGGCC 59.925 57.895 0.00 0.00 43.09 5.36
211 212 6.429692 TGTTCTTCTCGCATGAATTTTCCTTA 59.570 34.615 0.00 0.00 0.00 2.69
242 243 2.614983 GCACCAAAAGGAAGTTGTCGTA 59.385 45.455 0.00 0.00 0.00 3.43
248 249 5.227908 CAAAAGGAAGTTGTCGTAGAGCTA 58.772 41.667 0.00 0.00 36.95 3.32
266 267 3.136626 AGCTATCGCCCTTTTATGAAGGT 59.863 43.478 8.40 0.00 35.65 3.50
267 268 3.498777 GCTATCGCCCTTTTATGAAGGTC 59.501 47.826 8.40 0.00 35.65 3.85
366 367 2.099756 GCTGTGAATTAGGTTGATGGGC 59.900 50.000 0.00 0.00 0.00 5.36
399 400 4.508662 CAATTTCTTCTACCTCCGCTCTT 58.491 43.478 0.00 0.00 0.00 2.85
477 478 4.142687 CCCACGAACAACTTCATCATAACC 60.143 45.833 0.00 0.00 0.00 2.85
504 505 9.224267 GCCATGACATCATACTTTATTATCTGT 57.776 33.333 0.00 0.00 34.26 3.41
523 524 7.807977 ATCTGTCAAGCTTTGTAGAAGAAAA 57.192 32.000 0.00 0.00 32.17 2.29
540 541 6.260936 AGAAGAAAACACCAATATAGCCATCG 59.739 38.462 0.00 0.00 0.00 3.84
605 606 6.127168 TGCCATACTTCCTCTTATTTCTCGAA 60.127 38.462 0.00 0.00 0.00 3.71
623 624 2.794910 CGAAACGCAGAGAGTGAGAAAA 59.205 45.455 0.00 0.00 0.00 2.29
665 666 1.135112 CGCAAAATTACCCCCTTGCTC 60.135 52.381 8.26 0.00 41.56 4.26
666 667 1.207089 GCAAAATTACCCCCTTGCTCC 59.793 52.381 3.56 0.00 40.76 4.70
667 668 2.534990 CAAAATTACCCCCTTGCTCCA 58.465 47.619 0.00 0.00 0.00 3.86
668 669 2.903135 CAAAATTACCCCCTTGCTCCAA 59.097 45.455 0.00 0.00 0.00 3.53
669 670 2.231716 AATTACCCCCTTGCTCCAAC 57.768 50.000 0.00 0.00 0.00 3.77
670 671 0.335019 ATTACCCCCTTGCTCCAACC 59.665 55.000 0.00 0.00 0.00 3.77
671 672 0.774491 TTACCCCCTTGCTCCAACCT 60.774 55.000 0.00 0.00 0.00 3.50
672 673 1.205460 TACCCCCTTGCTCCAACCTC 61.205 60.000 0.00 0.00 0.00 3.85
673 674 2.538141 CCCCCTTGCTCCAACCTCA 61.538 63.158 0.00 0.00 0.00 3.86
752 760 2.735259 TCCCTAGGAAACAAGGAGGT 57.265 50.000 11.48 0.00 34.58 3.85
759 767 2.783510 AGGAAACAAGGAGGTGAAGGAA 59.216 45.455 0.00 0.00 0.00 3.36
861 883 3.204827 CCTGCCGCCTGAATTCCG 61.205 66.667 2.27 0.00 0.00 4.30
862 884 3.880846 CTGCCGCCTGAATTCCGC 61.881 66.667 2.27 3.79 0.00 5.54
896 918 0.311165 CTAATCGATCCGCTCCGTGT 59.689 55.000 0.00 0.00 0.00 4.49
1125 1148 1.604308 CATGCACCAACAGCCAGGA 60.604 57.895 0.00 0.00 0.00 3.86
1299 1322 1.483827 CAGGAGCTGCAGAGGATACAA 59.516 52.381 20.43 0.00 41.41 2.41
1389 1412 1.066587 GGAGGCCGATCTGAAGTCG 59.933 63.158 0.00 0.00 38.75 4.18
1538 1561 0.321034 CAGCAGCTGCCAGTACTCAA 60.321 55.000 34.39 0.00 43.38 3.02
1616 1639 3.077359 GCTGTACTTGTTCTCCAGCATT 58.923 45.455 5.16 0.00 45.94 3.56
1617 1640 4.253685 GCTGTACTTGTTCTCCAGCATTA 58.746 43.478 5.16 0.00 45.94 1.90
1668 1691 9.859427 CCTCAACTTTGATCATGCTATTTAAAA 57.141 29.630 0.00 0.00 36.46 1.52
2493 2518 5.576447 AAACCTCCTTAATTATTGTGCCG 57.424 39.130 0.00 0.00 0.00 5.69
2551 2576 9.029368 CATATCTTAGAGAGAGAGAGAGAGAGA 57.971 40.741 0.00 0.00 37.93 3.10
2552 2577 6.968263 TCTTAGAGAGAGAGAGAGAGAGAG 57.032 45.833 0.00 0.00 0.00 3.20
2553 2578 6.673583 TCTTAGAGAGAGAGAGAGAGAGAGA 58.326 44.000 0.00 0.00 0.00 3.10
2554 2579 6.775142 TCTTAGAGAGAGAGAGAGAGAGAGAG 59.225 46.154 0.00 0.00 0.00 3.20
2555 2580 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
2556 2581 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2557 2582 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2558 2583 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2559 2584 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2560 2585 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2561 2586 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2562 2587 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2563 2588 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2564 2589 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2565 2590 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2566 2591 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2567 2592 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2568 2593 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2569 2594 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2601 2626 6.949578 AACACTGTTTATGTTTATGCATGC 57.050 33.333 11.82 11.82 36.93 4.06
2808 3033 6.723977 CCCATCTTCCTATTCTTCTACTAGCT 59.276 42.308 0.00 0.00 0.00 3.32
2815 3040 5.412286 CCTATTCTTCTACTAGCTCCCGTAC 59.588 48.000 0.00 0.00 0.00 3.67
2821 3046 1.064296 CTAGCTCCCGTACGTGCAG 59.936 63.158 21.12 12.48 0.00 4.41
2823 3048 1.374343 TAGCTCCCGTACGTGCAGAG 61.374 60.000 21.12 17.62 0.00 3.35
2853 3078 2.572209 AGTCTAGGTATCCTCCTCGC 57.428 55.000 0.00 0.00 38.86 5.03
2854 3079 1.775459 AGTCTAGGTATCCTCCTCGCA 59.225 52.381 0.00 0.00 38.86 5.10
2857 3082 0.851469 TAGGTATCCTCCTCGCACCT 59.149 55.000 0.00 0.00 42.25 4.00
2860 3085 0.468400 GTATCCTCCTCGCACCTCCT 60.468 60.000 0.00 0.00 0.00 3.69
2861 3086 0.178987 TATCCTCCTCGCACCTCCTC 60.179 60.000 0.00 0.00 0.00 3.71
2862 3087 1.943730 ATCCTCCTCGCACCTCCTCT 61.944 60.000 0.00 0.00 0.00 3.69
2863 3088 2.124693 CCTCCTCGCACCTCCTCTC 61.125 68.421 0.00 0.00 0.00 3.20
2864 3089 2.043852 TCCTCGCACCTCCTCTCC 60.044 66.667 0.00 0.00 0.00 3.71
2865 3090 3.151022 CCTCGCACCTCCTCTCCC 61.151 72.222 0.00 0.00 0.00 4.30
2866 3091 2.043450 CTCGCACCTCCTCTCCCT 60.043 66.667 0.00 0.00 0.00 4.20
2867 3092 2.043852 TCGCACCTCCTCTCCCTC 60.044 66.667 0.00 0.00 0.00 4.30
2868 3093 2.043450 CGCACCTCCTCTCCCTCT 60.043 66.667 0.00 0.00 0.00 3.69
2869 3094 1.684049 CGCACCTCCTCTCCCTCTT 60.684 63.158 0.00 0.00 0.00 2.85
2870 3095 1.671901 CGCACCTCCTCTCCCTCTTC 61.672 65.000 0.00 0.00 0.00 2.87
2871 3096 1.334384 GCACCTCCTCTCCCTCTTCC 61.334 65.000 0.00 0.00 0.00 3.46
2872 3097 0.338120 CACCTCCTCTCCCTCTTCCT 59.662 60.000 0.00 0.00 0.00 3.36
3187 3561 6.893005 TCCAATATTCCAACCGTTTATTTCCT 59.107 34.615 0.00 0.00 0.00 3.36
3494 3979 2.414481 CACAGGATCTCTTGTTCTTGCG 59.586 50.000 0.00 0.00 33.67 4.85
3495 3980 2.037772 ACAGGATCTCTTGTTCTTGCGT 59.962 45.455 0.00 0.00 31.78 5.24
3544 4063 5.927689 ACTATTCGGTTTAATTCGACACACA 59.072 36.000 0.00 0.00 34.99 3.72
3547 4066 2.096119 CGGTTTAATTCGACACACACCC 60.096 50.000 0.00 0.00 0.00 4.61
3624 4155 4.482386 CATTCAAAGCAGAGTGTCATTGG 58.518 43.478 0.00 0.00 0.00 3.16
3756 4287 2.310538 CAAAAGGTGGACCAGAAAGCT 58.689 47.619 0.00 0.00 38.89 3.74
4494 5046 7.543172 GTGATAACCGTACTTTGTTGTGATCTA 59.457 37.037 0.00 0.00 0.00 1.98
4502 5054 1.438651 TGTTGTGATCTAGTTGGCGC 58.561 50.000 0.00 0.00 0.00 6.53
4660 5212 3.548745 TGTTTCTGAGATGGCGATGAT 57.451 42.857 0.00 0.00 0.00 2.45
4671 5223 6.491062 TGAGATGGCGATGATTTCCATAAATT 59.509 34.615 0.00 0.00 40.43 1.82
4718 5270 7.013083 GCATTTTCTATGAGATGGTGATGTCTT 59.987 37.037 0.00 0.00 0.00 3.01
4858 5410 0.035317 TGTGCACCTGCTAGTCCTTG 59.965 55.000 15.69 0.00 42.66 3.61
4866 5418 4.691216 CACCTGCTAGTCCTTGTTCTAAAC 59.309 45.833 0.00 0.00 0.00 2.01
4867 5419 4.347000 ACCTGCTAGTCCTTGTTCTAAACA 59.653 41.667 0.00 0.00 40.21 2.83
4868 5420 4.932200 CCTGCTAGTCCTTGTTCTAAACAG 59.068 45.833 0.00 0.00 43.27 3.16
4869 5421 5.511545 CCTGCTAGTCCTTGTTCTAAACAGT 60.512 44.000 0.00 0.00 43.27 3.55
4870 5422 5.925509 TGCTAGTCCTTGTTCTAAACAGTT 58.074 37.500 0.00 0.00 43.27 3.16
