Multiple sequence alignment - TraesCS6A01G168700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G168700 chr6A 100.000 4386 0 0 1 4386 175657596 175653211 0.000000e+00 8100.0
1 TraesCS6A01G168700 chr6D 97.866 2905 54 4 757 3660 134292186 134289289 0.000000e+00 5014.0
2 TraesCS6A01G168700 chr6D 98.875 1244 14 0 2417 3660 134695713 134694470 0.000000e+00 2220.0
3 TraesCS6A01G168700 chr6D 98.269 982 16 1 1438 2419 134696773 134695793 0.000000e+00 1718.0
4 TraesCS6A01G168700 chr6D 98.127 694 9 2 3697 4386 134694470 134693777 0.000000e+00 1206.0
5 TraesCS6A01G168700 chr6D 96.237 691 9 2 3697 4386 134289289 134288615 0.000000e+00 1116.0
6 TraesCS6A01G168700 chr6D 96.137 673 25 1 810 1482 134697436 134696765 0.000000e+00 1098.0
7 TraesCS6A01G168700 chr6D 92.941 85 6 0 455 539 134700272 134700188 1.660000e-24 124.0
8 TraesCS6A01G168700 chr6D 91.765 85 7 0 455 539 134294986 134294902 7.710000e-23 119.0
9 TraesCS6A01G168700 chr6B 96.277 2498 77 8 793 3290 233042447 233039966 0.000000e+00 4084.0
10 TraesCS6A01G168700 chr6B 89.353 742 46 16 3606 4347 233039643 233038935 0.000000e+00 902.0
11 TraesCS6A01G168700 chr6B 90.792 543 45 4 3340 3878 233038931 233038390 0.000000e+00 721.0
12 TraesCS6A01G168700 chr6B 92.526 388 24 2 1 387 430867131 430866748 6.410000e-153 551.0
13 TraesCS6A01G168700 chr6B 93.091 275 16 3 3302 3576 233039916 233039645 2.460000e-107 399.0
14 TraesCS6A01G168700 chr6B 89.683 252 24 2 529 780 220693554 220693803 1.970000e-83 320.0
15 TraesCS6A01G168700 chr6B 91.034 145 11 2 4025 4169 233038393 233038251 1.240000e-45 195.0
16 TraesCS6A01G168700 chr2B 93.798 387 20 1 1 387 512300708 512301090 2.940000e-161 579.0
17 TraesCS6A01G168700 chr2B 93.350 391 21 2 1 391 754627364 754627749 1.370000e-159 573.0
18 TraesCS6A01G168700 chr2B 93.023 387 22 2 1 387 208618879 208618498 1.070000e-155 560.0
19 TraesCS6A01G168700 chr2B 92.765 387 24 1 1 387 5019596 5019214 1.380000e-154 556.0
20 TraesCS6A01G168700 chr2B 89.241 158 15 1 3871 4026 602996296 602996453 3.460000e-46 196.0
21 TraesCS6A01G168700 chr7B 93.095 391 22 2 1 391 533380167 533379782 6.370000e-158 568.0
22 TraesCS6A01G168700 chr7B 89.474 247 26 0 531 777 379713988 379713742 3.290000e-81 313.0
23 TraesCS6A01G168700 chr7B 88.672 256 25 3 526 779 265718372 265718625 4.260000e-80 309.0
24 TraesCS6A01G168700 chr1B 92.765 387 24 1 1 387 374311215 374311597 1.380000e-154 556.0
25 TraesCS6A01G168700 chr4A 92.248 387 26 1 1 387 714555890 714555508 2.980000e-151 545.0
26 TraesCS6A01G168700 chr2A 90.909 396 31 2 1 395 611167875 611168266 1.080000e-145 527.0
27 TraesCS6A01G168700 chr7D 90.164 244 24 0 531 774 220276595 220276838 7.080000e-83 318.0
28 TraesCS6A01G168700 chr1A 90.456 241 23 0 533 773 573219711 573219471 7.080000e-83 318.0
29 TraesCS6A01G168700 chr1A 86.228 167 19 4 3864 4028 555641269 555641105 1.250000e-40 178.0
30 TraesCS6A01G168700 chr1A 97.561 41 1 0 4346 4386 485560608 485560568 2.190000e-08 71.3
31 TraesCS6A01G168700 chr4D 88.506 261 25 5 527 786 321292455 321292711 1.180000e-80 311.0
32 TraesCS6A01G168700 chr4D 88.213 263 25 4 526 784 275505723 275505463 4.260000e-80 309.0
33 TraesCS6A01G168700 chr1D 88.015 267 25 5 526 788 409186149 409185886 4.260000e-80 309.0
34 TraesCS6A01G168700 chr1D 97.561 41 1 0 4346 4386 386122193 386122153 2.190000e-08 71.3
35 TraesCS6A01G168700 chr7A 88.627 255 26 3 526 779 190680365 190680617 1.530000e-79 307.0
36 TraesCS6A01G168700 chrUn 83.951 243 30 4 1312 1545 63548538 63548296 1.590000e-54 224.0
37 TraesCS6A01G168700 chr5B 88.199 161 17 2 3868 4026 288327649 288327809 1.610000e-44 191.0
38 TraesCS6A01G168700 chr5D 88.961 154 16 1 3874 4026 256749952 256749799 5.790000e-44 189.0
39 TraesCS6A01G168700 chr5A 88.462 156 17 1 3875 4029 337822989 337822834 2.080000e-43 187.0
40 TraesCS6A01G168700 chr3D 85.475 179 20 5 3857 4030 286532947 286532770 9.690000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G168700 chr6A 175653211 175657596 4385 True 8100.0 8100 100.000000 1 4386 1 chr6A.!!$R1 4385
1 TraesCS6A01G168700 chr6D 134288615 134294986 6371 True 2083.0 5014 95.289333 455 4386 3 chr6D.!!$R1 3931
2 TraesCS6A01G168700 chr6D 134693777 134700272 6495 True 1273.2 2220 96.869800 455 4386 5 chr6D.!!$R2 3931
3 TraesCS6A01G168700 chr6B 233038251 233042447 4196 True 1260.2 4084 92.109400 793 4347 5 chr6B.!!$R2 3554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
27 28 0.031449 GGCTACGGCAGAAGCTAGAG 59.969 60.000 0.00 0.0 41.70 2.43 F
69 70 0.031857 CGCAAATGAAGTTGGGTGCA 59.968 50.000 0.01 0.0 36.85 4.57 F
803 3307 0.033503 AAGGGGGTAAAATCCAGGCG 60.034 55.000 0.00 0.0 0.00 5.52 F
2241 4781 1.003839 GCACCATTGTCCTCGTCCA 60.004 57.895 0.00 0.0 0.00 4.02 F
2679 5301 1.134367 GAGCACTATGGCTGTGTCGTA 59.866 52.381 0.00 0.0 45.99 3.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1725 4265 2.341176 GTGTTGGCGACGTAGGGT 59.659 61.111 0.00 0.00 0.00 4.34 R
2109 4649 0.954452 CAGCACTTTCCTGGAACACC 59.046 55.000 9.04 0.00 0.00 4.16 R
2679 5301 1.542492 CAGCTCTGCCCAACAAATCT 58.458 50.000 0.00 0.00 0.00 2.40 R
3323 5983 2.348411 ATACCAAGATCAAAGCCCCG 57.652 50.000 0.00 0.00 0.00 5.73 R
3594 6254 4.021544 AGGCACACACTTCTTAAGAGAGAG 60.022 45.833 16.61 10.22 32.44 3.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.789075 GAAGACGCGGCTACGGCA 62.789 66.667 18.71 0.00 46.03 5.69
18 19 4.796231 AAGACGCGGCTACGGCAG 62.796 66.667 18.71 0.00 46.03 4.85
20 21 4.789075 GACGCGGCTACGGCAGAA 62.789 66.667 12.47 0.00 42.03 3.02
21 22 4.796231 ACGCGGCTACGGCAGAAG 62.796 66.667 12.47 0.00 41.36 2.85
23 24 4.821589 GCGGCTACGGCAGAAGCT 62.822 66.667 0.00 0.00 41.70 3.74
24 25 2.805546 CGGCTACGGCAGAAGCTA 59.194 61.111 0.00 0.00 41.70 3.32
25 26 1.299468 CGGCTACGGCAGAAGCTAG 60.299 63.158 0.00 0.00 41.70 3.42
26 27 1.725557 CGGCTACGGCAGAAGCTAGA 61.726 60.000 0.00 0.00 41.70 2.43
27 28 0.031449 GGCTACGGCAGAAGCTAGAG 59.969 60.000 0.00 0.00 41.70 2.43
28 29 0.031449 GCTACGGCAGAAGCTAGAGG 59.969 60.000 0.00 0.00 41.70 3.69
29 30 1.394618 CTACGGCAGAAGCTAGAGGT 58.605 55.000 0.00 0.00 41.70 3.85
30 31 2.573369 CTACGGCAGAAGCTAGAGGTA 58.427 52.381 0.00 0.00 41.70 3.08
31 32 2.074729 ACGGCAGAAGCTAGAGGTAT 57.925 50.000 0.00 0.00 41.70 2.73
32 33 1.683917 ACGGCAGAAGCTAGAGGTATG 59.316 52.381 0.00 0.00 41.70 2.39
33 34 1.604185 CGGCAGAAGCTAGAGGTATGC 60.604 57.143 0.00 9.28 41.70 3.14
34 35 1.604185 GGCAGAAGCTAGAGGTATGCG 60.604 57.143 0.00 0.00 41.70 4.73
35 36 1.338337 GCAGAAGCTAGAGGTATGCGA 59.662 52.381 0.00 0.00 37.91 5.10
36 37 2.029470 GCAGAAGCTAGAGGTATGCGAT 60.029 50.000 0.00 0.00 37.91 4.58
37 38 3.191581 GCAGAAGCTAGAGGTATGCGATA 59.808 47.826 0.00 0.00 37.91 2.92
38 39 4.142271 GCAGAAGCTAGAGGTATGCGATAT 60.142 45.833 0.00 0.00 37.91 1.63
39 40 5.339177 CAGAAGCTAGAGGTATGCGATATG 58.661 45.833 0.00 0.00 0.00 1.78
40 41 4.400884 AGAAGCTAGAGGTATGCGATATGG 59.599 45.833 0.00 0.00 0.00 2.74
41 42 3.027412 AGCTAGAGGTATGCGATATGGG 58.973 50.000 0.00 0.00 0.00 4.00
42 43 2.482142 GCTAGAGGTATGCGATATGGGC 60.482 54.545 0.00 0.00 0.00 5.36
43 44 1.944177 AGAGGTATGCGATATGGGCT 58.056 50.000 0.00 0.00 0.00 5.19
44 45 1.827969 AGAGGTATGCGATATGGGCTC 59.172 52.381 0.00 0.00 0.00 4.70