4871 5423 6.354130 TGCTAGTCCTTGTTCTAAACAGTTT 58.646 36.000 3.49 3.49 43.27 2.66
4872 5424 6.826741 TGCTAGTCCTTGTTCTAAACAGTTTT 59.173 34.615 3.25 0.00 43.27 2.43
4873 5425 7.132863 GCTAGTCCTTGTTCTAAACAGTTTTG 58.867 38.462 3.25 2.20 43.27 2.44
4874 5426 5.891451 AGTCCTTGTTCTAAACAGTTTTGC 58.109 37.500 3.25 0.00 43.27 3.68
4875 5427 5.652452 AGTCCTTGTTCTAAACAGTTTTGCT 59.348 36.000 3.25 0.00 43.27 3.91
4876 5428 6.826741 AGTCCTTGTTCTAAACAGTTTTGCTA 59.173 34.615 3.25 0.00 43.27 3.49
4877 5429 7.338449 AGTCCTTGTTCTAAACAGTTTTGCTAA 59.662 33.333 3.25 0.00 43.27 3.09
4878 5430 7.971722 GTCCTTGTTCTAAACAGTTTTGCTAAA 59.028 33.333 3.25 0.00 43.27 1.85
4879 5431 8.188139 TCCTTGTTCTAAACAGTTTTGCTAAAG 58.812 33.333 3.25 6.42 43.27 1.85
4880 5432 7.043391 CCTTGTTCTAAACAGTTTTGCTAAAGC 60.043 37.037 3.25 0.00 43.27 3.51
4881 5433 6.857956 TGTTCTAAACAGTTTTGCTAAAGCA 58.142 32.000 3.25 0.00 42.44 3.91
4882 5434 6.750039 TGTTCTAAACAGTTTTGCTAAAGCAC 59.250 34.615 3.25 0.00 43.27 4.40
4883 5435 7.575909 TGTTCTAAACAGTTTTGCTAAAGCACA 60.576 33.333 3.25 0.00 43.27 4.57
4906 5458 7.069852 CATCTAGATGTGCCATAAGTATTGC 57.930 40.000 22.42 0.00 34.23 3.56
4907 5459 6.173427 TCTAGATGTGCCATAAGTATTGCA 57.827 37.500 0.00 0.00 32.69 4.08
4915 5467 6.866010 TGCCATAAGTATTGCACATCTAAG 57.134 37.500 0.00 0.00 30.49 2.18
4916 5468 6.356556 TGCCATAAGTATTGCACATCTAAGT 58.643 36.000 0.00 0.00 30.49 2.24
4917 5469 6.483307 TGCCATAAGTATTGCACATCTAAGTC 59.517 38.462 0.00 0.00 30.49 3.01
4918 5470 6.483307 GCCATAAGTATTGCACATCTAAGTCA 59.517 38.462 0.00 0.00 0.00 3.41
4919 5471 7.173907 GCCATAAGTATTGCACATCTAAGTCAT 59.826 37.037 0.00 0.00 0.00 3.06
4920 5472 9.710900 CCATAAGTATTGCACATCTAAGTCATA 57.289 33.333 0.00 0.00 0.00 2.15
4924 5476 8.824159 AGTATTGCACATCTAAGTCATATGTC 57.176 34.615 1.90 0.00 31.60 3.06
4925 5477 8.424133 AGTATTGCACATCTAAGTCATATGTCA 58.576 33.333 1.90 0.00 31.60 3.58
4926 5478 9.212641 GTATTGCACATCTAAGTCATATGTCAT 57.787 33.333 1.90 0.00 31.60 3.06
4927 5479 8.687292 ATTGCACATCTAAGTCATATGTCATT 57.313 30.769 1.90 0.00 31.60 2.57
4928 5480 7.486802 TGCACATCTAAGTCATATGTCATTG 57.513 36.000 1.90 0.00 31.60 2.82
4929 5481 7.274447 TGCACATCTAAGTCATATGTCATTGA 58.726 34.615 1.90 0.00 31.60 2.57
4930 5482 7.935210 TGCACATCTAAGTCATATGTCATTGAT 59.065 33.333 1.90 0.00 31.60 2.57
4931 5483 8.441608 GCACATCTAAGTCATATGTCATTGATC 58.558 37.037 1.90 0.00 31.60 2.92
4932 5484 9.708092 CACATCTAAGTCATATGTCATTGATCT 57.292 33.333 1.90 0.00 31.60 2.75
4966 5518 9.442047 AGATTCGTGTGAATATTTTCTTTCTCT 57.558 29.630 0.00 0.00 44.79 3.10
4997 5549 9.683069 TCTTTTTCTTTTATGCTTGATTCACTC 57.317 29.630 0.00 0.00 0.00 3.51
4998 5550 9.467258 CTTTTTCTTTTATGCTTGATTCACTCA 57.533 29.630 0.00 0.00 0.00 3.41
4999 5551 8.801715 TTTTCTTTTATGCTTGATTCACTCAC 57.198 30.769 0.00 0.00 32.17 3.51
5000 5552 7.750229 TTCTTTTATGCTTGATTCACTCACT 57.250 32.000 0.00 0.00 32.17 3.41
5001 5553 7.750229 TCTTTTATGCTTGATTCACTCACTT 57.250 32.000 0.00 0.00 32.17 3.16
5002 5554 8.846943 TCTTTTATGCTTGATTCACTCACTTA 57.153 30.769 0.00 0.00 32.17 2.24
5003 5555 8.939929 TCTTTTATGCTTGATTCACTCACTTAG 58.060 33.333 0.00 0.00 32.17 2.18
5004 5556 8.846943 TTTTATGCTTGATTCACTCACTTAGA 57.153 30.769 0.00 0.00 32.17 2.10
5005 5557 9.453572 TTTTATGCTTGATTCACTCACTTAGAT 57.546 29.630 0.00 0.00 32.17 1.98
5006 5558 6.922247 ATGCTTGATTCACTCACTTAGATG 57.078 37.500 0.00 0.00 32.17 2.90
5007 5559 5.798132 TGCTTGATTCACTCACTTAGATGT 58.202 37.500 0.00 0.00 32.17 3.06
5008 5560 5.640783 TGCTTGATTCACTCACTTAGATGTG 59.359 40.000 0.00 0.00 39.15 3.21
5009 5561 5.447010 GCTTGATTCACTCACTTAGATGTGC 60.447 44.000 0.00 0.00 37.81 4.57
5010 5562 5.151297 TGATTCACTCACTTAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
5011 5563 5.550290 TGATTCACTCACTTAGATGTGCAA 58.450 37.500 0.00 0.00 37.81 4.08
5012 5564 6.175471 TGATTCACTCACTTAGATGTGCAAT 58.825 36.000 0.00 0.00 37.81 3.56
5013 5565 7.330262 TGATTCACTCACTTAGATGTGCAATA 58.670 34.615 0.00 0.00 37.81 1.90
5014 5566 7.823799 TGATTCACTCACTTAGATGTGCAATAA 59.176 33.333 0.00 0.00 37.81 1.40
5015 5567 6.968131 TCACTCACTTAGATGTGCAATAAC 57.032 37.500 0.00 0.00 37.81 1.89
5016 5568 6.701340 TCACTCACTTAGATGTGCAATAACT 58.299 36.000 0.00 0.00 37.81 2.24
5017 5569 7.836842 TCACTCACTTAGATGTGCAATAACTA 58.163 34.615 0.00 0.00 37.81 2.24
5018 5570 7.976175 TCACTCACTTAGATGTGCAATAACTAG 59.024 37.037 0.00 0.00 37.81 2.57
5019 5571 7.976175 CACTCACTTAGATGTGCAATAACTAGA 59.024 37.037 0.00 0.00 37.81 2.43
5020 5572 8.194104 ACTCACTTAGATGTGCAATAACTAGAG 58.806 37.037 0.00 0.00 37.81 2.43
5021 5573 6.980978 TCACTTAGATGTGCAATAACTAGAGC 59.019 38.462 0.00 0.00 37.81 4.09
5022 5574 6.758416 CACTTAGATGTGCAATAACTAGAGCA 59.242 38.462 0.00 0.00 34.10 4.26
5044 5596 4.250116 CATCTAGATGTGCCCTAGACAC 57.750 50.000 22.42 8.47 43.57 3.67
5048 5600 4.639726 TGTGCCCTAGACACACCT 57.360 55.556 12.81 0.00 42.88 4.00
5049 5601 2.848608 TGTGCCCTAGACACACCTT 58.151 52.632 12.81 0.00 42.88 3.50
5050 5602 2.018355 TGTGCCCTAGACACACCTTA 57.982 50.000 12.81 0.00 42.88 2.69
5051 5603 2.546899 TGTGCCCTAGACACACCTTAT 58.453 47.619 12.81 0.00 42.88 1.73
5052 5604 2.910319 TGTGCCCTAGACACACCTTATT 59.090 45.455 12.81 0.00 42.88 1.40
5053 5605 3.055385 TGTGCCCTAGACACACCTTATTC 60.055 47.826 12.81 0.00 42.88 1.75
5102 5654 4.066646 TCTTGGTTGTTCGAGTTGATGA 57.933 40.909 0.00 0.00 0.00 2.92
5129 5681 6.261826 GGCTTTCTGTTGTCTAGCAATCATAT 59.738 38.462 0.00 0.00 39.55 1.78
5138 5690 9.661187 GTTGTCTAGCAATCATATGAATTTCAG 57.339 33.333 9.99 5.24 39.55 3.02
5139 5691 8.387190 TGTCTAGCAATCATATGAATTTCAGG 57.613 34.615 9.99 0.00 0.00 3.86
5140 5692 7.446319 TGTCTAGCAATCATATGAATTTCAGGG 59.554 37.037 9.99 0.00 0.00 4.45
5141 5693 5.464030 AGCAATCATATGAATTTCAGGGC 57.536 39.130 9.99 0.00 0.00 5.19
5142 5694 5.145564 AGCAATCATATGAATTTCAGGGCT 58.854 37.500 9.99 2.47 0.00 5.19
5143 5695 5.010719 AGCAATCATATGAATTTCAGGGCTG 59.989 40.000 9.99 0.68 0.00 4.85
5144 5696 5.221382 GCAATCATATGAATTTCAGGGCTGT 60.221 40.000 9.99 0.00 0.00 4.40
5145 5697 6.684613 GCAATCATATGAATTTCAGGGCTGTT 60.685 38.462 9.99 0.00 0.00 3.16
5146 5698 7.270047 CAATCATATGAATTTCAGGGCTGTTT 58.730 34.615 9.99 0.00 0.00 2.83
5147 5699 6.211587 TCATATGAATTTCAGGGCTGTTTG 57.788 37.500 1.98 0.00 0.00 2.93
5148 5700 3.967332 ATGAATTTCAGGGCTGTTTGG 57.033 42.857 5.21 0.00 0.00 3.28
5149 5701 2.676748 TGAATTTCAGGGCTGTTTGGT 58.323 42.857 0.00 0.00 0.00 3.67
5150 5702 3.037549 TGAATTTCAGGGCTGTTTGGTT 58.962 40.909 0.00 0.00 0.00 3.67
5151 5703 3.069443 TGAATTTCAGGGCTGTTTGGTTC 59.931 43.478 0.00 0.00 0.00 3.62
5152 5704 1.408969 TTTCAGGGCTGTTTGGTTCC 58.591 50.000 0.00 0.00 0.00 3.62
5153 5705 0.469144 TTCAGGGCTGTTTGGTTCCC 60.469 55.000 0.00 0.00 39.05 3.97
5154 5706 1.152567 CAGGGCTGTTTGGTTCCCA 60.153 57.895 0.00 0.00 41.22 4.37
5155 5707 0.542702 CAGGGCTGTTTGGTTCCCAT 60.543 55.000 0.00 0.00 41.22 4.00
5156 5708 0.251787 AGGGCTGTTTGGTTCCCATC 60.252 55.000 0.00 0.00 41.22 3.51
5157 5709 1.257750 GGGCTGTTTGGTTCCCATCC 61.258 60.000 0.00 0.00 38.62 3.51
5158 5710 0.541764 GGCTGTTTGGTTCCCATCCA 60.542 55.000 0.00 0.00 31.53 3.41
5159 5711 0.603065 GCTGTTTGGTTCCCATCCAC 59.397 55.000 0.00 0.00 34.45 4.02
5160 5712 1.993956 CTGTTTGGTTCCCATCCACA 58.006 50.000 0.00 0.00 34.45 4.17
5161 5713 1.613437 CTGTTTGGTTCCCATCCACAC 59.387 52.381 0.00 0.00 36.52 3.82
5162 5714 1.216678 TGTTTGGTTCCCATCCACACT 59.783 47.619 0.00 0.00 36.81 3.55
5163 5715 2.316108 GTTTGGTTCCCATCCACACTT 58.684 47.619 0.00 0.00 34.14 3.16
5164 5716 2.698274 GTTTGGTTCCCATCCACACTTT 59.302 45.455 0.00 0.00 34.14 2.66
5165 5717 1.993956 TGGTTCCCATCCACACTTTG 58.006 50.000 0.00 0.00 0.00 2.77
5166 5718 0.603065 GGTTCCCATCCACACTTTGC 59.397 55.000 0.00 0.00 0.00 3.68
5167 5719 0.603065 GTTCCCATCCACACTTTGCC 59.397 55.000 0.00 0.00 0.00 4.52
5168 5720 0.187117 TTCCCATCCACACTTTGCCA 59.813 50.000 0.00 0.00 0.00 4.92
5169 5721 0.539438 TCCCATCCACACTTTGCCAC 60.539 55.000 0.00 0.00 0.00 5.01
5170 5722 0.827089 CCCATCCACACTTTGCCACA 60.827 55.000 0.00 0.00 0.00 4.17
5171 5723 0.314935 CCATCCACACTTTGCCACAC 59.685 55.000 0.00 0.00 0.00 3.82
5172 5724 1.321474 CATCCACACTTTGCCACACT 58.679 50.000 0.00 0.00 0.00 3.55
5173 5725 1.682854 CATCCACACTTTGCCACACTT 59.317 47.619 0.00 0.00 0.00 3.16
5174 5726 2.719531 TCCACACTTTGCCACACTTA 57.280 45.000 0.00 0.00 0.00 2.24
5175 5727 3.006112 TCCACACTTTGCCACACTTAA 57.994 42.857 0.00 0.00 0.00 1.85
5176 5728 2.685897 TCCACACTTTGCCACACTTAAC 59.314 45.455 0.00 0.00 0.00 2.01
5177 5729 2.223711 CCACACTTTGCCACACTTAACC 60.224 50.000 0.00 0.00 0.00 2.85
5178 5730 2.687935 CACACTTTGCCACACTTAACCT 59.312 45.455 0.00 0.00 0.00 3.50
5179 5731 3.130340 CACACTTTGCCACACTTAACCTT 59.870 43.478 0.00 0.00 0.00 3.50
5180 5732 4.336993 CACACTTTGCCACACTTAACCTTA 59.663 41.667 0.00 0.00 0.00 2.69
5181 5733 4.578928 ACACTTTGCCACACTTAACCTTAG 59.421 41.667 0.00 0.00 0.00 2.18
5182 5734 4.819630 CACTTTGCCACACTTAACCTTAGA 59.180 41.667 0.00 0.00 0.00 2.10
5183 5735 4.820173 ACTTTGCCACACTTAACCTTAGAC 59.180 41.667 0.00 0.00 0.00 2.59
5184 5736 4.425180 TTGCCACACTTAACCTTAGACA 57.575 40.909 0.00 0.00 0.00 3.41
5185 5737 4.425180 TGCCACACTTAACCTTAGACAA 57.575 40.909 0.00 0.00 0.00 3.18
5186 5738 4.385825 TGCCACACTTAACCTTAGACAAG 58.614 43.478 0.00 0.00 0.00 3.16
5187 5739 4.141574 TGCCACACTTAACCTTAGACAAGT 60.142 41.667 0.00 0.00 0.00 3.16
5188 5740 4.820173 GCCACACTTAACCTTAGACAAGTT 59.180 41.667 0.00 0.00 0.00 2.66
5189 5741 5.298527 GCCACACTTAACCTTAGACAAGTTT 59.701 40.000 0.00 0.00 0.00 2.66
5190 5742 6.725246 CCACACTTAACCTTAGACAAGTTTG 58.275 40.000 0.00 0.00 31.57 2.93
5191 5743 6.540914 CCACACTTAACCTTAGACAAGTTTGA 59.459 38.462 0.00 0.00 32.85 2.69
5192 5744 7.407337 CACACTTAACCTTAGACAAGTTTGAC 58.593 38.462 0.00 0.00 32.85 3.18
5193 5745 6.541278 ACACTTAACCTTAGACAAGTTTGACC 59.459 38.462 0.00 0.00 0.00 4.02
5194 5746 6.540914 CACTTAACCTTAGACAAGTTTGACCA 59.459 38.462 0.00 0.00 0.00 4.02
5195 5747 7.066525 CACTTAACCTTAGACAAGTTTGACCAA 59.933 37.037 0.00 0.00 0.00 3.67
5196 5748 7.282450 ACTTAACCTTAGACAAGTTTGACCAAG 59.718 37.037 0.00 0.00 0.00 3.61
5197 5749 5.112129 ACCTTAGACAAGTTTGACCAAGT 57.888 39.130 0.00 0.00 0.00 3.16
5198 5750 5.506708 ACCTTAGACAAGTTTGACCAAGTT 58.493 37.500 0.00 0.00 0.00 2.66
5199 5751 6.655930 ACCTTAGACAAGTTTGACCAAGTTA 58.344 36.000 0.00 0.00 0.00 2.24
5200 5752 6.766467 ACCTTAGACAAGTTTGACCAAGTTAG 59.234 38.462 0.00 0.00 0.00 2.34
5201 5753 6.204882 CCTTAGACAAGTTTGACCAAGTTAGG 59.795 42.308 0.00 0.00 0.00 2.69
5202 5754 5.112129 AGACAAGTTTGACCAAGTTAGGT 57.888 39.130 0.00 0.00 46.82 3.08
5203 5755 6.243216 AGACAAGTTTGACCAAGTTAGGTA 57.757 37.500 0.00 0.00 43.38 3.08
5204 5756 6.289064 AGACAAGTTTGACCAAGTTAGGTAG 58.711 40.000 0.00 0.00 43.38 3.18
5205 5757 5.374071 ACAAGTTTGACCAAGTTAGGTAGG 58.626 41.667 0.00 0.00 43.38 3.18
5206 5758 5.104235 ACAAGTTTGACCAAGTTAGGTAGGT 60.104 40.000 0.00 0.00 43.38 3.08
5207 5759 4.969484 AGTTTGACCAAGTTAGGTAGGTG 58.031 43.478 0.00 0.00 43.38 4.00
5208 5760 4.411212 AGTTTGACCAAGTTAGGTAGGTGT 59.589 41.667 0.00 0.00 43.38 4.16
5209 5761 5.104235 AGTTTGACCAAGTTAGGTAGGTGTT 60.104 40.000 0.00 0.00 43.38 3.32
5210 5762 5.376756 TTGACCAAGTTAGGTAGGTGTTT 57.623 39.130 0.00 0.00 43.38 2.83
5211 5763 4.710324 TGACCAAGTTAGGTAGGTGTTTG 58.290 43.478 0.00 0.00 43.38 2.93
5212 5764 4.070009 GACCAAGTTAGGTAGGTGTTTGG 58.930 47.826 0.00 0.00 43.38 3.28
5213 5765 3.460712 ACCAAGTTAGGTAGGTGTTTGGT 59.539 43.478 0.44 0.44 40.98 3.67
5214 5766 4.079615 ACCAAGTTAGGTAGGTGTTTGGTT 60.080 41.667 0.44 0.00 42.92 3.67
5215 5767 4.517832 CCAAGTTAGGTAGGTGTTTGGTTC 59.482 45.833 0.00 0.00 31.33 3.62
5216 5768 5.374071 CAAGTTAGGTAGGTGTTTGGTTCT 58.626 41.667 0.00 0.00 0.00 3.01
5217 5769 6.464749 CCAAGTTAGGTAGGTGTTTGGTTCTA 60.465 42.308 0.00 0.00 31.33 2.10
5218 5770 6.356186 AGTTAGGTAGGTGTTTGGTTCTAG 57.644 41.667 0.00 0.00 0.00 2.43
5219 5771 3.697619 AGGTAGGTGTTTGGTTCTAGC 57.302 47.619 0.00 0.00 0.00 3.42
5220 5772 2.305052 AGGTAGGTGTTTGGTTCTAGCC 59.695 50.000 0.00 0.00 32.51 3.93
5221 5773 2.039348 GGTAGGTGTTTGGTTCTAGCCA 59.961 50.000 0.00 0.00 36.62 4.75
5222 5774 2.271944 AGGTGTTTGGTTCTAGCCAC 57.728 50.000 0.00 0.00 38.42 5.01
5223 5775 1.493022 AGGTGTTTGGTTCTAGCCACA 59.507 47.619 0.00 0.00 38.42 4.17
5224 5776 1.607148 GGTGTTTGGTTCTAGCCACAC 59.393 52.381 0.16 0.16 39.10 3.82
5225 5777 1.607148 GTGTTTGGTTCTAGCCACACC 59.393 52.381 3.97 0.00 38.17 4.16
5226 5778 1.493022 TGTTTGGTTCTAGCCACACCT 59.507 47.619 3.97 0.00 38.17 4.00
5227 5779 2.706723 TGTTTGGTTCTAGCCACACCTA 59.293 45.455 3.97 0.00 38.17 3.08
5228 5780 3.136809 TGTTTGGTTCTAGCCACACCTAA 59.863 43.478 3.97 0.22 38.17 2.69
5229 5781 3.695830 TTGGTTCTAGCCACACCTAAG 57.304 47.619 0.00 0.00 38.42 2.18
5230 5782 1.906574 TGGTTCTAGCCACACCTAAGG 59.093 52.381 0.00 0.00 32.81 2.69
5238 5790 2.514458 CCACACCTAAGGCAAGGATT 57.486 50.000 12.37 0.00 39.15 3.01
5239 5791 2.807676 CCACACCTAAGGCAAGGATTT 58.192 47.619 12.37 0.00 39.15 2.17
5240 5792 3.165071 CCACACCTAAGGCAAGGATTTT 58.835 45.455 12.37 0.00 39.15 1.82
5241 5793 3.578282 CCACACCTAAGGCAAGGATTTTT 59.422 43.478 12.37 0.00 39.15 1.94
5261 5813 3.517296 TTTTATGAGCAGTGAACCCCA 57.483 42.857 0.00 0.00 0.00 4.96
5262 5814 2.489938 TTATGAGCAGTGAACCCCAC 57.510 50.000 0.00 0.00 46.03 4.61
5272 5824 3.627395 GTGAACCCCACATGTCATAGA 57.373 47.619 0.00 0.00 45.03 1.98
5273 5825 3.270877 GTGAACCCCACATGTCATAGAC 58.729 50.000 0.00 0.00 45.03 2.59
5274 5826 2.909662 TGAACCCCACATGTCATAGACA 59.090 45.455 0.00 1.95 46.90 3.41
5275 5827 3.270877 GAACCCCACATGTCATAGACAC 58.729 50.000 0.00 0.00 45.65 3.67
5276 5828 2.265367 ACCCCACATGTCATAGACACA 58.735 47.619 0.00 0.00 45.65 3.72
5277 5829 2.642311 ACCCCACATGTCATAGACACAA 59.358 45.455 0.00 0.00 45.65 3.33
5278 5830 3.073798 ACCCCACATGTCATAGACACAAA 59.926 43.478 0.00 0.00 45.65 2.83
5279 5831 4.078537 CCCCACATGTCATAGACACAAAA 58.921 43.478 0.00 0.00 45.65 2.44
5280 5832 4.522405 CCCCACATGTCATAGACACAAAAA 59.478 41.667 0.00 0.00 45.65 1.94