45 46 1.827969 GAGGTATGCGATATGGGCTCT 59.172 52.381 0.00 0.00 0.00 4.09
46 47 2.234908 GAGGTATGCGATATGGGCTCTT 59.765 50.000 0.00 0.00 0.00 2.85
47 48 3.441101 AGGTATGCGATATGGGCTCTTA 58.559 45.455 0.00 0.00 0.00 2.10
48 49 3.195825 AGGTATGCGATATGGGCTCTTAC 59.804 47.826 0.00 0.00 0.00 2.34
49 50 3.195825 GGTATGCGATATGGGCTCTTACT 59.804 47.826 0.00 0.00 0.00 2.24
50 51 3.601443 ATGCGATATGGGCTCTTACTC 57.399 47.619 0.00 0.00 0.00 2.59
51 52 1.269723 TGCGATATGGGCTCTTACTCG 59.730 52.381 0.00 0.00 0.00 4.18
52 53 1.983972 CGATATGGGCTCTTACTCGC 58.016 55.000 0.00 0.00 0.00 5.03
53 54 1.269723 CGATATGGGCTCTTACTCGCA 59.730 52.381 0.00 0.00 0.00 5.10
54 55 2.288213 CGATATGGGCTCTTACTCGCAA 60.288 50.000 0.00 0.00 0.00 4.85
55 56 3.728845 GATATGGGCTCTTACTCGCAAA 58.271 45.455 0.00 0.00 0.00 3.68
56 57 2.717639 ATGGGCTCTTACTCGCAAAT 57.282 45.000 0.00 0.00 0.00 2.32
57 58 1.737838 TGGGCTCTTACTCGCAAATG 58.262 50.000 0.00 0.00 0.00 2.32
58 59 1.277842 TGGGCTCTTACTCGCAAATGA 59.722 47.619 0.00 0.00 0.00 2.57
59 60 2.290008 TGGGCTCTTACTCGCAAATGAA 60.290 45.455 0.00 0.00 0.00 2.57
60 61 2.352960 GGGCTCTTACTCGCAAATGAAG 59.647 50.000 0.00 0.00 0.00 3.02
61 62 3.003480 GGCTCTTACTCGCAAATGAAGT 58.997 45.455 0.00 0.00 0.00 3.01
62 63 3.437049 GGCTCTTACTCGCAAATGAAGTT 59.563 43.478 0.00 0.00 0.00 2.66
63 64 4.398247 GCTCTTACTCGCAAATGAAGTTG 58.602 43.478 0.00 0.00 0.00 3.16
64 65 4.670221 GCTCTTACTCGCAAATGAAGTTGG 60.670 45.833 0.00 0.00 0.00 3.77
65 66 3.751175 TCTTACTCGCAAATGAAGTTGGG 59.249 43.478 1.60 1.60 41.48 4.12
66 67 1.981256 ACTCGCAAATGAAGTTGGGT 58.019 45.000 7.31 0.00 41.05 4.51
67 68 1.608590 ACTCGCAAATGAAGTTGGGTG 59.391 47.619 7.31 7.52 41.05 4.61
68 69 0.313672 TCGCAAATGAAGTTGGGTGC 59.686 50.000 7.31 0.00 41.05 5.01
69 70 0.031857 CGCAAATGAAGTTGGGTGCA 59.968 50.000 0.01 0.00 36.85 4.57
70 71 1.537776 CGCAAATGAAGTTGGGTGCAA 60.538 47.619 0.00 0.00 36.85 4.08
71 72 2.769893 GCAAATGAAGTTGGGTGCAAT 58.230 42.857 0.00 0.00 32.29 3.56
72 73 3.613671 CGCAAATGAAGTTGGGTGCAATA 60.614 43.478 0.00 0.00 36.85 1.90
73 74 4.314121 GCAAATGAAGTTGGGTGCAATAA 58.686 39.130 0.00 0.00 32.29 1.40
74 75 4.754114 GCAAATGAAGTTGGGTGCAATAAA 59.246 37.500 0.00 0.00 32.29 1.40
75 76 5.238214 GCAAATGAAGTTGGGTGCAATAAAA 59.762 36.000 0.00 0.00 32.29 1.52
76 77 6.072563 GCAAATGAAGTTGGGTGCAATAAAAT 60.073 34.615 0.00 0.00 32.29 1.82
77 78 7.521910 GCAAATGAAGTTGGGTGCAATAAAATT 60.522 33.333 0.00 0.00 32.29 1.82
78 79 8.351461 CAAATGAAGTTGGGTGCAATAAAATTT 58.649 29.630 0.00 0.00 0.00 1.82
79 80 6.857777 TGAAGTTGGGTGCAATAAAATTTG 57.142 33.333 0.00 0.00 0.00 2.32
88 89 4.722052 GCAATAAAATTTGCGTCGAGTC 57.278 40.909 0.00 0.00 42.22 3.36
89 90 3.542310 GCAATAAAATTTGCGTCGAGTCC 59.458 43.478 0.00 0.00 42.22 3.85
90 91 3.651562 ATAAAATTTGCGTCGAGTCCG 57.348 42.857 0.00 0.00 37.07 4.79
91 92 1.504359 AAAATTTGCGTCGAGTCCGA 58.496 45.000 0.00 0.00 43.35 4.55
97 98 2.557059 TGCGTCGAGTCCGATTGCAT 62.557 55.000 11.61 0.00 46.45 3.96
99 100 4.833811 TCGAGTCCGATTGCATGG 57.166 55.556 0.00 0.00 40.30 3.66
100 101 2.198183 TCGAGTCCGATTGCATGGA 58.802 52.632 0.00 0.00 40.30 3.41
101 102 0.103026 TCGAGTCCGATTGCATGGAG 59.897 55.000 3.29 0.00 40.30 3.86
102 103 0.877649 CGAGTCCGATTGCATGGAGG 60.878 60.000 3.29 0.00 38.22 4.30
103 104 0.179000 GAGTCCGATTGCATGGAGGT 59.821 55.000 3.29 0.00 34.21 3.85
104 105 0.179000 AGTCCGATTGCATGGAGGTC 59.821 55.000 3.29 0.00 34.21 3.85
105 106 1.143838 TCCGATTGCATGGAGGTCG 59.856 57.895 14.30 14.30 0.00 4.79
106 107 1.153369 CCGATTGCATGGAGGTCGT 60.153 57.895 17.95 0.00 0.00 4.34
107 108 0.744414 CCGATTGCATGGAGGTCGTT 60.744 55.000 17.95 0.00 0.00 3.85
108 109 0.374758 CGATTGCATGGAGGTCGTTG 59.625 55.000 13.41 0.00 0.00 4.10
109 110 1.737838 GATTGCATGGAGGTCGTTGA 58.262 50.000 0.00 0.00 0.00 3.18
110 111 2.083774 GATTGCATGGAGGTCGTTGAA 58.916 47.619 0.00 0.00 0.00 2.69
111 112 1.522668 TTGCATGGAGGTCGTTGAAG 58.477 50.000 0.00 0.00 0.00 3.02
112 113 0.396435 TGCATGGAGGTCGTTGAAGT 59.604 50.000 0.00 0.00 0.00 3.01
113 114 1.079503 GCATGGAGGTCGTTGAAGTC 58.920 55.000 0.00 0.00 0.00 3.01
114 115 1.608025 GCATGGAGGTCGTTGAAGTCA 60.608 52.381 0.00 0.00 0.00 3.41
115 116 2.936993 GCATGGAGGTCGTTGAAGTCAT 60.937 50.000 0.00 0.00 0.00 3.06
116 117 2.455674 TGGAGGTCGTTGAAGTCATG 57.544 50.000 0.00 0.00 0.00 3.07
117 118 1.079503 GGAGGTCGTTGAAGTCATGC 58.920 55.000 0.00 0.00 0.00 4.06
118 119 1.608025 GGAGGTCGTTGAAGTCATGCA 60.608 52.381 0.00 0.00 0.00 3.96
119 120 2.143122 GAGGTCGTTGAAGTCATGCAA 58.857 47.619 0.00 0.00 0.00 4.08
120 121 2.146342 AGGTCGTTGAAGTCATGCAAG 58.854 47.619 0.00 0.00 0.00 4.01
121 122 1.197721 GGTCGTTGAAGTCATGCAAGG 59.802 52.381 0.00 0.00 0.00 3.61
122 123 1.197721 GTCGTTGAAGTCATGCAAGGG 59.802 52.381 0.00 0.00 32.47 3.95
123 124 0.523072 CGTTGAAGTCATGCAAGGGG 59.477 55.000 0.00 0.00 0.00 4.79
124 125 0.890683 GTTGAAGTCATGCAAGGGGG 59.109 55.000 0.00 0.00 0.00 5.40
144 145 2.820261 GGGGGTAGTTCGCTAGGC 59.180 66.667 0.00 0.00 0.00 3.93
145 146 2.804912 GGGGGTAGTTCGCTAGGCC 61.805 68.421 0.00 0.00 0.00 5.19
146 147 1.761271 GGGGTAGTTCGCTAGGCCT 60.761 63.158 11.78 11.78 0.00 5.19
147 148 1.442148 GGGTAGTTCGCTAGGCCTG 59.558 63.158 17.99 6.68 0.00 4.85
148 149 1.442148 GGTAGTTCGCTAGGCCTGG 59.558 63.158 17.99 15.23 0.00 4.45
149 150 1.328430 GGTAGTTCGCTAGGCCTGGT 61.328 60.000 17.99 0.00 0.00 4.00
150 151 1.396653 GTAGTTCGCTAGGCCTGGTA 58.603 55.000 17.99 1.74 0.00 3.25
151 152 1.337387 GTAGTTCGCTAGGCCTGGTAG 59.663 57.143 17.99 11.52 0.00 3.18
152 153 1.227292 GTTCGCTAGGCCTGGTAGC 60.227 63.158 17.99 16.24 39.71 3.58
159 160 2.440247 GGCCTGGTAGCCGCAATT 60.440 61.111 0.00 0.00 44.57 2.32
160 161 2.052104 GGCCTGGTAGCCGCAATTT 61.052 57.895 0.00 0.00 44.57 1.82
161 162 0.750182 GGCCTGGTAGCCGCAATTTA 60.750 55.000 0.00 0.00 44.57 1.40
162 163 1.318576 GCCTGGTAGCCGCAATTTAT 58.681 50.000 0.00 0.00 0.00 1.40
163 164 1.001378 GCCTGGTAGCCGCAATTTATG 60.001 52.381 0.00 0.00 0.00 1.90
164 165 2.571212 CCTGGTAGCCGCAATTTATGA 58.429 47.619 0.00 0.00 0.00 2.15
165 166 2.948979 CCTGGTAGCCGCAATTTATGAA 59.051 45.455 0.00 0.00 0.00 2.57
166 167 3.569701 CCTGGTAGCCGCAATTTATGAAT 59.430 43.478 0.00 0.00 0.00 2.57
167 168 4.759693 CCTGGTAGCCGCAATTTATGAATA 59.240 41.667 0.00 0.00 0.00 1.75
168 169 5.240623 CCTGGTAGCCGCAATTTATGAATAA 59.759 40.000 0.00 0.00 0.00 1.40
169 170 6.071952 CCTGGTAGCCGCAATTTATGAATAAT 60.072 38.462 0.00 0.00 0.00 1.28
170 171 7.283625 TGGTAGCCGCAATTTATGAATAATT 57.716 32.000 0.00 0.00 0.00 1.40
171 172 7.721402 TGGTAGCCGCAATTTATGAATAATTT 58.279 30.769 0.00 0.00 0.00 1.82
172 173 8.200792 TGGTAGCCGCAATTTATGAATAATTTT 58.799 29.630 0.00 0.00 0.00 1.82
173 174 8.699749 GGTAGCCGCAATTTATGAATAATTTTC 58.300 33.333 0.00 0.00 0.00 2.29
174 175 9.463443 GTAGCCGCAATTTATGAATAATTTTCT 57.537 29.630 0.00 0.00 0.00 2.52
175 176 8.947055 AGCCGCAATTTATGAATAATTTTCTT 57.053 26.923 0.00 0.00 0.00 2.52
176 177 9.382275 AGCCGCAATTTATGAATAATTTTCTTT 57.618 25.926 0.00 0.00 0.00 2.52
177 178 9.986833 GCCGCAATTTATGAATAATTTTCTTTT 57.013 25.926 0.00 0.00 0.00 2.27
216 217 8.825667 TTATTTCTTTTATGTTTTCCCACTGC 57.174 30.769 0.00 0.00 0.00 4.40
217 218 4.864704 TCTTTTATGTTTTCCCACTGCC 57.135 40.909 0.00 0.00 0.00 4.85
218 219 3.576550 TCTTTTATGTTTTCCCACTGCCC 59.423 43.478 0.00 0.00 0.00 5.36
219 220 2.990740 TTATGTTTTCCCACTGCCCT 57.009 45.000 0.00 0.00 0.00 5.19
220 221 4.390129 TTTATGTTTTCCCACTGCCCTA 57.610 40.909 0.00 0.00 0.00 3.53
221 222 2.514458 ATGTTTTCCCACTGCCCTAG 57.486 50.000 0.00 0.00 0.00 3.02
222 223 0.404040 TGTTTTCCCACTGCCCTAGG 59.596 55.000 0.06 0.06 0.00 3.02
223 224 0.323451 GTTTTCCCACTGCCCTAGGG 60.323 60.000 24.89 24.89 44.22 3.53
225 226 2.368594 TCCCACTGCCCTAGGGAG 59.631 66.667 33.21 25.24 46.42 4.30
226 227 2.770048 CCCACTGCCCTAGGGAGG 60.770 72.222 33.21 23.90 45.71 4.30
227 228 3.483869 CCACTGCCCTAGGGAGGC 61.484 72.222 33.21 16.76 45.71 4.70
232 233 2.517919 GCCCTAGGGAGGCCAATG 59.482 66.667 33.21 1.27 45.16 2.82
233 234 2.517919 CCCTAGGGAGGCCAATGC 59.482 66.667 24.99 0.00 42.21 3.56
234 235 2.111878 CCTAGGGAGGCCAATGCG 59.888 66.667 5.01 0.00 38.85 4.73
235 236 2.111878 CTAGGGAGGCCAATGCGG 59.888 66.667 5.01 0.00 38.85 5.69
248 249 4.234019 TGCGGCGGCAGATTTATT 57.766 50.000 15.76 0.00 46.21 1.40
249 250 1.726865 TGCGGCGGCAGATTTATTG 59.273 52.632 15.76 0.00 46.21 1.90
250 251 1.008538 GCGGCGGCAGATTTATTGG 60.009 57.895 9.78 0.00 39.62 3.16
251 252 1.008538 CGGCGGCAGATTTATTGGC 60.009 57.895 10.53 0.00 37.72 4.52
252 253 1.447317 CGGCGGCAGATTTATTGGCT 61.447 55.000 10.53 0.00 38.82 4.75
253 254 1.604604 GGCGGCAGATTTATTGGCTA 58.395 50.000 3.07 0.00 38.82 3.93
254 255 1.537202 GGCGGCAGATTTATTGGCTAG 59.463 52.381 3.07 0.00 38.82 3.42
255 256 2.494059 GCGGCAGATTTATTGGCTAGA 58.506 47.619 0.00 0.00 38.82 2.43
256 257 2.878406 GCGGCAGATTTATTGGCTAGAA 59.122 45.455 0.00 0.00 38.82 2.10
257 258 3.315191 GCGGCAGATTTATTGGCTAGAAA 59.685 43.478 0.00 0.00 38.82 2.52
258 259 4.022849 GCGGCAGATTTATTGGCTAGAAAT 60.023 41.667 1.28 1.28 38.82 2.17
259 260 5.507985 GCGGCAGATTTATTGGCTAGAAATT 60.508 40.000 3.24 0.00 38.82 1.82
260 261 6.507023 CGGCAGATTTATTGGCTAGAAATTT 58.493 36.000 3.24 0.00 38.82 1.82
261 262 6.418819 CGGCAGATTTATTGGCTAGAAATTTG 59.581 38.462 12.70 12.70 38.82 2.32
262 263 6.703165 GGCAGATTTATTGGCTAGAAATTTGG 59.297 38.462 16.63 6.49 38.03 3.28
263 264 7.417797 GGCAGATTTATTGGCTAGAAATTTGGA 60.418 37.037 16.63 0.00 38.03 3.53
264 265 7.650903 GCAGATTTATTGGCTAGAAATTTGGAG 59.349 37.037 16.63 0.00 29.74 3.86
265 266 8.689972 CAGATTTATTGGCTAGAAATTTGGAGT 58.310 33.333 10.25 0.00 0.00 3.85
266 267 9.259832 AGATTTATTGGCTAGAAATTTGGAGTT 57.740 29.630 0.00 0.00 0.00 3.01
267 268 9.521503 GATTTATTGGCTAGAAATTTGGAGTTC 57.478 33.333 0.00 0.00 0.00 3.01
268 269 8.650143 TTTATTGGCTAGAAATTTGGAGTTCT 57.350 30.769 0.00 0.00 42.36 3.01
269 270 6.765915 ATTGGCTAGAAATTTGGAGTTCTC 57.234 37.500 0.00 0.00 39.27 2.87
270 271 5.505181 TGGCTAGAAATTTGGAGTTCTCT 57.495 39.130 0.00 0.00 39.27 3.10
271 272 5.491982 TGGCTAGAAATTTGGAGTTCTCTC 58.508 41.667 0.00 0.00 39.27 3.20
272 273 5.013079 TGGCTAGAAATTTGGAGTTCTCTCA 59.987 40.000 0.00 0.00 39.27 3.27
273 274 6.118852 GGCTAGAAATTTGGAGTTCTCTCAT 58.881 40.000 0.00 0.00 39.27 2.90
274 275 7.092891 TGGCTAGAAATTTGGAGTTCTCTCATA 60.093 37.037 0.00 0.00 39.27 2.15
275 276 7.225734 GGCTAGAAATTTGGAGTTCTCTCATAC 59.774 40.741 0.00 0.00 39.27 2.39
276 277 7.766278 GCTAGAAATTTGGAGTTCTCTCATACA 59.234 37.037 0.00 0.00 39.27 2.29
277 278 9.658799 CTAGAAATTTGGAGTTCTCTCATACAA 57.341 33.333 0.00 0.00 39.27 2.41
279 280 9.525826 AGAAATTTGGAGTTCTCTCATACAATT 57.474 29.630 0.00 0.00 35.43 2.32
280 281 9.565213 GAAATTTGGAGTTCTCTCATACAATTG 57.435 33.333 3.24 3.24 42.05 2.32
281 282 8.641498 AATTTGGAGTTCTCTCATACAATTGT 57.359 30.769 16.68 16.68 42.05 2.71
282 283 8.641498 ATTTGGAGTTCTCTCATACAATTGTT 57.359 30.769 17.78 1.87 42.05 2.83
283 284 8.463930 TTTGGAGTTCTCTCATACAATTGTTT 57.536 30.769 17.78 5.99 42.05 2.83
284 285 7.439157 TGGAGTTCTCTCATACAATTGTTTG 57.561 36.000 17.78 18.75 42.05 2.93
285 286 7.223584 TGGAGTTCTCTCATACAATTGTTTGA 58.776 34.615 24.34 24.34 42.05 2.69
286 287 7.719193 TGGAGTTCTCTCATACAATTGTTTGAA 59.281 33.333 25.37 17.39 42.05 2.69
287 288 8.567948 GGAGTTCTCTCATACAATTGTTTGAAA 58.432 33.333 25.37 16.09 42.05 2.69
288 289 9.950680 GAGTTCTCTCATACAATTGTTTGAAAA 57.049 29.630 25.37 18.47 40.18 2.29
295 296 9.801714 CTCATACAATTGTTTGAAAATCAAAGC 57.198 29.630 25.37 3.09 45.83 3.51
296 297 8.772705 TCATACAATTGTTTGAAAATCAAAGCC 58.227 29.630 23.95 0.00 45.83 4.35
297 298 8.776470 CATACAATTGTTTGAAAATCAAAGCCT 58.224 29.630 20.48 0.00 45.83 4.58
298 299 7.018635 ACAATTGTTTGAAAATCAAAGCCTG 57.981 32.000 4.92 4.79 45.83 4.85
299 300 5.678132 ATTGTTTGAAAATCAAAGCCTGC 57.322 34.783 5.81 0.00 45.83 4.85
300 301 4.134379 TGTTTGAAAATCAAAGCCTGCA 57.866 36.364 5.81 0.00 45.83 4.41
301 302 4.121317 TGTTTGAAAATCAAAGCCTGCAG 58.879 39.130 6.78 6.78 45.83 4.41
302 303 3.389925 TTGAAAATCAAAGCCTGCAGG 57.610 42.857 29.34 29.34 32.71 4.85
303 304 1.619827 TGAAAATCAAAGCCTGCAGGG 59.380 47.619 33.46 17.23 35.18 4.45
304 305 7.931084 GTTTGAAAATCAAAGCCTGCAGGGT 62.931 44.000 31.61 31.61 45.83 4.34
311 312 2.778899 AGCCTGCAGGGTTTCTAGT 58.221 52.632 31.61 0.00 44.81 2.57
312 313 1.952621 AGCCTGCAGGGTTTCTAGTA 58.047 50.000 31.61 0.00 44.81 1.82
313 314 1.834263 AGCCTGCAGGGTTTCTAGTAG 59.166 52.381 31.61 2.55 44.81 2.57
314 315 1.831736 GCCTGCAGGGTTTCTAGTAGA 59.168 52.381 33.46 0.00 37.43 2.59
315 316 2.436173 GCCTGCAGGGTTTCTAGTAGAT 59.564 50.000 33.46 0.00 37.43 1.98
316 317 3.742640 GCCTGCAGGGTTTCTAGTAGATG 60.743 52.174 33.46 2.94 37.43 2.90
317 318 3.452627 CCTGCAGGGTTTCTAGTAGATGT 59.547 47.826 26.14 0.00 0.00 3.06
318 319 4.649674 CCTGCAGGGTTTCTAGTAGATGTA 59.350 45.833 26.14 0.00 0.00 2.29
319 320 5.305644 CCTGCAGGGTTTCTAGTAGATGTAT 59.694 44.000 26.14 0.00 0.00 2.29
320 321 6.183361 CCTGCAGGGTTTCTAGTAGATGTATT 60.183 42.308 26.14 0.00 0.00 1.89
321 322 7.015292 CCTGCAGGGTTTCTAGTAGATGTATTA 59.985 40.741 26.14 0.00 0.00 0.98
322 323 8.313944 TGCAGGGTTTCTAGTAGATGTATTAA 57.686 34.615 0.00 0.00 0.00 1.40
323 324 8.202137 TGCAGGGTTTCTAGTAGATGTATTAAC 58.798 37.037 0.00 1.44 0.00 2.01
324 325 8.202137 GCAGGGTTTCTAGTAGATGTATTAACA 58.798 37.037 0.00 0.00 40.69 2.41
338 339 9.817809 AGATGTATTAACAAACGATGTATCACT 57.182 29.630 0.00 0.00 42.99 3.41
344 345 9.959749 ATTAACAAACGATGTATCACTTTTTGT 57.040 25.926 0.00 0.00 42.99 2.83
345 346 7.678194 AACAAACGATGTATCACTTTTTGTG 57.322 32.000 0.00 0.00 42.99 3.33
346 347 5.685511 ACAAACGATGTATCACTTTTTGTGC 59.314 36.000 0.00 0.00 42.69 4.57
347 348 5.431420 AACGATGTATCACTTTTTGTGCA 57.569 34.783 0.00 0.00 45.81 4.57
348 349 5.627499 ACGATGTATCACTTTTTGTGCAT 57.373 34.783 0.00 0.00 45.81 3.96
349 350 5.393124 ACGATGTATCACTTTTTGTGCATG 58.607 37.500 0.00 0.00 45.81 4.06
350 351 5.181056 ACGATGTATCACTTTTTGTGCATGA 59.819 36.000 0.00 0.00 45.81 3.07
351 352 6.085573 CGATGTATCACTTTTTGTGCATGAA 58.914 36.000 0.00 0.00 45.81 2.57
352 353 6.581919 CGATGTATCACTTTTTGTGCATGAAA 59.418 34.615 0.00 0.00 45.81 2.69
353 354 7.274033 CGATGTATCACTTTTTGTGCATGAAAT 59.726 33.333 0.00 0.00 45.81 2.17
354 355 9.571810 GATGTATCACTTTTTGTGCATGAAATA 57.428 29.630 0.00 0.00 45.81 1.40
360 361 9.202273 TCACTTTTTGTGCATGAAATATAAACC 57.798 29.630 0.00 0.00 45.81 3.27
361 362 8.161610 CACTTTTTGTGCATGAAATATAAACCG 58.838 33.333 0.00 0.00 40.06 4.44
362 363 6.639671 TTTTGTGCATGAAATATAAACCGC 57.360 33.333 0.00 0.00 0.00 5.68