5281 5833 5.335897 CCCCACATGTCATAGACACAAAAAG 60.336 44.000 0.00 0.00 45.65 2.27
5282 5834 5.241506 CCCACATGTCATAGACACAAAAAGT 59.758 40.000 0.00 0.00 45.65 2.66
5295 5847 4.058721 ACAAAAAGTGTGGCAAGATTCC 57.941 40.909 0.00 0.00 39.72 3.01
5296 5848 3.181466 ACAAAAAGTGTGGCAAGATTCCC 60.181 43.478 0.00 0.00 39.72 3.97
5297 5849 2.683211 AAAGTGTGGCAAGATTCCCT 57.317 45.000 0.00 0.00 0.00 4.20
5298 5850 2.683211 AAGTGTGGCAAGATTCCCTT 57.317 45.000 0.00 0.00 34.91 3.95
5299 5851 3.806949 AAGTGTGGCAAGATTCCCTTA 57.193 42.857 0.00 0.00 32.86 2.69
5300 5852 3.356529 AGTGTGGCAAGATTCCCTTAG 57.643 47.619 0.00 0.00 32.86 2.18
5301 5853 2.025887 AGTGTGGCAAGATTCCCTTAGG 60.026 50.000 0.00 0.00 32.86 2.69
5302 5854 1.340991 TGTGGCAAGATTCCCTTAGGC 60.341 52.381 0.00 0.00 32.86 3.93
5303 5855 0.998928 TGGCAAGATTCCCTTAGGCA 59.001 50.000 0.00 0.00 36.71 4.75
5304 5856 1.357420 TGGCAAGATTCCCTTAGGCAA 59.643 47.619 0.00 0.00 36.41 4.52
5305 5857 2.027385 GGCAAGATTCCCTTAGGCAAG 58.973 52.381 0.00 0.00 32.86 4.01
5306 5858 1.406898 GCAAGATTCCCTTAGGCAAGC 59.593 52.381 0.00 0.00 32.86 4.01
5307 5859 2.027385 CAAGATTCCCTTAGGCAAGCC 58.973 52.381 2.02 2.02 32.86 4.35
5308 5860 1.298953 AGATTCCCTTAGGCAAGCCA 58.701 50.000 14.40 0.00 38.92 4.75
5309 5861 1.640670 AGATTCCCTTAGGCAAGCCAA 59.359 47.619 14.40 4.98 38.92 4.52
5310 5862 2.042979 AGATTCCCTTAGGCAAGCCAAA 59.957 45.455 14.40 0.00 38.92 3.28
5311 5863 1.923356 TTCCCTTAGGCAAGCCAAAG 58.077 50.000 14.40 0.00 38.92 2.77
5312 5864 0.777446 TCCCTTAGGCAAGCCAAAGT 59.223 50.000 14.40 0.00 38.92 2.66
5313 5865 0.890683 CCCTTAGGCAAGCCAAAGTG 59.109 55.000 14.40 0.00 38.92 3.16
5314 5866 1.620822 CCTTAGGCAAGCCAAAGTGT 58.379 50.000 14.40 0.00 38.92 3.55
5315 5867 1.270550 CCTTAGGCAAGCCAAAGTGTG 59.729 52.381 14.40 0.00 38.92 3.82
5330 5882 3.923017 AGTGTGGCTAACAATTTGAGC 57.077 42.857 2.79 2.51 41.57 4.26
5331 5883 3.221771 AGTGTGGCTAACAATTTGAGCA 58.778 40.909 2.79 0.00 41.57 4.26
5332 5884 3.636300 AGTGTGGCTAACAATTTGAGCAA 59.364 39.130 2.79 0.00 41.57 3.91
5333 5885 3.735746 GTGTGGCTAACAATTTGAGCAAC 59.264 43.478 9.59 9.59 41.57 4.17
5334 5886 3.636300 TGTGGCTAACAATTTGAGCAACT 59.364 39.130 15.05 0.00 40.27 3.16
5335 5887 4.229876 GTGGCTAACAATTTGAGCAACTC 58.770 43.478 2.79 0.00 37.21 3.01
5336 5888 3.888323 TGGCTAACAATTTGAGCAACTCA 59.112 39.130 2.79 0.00 38.87 3.41
5337 5889 4.340666 TGGCTAACAATTTGAGCAACTCAA 59.659 37.500 5.94 5.94 46.93 3.02
5338 5890 9.957407 TGTGGCTAACAATTTGAGCAACTCAAC 62.957 40.741 15.05 0.00 41.90 3.18
5347 5899 5.991328 TTGAGCAACTCAACTAAGACAAG 57.009 39.130 5.94 0.00 44.27 3.16
5348 5900 5.023533 TGAGCAACTCAACTAAGACAAGT 57.976 39.130 0.00 0.00 37.57 3.16
5349 5901 4.811024 TGAGCAACTCAACTAAGACAAGTG 59.189 41.667 0.00 0.00 37.57 3.16
5350 5902 4.770795 AGCAACTCAACTAAGACAAGTGT 58.229 39.130 0.00 0.00 0.00 3.55
5351 5903 5.914033 AGCAACTCAACTAAGACAAGTGTA 58.086 37.500 0.00 0.00 0.00 2.90
5352 5904 5.986135 AGCAACTCAACTAAGACAAGTGTAG 59.014 40.000 0.00 0.00 0.00 2.74
5353 5905 5.333416 GCAACTCAACTAAGACAAGTGTAGC 60.333 44.000 0.00 0.00 0.00 3.58
5354 5906 5.531122 ACTCAACTAAGACAAGTGTAGCA 57.469 39.130 0.00 0.00 0.00 3.49
5355 5907 5.914033 ACTCAACTAAGACAAGTGTAGCAA 58.086 37.500 0.00 0.00 0.00 3.91
5356 5908 6.346096 ACTCAACTAAGACAAGTGTAGCAAA 58.654 36.000 0.00 0.00 0.00 3.68
5357 5909 6.821665 ACTCAACTAAGACAAGTGTAGCAAAA 59.178 34.615 0.00 0.00 0.00 2.44
5358 5910 7.335924 ACTCAACTAAGACAAGTGTAGCAAAAA 59.664 33.333 0.00 0.00 0.00 1.94
5390 5942 6.002062 GCAATATATGGCAAAGGTAGTCAC 57.998 41.667 7.25 0.00 0.00 3.67
5391 5943 5.530915 GCAATATATGGCAAAGGTAGTCACA 59.469 40.000 7.25 0.00 0.00 3.58
5392 5944 6.039270 GCAATATATGGCAAAGGTAGTCACAA 59.961 38.462 7.25 0.00 0.00 3.33
5393 5945 7.255590 GCAATATATGGCAAAGGTAGTCACAAT 60.256 37.037 7.25 0.00 0.00 2.71
5394 5946 7.986085 ATATATGGCAAAGGTAGTCACAATC 57.014 36.000 0.00 0.00 0.00 2.67
5395 5947 2.790433 TGGCAAAGGTAGTCACAATCC 58.210 47.619 0.00 0.00 0.00 3.01
5396 5948 2.107378 TGGCAAAGGTAGTCACAATCCA 59.893 45.455 0.00 0.00 0.00 3.41
5397 5949 3.153919 GGCAAAGGTAGTCACAATCCAA 58.846 45.455 0.00 0.00 0.00 3.53
5398 5950 3.572255 GGCAAAGGTAGTCACAATCCAAA 59.428 43.478 0.00 0.00 0.00 3.28
5399 5951 4.546570 GCAAAGGTAGTCACAATCCAAAC 58.453 43.478 0.00 0.00 0.00 2.93
5400 5952 4.037446 GCAAAGGTAGTCACAATCCAAACA 59.963 41.667 0.00 0.00 0.00 2.83
5401 5953 5.451242 GCAAAGGTAGTCACAATCCAAACAA 60.451 40.000 0.00 0.00 0.00 2.83
5402 5954 5.767816 AAGGTAGTCACAATCCAAACAAC 57.232 39.130 0.00 0.00 0.00 3.32
5403 5955 4.142038 AGGTAGTCACAATCCAAACAACC 58.858 43.478 0.00 0.00 0.00 3.77
5404 5956 3.254903 GGTAGTCACAATCCAAACAACCC 59.745 47.826 0.00 0.00 0.00 4.11
5405 5957 2.316108 AGTCACAATCCAAACAACCCC 58.684 47.619 0.00 0.00 0.00 4.95
5406 5958 2.091333 AGTCACAATCCAAACAACCCCT 60.091 45.455 0.00 0.00 0.00 4.79
5407 5959 2.698274 GTCACAATCCAAACAACCCCTT 59.302 45.455 0.00 0.00 0.00 3.95
5408 5960 2.962421 TCACAATCCAAACAACCCCTTC 59.038 45.455 0.00 0.00 0.00 3.46
5409 5961 2.697751 CACAATCCAAACAACCCCTTCA 59.302 45.455 0.00 0.00 0.00 3.02
5410 5962 3.324556 CACAATCCAAACAACCCCTTCAT 59.675 43.478 0.00 0.00 0.00 2.57
5411 5963 4.526262 CACAATCCAAACAACCCCTTCATA 59.474 41.667 0.00 0.00 0.00 2.15
5412 5964 5.187576 CACAATCCAAACAACCCCTTCATAT 59.812 40.000 0.00 0.00 0.00 1.78
5413 5965 5.422012 ACAATCCAAACAACCCCTTCATATC 59.578 40.000 0.00 0.00 0.00 1.63
5414 5966 4.666412 TCCAAACAACCCCTTCATATCA 57.334 40.909 0.00 0.00 0.00 2.15
5415 5967 5.004361 TCCAAACAACCCCTTCATATCAA 57.996 39.130 0.00 0.00 0.00 2.57
5416 5968 5.588845 TCCAAACAACCCCTTCATATCAAT 58.411 37.500 0.00 0.00 0.00 2.57
5417 5969 6.736581 TCCAAACAACCCCTTCATATCAATA 58.263 36.000 0.00 0.00 0.00 1.90
5418 5970 7.185565 TCCAAACAACCCCTTCATATCAATAA 58.814 34.615 0.00 0.00 0.00 1.40
5419 5971 7.676043 TCCAAACAACCCCTTCATATCAATAAA 59.324 33.333 0.00 0.00 0.00 1.40
5420 5972 7.981225 CCAAACAACCCCTTCATATCAATAAAG 59.019 37.037 0.00 0.00 0.00 1.85
5421 5973 8.531146 CAAACAACCCCTTCATATCAATAAAGT 58.469 33.333 0.00 0.00 0.00 2.66
5422 5974 8.664669 AACAACCCCTTCATATCAATAAAGTT 57.335 30.769 0.00 0.00 0.00 2.66
5423 5975 8.066612 ACAACCCCTTCATATCAATAAAGTTG 57.933 34.615 0.00 0.00 36.63 3.16
5424 5976 7.893302 ACAACCCCTTCATATCAATAAAGTTGA 59.107 33.333 0.00 0.00 35.07 3.18
5425 5977 8.408601 CAACCCCTTCATATCAATAAAGTTGAG 58.591 37.037 0.00 0.00 33.34 3.02
5426 5978 6.547510 ACCCCTTCATATCAATAAAGTTGAGC 59.452 38.462 0.00 0.00 0.00 4.26
5427 5979 6.774656 CCCCTTCATATCAATAAAGTTGAGCT 59.225 38.462 0.00 0.00 0.00 4.09
5428 5980 7.255381 CCCCTTCATATCAATAAAGTTGAGCTG 60.255 40.741 0.00 0.00 0.00 4.24
5429 5981 7.284034 CCCTTCATATCAATAAAGTTGAGCTGT 59.716 37.037 0.00 0.00 0.00 4.40
5430 5982 8.127327 CCTTCATATCAATAAAGTTGAGCTGTG 58.873 37.037 0.00 0.00 0.00 3.66
5431 5983 8.791327 TTCATATCAATAAAGTTGAGCTGTGA 57.209 30.769 0.00 0.00 0.00 3.58
5432 5984 8.791327 TCATATCAATAAAGTTGAGCTGTGAA 57.209 30.769 0.00 0.00 0.00 3.18
5433 5985 9.230122 TCATATCAATAAAGTTGAGCTGTGAAA 57.770 29.630 0.00 0.00 0.00 2.69