363 364 4.300189 TGTGCATGAAATATAAACCGCC 57.700 40.909 0.00 0.00 0.00 6.13
364 365 3.696548 TGTGCATGAAATATAAACCGCCA 59.303 39.130 0.00 0.00 0.00 5.69
365 366 4.340666 TGTGCATGAAATATAAACCGCCAT 59.659 37.500 0.00 0.00 0.00 4.40
366 367 4.681025 GTGCATGAAATATAAACCGCCATG 59.319 41.667 0.00 0.00 34.66 3.66
367 368 4.582240 TGCATGAAATATAAACCGCCATGA 59.418 37.500 0.00 0.00 33.72 3.07
368 369 4.917415 GCATGAAATATAAACCGCCATGAC 59.083 41.667 0.00 0.00 33.72 3.06
369 370 4.804608 TGAAATATAAACCGCCATGACG 57.195 40.909 0.00 0.00 0.00 4.35
380 381 3.840831 CCATGACGGCTTTCTCTCA 57.159 52.632 0.00 0.00 0.00 3.27
381 382 2.099141 CCATGACGGCTTTCTCTCAA 57.901 50.000 0.00 0.00 0.00 3.02
382 383 2.426522 CCATGACGGCTTTCTCTCAAA 58.573 47.619 0.00 0.00 0.00 2.69
383 384 2.813754 CCATGACGGCTTTCTCTCAAAA 59.186 45.455 0.00 0.00 0.00 2.44
384 385 3.253188 CCATGACGGCTTTCTCTCAAAAA 59.747 43.478 0.00 0.00 0.00 1.94
412 413 4.590850 AAAGAAACAAATCAGCAGGTCC 57.409 40.909 0.00 0.00 0.00 4.46
413 414 2.154462 AGAAACAAATCAGCAGGTCCG 58.846 47.619 0.00 0.00 0.00 4.79
414 415 1.880027 GAAACAAATCAGCAGGTCCGT 59.120 47.619 0.00 0.00 0.00 4.69
415 416 2.851263 AACAAATCAGCAGGTCCGTA 57.149 45.000 0.00 0.00 0.00 4.02
416 417 2.851263 ACAAATCAGCAGGTCCGTAA 57.149 45.000 0.00 0.00 0.00 3.18
417 418 3.134574 ACAAATCAGCAGGTCCGTAAA 57.865 42.857 0.00 0.00 0.00 2.01
418 419 3.482436 ACAAATCAGCAGGTCCGTAAAA 58.518 40.909 0.00 0.00 0.00 1.52
419 420 4.079253 ACAAATCAGCAGGTCCGTAAAAT 58.921 39.130 0.00 0.00 0.00 1.82
420 421 4.156008 ACAAATCAGCAGGTCCGTAAAATC 59.844 41.667 0.00 0.00 0.00 2.17
421 422 2.396590 TCAGCAGGTCCGTAAAATCC 57.603 50.000 0.00 0.00 0.00 3.01
422 423 1.065709 TCAGCAGGTCCGTAAAATCCC 60.066 52.381 0.00 0.00 0.00 3.85
423 424 0.107848 AGCAGGTCCGTAAAATCCCG 60.108 55.000 0.00 0.00 0.00 5.14
424 425 0.392060 GCAGGTCCGTAAAATCCCGT 60.392 55.000 0.00 0.00 0.00 5.28
425 426 1.947212 GCAGGTCCGTAAAATCCCGTT 60.947 52.381 0.00 0.00 0.00 4.44
426 427 1.735571 CAGGTCCGTAAAATCCCGTTG 59.264 52.381 0.00 0.00 0.00 4.10
427 428 0.448990 GGTCCGTAAAATCCCGTTGC 59.551 55.000 0.00 0.00 0.00 4.17
428 429 1.445871 GTCCGTAAAATCCCGTTGCT 58.554 50.000 0.00 0.00 0.00 3.91
429 430 1.808343 GTCCGTAAAATCCCGTTGCTT 59.192 47.619 0.00 0.00 0.00 3.91
430 431 2.227149 GTCCGTAAAATCCCGTTGCTTT 59.773 45.455 0.00 0.00 0.00 3.51
431 432 3.436359 GTCCGTAAAATCCCGTTGCTTTA 59.564 43.478 0.00 0.00 0.00 1.85
432 433 3.685756 TCCGTAAAATCCCGTTGCTTTAG 59.314 43.478 0.00 0.00 0.00 1.85
433 434 3.437741 CCGTAAAATCCCGTTGCTTTAGT 59.562 43.478 0.00 0.00 0.00 2.24
434 435 4.399978 CGTAAAATCCCGTTGCTTTAGTG 58.600 43.478 0.00 0.00 0.00 2.74
435 436 3.297830 AAAATCCCGTTGCTTTAGTGC 57.702 42.857 0.00 0.00 0.00 4.40
436 437 0.802494 AATCCCGTTGCTTTAGTGCG 59.198 50.000 0.00 0.00 35.36 5.34
437 438 0.321298 ATCCCGTTGCTTTAGTGCGT 60.321 50.000 0.00 0.00 35.36 5.24
438 439 1.206578 CCCGTTGCTTTAGTGCGTG 59.793 57.895 0.00 0.00 35.36 5.34
439 440 1.503818 CCCGTTGCTTTAGTGCGTGT 61.504 55.000 0.00 0.00 35.36 4.49
440 441 1.141645 CCGTTGCTTTAGTGCGTGTA 58.858 50.000 0.00 0.00 35.36 2.90
441 442 1.730064 CCGTTGCTTTAGTGCGTGTAT 59.270 47.619 0.00 0.00 35.36 2.29
442 443 2.222729 CCGTTGCTTTAGTGCGTGTATC 60.223 50.000 0.00 0.00 35.36 2.24
443 444 2.666508 CGTTGCTTTAGTGCGTGTATCT 59.333 45.455 0.00 0.00 35.36 1.98
444 445 3.855379 CGTTGCTTTAGTGCGTGTATCTA 59.145 43.478 0.00 0.00 35.36 1.98
445 446 4.027621 CGTTGCTTTAGTGCGTGTATCTAG 60.028 45.833 0.00 0.00 35.36 2.43
446 447 3.444916 TGCTTTAGTGCGTGTATCTAGC 58.555 45.455 0.00 0.00 35.36 3.42
447 448 3.119280 TGCTTTAGTGCGTGTATCTAGCA 60.119 43.478 0.00 0.00 38.71 3.49
448 449 4.051922 GCTTTAGTGCGTGTATCTAGCAT 58.948 43.478 0.00 0.00 43.17 3.79
449 450 4.508124 GCTTTAGTGCGTGTATCTAGCATT 59.492 41.667 0.00 0.00 43.17 3.56
450 451 5.006746 GCTTTAGTGCGTGTATCTAGCATTT 59.993 40.000 0.00 0.00 43.17 2.32
451 452 6.456988 GCTTTAGTGCGTGTATCTAGCATTTT 60.457 38.462 0.00 0.00 43.17 1.82
452 453 6.978343 TTAGTGCGTGTATCTAGCATTTTT 57.022 33.333 0.00 0.00 43.17 1.94
453 454 5.221891 AGTGCGTGTATCTAGCATTTTTG 57.778 39.130 0.00 0.00 43.17 2.44
509 510 0.744874 CTCGGGAAGCCAGAATCGTA 59.255 55.000 0.00 0.00 0.00 3.43
570 571 5.892160 AAACAGAGTTGATGATGATGGTG 57.108 39.130 0.00 0.00 0.00 4.17
576 577 2.314323 TGATGATGATGGTGTGTCCG 57.686 50.000 0.00 0.00 39.52 4.79
577 578 1.554617 TGATGATGATGGTGTGTCCGT 59.445 47.619 0.00 0.00 39.52 4.69
584 585 1.860641 ATGGTGTGTCCGTCATCCTA 58.139 50.000 0.00 0.00 39.52 2.94
586 587 3.021177 TGGTGTGTCCGTCATCCTATA 57.979 47.619 0.00 0.00 39.52 1.31
587 588 3.367321 TGGTGTGTCCGTCATCCTATAA 58.633 45.455 0.00 0.00 39.52 0.98
589 590 4.202212 TGGTGTGTCCGTCATCCTATAATG 60.202 45.833 0.00 0.00 39.52 1.90
590 591 4.202223 GGTGTGTCCGTCATCCTATAATGT 60.202 45.833 0.00 0.00 0.00 2.71
591 592 5.010314 GGTGTGTCCGTCATCCTATAATGTA 59.990 44.000 0.00 0.00 0.00 2.29
593 594 5.243060 TGTGTCCGTCATCCTATAATGTAGG 59.757 44.000 0.00 0.00 36.06 3.18
594 595 4.219944 TGTCCGTCATCCTATAATGTAGGC 59.780 45.833 0.00 0.00 34.74 3.93
595 596 3.767673 TCCGTCATCCTATAATGTAGGCC 59.232 47.826 0.00 0.00 34.74 5.19
599 1858 3.767673 TCATCCTATAATGTAGGCCGTCC 59.232 47.826 0.00 0.00 34.74 4.79
609 1868 4.445452 TGTAGGCCGTCCGATTTATATC 57.555 45.455 0.00 0.00 37.47 1.63
610 1869 4.084287 TGTAGGCCGTCCGATTTATATCT 58.916 43.478 0.00 0.00 37.47 1.98
611 1870 3.594603 AGGCCGTCCGATTTATATCTG 57.405 47.619 0.00 0.00 37.47 2.90
612 1871 3.162666 AGGCCGTCCGATTTATATCTGA 58.837 45.455 0.00 0.00 37.47 3.27
613 1872 3.056749 AGGCCGTCCGATTTATATCTGAC 60.057 47.826 0.00 7.39 39.96 3.51
621 1880 7.933215 TCCGATTTATATCTGACGGATAGAA 57.067 36.000 9.78 8.46 43.30 2.10
622 1881 8.344446 TCCGATTTATATCTGACGGATAGAAA 57.656 34.615 20.78 20.78 45.83 2.52
625 1884 8.459635 CGATTTATATCTGACGGATAGAAAGGA 58.540 37.037 22.18 6.98 45.34 3.36
628 1887 9.760077 TTTATATCTGACGGATAGAAAGGAAAC 57.240 33.333 16.58 0.00 40.79 2.78
629 1888 5.941555 ATCTGACGGATAGAAAGGAAACT 57.058 39.130 0.00 0.00 35.69 2.66
631 1890 7.604657 ATCTGACGGATAGAAAGGAAACTAT 57.395 36.000 0.00 0.00 33.70 2.12
632 1891 6.806751 TCTGACGGATAGAAAGGAAACTATG 58.193 40.000 0.00 0.00 42.68 2.23
633 1892 5.914033 TGACGGATAGAAAGGAAACTATGG 58.086 41.667 0.00 0.00 42.68 2.74
634 1893 4.704965 ACGGATAGAAAGGAAACTATGGC 58.295 43.478 0.00 0.00 42.68 4.40
635 1894 4.163458 ACGGATAGAAAGGAAACTATGGCA 59.837 41.667 0.00 0.00 42.68 4.92
636 1895 5.123227 CGGATAGAAAGGAAACTATGGCAA 58.877 41.667 0.00 0.00 42.68 4.52
637 1896 5.765182 CGGATAGAAAGGAAACTATGGCAAT 59.235 40.000 0.00 0.00 42.68 3.56
639 1898 7.201821 CGGATAGAAAGGAAACTATGGCAATTT 60.202 37.037 0.00 0.00 42.68 1.82
656 1915 9.830975 ATGGCAATTTTATAAAAGAATACCCAC 57.169 29.630 15.45 1.56 0.00 4.61
657 1916 8.816894 TGGCAATTTTATAAAAGAATACCCACA 58.183 29.630 15.45 3.68 0.00 4.17
662 1921 8.943594 TTTTATAAAAGAATACCCACACACCT 57.056 30.769 6.54 0.00 0.00 4.00
663 1922 8.570068 TTTATAAAAGAATACCCACACACCTC 57.430 34.615 0.00 0.00 0.00 3.85
664 1923 4.724279 AAAAGAATACCCACACACCTCT 57.276 40.909 0.00 0.00 0.00 3.69
665 1924 4.724279 AAAGAATACCCACACACCTCTT 57.276 40.909 0.00 0.00 0.00 2.85
668 1927 3.008049 AGAATACCCACACACCTCTTCAC 59.992 47.826 0.00 0.00 0.00 3.18
669 1928 1.796017 TACCCACACACCTCTTCACA 58.204 50.000 0.00 0.00 0.00 3.58
670 1929 1.140312 ACCCACACACCTCTTCACAT 58.860 50.000 0.00 0.00 0.00 3.21
671 1930 1.494721 ACCCACACACCTCTTCACATT 59.505 47.619 0.00 0.00 0.00 2.71
673 1932 2.294233 CCCACACACCTCTTCACATTTG 59.706 50.000 0.00 0.00 0.00 2.32
674 1933 2.287788 CCACACACCTCTTCACATTTGC 60.288 50.000 0.00 0.00 0.00 3.68
675 1934 2.358582 CACACACCTCTTCACATTTGCA 59.641 45.455 0.00 0.00 0.00 4.08
676 1935 3.023119 ACACACCTCTTCACATTTGCAA 58.977 40.909 0.00 0.00 0.00 4.08
677 1936 3.446873 ACACACCTCTTCACATTTGCAAA 59.553 39.130 15.44 15.44 0.00 3.68
678 1937 4.099881 ACACACCTCTTCACATTTGCAAAT 59.900 37.500 18.99 18.99 0.00 2.32
679 1938 5.301551 ACACACCTCTTCACATTTGCAAATA 59.698 36.000 23.69 6.69 0.00 1.40
680 1939 6.183360 ACACACCTCTTCACATTTGCAAATAA 60.183 34.615 23.69 13.90 0.00 1.40
683 1942 6.583806 CACCTCTTCACATTTGCAAATAAGAC 59.416 38.462 23.69 0.00 0.00 3.01
686 2472 7.869429 CCTCTTCACATTTGCAAATAAGACTTT 59.131 33.333 23.69 0.00 0.00 2.66
687 2473 8.801715 TCTTCACATTTGCAAATAAGACTTTC 57.198 30.769 23.69 0.00 0.00 2.62
692 2478 9.474920 CACATTTGCAAATAAGACTTTCCTTTA 57.525 29.630 23.69 0.00 0.00 1.85
744 2530 9.618890 ACTACTCATACAAATGCATCTTAATGT 57.381 29.630 0.00 3.63 35.18 2.71
747 2533 9.793252 ACTCATACAAATGCATCTTAATGTTTC 57.207 29.630 0.00 0.00 35.18 2.78
748 2534 8.839947 TCATACAAATGCATCTTAATGTTTCG 57.160 30.769 0.00 0.00 35.18 3.46
754 3257 5.058149 TGCATCTTAATGTTTCGTGCAAT 57.942 34.783 0.00 0.00 38.07 3.56
774 3278 0.179084 GCACGGGCATCTTGCTAGTA 60.179 55.000 3.77 0.00 44.28 1.82
778 3282 3.255888 CACGGGCATCTTGCTAGTATAGA 59.744 47.826 0.00 0.00 42.77 1.98
780 3284 3.759086 CGGGCATCTTGCTAGTATAGAGA 59.241 47.826 0.00 0.00 42.77 3.10
803 3307 0.033503 AAGGGGGTAAAATCCAGGCG 60.034 55.000 0.00 0.00 0.00 5.52
1078 3582 3.523806 GAAGCTGCTCCTCTTCGTT 57.476 52.632 1.00 0.00 30.79 3.85
1168 3672 4.704103 TCCAGTCGGGCAGGCTCT 62.704 66.667 0.00 0.00 36.21 4.09
2037 4577 1.600916 ACAAAGAGGGTTCGCCAGC 60.601 57.895 0.00 0.00 39.65 4.85
2241 4781 1.003839 GCACCATTGTCCTCGTCCA 60.004 57.895 0.00 0.00 0.00 4.02
2316 4856 3.050275 GCTGGTCGCCAACTCCAC 61.050 66.667 0.35 0.00 30.80 4.02
2679 5301 1.134367 GAGCACTATGGCTGTGTCGTA 59.866 52.381 0.00 0.00 45.99 3.43
2757 5379 2.292845 GGCAGCTAATGAAAGAGATGGC 59.707 50.000 0.00 0.00 45.54 4.40
3342 6002 1.133792 CCGGGGCTTTGATCTTGGTAT 60.134 52.381 0.00 0.00 0.00 2.73
3576 6236 4.267536 CTTGGACCAGACAATGATGTGAT 58.732 43.478 0.00 0.00 40.74 3.06
3594 6254 4.222588 TGTGATGGGGGATTGATGTTTTTC 59.777 41.667 0.00 0.00 0.00 2.29
3687 6347 3.322828 AGCATTCTTTCCAGCAACATTGT 59.677 39.130 0.00 0.00 0.00 2.71
3688 6348 4.060205 GCATTCTTTCCAGCAACATTGTT 58.940 39.130 0.00 0.00 0.00 2.83
4108 6771 9.784531 ACCACAAATATGATAGAAACAGGATAG 57.215 33.333 0.00 0.00 0.00 2.08
4148 6811 7.249147 TCTAAGTTCGAGCTAACAACATCTAC 58.751 38.462 0.90 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.789075 TGCCGTAGCCGCGTCTTC 62.789 66.667 4.92 0.00 38.69 2.87
1 2 4.796231 CTGCCGTAGCCGCGTCTT 62.796 66.667 4.92 0.00 38.69 3.01
3 4 4.789075 TTCTGCCGTAGCCGCGTC 62.789 66.667 4.92 0.00 38.69 5.19
4 5 4.796231 CTTCTGCCGTAGCCGCGT 62.796 66.667 4.92 0.00 38.69 6.01
6 7 3.426117 TAGCTTCTGCCGTAGCCGC 62.426 63.158 3.17 0.00 40.80 6.53
7 8 1.299468 CTAGCTTCTGCCGTAGCCG 60.299 63.158 3.17 0.00 40.80 5.52
8 9 0.031449 CTCTAGCTTCTGCCGTAGCC 59.969 60.000 3.17 0.00 40.80 3.93
9 10 0.031449 CCTCTAGCTTCTGCCGTAGC 59.969 60.000 0.00 0.00 40.80 3.58
10 11 1.394618 ACCTCTAGCTTCTGCCGTAG 58.605 55.000 0.00 0.00 40.80 3.51
11 12 2.723322 TACCTCTAGCTTCTGCCGTA 57.277 50.000 0.00 0.00 40.80 4.02
12 13 1.683917 CATACCTCTAGCTTCTGCCGT 59.316 52.381 0.00 0.00 40.80 5.68
13 14 1.604185 GCATACCTCTAGCTTCTGCCG 60.604 57.143 0.00 0.00 40.80 5.69
14 15 1.604185 CGCATACCTCTAGCTTCTGCC 60.604 57.143 0.00 0.00 40.80 4.85
15 16 1.338337 TCGCATACCTCTAGCTTCTGC 59.662 52.381 0.00 0.00 40.05 4.26
16 17 3.932545 ATCGCATACCTCTAGCTTCTG 57.067 47.619 0.00 0.00 0.00 3.02
17 18 4.400884 CCATATCGCATACCTCTAGCTTCT 59.599 45.833 0.00 0.00 0.00 2.85
18 19 4.440802 CCCATATCGCATACCTCTAGCTTC 60.441 50.000 0.00 0.00 0.00 3.86
19 20 3.449018 CCCATATCGCATACCTCTAGCTT 59.551 47.826 0.00 0.00 0.00 3.74
20 21 3.027412 CCCATATCGCATACCTCTAGCT 58.973 50.000 0.00 0.00 0.00 3.32
21 22 2.482142 GCCCATATCGCATACCTCTAGC 60.482 54.545 0.00 0.00 0.00 3.42
22 23 3.027412 AGCCCATATCGCATACCTCTAG 58.973 50.000 0.00 0.00 0.00 2.43
23 24 3.024547 GAGCCCATATCGCATACCTCTA 58.975 50.000 0.00 0.00 0.00 2.43
24 25 1.827969 GAGCCCATATCGCATACCTCT 59.172 52.381 0.00 0.00 0.00 3.69
25 26 1.827969 AGAGCCCATATCGCATACCTC 59.172 52.381 0.00 0.00 0.00 3.85
26 27 1.944177 AGAGCCCATATCGCATACCT 58.056 50.000 0.00 0.00 0.00 3.08
27 28 2.770164 AAGAGCCCATATCGCATACC 57.230 50.000 0.00 0.00 0.00 2.73
28 29 4.425520 GAGTAAGAGCCCATATCGCATAC 58.574 47.826 0.00 0.00 0.00 2.39
29 30 3.128764 CGAGTAAGAGCCCATATCGCATA 59.871 47.826 0.00 0.00 0.00 3.14
30 31 2.094494 CGAGTAAGAGCCCATATCGCAT 60.094 50.000 0.00 0.00 0.00 4.73
31 32 1.269723 CGAGTAAGAGCCCATATCGCA 59.730 52.381 0.00 0.00 0.00 5.10
32 33 1.983972 CGAGTAAGAGCCCATATCGC 58.016 55.000 0.00 0.00 0.00 4.58
33 34 1.269723 TGCGAGTAAGAGCCCATATCG 59.730 52.381 0.00 0.00 0.00 2.92
34 35 3.386768 TTGCGAGTAAGAGCCCATATC 57.613 47.619 0.00 0.00 0.00 1.63
35 36 3.838244 TTTGCGAGTAAGAGCCCATAT 57.162 42.857 0.00 0.00 0.00 1.78
36 37 3.133901 TCATTTGCGAGTAAGAGCCCATA 59.866 43.478 0.00 0.00 0.00 2.74
37 38 2.092968 TCATTTGCGAGTAAGAGCCCAT 60.093 45.455 0.00 0.00 0.00 4.00
38 39 1.277842 TCATTTGCGAGTAAGAGCCCA 59.722 47.619 0.00 0.00 0.00 5.36
39 40 2.024176 TCATTTGCGAGTAAGAGCCC 57.976 50.000 0.00 0.00 0.00 5.19
40 41 3.003480 ACTTCATTTGCGAGTAAGAGCC 58.997 45.455 0.00 0.00 0.00 4.70
41 42 4.398247 CAACTTCATTTGCGAGTAAGAGC 58.602 43.478 0.00 0.00 0.00 4.09
42 43 4.142816 CCCAACTTCATTTGCGAGTAAGAG 60.143 45.833 0.00 0.00 0.00 2.85
43 44 3.751175 CCCAACTTCATTTGCGAGTAAGA 59.249 43.478 0.00 0.00 0.00 2.10
44 45 3.502211 ACCCAACTTCATTTGCGAGTAAG 59.498 43.478 0.00 0.00 0.00 2.34
45 46 3.252215 CACCCAACTTCATTTGCGAGTAA 59.748 43.478 0.00 0.00 0.00 2.24
46 47 2.811431 CACCCAACTTCATTTGCGAGTA 59.189 45.455 0.00 0.00 0.00 2.59
47 48 1.608590 CACCCAACTTCATTTGCGAGT 59.391 47.619 0.00 0.00 0.00 4.18
48 49 1.666888 GCACCCAACTTCATTTGCGAG 60.667 52.381 0.00 0.00 0.00 5.03
49 50 0.313672 GCACCCAACTTCATTTGCGA 59.686 50.000 0.00 0.00 0.00 5.10
50 51 0.031857 TGCACCCAACTTCATTTGCG 59.968 50.000 0.00 0.00 32.49 4.85
51 52 2.237393 TTGCACCCAACTTCATTTGC 57.763 45.000 0.00 0.00 0.00 3.68
52 53 6.857777 TTTTATTGCACCCAACTTCATTTG 57.142 33.333 0.00 0.00 32.95 2.32
53 54 8.351461 CAAATTTTATTGCACCCAACTTCATTT 58.649 29.630 0.00 0.00 32.95 2.32
54 55 7.873910 CAAATTTTATTGCACCCAACTTCATT 58.126 30.769 0.00 0.00 32.95 2.57
55 56 7.437793 CAAATTTTATTGCACCCAACTTCAT 57.562 32.000 0.00 0.00 32.95 2.57
56 57 6.857777 CAAATTTTATTGCACCCAACTTCA 57.142 33.333 0.00 0.00 32.95 3.02
67 68 5.751815 CGGACTCGACGCAAATTTTATTGC 61.752 45.833 2.05 2.05 44.35 3.56
68 69 3.778718 CGGACTCGACGCAAATTTTATTG 59.221 43.478 0.00 0.00 39.00 1.90
69 70 3.680937 TCGGACTCGACGCAAATTTTATT 59.319 39.130 0.00 0.00 40.88 1.40
70 71 3.255725 TCGGACTCGACGCAAATTTTAT 58.744 40.909 0.00 0.00 40.88 1.40