5438 5990 7.970061 TCAATAAAGTTGAGCTGTGAAATATGC 59.030 33.333 0.00 0.00 0.00 3.14
5439 5991 5.972107 AAAGTTGAGCTGTGAAATATGCT 57.028 34.783 0.00 0.00 38.59 3.79
5440 5992 5.972107 AAGTTGAGCTGTGAAATATGCTT 57.028 34.783 0.00 0.00 35.76 3.91
5441 5993 5.972107 AGTTGAGCTGTGAAATATGCTTT 57.028 34.783 0.00 0.00 35.76 3.51
5442 5994 7.452880 AAGTTGAGCTGTGAAATATGCTTTA 57.547 32.000 0.00 0.00 35.76 1.85
5443 5995 7.081526 AGTTGAGCTGTGAAATATGCTTTAG 57.918 36.000 0.00 0.00 35.76 1.85
5444 5996 5.490139 TGAGCTGTGAAATATGCTTTAGC 57.510 39.130 0.00 0.00 42.50 3.09
5455 6007 3.760693 GCTTTAGCACGATCCTCCA 57.239 52.632 0.00 0.00 41.59 3.86
5456 6008 2.246719 GCTTTAGCACGATCCTCCAT 57.753 50.000 0.00 0.00 41.59 3.41
5457 6009 1.869767 GCTTTAGCACGATCCTCCATG 59.130 52.381 0.00 0.00 41.59 3.66
5458 6010 2.743183 GCTTTAGCACGATCCTCCATGT 60.743 50.000 0.00 0.00 41.59 3.21
5459 6011 3.535561 CTTTAGCACGATCCTCCATGTT 58.464 45.455 0.00 0.00 0.00 2.71
5460 6012 3.627395 TTAGCACGATCCTCCATGTTT 57.373 42.857 0.00 0.00 0.00 2.83
5461 6013 4.746535 TTAGCACGATCCTCCATGTTTA 57.253 40.909 0.00 0.00 0.00 2.01
5462 6014 3.845781 AGCACGATCCTCCATGTTTAT 57.154 42.857 0.00 0.00 0.00 1.40
5463 6015 4.156455 AGCACGATCCTCCATGTTTATT 57.844 40.909 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 5.113383 TGGATGGTAGTGCTATTACAAACG 58.887 41.667 0.00 0.00 0.00 3.60
135 136 9.844257 ATATCCAAATCTTTCGATTCTCTTTCT 57.156 29.630 0.00 0.00 38.89 2.52
152 153 8.258007 TCTTCGTCAAGTTAGACATATCCAAAT 58.742 33.333 0.00 0.00 38.43 2.32
266 267 3.798878 GCTTGTCGAGATGAATCAATCGA 59.201 43.478 16.48 16.48 41.51 3.59
267 268 3.801050 AGCTTGTCGAGATGAATCAATCG 59.199 43.478 12.99 12.99 36.54 3.34
366 367 5.877564 GGTAGAAGAAATTGGAGACTTCAGG 59.122 44.000 0.00 0.00 40.47 3.86
422 423 5.606505 GGGGTTTTGCTAAATTGAACAAGA 58.393 37.500 0.00 0.00 0.00 3.02
477 478 8.385858 CAGATAATAAAGTATGATGTCATGGCG 58.614 37.037 5.78 0.00 37.15 5.69
504 505 5.650266 TGGTGTTTTCTTCTACAAAGCTTGA 59.350 36.000 0.00 0.00 0.00 3.02
513 514 7.859325 TGGCTATATTGGTGTTTTCTTCTAC 57.141 36.000 0.00 0.00 0.00 2.59
515 516 6.260936 CGATGGCTATATTGGTGTTTTCTTCT 59.739 38.462 0.00 0.00 0.00 2.85
523 524 2.859165 CCCGATGGCTATATTGGTGT 57.141 50.000 0.00 0.00 30.76 4.16
559 560 2.587307 AGGTTATCAAGGAAATGCCCCT 59.413 45.455 0.00 0.00 37.37 4.79
561 562 2.101415 GCAGGTTATCAAGGAAATGCCC 59.899 50.000 0.00 0.00 37.37 5.36
605 606 2.866762 GTGTTTTCTCACTCTCTGCGTT 59.133 45.455 0.00 0.00 35.68 4.84
623 624 2.285442 GGCCCCTCACCCTAGTGT 60.285 66.667 0.00 0.00 44.83 3.55
645 646 3.434258 GCAAGGGGGTAATTTTGCG 57.566 52.632 0.00 0.00 36.89 4.85
665 666 0.895559 GTGGAGGGCTTTGAGGTTGG 60.896 60.000 0.00 0.00 0.00 3.77
666 667 0.895559 GGTGGAGGGCTTTGAGGTTG 60.896 60.000 0.00 0.00 0.00 3.77
667 668 1.460699 GGTGGAGGGCTTTGAGGTT 59.539 57.895 0.00 0.00 0.00 3.50
668 669 2.895424 CGGTGGAGGGCTTTGAGGT 61.895 63.158 0.00 0.00 0.00 3.85
669 670 2.045926 CGGTGGAGGGCTTTGAGG 60.046 66.667 0.00 0.00 0.00 3.86
670 671 1.376037 GACGGTGGAGGGCTTTGAG 60.376 63.158 0.00 0.00 0.00 3.02
671 672 2.144078 TGACGGTGGAGGGCTTTGA 61.144 57.895 0.00 0.00 0.00 2.69
672 673 1.966451 GTGACGGTGGAGGGCTTTG 60.966 63.158 0.00 0.00 0.00 2.77
673 674 2.430367 GTGACGGTGGAGGGCTTT 59.570 61.111 0.00 0.00 0.00 3.51
752 760 1.752198 CCGGTCTGGTGTTCCTTCA 59.248 57.895 0.00 0.00 34.23 3.02
759 767 4.640690 AGGAGGCCGGTCTGGTGT 62.641 66.667 16.74 0.00 41.21 4.16
824 842 3.157949 GCGGAAGAGGGAGAGGGG 61.158 72.222 0.00 0.00 0.00 4.79
848 870 3.880846 GCAGCGGAATTCAGGCGG 61.881 66.667 7.93 11.48 0.00 6.13
853 875 2.671914 GCAAATGAAGCAGCGGAATTCA 60.672 45.455 7.93 7.23 37.36 2.57
861 883 0.171007 TTAGGCGCAAATGAAGCAGC 59.829 50.000 10.83 0.00 0.00 5.25
862 884 2.724349 GATTAGGCGCAAATGAAGCAG 58.276 47.619 10.83 0.00 0.00 4.24
896 918 3.844211 AGTAAACCCTAGAATGACCAGCA 59.156 43.478 0.00 0.00 0.00 4.41
1248 1271 1.408702 GCGAGCTCTTTCCTCAGAGAT 59.591 52.381 12.85 0.00 42.36 2.75
1322 1345 3.723097 ATCTCCTGCTCCTCGGCGA 62.723 63.158 10.14 10.14 34.52 5.54
1389 1412 0.456312 CCGCCTTGACAGACTCGTAC 60.456 60.000 0.00 0.00 0.00 3.67
1538 1561 0.547075 AGCAGCATCAAGATCAGCCT 59.453 50.000 0.00 0.00 0.00 4.58
1668 1691 4.225042 TCATACTCATATGCGGCCCTAAAT 59.775 41.667 0.00 0.00 38.50 1.40
2299 2323 5.527951 ACGTCAACAAATTAACATGCACAT 58.472 33.333 0.00 0.00 0.00 3.21
2551 2576 8.503428 AATTATCTCTCTCTCTCTCTCTCTCT 57.497 38.462 0.00 0.00 0.00 3.10
2557 2582 9.920946 AGTGTTTAATTATCTCTCTCTCTCTCT 57.079 33.333 0.00 0.00 0.00 3.10
2558 2583 9.950680 CAGTGTTTAATTATCTCTCTCTCTCTC 57.049 37.037 0.00 0.00 0.00 3.20
2559 2584 9.474313 ACAGTGTTTAATTATCTCTCTCTCTCT 57.526 33.333 0.00 0.00 0.00 3.10
2601 2626 5.112686 GGACTTAAGTACTCAAGCCAGATG 58.887 45.833 10.83 0.00 0.00 2.90
2808 3033 1.583495 CTGACTCTGCACGTACGGGA 61.583 60.000 24.33 9.74 0.00 5.14
2815 3040 2.057316 CTTTCTGTCTGACTCTGCACG 58.943 52.381 9.51 0.00 0.00 5.34
2845 3070 2.043450 AGAGGAGGTGCGAGGAGG 60.043 66.667 0.00 0.00 0.00 4.30
2853 3078 0.338120 AGGAAGAGGGAGAGGAGGTG 59.662 60.000 0.00 0.00 0.00 4.00
2854 3079 0.634465 GAGGAAGAGGGAGAGGAGGT 59.366 60.000 0.00 0.00 0.00 3.85
2857 3082 1.850345 GAGAGAGGAAGAGGGAGAGGA 59.150 57.143 0.00 0.00 0.00 3.71
2860 3085 0.930726 GGGAGAGAGGAAGAGGGAGA 59.069 60.000 0.00 0.00 0.00 3.71
2861 3086 0.933700 AGGGAGAGAGGAAGAGGGAG 59.066 60.000 0.00 0.00 0.00 4.30
2862 3087 1.398799 AAGGGAGAGAGGAAGAGGGA 58.601 55.000 0.00 0.00 0.00 4.20
2863 3088 1.836802 CAAAGGGAGAGAGGAAGAGGG 59.163 57.143 0.00 0.00 0.00 4.30
2864 3089 1.209261 GCAAAGGGAGAGAGGAAGAGG 59.791 57.143 0.00 0.00 0.00 3.69
2865 3090 2.093553 CAGCAAAGGGAGAGAGGAAGAG 60.094 54.545 0.00 0.00 0.00 2.85
2866 3091 1.905215 CAGCAAAGGGAGAGAGGAAGA 59.095 52.381 0.00 0.00 0.00 2.87
2867 3092 1.678425 GCAGCAAAGGGAGAGAGGAAG 60.678 57.143 0.00 0.00 0.00 3.46
2868 3093 0.326264 GCAGCAAAGGGAGAGAGGAA 59.674 55.000 0.00 0.00 0.00 3.36
2869 3094 0.837691 TGCAGCAAAGGGAGAGAGGA 60.838 55.000 0.00 0.00 0.00 3.71
2870 3095 0.676151 GTGCAGCAAAGGGAGAGAGG 60.676 60.000 0.00 0.00 0.00 3.69
2871 3096 0.676151 GGTGCAGCAAAGGGAGAGAG 60.676 60.000 11.86 0.00 0.00 3.20
2872 3097 1.376466 GGTGCAGCAAAGGGAGAGA 59.624 57.895 11.86 0.00 0.00 3.10
2974 3348 2.795329 CATAACACCTCACTTTGGCCT 58.205 47.619 3.32 0.00 0.00 5.19
2983 3357 1.943968 GCAACTCGGCATAACACCTCA 60.944 52.381 0.00 0.00 0.00 3.86
3057 3431 6.765403 ACCAAGTGTGACTTAAGCATAGTTA 58.235 36.000 1.29 0.00 36.03 2.24
3091 3465 9.020731 CCTTGTGTTCTTTAATTTAGTGGGTAT 57.979 33.333 0.00 0.00 0.00 2.73
3187 3561 8.900983 ATAATGCCTTTTAAAGTTGCAAAAGA 57.099 26.923 18.10 5.98 41.98 2.52
3474 3959 2.037772 ACGCAAGAACAAGAGATCCTGT 59.962 45.455 0.00 0.00 43.62 4.00
3544 4063 1.989586 TGTTATAGTTGGTGGCTGGGT 59.010 47.619 0.00 0.00 0.00 4.51
3547 4066 4.009675 ACATGTGTTATAGTTGGTGGCTG 58.990 43.478 0.00 0.00 0.00 4.85
3775 4306 9.676195 CACAATTTATATTATTGTCGCAATGGA 57.324 29.630 13.17 4.83 42.63 3.41
3853 4384 3.259123 AGCCTGGATCCACAAAACAATTC 59.741 43.478 11.44 0.00 0.00 2.17
4276 4828 2.771372 TGTGCATAAGATGGAGCCTGTA 59.229 45.455 0.00 0.00 0.00 2.74
4494 5046 1.446792 CATGTCTCTCGCGCCAACT 60.447 57.895 0.00 0.00 0.00 3.16
4502 5054 3.260483 GCAGCGCCATGTCTCTCG 61.260 66.667 2.29 0.00 0.00 4.04
4660 5212 7.504403 ACCATCACAACACAAATTTATGGAAA 58.496 30.769 15.85 0.00 36.86 3.13
4671 5223 5.724328 TGCTTTAAAACCATCACAACACAA 58.276 33.333 0.00 0.00 0.00 3.33
4718 5270 4.967084 TGTTACTTCTTGCCTAACCTCA 57.033 40.909 0.00 0.00 0.00 3.86
4892 5444 6.356556 ACTTAGATGTGCAATACTTATGGCA 58.643 36.000 0.00 0.00 40.19 4.92
4893 5445 6.483307 TGACTTAGATGTGCAATACTTATGGC 59.517 38.462 0.00 0.00 33.16 4.40
4894 5446 8.613060 ATGACTTAGATGTGCAATACTTATGG 57.387 34.615 0.00 0.00 0.00 2.74
4898 5450 9.265901 GACATATGACTTAGATGTGCAATACTT 57.734 33.333 10.38 0.00 41.09 2.24
4899 5451 8.424133 TGACATATGACTTAGATGTGCAATACT 58.576 33.333 10.38 0.00 41.09 2.12
4900 5452 8.593492 TGACATATGACTTAGATGTGCAATAC 57.407 34.615 10.38 0.00 41.09 1.89
4901 5453 9.783081 AATGACATATGACTTAGATGTGCAATA 57.217 29.630 10.38 0.00 41.09 1.90
4902 5454 8.565416 CAATGACATATGACTTAGATGTGCAAT 58.435 33.333 10.38 0.00 41.09 3.56
4903 5455 7.769970 TCAATGACATATGACTTAGATGTGCAA 59.230 33.333 10.38 0.00 41.09 4.08
4904 5456 7.274447 TCAATGACATATGACTTAGATGTGCA 58.726 34.615 10.38 0.00 41.09 4.57
4905 5457 7.719778 TCAATGACATATGACTTAGATGTGC 57.280 36.000 10.38 0.00 41.09 4.57
4906 5458 9.708092 AGATCAATGACATATGACTTAGATGTG 57.292 33.333 10.38 0.00 41.09 3.21
4940 5492 9.442047 AGAGAAAGAAAATATTCACACGAATCT 57.558 29.630 0.00 0.00 41.09 2.40
4971 5523 9.683069 GAGTGAATCAAGCATAAAAGAAAAAGA 57.317 29.630 0.00 0.00 0.00 2.52
4972 5524 9.467258 TGAGTGAATCAAGCATAAAAGAAAAAG 57.533 29.630 0.00 0.00 34.02 2.27
4973 5525 9.248291 GTGAGTGAATCAAGCATAAAAGAAAAA 57.752 29.630 0.00 0.00 40.43 1.94
4974 5526 8.632679 AGTGAGTGAATCAAGCATAAAAGAAAA 58.367 29.630 0.00 0.00 40.43 2.29
4975 5527 8.169977 AGTGAGTGAATCAAGCATAAAAGAAA 57.830 30.769 0.00 0.00 40.43 2.52
4976 5528 7.750229 AGTGAGTGAATCAAGCATAAAAGAA 57.250 32.000 0.00 0.00 40.43 2.52
4977 5529 7.750229 AAGTGAGTGAATCAAGCATAAAAGA 57.250 32.000 0.00 0.00 40.43 2.52
4978 5530 8.939929 TCTAAGTGAGTGAATCAAGCATAAAAG 58.060 33.333 0.00 0.00 40.43 2.27
4979 5531 8.846943 TCTAAGTGAGTGAATCAAGCATAAAA 57.153 30.769 0.00 0.00 40.43 1.52
4980 5532 8.886719 CATCTAAGTGAGTGAATCAAGCATAAA 58.113 33.333 0.00 0.00 40.43 1.40
4981 5533 8.043113 ACATCTAAGTGAGTGAATCAAGCATAA 58.957 33.333 0.00 0.00 40.43 1.90
4982 5534 7.493645 CACATCTAAGTGAGTGAATCAAGCATA 59.506 37.037 0.00 0.00 42.05 3.14
4983 5535 6.315642 CACATCTAAGTGAGTGAATCAAGCAT 59.684 38.462 0.00 0.00 42.05 3.79
4984 5536 5.640783 CACATCTAAGTGAGTGAATCAAGCA 59.359 40.000 0.00 0.00 42.05 3.91
4985 5537 5.447010 GCACATCTAAGTGAGTGAATCAAGC 60.447 44.000 0.00 0.00 42.05 4.01
4986 5538 5.640783 TGCACATCTAAGTGAGTGAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
4987 5539 5.550290 TGCACATCTAAGTGAGTGAATCAA 58.450 37.500 0.00 0.00 42.05 2.57
4988 5540 5.151297 TGCACATCTAAGTGAGTGAATCA 57.849 39.130 0.00 0.00 42.05 2.57
4989 5541 6.674694 ATTGCACATCTAAGTGAGTGAATC 57.325 37.500 0.00 0.00 42.05 2.52
4990 5542 7.826252 AGTTATTGCACATCTAAGTGAGTGAAT 59.174 33.333 0.00 0.00 42.05 2.57
4991 5543 7.161404 AGTTATTGCACATCTAAGTGAGTGAA 58.839 34.615 0.00 0.00 42.05 3.18
4992 5544 6.701340 AGTTATTGCACATCTAAGTGAGTGA 58.299 36.000 0.00 0.00 42.05 3.41
4993 5545 6.974932 AGTTATTGCACATCTAAGTGAGTG 57.025 37.500 0.00 0.00 42.05 3.51
4994 5546 8.067751 TCTAGTTATTGCACATCTAAGTGAGT 57.932 34.615 0.00 0.00 42.05 3.41
4995 5547 7.168972 GCTCTAGTTATTGCACATCTAAGTGAG 59.831 40.741 0.00 0.00 42.05 3.51
4996 5548 6.980978 GCTCTAGTTATTGCACATCTAAGTGA 59.019 38.462 0.00 0.00 42.05 3.41
4997 5549 6.758416 TGCTCTAGTTATTGCACATCTAAGTG 59.242 38.462 0.00 0.00 42.37 3.16
4998 5550 6.878317 TGCTCTAGTTATTGCACATCTAAGT 58.122 36.000 0.00 0.00 0.00 2.24
5023 5575 3.638627 TGTGTCTAGGGCACATCTAGATG 59.361 47.826 27.63 27.63 43.25 2.90
5024 5576 3.639094 GTGTGTCTAGGGCACATCTAGAT 59.361 47.826 18.92 0.00 46.66 1.98
5025 5577 3.024547 GTGTGTCTAGGGCACATCTAGA 58.975 50.000 18.92 0.00 46.66 2.43
5026 5578 2.101582 GGTGTGTCTAGGGCACATCTAG 59.898 54.545 18.92 0.00 46.66 2.43
5027 5579 2.108168 GGTGTGTCTAGGGCACATCTA 58.892 52.381 18.92 0.21 46.66 1.98
5028 5580 0.905357 GGTGTGTCTAGGGCACATCT 59.095 55.000 18.92 0.00 46.66 2.90
5029 5581 0.905357 AGGTGTGTCTAGGGCACATC 59.095 55.000 18.92 18.43 46.66 3.06
5030 5582 1.362224 AAGGTGTGTCTAGGGCACAT 58.638 50.000 18.92 8.37 46.66 3.21
5031 5583 2.018355 TAAGGTGTGTCTAGGGCACA 57.982 50.000 14.22 14.22 43.60 4.57
5032 5584 3.197983 AGAATAAGGTGTGTCTAGGGCAC 59.802 47.826 10.20 10.20 37.37 5.01
5033 5585 3.450904 AGAATAAGGTGTGTCTAGGGCA 58.549 45.455 0.00 0.00 0.00 5.36
5034 5586 5.609533 TTAGAATAAGGTGTGTCTAGGGC 57.390 43.478 0.00 0.00 0.00 5.19
5065 5617 3.728845 CCAAGATGGTTACTGGATACGG 58.271 50.000 0.00 0.00 40.28 4.02
5102 5654 1.070134 TGCTAGACAACAGAAAGCCGT 59.930 47.619 0.00 0.00 32.14 5.68
5129 5681 2.676748 ACCAAACAGCCCTGAAATTCA 58.323 42.857 1.69 0.00 0.00 2.57
5148 5700 0.603065 GGCAAAGTGTGGATGGGAAC 59.397 55.000 0.00 0.00 0.00 3.62
5149 5701 0.187117 TGGCAAAGTGTGGATGGGAA 59.813 50.000 0.00 0.00 0.00 3.97
5150 5702 0.539438 GTGGCAAAGTGTGGATGGGA 60.539 55.000 0.00 0.00 0.00 4.37
5151 5703 0.827089 TGTGGCAAAGTGTGGATGGG 60.827 55.000 0.00 0.00 0.00 4.00
5152 5704 0.314935 GTGTGGCAAAGTGTGGATGG 59.685 55.000 0.00 0.00 0.00 3.51
5153 5705 1.321474 AGTGTGGCAAAGTGTGGATG 58.679 50.000 0.00 0.00 0.00 3.51
5154 5706 2.071778 AAGTGTGGCAAAGTGTGGAT 57.928 45.000 0.00 0.00 0.00 3.41
5155 5707 2.685897 GTTAAGTGTGGCAAAGTGTGGA 59.314 45.455 0.00 0.00 0.00 4.02
5156 5708 2.223711 GGTTAAGTGTGGCAAAGTGTGG 60.224 50.000 0.00 0.00 0.00 4.17
5157 5709 2.687935 AGGTTAAGTGTGGCAAAGTGTG 59.312 45.455 0.00 0.00 0.00 3.82
5158 5710 3.012934 AGGTTAAGTGTGGCAAAGTGT 57.987 42.857 0.00 0.00 0.00 3.55
5159 5711 4.819630 TCTAAGGTTAAGTGTGGCAAAGTG 59.180 41.667 0.00 0.00 0.00 3.16
5160 5712 4.820173 GTCTAAGGTTAAGTGTGGCAAAGT 59.180 41.667 0.00 0.00 0.00 2.66
5161 5713 4.819630 TGTCTAAGGTTAAGTGTGGCAAAG 59.180 41.667 0.00 0.00 0.00 2.77
5162 5714 4.783055 TGTCTAAGGTTAAGTGTGGCAAA 58.217 39.130 0.00 0.00 0.00 3.68
5163 5715 4.425180 TGTCTAAGGTTAAGTGTGGCAA 57.575 40.909 0.00 0.00 0.00 4.52
5164 5716 4.141574 ACTTGTCTAAGGTTAAGTGTGGCA 60.142 41.667 0.00 0.00 38.26 4.92
5165 5717 4.386711 ACTTGTCTAAGGTTAAGTGTGGC 58.613 43.478 0.00 0.00 38.26 5.01
5166 5718 6.540914 TCAAACTTGTCTAAGGTTAAGTGTGG 59.459 38.462 0.00 0.00 41.80 4.17
5167 5719 7.407337 GTCAAACTTGTCTAAGGTTAAGTGTG 58.593 38.462 0.00 0.00 41.80 3.82
5168 5720 6.541278 GGTCAAACTTGTCTAAGGTTAAGTGT 59.459 38.462 0.00 0.00 41.80 3.55
5169 5721 6.540914 TGGTCAAACTTGTCTAAGGTTAAGTG 59.459 38.462 0.00 0.00 41.80 3.16
5170 5722 6.655930 TGGTCAAACTTGTCTAAGGTTAAGT 58.344 36.000 0.00 0.00 41.80 2.24
5171 5723 7.282450 ACTTGGTCAAACTTGTCTAAGGTTAAG 59.718 37.037 14.00 0.00 41.80 1.85
5172 5724 7.114095 ACTTGGTCAAACTTGTCTAAGGTTAA 58.886 34.615 14.00 0.00 41.80 2.01