71 72 2.674954 TCGGACTCGACGCAAATTTTA 58.325 42.857 0.00 0.00 40.88 1.52
72 73 1.504359 TCGGACTCGACGCAAATTTT 58.496 45.000 0.00 0.00 40.88 1.82
73 74 3.204505 TCGGACTCGACGCAAATTT 57.795 47.368 0.00 0.00 40.88 1.82
74 75 4.979204 TCGGACTCGACGCAAATT 57.021 50.000 0.00 0.00 40.88 1.82
83 84 0.877649 CCTCCATGCAATCGGACTCG 60.878 60.000 0.00 0.00 37.82 4.18
84 85 0.179000 ACCTCCATGCAATCGGACTC 59.821 55.000 0.00 0.00 0.00 3.36
85 86 0.179000 GACCTCCATGCAATCGGACT 59.821 55.000 0.00 0.00 0.00 3.85
86 87 1.154205 CGACCTCCATGCAATCGGAC 61.154 60.000 0.00 0.00 0.00 4.79
87 88 1.143838 CGACCTCCATGCAATCGGA 59.856 57.895 0.00 0.00 0.00 4.55
88 89 0.744414 AACGACCTCCATGCAATCGG 60.744 55.000 0.00 0.00 37.11 4.18
89 90 0.374758 CAACGACCTCCATGCAATCG 59.625 55.000 0.00 0.00 38.71 3.34
90 91 1.737838 TCAACGACCTCCATGCAATC 58.262 50.000 0.00 0.00 0.00 2.67
91 92 2.086869 CTTCAACGACCTCCATGCAAT 58.913 47.619 0.00 0.00 0.00 3.56
92 93 1.202758 ACTTCAACGACCTCCATGCAA 60.203 47.619 0.00 0.00 0.00 4.08
93 94 0.396435 ACTTCAACGACCTCCATGCA 59.604 50.000 0.00 0.00 0.00 3.96
94 95 1.079503 GACTTCAACGACCTCCATGC 58.920 55.000 0.00 0.00 0.00 4.06
95 96 2.455674 TGACTTCAACGACCTCCATG 57.544 50.000 0.00 0.00 0.00 3.66
96 97 2.936993 GCATGACTTCAACGACCTCCAT 60.937 50.000 0.00 0.00 0.00 3.41
97 98 1.608025 GCATGACTTCAACGACCTCCA 60.608 52.381 0.00 0.00 0.00 3.86
98 99 1.079503 GCATGACTTCAACGACCTCC 58.920 55.000 0.00 0.00 0.00 4.30
99 100 1.795768 TGCATGACTTCAACGACCTC 58.204 50.000 0.00 0.00 0.00 3.85
100 101 2.146342 CTTGCATGACTTCAACGACCT 58.854 47.619 0.00 0.00 0.00 3.85
101 102 1.197721 CCTTGCATGACTTCAACGACC 59.802 52.381 0.00 0.00 0.00 4.79
102 103 1.197721 CCCTTGCATGACTTCAACGAC 59.802 52.381 0.00 0.00 0.00 4.34
103 104 1.522668 CCCTTGCATGACTTCAACGA 58.477 50.000 0.00 0.00 0.00 3.85
104 105 0.523072 CCCCTTGCATGACTTCAACG 59.477 55.000 0.00 0.00 0.00 4.10
105 106 0.890683 CCCCCTTGCATGACTTCAAC 59.109 55.000 0.00 0.00 0.00 3.18
106 107 3.362040 CCCCCTTGCATGACTTCAA 57.638 52.632 0.00 0.00 0.00 2.69
127 128 2.804912 GGCCTAGCGAACTACCCCC 61.805 68.421 0.00 0.00 0.00 5.40
128 129 1.761271 AGGCCTAGCGAACTACCCC 60.761 63.158 1.29 0.00 0.00 4.95
129 130 1.442148 CAGGCCTAGCGAACTACCC 59.558 63.158 3.98 0.00 0.00 3.69
130 131 1.328430 ACCAGGCCTAGCGAACTACC 61.328 60.000 3.98 0.00 0.00 3.18
131 132 1.337387 CTACCAGGCCTAGCGAACTAC 59.663 57.143 3.98 0.00 0.00 2.73
132 133 1.688772 CTACCAGGCCTAGCGAACTA 58.311 55.000 3.98 0.00 0.00 2.24
133 134 1.677637 GCTACCAGGCCTAGCGAACT 61.678 60.000 3.98 0.00 0.00 3.01
134 135 1.227292 GCTACCAGGCCTAGCGAAC 60.227 63.158 3.98 0.00 0.00 3.95
135 136 3.217231 GCTACCAGGCCTAGCGAA 58.783 61.111 3.98 0.00 0.00 4.70
143 144 1.001378 CATAAATTGCGGCTACCAGGC 60.001 52.381 0.00 0.00 37.44 4.85
144 145 2.571212 TCATAAATTGCGGCTACCAGG 58.429 47.619 0.00 0.00 0.00 4.45
145 146 4.836125 ATTCATAAATTGCGGCTACCAG 57.164 40.909 0.00 0.00 0.00 4.00
146 147 6.892658 ATTATTCATAAATTGCGGCTACCA 57.107 33.333 0.00 0.00 0.00 3.25
147 148 8.587952 AAAATTATTCATAAATTGCGGCTACC 57.412 30.769 0.00 0.00 0.00 3.18
148 149 9.463443 AGAAAATTATTCATAAATTGCGGCTAC 57.537 29.630 0.00 0.00 0.00 3.58
150 151 8.947055 AAGAAAATTATTCATAAATTGCGGCT 57.053 26.923 0.00 0.00 0.00 5.52
151 152 9.986833 AAAAGAAAATTATTCATAAATTGCGGC 57.013 25.926 0.00 0.00 0.00 6.53
190 191 9.267084 GCAGTGGGAAAACATAAAAGAAATAAA 57.733 29.630 0.00 0.00 0.00 1.40
191 192 7.875554 GGCAGTGGGAAAACATAAAAGAAATAA 59.124 33.333 0.00 0.00 0.00 1.40
192 193 7.382898 GGCAGTGGGAAAACATAAAAGAAATA 58.617 34.615 0.00 0.00 0.00 1.40
193 194 6.230472 GGCAGTGGGAAAACATAAAAGAAAT 58.770 36.000 0.00 0.00 0.00 2.17
194 195 5.454045 GGGCAGTGGGAAAACATAAAAGAAA 60.454 40.000 0.00 0.00 0.00 2.52
195 196 4.039852 GGGCAGTGGGAAAACATAAAAGAA 59.960 41.667 0.00 0.00 0.00 2.52
196 197 3.576550 GGGCAGTGGGAAAACATAAAAGA 59.423 43.478 0.00 0.00 0.00 2.52
197 198 3.578282 AGGGCAGTGGGAAAACATAAAAG 59.422 43.478 0.00 0.00 0.00 2.27
198 199 3.582164 AGGGCAGTGGGAAAACATAAAA 58.418 40.909 0.00 0.00 0.00 1.52
199 200 3.252554 AGGGCAGTGGGAAAACATAAA 57.747 42.857 0.00 0.00 0.00 1.40
200 201 2.990740 AGGGCAGTGGGAAAACATAA 57.009 45.000 0.00 0.00 0.00 1.90
201 202 2.241176 CCTAGGGCAGTGGGAAAACATA 59.759 50.000 0.00 0.00 0.00 2.29
202 203 1.005924 CCTAGGGCAGTGGGAAAACAT 59.994 52.381 0.00 0.00 0.00 2.71
203 204 0.404040 CCTAGGGCAGTGGGAAAACA 59.596 55.000 0.00 0.00 0.00 2.83
204 205 0.323451 CCCTAGGGCAGTGGGAAAAC 60.323 60.000 16.90 0.00 43.47 2.43
205 206 0.476808 TCCCTAGGGCAGTGGGAAAA 60.477 55.000 24.42 0.00 46.06 2.29
206 207 1.162329 TCCCTAGGGCAGTGGGAAA 59.838 57.895 24.42 0.00 46.06 3.13
207 208 2.874216 TCCCTAGGGCAGTGGGAA 59.126 61.111 24.42 0.00 46.06 3.97
208 209 2.368594 CTCCCTAGGGCAGTGGGA 59.631 66.667 24.42 2.89 46.78 4.37
209 210 2.770048 CCTCCCTAGGGCAGTGGG 60.770 72.222 24.42 14.75 39.48 4.61
216 217 2.517919 GCATTGGCCTCCCTAGGG 59.482 66.667 23.22 23.22 43.87 3.53
217 218 2.111878 CGCATTGGCCTCCCTAGG 59.888 66.667 3.32 0.06 46.76 3.02
218 219 2.111878 CCGCATTGGCCTCCCTAG 59.888 66.667 3.32 0.00 36.38 3.02
227 228 1.723608 TAAATCTGCCGCCGCATTGG 61.724 55.000 0.00 0.00 46.11 3.16
228 229 0.311790 ATAAATCTGCCGCCGCATTG 59.688 50.000 0.00 0.00 46.11 2.82
229 230 1.032014 AATAAATCTGCCGCCGCATT 58.968 45.000 0.00 0.00 46.11 3.56
230 231 0.311790 CAATAAATCTGCCGCCGCAT 59.688 50.000 0.00 0.00 46.11 4.73
231 232 1.723608 CCAATAAATCTGCCGCCGCA 61.724 55.000 0.00 0.00 44.78 5.69
232 233 1.008538 CCAATAAATCTGCCGCCGC 60.009 57.895 0.00 0.00 0.00 6.53
233 234 1.008538 GCCAATAAATCTGCCGCCG 60.009 57.895 0.00 0.00 0.00 6.46
234 235 1.537202 CTAGCCAATAAATCTGCCGCC 59.463 52.381 0.00 0.00 0.00 6.13
235 236 2.494059 TCTAGCCAATAAATCTGCCGC 58.506 47.619 0.00 0.00 0.00 6.53
236 237 5.695851 ATTTCTAGCCAATAAATCTGCCG 57.304 39.130 0.00 0.00 0.00 5.69
237 238 6.703165 CCAAATTTCTAGCCAATAAATCTGCC 59.297 38.462 0.00 0.00 0.00 4.85
238 239 7.491682 TCCAAATTTCTAGCCAATAAATCTGC 58.508 34.615 0.00 0.00 0.00 4.26
239 240 8.689972 ACTCCAAATTTCTAGCCAATAAATCTG 58.310 33.333 0.00 0.00 0.00 2.90
240 241 8.829373 ACTCCAAATTTCTAGCCAATAAATCT 57.171 30.769 0.00 0.00 0.00 2.40
241 242 9.521503 GAACTCCAAATTTCTAGCCAATAAATC 57.478 33.333 0.00 0.00 0.00 2.17
242 243 9.259832 AGAACTCCAAATTTCTAGCCAATAAAT 57.740 29.630 0.00 0.00 30.01 1.40
243 244 8.650143 AGAACTCCAAATTTCTAGCCAATAAA 57.350 30.769 0.00 0.00 30.01 1.40
244 245 8.109634 AGAGAACTCCAAATTTCTAGCCAATAA 58.890 33.333 0.00 0.00 32.04 1.40
245 246 7.633789 AGAGAACTCCAAATTTCTAGCCAATA 58.366 34.615 0.00 0.00 32.04 1.90
246 247 6.488715 AGAGAACTCCAAATTTCTAGCCAAT 58.511 36.000 0.00 0.00 32.04 3.16
247 248 5.880901 AGAGAACTCCAAATTTCTAGCCAA 58.119 37.500 0.00 0.00 32.04 4.52
248 249 5.013079 TGAGAGAACTCCAAATTTCTAGCCA 59.987 40.000 0.00 0.00 41.99 4.75
249 250 5.491982 TGAGAGAACTCCAAATTTCTAGCC 58.508 41.667 0.00 0.00 41.99 3.93
250 251 7.766278 TGTATGAGAGAACTCCAAATTTCTAGC 59.234 37.037 0.00 0.00 41.99 3.42
251 252 9.658799 TTGTATGAGAGAACTCCAAATTTCTAG 57.341 33.333 0.00 0.00 41.99 2.43
253 254 9.525826 AATTGTATGAGAGAACTCCAAATTTCT 57.474 29.630 0.00 0.00 41.99 2.52
254 255 9.565213 CAATTGTATGAGAGAACTCCAAATTTC 57.435 33.333 0.00 0.00 41.99 2.17