5173 5725 6.655930 ACTTGGTCAAACTTGTCTAAGGTTA 58.344 36.000 14.00 0.00 41.80 2.85
5174 5726 5.506708 ACTTGGTCAAACTTGTCTAAGGTT 58.493 37.500 14.00 0.00 44.49 3.50
5175 5727 5.112129 ACTTGGTCAAACTTGTCTAAGGT 57.888 39.130 14.00 0.00 38.43 3.50
5176 5728 6.204882 CCTAACTTGGTCAAACTTGTCTAAGG 59.795 42.308 14.00 0.00 38.43 2.69
5177 5729 6.766467 ACCTAACTTGGTCAAACTTGTCTAAG 59.234 38.462 9.90 9.90 39.39 2.18
5178 5730 6.655930 ACCTAACTTGGTCAAACTTGTCTAA 58.344 36.000 0.00 0.00 34.86 2.10
5179 5731 6.243216 ACCTAACTTGGTCAAACTTGTCTA 57.757 37.500 0.00 0.00 34.86 2.59
5180 5732 5.112129 ACCTAACTTGGTCAAACTTGTCT 57.888 39.130 0.00 0.00 34.86 3.41
5181 5733 5.469084 CCTACCTAACTTGGTCAAACTTGTC 59.531 44.000 0.00 0.00 41.22 3.18
5182 5734 5.104235 ACCTACCTAACTTGGTCAAACTTGT 60.104 40.000 0.00 0.00 41.22 3.16
5183 5735 5.238650 CACCTACCTAACTTGGTCAAACTTG 59.761 44.000 0.00 0.00 41.22 3.16
5184 5736 5.104235 ACACCTACCTAACTTGGTCAAACTT 60.104 40.000 0.00 0.00 41.22 2.66
5185 5737 4.411212 ACACCTACCTAACTTGGTCAAACT 59.589 41.667 0.00 0.00 41.22 2.66
5186 5738 4.711399 ACACCTACCTAACTTGGTCAAAC 58.289 43.478 0.00 0.00 41.22 2.93
5187 5739 5.376756 AACACCTACCTAACTTGGTCAAA 57.623 39.130 0.00 0.00 41.22 2.69
5188 5740 5.127491 CAAACACCTACCTAACTTGGTCAA 58.873 41.667 0.00 0.00 41.22 3.18
5189 5741 4.445162 CCAAACACCTACCTAACTTGGTCA 60.445 45.833 0.00 0.00 41.22 4.02
5190 5742 4.070009 CCAAACACCTACCTAACTTGGTC 58.930 47.826 0.00 0.00 41.22 4.02
5191 5743 3.460712 ACCAAACACCTACCTAACTTGGT 59.539 43.478 0.00 0.00 40.09 3.67
5192 5744 4.094830 ACCAAACACCTACCTAACTTGG 57.905 45.455 0.00 0.00 38.23 3.61
5193 5745 5.374071 AGAACCAAACACCTACCTAACTTG 58.626 41.667 0.00 0.00 0.00 3.16
5194 5746 5.641789 AGAACCAAACACCTACCTAACTT 57.358 39.130 0.00 0.00 0.00 2.66
5195 5747 5.279859 GCTAGAACCAAACACCTACCTAACT 60.280 44.000 0.00 0.00 0.00 2.24
5196 5748 4.934001 GCTAGAACCAAACACCTACCTAAC 59.066 45.833 0.00 0.00 0.00 2.34
5197 5749 4.019950 GGCTAGAACCAAACACCTACCTAA 60.020 45.833 0.00 0.00 0.00 2.69
5198 5750 3.516700 GGCTAGAACCAAACACCTACCTA 59.483 47.826 0.00 0.00 0.00 3.08
5199 5751 2.305052 GGCTAGAACCAAACACCTACCT 59.695 50.000 0.00 0.00 0.00 3.08
5200 5752 2.039348 TGGCTAGAACCAAACACCTACC 59.961 50.000 0.00 0.00 36.55 3.18
5201 5753 3.072211 GTGGCTAGAACCAAACACCTAC 58.928 50.000 0.00 0.00 42.70 3.18
5202 5754 2.706723 TGTGGCTAGAACCAAACACCTA 59.293 45.455 0.00 0.00 42.70 3.08
5203 5755 1.493022 TGTGGCTAGAACCAAACACCT 59.507 47.619 0.00 0.00 42.70 4.00
5204 5756 1.607148 GTGTGGCTAGAACCAAACACC 59.393 52.381 5.14 0.00 45.87 4.16
5207 5759 2.271944 AGGTGTGGCTAGAACCAAAC 57.728 50.000 0.00 0.00 45.86 2.93
5208 5760 3.244770 CCTTAGGTGTGGCTAGAACCAAA 60.245 47.826 0.00 0.00 42.70 3.28
5209 5761 2.304761 CCTTAGGTGTGGCTAGAACCAA 59.695 50.000 0.00 0.00 42.70 3.67
5210 5762 1.906574 CCTTAGGTGTGGCTAGAACCA 59.093 52.381 0.00 0.00 36.37 3.67
5211 5763 1.407025 GCCTTAGGTGTGGCTAGAACC 60.407 57.143 0.00 0.00 45.26 3.62
5212 5764 2.025589 GCCTTAGGTGTGGCTAGAAC 57.974 55.000 0.00 0.00 45.26 3.01
5219 5771 2.514458 AATCCTTGCCTTAGGTGTGG 57.486 50.000 0.00 0.00 36.63 4.17
5220 5772 4.871933 AAAAATCCTTGCCTTAGGTGTG 57.128 40.909 0.00 0.00 36.63 3.82
5240 5792 3.572255 GTGGGGTTCACTGCTCATAAAAA 59.428 43.478 0.00 0.00 42.86 1.94
5241 5793 3.153919 GTGGGGTTCACTGCTCATAAAA 58.846 45.455 0.00 0.00 42.86 1.52
5242 5794 2.107378 TGTGGGGTTCACTGCTCATAAA 59.893 45.455 0.00 0.00 46.20 1.40
5243 5795 1.702401 TGTGGGGTTCACTGCTCATAA 59.298 47.619 0.00 0.00 46.20 1.90
5244 5796 1.357137 TGTGGGGTTCACTGCTCATA 58.643 50.000 0.00 0.00 46.20 2.15
5245 5797 0.700564 ATGTGGGGTTCACTGCTCAT 59.299 50.000 0.00 0.00 46.20 2.90
5246 5798 0.250858 CATGTGGGGTTCACTGCTCA 60.251 55.000 0.00 0.00 46.20 4.26
5247 5799 0.250901 ACATGTGGGGTTCACTGCTC 60.251 55.000 0.00 0.00 46.20 4.26
5248 5800 0.250901 GACATGTGGGGTTCACTGCT 60.251 55.000 1.15 0.00 46.20 4.24
5249 5801 0.537143 TGACATGTGGGGTTCACTGC 60.537 55.000 1.15 0.00 46.20 4.40
5250 5802 2.205022 ATGACATGTGGGGTTCACTG 57.795 50.000 1.15 0.00 46.20 3.66
5251 5803 3.055094 GTCTATGACATGTGGGGTTCACT 60.055 47.826 1.15 0.00 38.57 3.41
5252 5804 3.270877 GTCTATGACATGTGGGGTTCAC 58.729 50.000 1.15 0.00 38.41 3.18
5253 5805 2.909662 TGTCTATGACATGTGGGGTTCA 59.090 45.455 1.15 0.00 37.67 3.18
5254 5806 3.270877 GTGTCTATGACATGTGGGGTTC 58.729 50.000 1.15 0.00 44.63 3.62
5255 5807 2.642311 TGTGTCTATGACATGTGGGGTT 59.358 45.455 1.15 0.00 44.63 4.11
5256 5808 2.265367 TGTGTCTATGACATGTGGGGT 58.735 47.619 1.15 0.00 44.63 4.95
5257 5809 3.348647 TTGTGTCTATGACATGTGGGG 57.651 47.619 1.15 0.00 44.63 4.96
5258 5810 5.241506 ACTTTTTGTGTCTATGACATGTGGG 59.758 40.000 1.15 0.00 44.63 4.61
5259 5811 6.144854 CACTTTTTGTGTCTATGACATGTGG 58.855 40.000 1.15 0.00 44.63 4.17
5273 5825 8.796649 AAGGGAATCTTGCCACACTTTTTGTG 62.797 42.308 3.19 0.00 43.76 3.33
5274 5826 3.181466 GGGAATCTTGCCACACTTTTTGT 60.181 43.478 0.00 0.00 39.97 2.83
5275 5827 3.070015 AGGGAATCTTGCCACACTTTTTG 59.930 43.478 3.19 0.00 41.75 2.44
5276 5828 3.308401 AGGGAATCTTGCCACACTTTTT 58.692 40.909 3.19 0.00 41.75 1.94
5277 5829 2.962859 AGGGAATCTTGCCACACTTTT 58.037 42.857 3.19 0.00 41.75 2.27
5278 5830 2.683211 AGGGAATCTTGCCACACTTT 57.317 45.000 3.19 0.00 41.75 2.66
5279 5831 2.683211 AAGGGAATCTTGCCACACTT 57.317 45.000 3.19 0.00 41.75 3.16
5280 5832 2.025887 CCTAAGGGAATCTTGCCACACT 60.026 50.000 3.19 0.00 41.75 3.55
5281 5833 2.369394 CCTAAGGGAATCTTGCCACAC 58.631 52.381 3.19 0.00 41.75 3.82
5282 5834 1.340991 GCCTAAGGGAATCTTGCCACA 60.341 52.381 3.19 0.00 41.75 4.17
5283 5835 1.340991 TGCCTAAGGGAATCTTGCCAC 60.341 52.381 3.19 0.00 41.75 5.01
5284 5836 0.998928 TGCCTAAGGGAATCTTGCCA 59.001 50.000 3.19 0.00 41.75 4.92
5285 5837 2.027385 CTTGCCTAAGGGAATCTTGCC 58.973 52.381 0.00 0.00 39.23 4.52
5286 5838 1.406898 GCTTGCCTAAGGGAATCTTGC 59.593 52.381 0.00 0.00 36.93 4.01
5287 5839 2.027385 GGCTTGCCTAAGGGAATCTTG 58.973 52.381 4.11 0.00 36.93 3.02
5288 5840 1.640670 TGGCTTGCCTAAGGGAATCTT 59.359 47.619 13.18 0.00 39.40 2.40
5289 5841 1.298953 TGGCTTGCCTAAGGGAATCT 58.701 50.000 13.18 0.00 31.43 2.40
5290 5842 2.143876 TTGGCTTGCCTAAGGGAATC 57.856 50.000 13.18 0.00 31.43 2.52
5291 5843 2.225369 ACTTTGGCTTGCCTAAGGGAAT 60.225 45.455 28.97 13.21 31.43 3.01
5292 5844 1.146982 ACTTTGGCTTGCCTAAGGGAA 59.853 47.619 28.97 7.95 34.40 3.97
5293 5845 0.777446 ACTTTGGCTTGCCTAAGGGA 59.223 50.000 28.97 2.46 34.40 4.20
5294 5846 0.890683 CACTTTGGCTTGCCTAAGGG 59.109 55.000 28.97 24.82 34.40 3.95
5295 5847 1.270550 CACACTTTGGCTTGCCTAAGG 59.729 52.381 28.97 22.12 34.40 2.69
5296 5848 1.270550 CCACACTTTGGCTTGCCTAAG 59.729 52.381 25.92 25.92 39.07 2.18
5297 5849 1.327303 CCACACTTTGGCTTGCCTAA 58.673 50.000 13.18 10.47 39.07 2.69
5298 5850 3.034924 CCACACTTTGGCTTGCCTA 57.965 52.632 13.18 2.12 39.07 3.93
5299 5851 3.860681 CCACACTTTGGCTTGCCT 58.139 55.556 13.18 0.00 39.07 4.75
5308 5860 4.099266 TGCTCAAATTGTTAGCCACACTTT 59.901 37.500 4.54 0.00 38.47 2.66
5309 5861 3.636300 TGCTCAAATTGTTAGCCACACTT 59.364 39.130 4.54 0.00 33.98 3.16
5310 5862 3.221771 TGCTCAAATTGTTAGCCACACT 58.778 40.909 4.54 0.00 33.98 3.55
5311 5863 3.641437 TGCTCAAATTGTTAGCCACAC 57.359 42.857 4.54 0.00 33.98 3.82
5312 5864 3.636300 AGTTGCTCAAATTGTTAGCCACA 59.364 39.130 11.51 0.00 35.09 4.17
5313 5865 4.229876 GAGTTGCTCAAATTGTTAGCCAC 58.770 43.478 4.54 4.08 35.33 5.01
5314 5866 3.888323 TGAGTTGCTCAAATTGTTAGCCA 59.112 39.130 4.54 0.00 37.57 4.75
5315 5867 4.503741 TGAGTTGCTCAAATTGTTAGCC 57.496 40.909 4.54 0.00 37.57 3.93
5325 5877 5.294306 CACTTGTCTTAGTTGAGTTGCTCAA 59.706 40.000 7.41 7.41 46.50 3.02
5326 5878 4.811024 CACTTGTCTTAGTTGAGTTGCTCA 59.189 41.667 0.00 0.00 38.87 4.26
5327 5879 4.811557 ACACTTGTCTTAGTTGAGTTGCTC 59.188 41.667 0.00 0.00 0.00 4.26
5328 5880 4.770795 ACACTTGTCTTAGTTGAGTTGCT 58.229 39.130 0.00 0.00 0.00 3.91
5329 5881 5.333416 GCTACACTTGTCTTAGTTGAGTTGC 60.333 44.000 0.00 0.00 0.00 4.17
5330 5882 5.753438 TGCTACACTTGTCTTAGTTGAGTTG 59.247 40.000 0.00 0.00 0.00 3.16
5331 5883 5.914033 TGCTACACTTGTCTTAGTTGAGTT 58.086 37.500 0.00 0.00 0.00 3.01
5332 5884 5.531122 TGCTACACTTGTCTTAGTTGAGT 57.469 39.130 0.00 0.00 0.00 3.41
5333 5885 6.844696 TTTGCTACACTTGTCTTAGTTGAG 57.155 37.500 0.00 0.00 0.00 3.02
5334 5886 7.618502 TTTTTGCTACACTTGTCTTAGTTGA 57.381 32.000 0.00 0.00 0.00 3.18
5355 5907 9.624373 TTTGCCATATATTGCCACATAATTTTT 57.376 25.926 6.34 0.00 0.00 1.94
5356 5908 9.275398 CTTTGCCATATATTGCCACATAATTTT 57.725 29.630 6.34 0.00 0.00 1.82
5357 5909 7.879160 CCTTTGCCATATATTGCCACATAATTT 59.121 33.333 6.34 0.00 0.00 1.82
5358 5910 7.016465 ACCTTTGCCATATATTGCCACATAATT 59.984 33.333 6.34 0.00 0.00 1.40
5359 5911 6.497954 ACCTTTGCCATATATTGCCACATAAT 59.502 34.615 6.34 0.00 0.00 1.28
5360 5912 5.837979 ACCTTTGCCATATATTGCCACATAA 59.162 36.000 6.34 0.00 0.00 1.90
5361 5913 5.392995 ACCTTTGCCATATATTGCCACATA 58.607 37.500 6.34 0.00 0.00 2.29
5362 5914 4.225573 ACCTTTGCCATATATTGCCACAT 58.774 39.130 6.34 0.00 0.00 3.21
5363 5915 3.641046 ACCTTTGCCATATATTGCCACA 58.359 40.909 6.34 0.00 0.00 4.17
5364 5916 4.827284 ACTACCTTTGCCATATATTGCCAC 59.173 41.667 6.34 0.00 0.00 5.01
5365 5917 5.060427 ACTACCTTTGCCATATATTGCCA 57.940 39.130 6.34 0.00 0.00 4.92
5366 5918 5.048713 GTGACTACCTTTGCCATATATTGCC 60.049 44.000 6.34 0.00 0.00 4.52
5367 5919 5.530915 TGTGACTACCTTTGCCATATATTGC 59.469 40.000 1.83 1.83 0.00 3.56
5368 5920 7.566760 TTGTGACTACCTTTGCCATATATTG 57.433 36.000 0.00 0.00 0.00 1.90
5369 5921 7.448469 GGATTGTGACTACCTTTGCCATATATT 59.552 37.037 0.00 0.00 0.00 1.28
5370 5922 6.942576 GGATTGTGACTACCTTTGCCATATAT 59.057 38.462 0.00 0.00 0.00 0.86
5371 5923 6.126623 TGGATTGTGACTACCTTTGCCATATA 60.127 38.462 0.00 0.00 0.00 0.86
5372 5924 5.133221 GGATTGTGACTACCTTTGCCATAT 58.867 41.667 0.00 0.00 0.00 1.78
5373 5925 4.018870 TGGATTGTGACTACCTTTGCCATA 60.019 41.667 0.00 0.00 0.00 2.74
5374 5926 3.245229 TGGATTGTGACTACCTTTGCCAT 60.245 43.478 0.00 0.00 0.00 4.40
5375 5927 2.107378 TGGATTGTGACTACCTTTGCCA 59.893 45.455 0.00 0.00 0.00 4.92
5376 5928 2.790433 TGGATTGTGACTACCTTTGCC 58.210 47.619 0.00 0.00 0.00 4.52
5377 5929 4.037446 TGTTTGGATTGTGACTACCTTTGC 59.963 41.667 0.00 0.00 0.00 3.68
5378 5930 5.766150 TGTTTGGATTGTGACTACCTTTG 57.234 39.130 0.00 0.00 0.00 2.77
5379 5931 5.068591 GGTTGTTTGGATTGTGACTACCTTT 59.931 40.000 0.00 0.00 35.80 3.11
5380 5932 4.583073 GGTTGTTTGGATTGTGACTACCTT 59.417 41.667 0.00 0.00 35.80 3.50
5381 5933 4.142038 GGTTGTTTGGATTGTGACTACCT 58.858 43.478 0.00 0.00 35.80 3.08
5382 5934 3.254903 GGGTTGTTTGGATTGTGACTACC 59.745 47.826 0.00 0.00 37.24 3.18
5383 5935 3.254903 GGGGTTGTTTGGATTGTGACTAC 59.745 47.826 0.00 0.00 0.00 2.73
5384 5936 3.139397 AGGGGTTGTTTGGATTGTGACTA 59.861 43.478 0.00 0.00 0.00 2.59
5385 5937 2.091333 AGGGGTTGTTTGGATTGTGACT 60.091 45.455 0.00 0.00 0.00 3.41
5386 5938 2.316108 AGGGGTTGTTTGGATTGTGAC 58.684 47.619 0.00 0.00 0.00 3.67
5387 5939 2.765689 AGGGGTTGTTTGGATTGTGA 57.234 45.000 0.00 0.00 0.00 3.58
5388 5940 2.697751 TGAAGGGGTTGTTTGGATTGTG 59.302 45.455 0.00 0.00 0.00 3.33
5389 5941 3.039252 TGAAGGGGTTGTTTGGATTGT 57.961 42.857 0.00 0.00 0.00 2.71
5390 5942 5.421693 TGATATGAAGGGGTTGTTTGGATTG 59.578 40.000 0.00 0.00 0.00 2.67
5391 5943 5.588845 TGATATGAAGGGGTTGTTTGGATT 58.411 37.500 0.00 0.00 0.00 3.01
5392 5944 5.205517 TGATATGAAGGGGTTGTTTGGAT 57.794 39.130 0.00 0.00 0.00 3.41
5393 5945 4.666412 TGATATGAAGGGGTTGTTTGGA 57.334 40.909 0.00 0.00 0.00 3.53
5394 5946 5.937975 ATTGATATGAAGGGGTTGTTTGG 57.062 39.130 0.00 0.00 0.00 3.28
5395 5947 8.531146 ACTTTATTGATATGAAGGGGTTGTTTG 58.469 33.333 0.00 0.00 33.02 2.93
5396 5948 8.664669 ACTTTATTGATATGAAGGGGTTGTTT 57.335 30.769 0.00 0.00 33.02 2.83
5397 5949 8.531146 CAACTTTATTGATATGAAGGGGTTGTT 58.469 33.333 0.00 0.00 33.02 2.83
5398 5950 7.893302 TCAACTTTATTGATATGAAGGGGTTGT 59.107 33.333 0.00 0.00 33.02 3.32
5399 5951 8.292444 TCAACTTTATTGATATGAAGGGGTTG 57.708 34.615 0.00 0.00 33.02 3.77
5400 5952 7.068716 GCTCAACTTTATTGATATGAAGGGGTT 59.931 37.037 0.00 0.00 33.02 4.11
5401 5953 6.547510 GCTCAACTTTATTGATATGAAGGGGT 59.452 38.462 0.00 0.00 33.02 4.95
5402 5954 6.774656 AGCTCAACTTTATTGATATGAAGGGG 59.225 38.462 0.00 0.00 33.02 4.79
5403 5955 7.284034 ACAGCTCAACTTTATTGATATGAAGGG 59.716 37.037 7.74 0.00 33.02 3.95
5404 5956 8.127327 CACAGCTCAACTTTATTGATATGAAGG 58.873 37.037 7.74 0.00 33.02 3.46
5405 5957 8.886719 TCACAGCTCAACTTTATTGATATGAAG 58.113 33.333 7.74 0.00 34.47 3.02
5406 5958 8.791327 TCACAGCTCAACTTTATTGATATGAA 57.209 30.769 7.74 0.00 0.00 2.57
5407 5959 8.791327 TTCACAGCTCAACTTTATTGATATGA 57.209 30.769 7.74 0.00 0.00 2.15
5412 5964 7.970061 GCATATTTCACAGCTCAACTTTATTGA 59.030 33.333 0.00 0.00 0.00 2.57
5413 5965 7.972277 AGCATATTTCACAGCTCAACTTTATTG 59.028 33.333 0.00 0.00 30.05 1.90
5414 5966 8.059798 AGCATATTTCACAGCTCAACTTTATT 57.940 30.769 0.00 0.00 30.05 1.40
5415 5967 7.636150 AGCATATTTCACAGCTCAACTTTAT 57.364 32.000 0.00 0.00 30.05 1.40
5416 5968 7.452880 AAGCATATTTCACAGCTCAACTTTA 57.547 32.000 0.00 0.00 36.07 1.85
5417 5969 5.972107 AGCATATTTCACAGCTCAACTTT 57.028 34.783 0.00 0.00 30.05 2.66
5418 5970 5.972107 AAGCATATTTCACAGCTCAACTT 57.028 34.783 0.00 0.00 36.07 2.66
5419 5971 5.972107 AAAGCATATTTCACAGCTCAACT 57.028 34.783 0.00 0.00 36.07 3.16
5420 5972 5.741040 GCTAAAGCATATTTCACAGCTCAAC 59.259 40.000 0.00 0.00 41.59 3.18
5421 5973 5.883661 GCTAAAGCATATTTCACAGCTCAA 58.116 37.500 0.00 0.00 41.59 3.02
5422 5974 5.490139 GCTAAAGCATATTTCACAGCTCA 57.510 39.130 0.00 0.00 41.59 4.26
5436 5988 0.901827 TGGAGGATCGTGCTAAAGCA 59.098 50.000 8.42 0.00 42.97 3.91
5437 5989 1.869767 CATGGAGGATCGTGCTAAAGC 59.130 52.381 8.42 0.00 37.56 3.51
5438 5990 3.185246 ACATGGAGGATCGTGCTAAAG 57.815 47.619 8.42 0.00 34.37 1.85
5439 5991 3.627395 AACATGGAGGATCGTGCTAAA 57.373 42.857 8.42 0.00 34.37 1.85
5440 5992 3.627395 AAACATGGAGGATCGTGCTAA 57.373 42.857 8.42 0.00 34.37 3.09
5441 5993 4.955811 ATAAACATGGAGGATCGTGCTA 57.044 40.909 8.42 0.00 34.37 3.49
5442 5994 3.845781 ATAAACATGGAGGATCGTGCT 57.154 42.857 8.42 0.00 34.37 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.