255 256 9.082313 ACAATTGTATGAGAGAACTCCAAATTT 57.918 29.630 9.97 0.00 41.99 1.82
256 257 8.641498 ACAATTGTATGAGAGAACTCCAAATT 57.359 30.769 9.97 0.00 41.99 1.82
257 258 8.641498 AACAATTGTATGAGAGAACTCCAAAT 57.359 30.769 12.39 0.00 41.99 2.32
258 259 8.352201 CAAACAATTGTATGAGAGAACTCCAAA 58.648 33.333 12.39 0.00 41.99 3.28
259 260 7.719193 TCAAACAATTGTATGAGAGAACTCCAA 59.281 33.333 12.39 0.00 38.69 3.53
260 261 7.223584 TCAAACAATTGTATGAGAGAACTCCA 58.776 34.615 12.39 0.00 38.69 3.86
261 262 7.672983 TCAAACAATTGTATGAGAGAACTCC 57.327 36.000 12.39 0.00 38.69 3.85
262 263 9.950680 TTTTCAAACAATTGTATGAGAGAACTC 57.049 29.630 12.39 0.00 39.24 3.01
269 270 9.801714 GCTTTGATTTTCAAACAATTGTATGAG 57.198 29.630 12.39 2.50 41.02 2.90
270 271 8.772705 GGCTTTGATTTTCAAACAATTGTATGA 58.227 29.630 12.39 0.00 41.02 2.15
271 272 8.776470 AGGCTTTGATTTTCAAACAATTGTATG 58.224 29.630 12.39 0.00 41.02 2.39
272 273 8.776470 CAGGCTTTGATTTTCAAACAATTGTAT 58.224 29.630 12.39 0.00 41.02 2.29
273 274 7.254727 GCAGGCTTTGATTTTCAAACAATTGTA 60.255 33.333 12.39 0.00 41.02 2.41
274 275 6.458615 GCAGGCTTTGATTTTCAAACAATTGT 60.459 34.615 4.92 4.92 41.02 2.71
275 276 5.910723 GCAGGCTTTGATTTTCAAACAATTG 59.089 36.000 3.24 3.24 41.02 2.32
276 277 5.589452 TGCAGGCTTTGATTTTCAAACAATT 59.411 32.000 0.00 0.00 41.02 2.32
277 278 5.124645 TGCAGGCTTTGATTTTCAAACAAT 58.875 33.333 0.00 0.00 41.02 2.71
278 279 4.511527 TGCAGGCTTTGATTTTCAAACAA 58.488 34.783 0.00 0.00 41.02 2.83
279 280 4.121317 CTGCAGGCTTTGATTTTCAAACA 58.879 39.130 5.57 0.00 41.02 2.83
280 281 3.495753 CCTGCAGGCTTTGATTTTCAAAC 59.504 43.478 22.33 0.00 41.02 2.93
281 282 3.494749 CCCTGCAGGCTTTGATTTTCAAA 60.495 43.478 28.39 2.96 43.37 2.69
282 283 2.037511 CCCTGCAGGCTTTGATTTTCAA 59.962 45.455 28.39 0.00 34.03 2.69
283 284 1.619827 CCCTGCAGGCTTTGATTTTCA 59.380 47.619 28.39 0.00 0.00 2.69
284 285 1.620323 ACCCTGCAGGCTTTGATTTTC 59.380 47.619 28.39 0.00 40.58 2.29
285 286 1.720781 ACCCTGCAGGCTTTGATTTT 58.279 45.000 28.39 0.00 40.58 1.82
286 287 1.720781 AACCCTGCAGGCTTTGATTT 58.279 45.000 28.39 7.66 40.58 2.17
287 288 1.620323 GAAACCCTGCAGGCTTTGATT 59.380 47.619 27.08 14.96 40.58 2.57
288 289 1.203100 AGAAACCCTGCAGGCTTTGAT 60.203 47.619 27.08 14.47 40.58 2.57
289 290 0.185901 AGAAACCCTGCAGGCTTTGA 59.814 50.000 27.08 0.00 40.58 2.69
290 291 1.815003 CTAGAAACCCTGCAGGCTTTG 59.185 52.381 27.08 16.68 40.58 2.77
291 292 1.425448 ACTAGAAACCCTGCAGGCTTT 59.575 47.619 28.39 25.57 40.58 3.51
292 293 1.068121 ACTAGAAACCCTGCAGGCTT 58.932 50.000 28.39 21.44 40.58 4.35
293 294 1.834263 CTACTAGAAACCCTGCAGGCT 59.166 52.381 28.39 20.35 40.58 4.58
294 295 1.831736 TCTACTAGAAACCCTGCAGGC 59.168 52.381 28.39 13.74 40.58 4.85
295 296 3.452627 ACATCTACTAGAAACCCTGCAGG 59.547 47.826 26.87 26.87 43.78 4.85
296 297 4.744795 ACATCTACTAGAAACCCTGCAG 57.255 45.455 6.78 6.78 0.00 4.41
297 298 6.808321 AATACATCTACTAGAAACCCTGCA 57.192 37.500 0.00 0.00 0.00 4.41
298 299 8.202137 TGTTAATACATCTACTAGAAACCCTGC 58.798 37.037 0.00 0.00 0.00 4.85
312 313 9.817809 AGTGATACATCGTTTGTTAATACATCT 57.182 29.630 0.00 0.00 39.87 2.90
318 319 9.959749 ACAAAAAGTGATACATCGTTTGTTAAT 57.040 25.926 0.00 0.00 39.87 1.40
336 337 7.148656 GCGGTTTATATTTCATGCACAAAAAGT 60.149 33.333 0.00 0.00 0.00 2.66
337 338 7.172757 GCGGTTTATATTTCATGCACAAAAAG 58.827 34.615 0.00 0.00 0.00 2.27
338 339 6.091441 GGCGGTTTATATTTCATGCACAAAAA 59.909 34.615 0.00 0.00 0.00 1.94
339 340 5.578727 GGCGGTTTATATTTCATGCACAAAA 59.421 36.000 0.00 0.00 0.00 2.44
340 341 5.105752 GGCGGTTTATATTTCATGCACAAA 58.894 37.500 0.00 0.00 0.00 2.83
341 342 4.158579 TGGCGGTTTATATTTCATGCACAA 59.841 37.500 0.00 0.00 0.00 3.33
342 343 3.696548 TGGCGGTTTATATTTCATGCACA 59.303 39.130 0.00 0.00 0.00 4.57
343 344 4.300189 TGGCGGTTTATATTTCATGCAC 57.700 40.909 0.00 0.00 0.00 4.57
344 345 4.582240 TCATGGCGGTTTATATTTCATGCA 59.418 37.500 0.00 0.00 32.93 3.96
345 346 4.917415 GTCATGGCGGTTTATATTTCATGC 59.083 41.667 0.00 0.00 32.93 4.06
346 347 5.146460 CGTCATGGCGGTTTATATTTCATG 58.854 41.667 12.98 0.00 33.83 3.07
347 348 4.215399 CCGTCATGGCGGTTTATATTTCAT 59.785 41.667 30.40 0.00 46.11 2.57
348 349 3.562141 CCGTCATGGCGGTTTATATTTCA 59.438 43.478 30.40 0.00 46.11 2.69
349 350 4.141855 CCGTCATGGCGGTTTATATTTC 57.858 45.455 30.40 0.00 46.11 2.17
362 363 2.099141 TTGAGAGAAAGCCGTCATGG 57.901 50.000 0.00 0.00 42.50 3.66
363 364 4.488126 TTTTTGAGAGAAAGCCGTCATG 57.512 40.909 0.00 0.00 0.00 3.07
389 390 5.359756 GGACCTGCTGATTTGTTTCTTTTT 58.640 37.500 0.00 0.00 0.00 1.94
390 391 4.499696 CGGACCTGCTGATTTGTTTCTTTT 60.500 41.667 0.00 0.00 0.00 2.27
391 392 3.004734 CGGACCTGCTGATTTGTTTCTTT 59.995 43.478 0.00 0.00 0.00 2.52
392 393 2.554032 CGGACCTGCTGATTTGTTTCTT 59.446 45.455 0.00 0.00 0.00 2.52
393 394 2.154462 CGGACCTGCTGATTTGTTTCT 58.846 47.619 0.00 0.00 0.00 2.52
394 395 1.880027 ACGGACCTGCTGATTTGTTTC 59.120 47.619 0.00 0.00 0.00 2.78
395 396 1.981256 ACGGACCTGCTGATTTGTTT 58.019 45.000 0.00 0.00 0.00 2.83
396 397 2.851263 TACGGACCTGCTGATTTGTT 57.149 45.000 0.00 0.00 0.00 2.83
397 398 2.851263 TTACGGACCTGCTGATTTGT 57.149 45.000 0.00 0.00 0.00 2.83
398 399 4.438744 GGATTTTACGGACCTGCTGATTTG 60.439 45.833 0.00 0.00 0.00 2.32
399 400 3.694566 GGATTTTACGGACCTGCTGATTT 59.305 43.478 0.00 0.00 0.00 2.17
400 401 3.279434 GGATTTTACGGACCTGCTGATT 58.721 45.455 0.00 0.00 0.00 2.57
401 402 2.421529 GGGATTTTACGGACCTGCTGAT 60.422 50.000 0.00 0.00 0.00 2.90
402 403 1.065709 GGGATTTTACGGACCTGCTGA 60.066 52.381 0.00 0.00 0.00 4.26
403 404 1.379527 GGGATTTTACGGACCTGCTG 58.620 55.000 0.00 0.00 0.00 4.41
404 405 0.107848 CGGGATTTTACGGACCTGCT 60.108 55.000 0.00 0.00 0.00 4.24
405 406 0.392060 ACGGGATTTTACGGACCTGC 60.392 55.000 0.00 0.00 32.61 4.85
406 407 1.735571 CAACGGGATTTTACGGACCTG 59.264 52.381 0.00 0.00 35.21 4.00
407 408 1.947212 GCAACGGGATTTTACGGACCT 60.947 52.381 0.00 0.00 0.00 3.85
408 409 0.448990 GCAACGGGATTTTACGGACC 59.551 55.000 0.00 0.00 0.00 4.46
409 410 1.445871 AGCAACGGGATTTTACGGAC 58.554 50.000 0.00 0.00 0.00 4.79
410 411 2.188062 AAGCAACGGGATTTTACGGA 57.812 45.000 0.00 0.00 0.00 4.69
411 412 3.437741 ACTAAAGCAACGGGATTTTACGG 59.562 43.478 0.00 0.00 36.35 4.02
412 413 4.399978 CACTAAAGCAACGGGATTTTACG 58.600 43.478 0.00 0.00 36.35 3.18
413 414 4.163552 GCACTAAAGCAACGGGATTTTAC 58.836 43.478 0.00 0.00 36.35 2.01
414 415 3.120130 CGCACTAAAGCAACGGGATTTTA 60.120 43.478 0.00 0.00 36.35 1.52
415 416 2.351350 CGCACTAAAGCAACGGGATTTT 60.351 45.455 0.00 0.00 36.35 1.82
416 417 1.199097 CGCACTAAAGCAACGGGATTT 59.801 47.619 0.00 0.00 38.85 2.17
417 418 0.802494 CGCACTAAAGCAACGGGATT 59.198 50.000 0.00 0.00 0.00 3.01
418 419 0.321298 ACGCACTAAAGCAACGGGAT 60.321 50.000 0.00 0.00 0.00 3.85
419 420 1.070105 ACGCACTAAAGCAACGGGA 59.930 52.632 0.00 0.00 0.00 5.14
420 421 1.206578 CACGCACTAAAGCAACGGG 59.793 57.895 0.00 0.00 0.00 5.28
421 422 1.141645 TACACGCACTAAAGCAACGG 58.858 50.000 0.00 0.00 0.00 4.44
422 423 2.666508 AGATACACGCACTAAAGCAACG 59.333 45.455 0.00 0.00 0.00 4.10
423 424 4.259850 GCTAGATACACGCACTAAAGCAAC 60.260 45.833 0.00 0.00 0.00 4.17
424 425 3.863424 GCTAGATACACGCACTAAAGCAA 59.137 43.478 0.00 0.00 0.00 3.91
425 426 3.119280 TGCTAGATACACGCACTAAAGCA 60.119 43.478 0.00 0.00 0.00 3.91
426 427 3.444916 TGCTAGATACACGCACTAAAGC 58.555 45.455 0.00 0.00 0.00 3.51
427 428 6.589830 AAATGCTAGATACACGCACTAAAG 57.410 37.500 0.00 0.00 36.37 1.85
428 429 6.978343 AAAATGCTAGATACACGCACTAAA 57.022 33.333 0.00 0.00 36.37 1.85
429 430 6.183360 CCAAAAATGCTAGATACACGCACTAA 60.183 38.462 0.00 0.00 36.37 2.24
430 431 5.293324 CCAAAAATGCTAGATACACGCACTA 59.707 40.000 0.00 0.00 36.37 2.74
431 432 4.094887 CCAAAAATGCTAGATACACGCACT 59.905 41.667 0.00 0.00 36.37 4.40
432 433 4.142687 ACCAAAAATGCTAGATACACGCAC 60.143 41.667 0.00 0.00 36.37 5.34
433 434 4.006989 ACCAAAAATGCTAGATACACGCA 58.993 39.130 0.00 0.00 38.14 5.24
434 435 4.616181 ACCAAAAATGCTAGATACACGC 57.384 40.909 0.00 0.00 0.00 5.34
435 436 6.656314 TGTACCAAAAATGCTAGATACACG 57.344 37.500 0.00 0.00 0.00 4.49
436 437 8.208718 TGATGTACCAAAAATGCTAGATACAC 57.791 34.615 0.00 0.00 0.00 2.90
437 438 7.012327 GCTGATGTACCAAAAATGCTAGATACA 59.988 37.037 0.00 0.00 0.00 2.29
438 439 7.355778 GCTGATGTACCAAAAATGCTAGATAC 58.644 38.462 0.00 0.00 0.00 2.24
439 440 6.486657 GGCTGATGTACCAAAAATGCTAGATA 59.513 38.462 0.00 0.00 0.00 1.98
440 441 5.300286 GGCTGATGTACCAAAAATGCTAGAT 59.700 40.000 0.00 0.00 0.00 1.98
441 442 4.640201 GGCTGATGTACCAAAAATGCTAGA 59.360 41.667 0.00 0.00 0.00 2.43
442 443 4.398988 TGGCTGATGTACCAAAAATGCTAG 59.601 41.667 0.00 0.00 31.46 3.42
443 444 4.157656 GTGGCTGATGTACCAAAAATGCTA 59.842 41.667 0.00 0.00 37.79 3.49
444 445 3.056607 GTGGCTGATGTACCAAAAATGCT 60.057 43.478 0.00 0.00 37.79 3.79
445 446 3.253230 GTGGCTGATGTACCAAAAATGC 58.747 45.455 0.00 0.00 37.79 3.56
446 447 4.517952 TGTGGCTGATGTACCAAAAATG 57.482 40.909 0.00 0.00 37.79 2.32
447 448 4.160252 GGATGTGGCTGATGTACCAAAAAT 59.840 41.667 0.00 0.00 37.79 1.82
448 449 3.509575 GGATGTGGCTGATGTACCAAAAA 59.490 43.478 0.00 0.00 37.79 1.94
449 450 3.088532 GGATGTGGCTGATGTACCAAAA 58.911 45.455 0.00 0.00 37.79 2.44
450 451 2.722094 GGATGTGGCTGATGTACCAAA 58.278 47.619 0.00 0.00 37.79 3.28
451 452 1.406751 CGGATGTGGCTGATGTACCAA 60.407 52.381 0.00 0.00 37.79 3.67
452 453 0.177836 CGGATGTGGCTGATGTACCA 59.822 55.000 0.00 0.00 0.00 3.25
453 454 0.464036 TCGGATGTGGCTGATGTACC 59.536 55.000 0.00 0.00 0.00 3.34
494 495 1.480219 CGCGTACGATTCTGGCTTCC 61.480 60.000 21.65 0.00 43.93 3.46
546 547 6.266103 ACACCATCATCATCAACTCTGTTTTT 59.734 34.615 0.00 0.00 0.00 1.94
550 551 4.259356 CACACCATCATCATCAACTCTGT 58.741 43.478 0.00 0.00 0.00 3.41
551 552 4.259356 ACACACCATCATCATCAACTCTG 58.741 43.478 0.00 0.00 0.00 3.35
552 553 4.511527 GACACACCATCATCATCAACTCT 58.488 43.478 0.00 0.00 0.00 3.24
553 554 3.624861 GGACACACCATCATCATCAACTC 59.375 47.826 0.00 0.00 38.79 3.01
554 555 3.614092 GGACACACCATCATCATCAACT 58.386 45.455 0.00 0.00 38.79 3.16
557 558 1.554617 ACGGACACACCATCATCATCA 59.445 47.619 0.00 0.00 38.90 3.07
558 559 2.205074 GACGGACACACCATCATCATC 58.795 52.381 0.00 0.00 38.90 2.92
559 560 1.554617 TGACGGACACACCATCATCAT 59.445 47.619 0.00 0.00 35.86 2.45
560 561 0.972883 TGACGGACACACCATCATCA 59.027 50.000 0.00 0.00 35.86 3.07
561 562 2.315925 ATGACGGACACACCATCATC 57.684 50.000 0.00 0.00 46.83 2.92
563 564 0.249120 GGATGACGGACACACCATCA 59.751 55.000 0.00 0.00 45.05 3.07
564 565 0.537188 AGGATGACGGACACACCATC 59.463 55.000 0.00 0.00 38.90 3.51
565 566 1.860641 TAGGATGACGGACACACCAT 58.139 50.000 7.81 0.00 38.90 3.55
566 567 1.860641 ATAGGATGACGGACACACCA 58.139 50.000 7.81 0.00 38.90 4.17
568 569 4.945246 ACATTATAGGATGACGGACACAC 58.055 43.478 0.00 0.00 0.00 3.82
570 571 5.710984 CCTACATTATAGGATGACGGACAC 58.289 45.833 0.00 0.00 36.85 3.67
576 577 4.381718 GGACGGCCTACATTATAGGATGAC 60.382 50.000 0.00 0.00 36.85 3.06
577 578 3.767673 GGACGGCCTACATTATAGGATGA 59.232 47.826 0.00 0.00 36.85 2.92
578 579 3.428999 CGGACGGCCTACATTATAGGATG 60.429 52.174 5.33 0.00 36.85 3.51
579 580 2.758979 CGGACGGCCTACATTATAGGAT 59.241 50.000 5.33 0.00 36.85 3.24
581 582 2.165167 TCGGACGGCCTACATTATAGG 58.835 52.381 5.33 0.00 37.75 2.57
582 583 4.451629 AATCGGACGGCCTACATTATAG 57.548 45.455 5.33 0.00 0.00 1.31
584 585 3.764237 AAATCGGACGGCCTACATTAT 57.236 42.857 5.33 0.00 0.00 1.28
586 587 3.764237 ATAAATCGGACGGCCTACATT 57.236 42.857 5.33 0.00 0.00 2.71
587 588 4.710375 AGATATAAATCGGACGGCCTACAT 59.290 41.667 5.33 0.00 37.19 2.29
589 590 4.157289 TCAGATATAAATCGGACGGCCTAC 59.843 45.833 5.33 0.00 37.19 3.18
590 591 4.157289 GTCAGATATAAATCGGACGGCCTA 59.843 45.833 5.33 0.00 43.98 3.93
591 592 3.056749 GTCAGATATAAATCGGACGGCCT 60.057 47.826 5.33 0.00 43.98 5.19
599 1858 8.459635 TCCTTTCTATCCGTCAGATATAAATCG 58.540 37.037 0.00 0.00 36.84 3.34
609 1868 5.986135 CCATAGTTTCCTTTCTATCCGTCAG 59.014 44.000 0.00 0.00 0.00 3.51
610 1869 5.684030 GCCATAGTTTCCTTTCTATCCGTCA 60.684 44.000 0.00 0.00 0.00 4.35
611 1870 4.750598 GCCATAGTTTCCTTTCTATCCGTC 59.249 45.833 0.00 0.00 0.00 4.79
612 1871 4.163458 TGCCATAGTTTCCTTTCTATCCGT 59.837 41.667 0.00 0.00 0.00 4.69
613 1872 4.703897 TGCCATAGTTTCCTTTCTATCCG 58.296 43.478 0.00 0.00 0.00 4.18
614 1873 7.588497 AATTGCCATAGTTTCCTTTCTATCC 57.412 36.000 0.00 0.00 0.00 2.59
631 1890 8.816894 TGTGGGTATTCTTTTATAAAATTGCCA 58.183 29.630 10.97 1.51 0.00 4.92
632 1891 9.093970 GTGTGGGTATTCTTTTATAAAATTGCC 57.906 33.333 10.97 11.13 0.00 4.52
633 1892 9.646427 TGTGTGGGTATTCTTTTATAAAATTGC 57.354 29.630 10.97 3.86 0.00 3.56
636 1895 9.541884 AGGTGTGTGGGTATTCTTTTATAAAAT 57.458 29.630 10.97 0.00 0.00 1.82
637 1896 8.943594 AGGTGTGTGGGTATTCTTTTATAAAA 57.056 30.769 10.16 10.16 0.00 1.52
639 1898 7.924541 AGAGGTGTGTGGGTATTCTTTTATAA 58.075 34.615 0.00 0.00 0.00 0.98
643 1902 4.724279 AGAGGTGTGTGGGTATTCTTTT 57.276 40.909 0.00 0.00 0.00 2.27
644 1903 4.104102 TGAAGAGGTGTGTGGGTATTCTTT 59.896 41.667 0.00 0.00 0.00 2.52
645 1904 3.650942 TGAAGAGGTGTGTGGGTATTCTT 59.349 43.478 0.00 0.00 0.00 2.52
646 1905 3.008049 GTGAAGAGGTGTGTGGGTATTCT 59.992 47.826 0.00 0.00 0.00 2.40
647 1906 3.244422 TGTGAAGAGGTGTGTGGGTATTC 60.244 47.826 0.00 0.00 0.00 1.75
648 1907 2.708861 TGTGAAGAGGTGTGTGGGTATT 59.291 45.455 0.00 0.00 0.00 1.89
649 1908 2.334977 TGTGAAGAGGTGTGTGGGTAT 58.665 47.619 0.00 0.00 0.00 2.73
651 1910 1.140312 ATGTGAAGAGGTGTGTGGGT 58.860 50.000 0.00 0.00 0.00 4.51
652 1911 2.276732 AATGTGAAGAGGTGTGTGGG 57.723 50.000 0.00 0.00 0.00 4.61
653 1912 2.287788 GCAAATGTGAAGAGGTGTGTGG 60.288 50.000 0.00 0.00 0.00 4.17
654 1913 2.358582 TGCAAATGTGAAGAGGTGTGTG 59.641 45.455 0.00 0.00 0.00 3.82
655 1914 2.653726 TGCAAATGTGAAGAGGTGTGT 58.346 42.857 0.00 0.00 0.00 3.72
656 1915 3.713858 TTGCAAATGTGAAGAGGTGTG 57.286 42.857 0.00 0.00 0.00 3.82
657 1916 4.942761 ATTTGCAAATGTGAAGAGGTGT 57.057 36.364 23.54 0.00 0.00 4.16
660 1919 6.917533 AGTCTTATTTGCAAATGTGAAGAGG 58.082 36.000 30.43 12.85 0.00 3.69
661 1920 8.807667 AAAGTCTTATTTGCAAATGTGAAGAG 57.192 30.769 30.43 18.11 0.00 2.85
662 1921 7.867403 GGAAAGTCTTATTTGCAAATGTGAAGA 59.133 33.333 30.43 26.25 31.47 2.87
663 1922 7.869429 AGGAAAGTCTTATTTGCAAATGTGAAG 59.131 33.333 30.43 24.72 33.37 3.02
664 1923 7.725251 AGGAAAGTCTTATTTGCAAATGTGAA 58.275 30.769 30.43 17.77 33.37 3.18
665 1924 7.288810 AGGAAAGTCTTATTTGCAAATGTGA 57.711 32.000 30.43 23.80 33.37 3.58
722 2508 8.950961 CGAAACATTAAGATGCATTTGTATGAG 58.049 33.333 14.83 0.93 36.72 2.90
725 2511 7.220683 GCACGAAACATTAAGATGCATTTGTAT 59.779 33.333 0.00 0.00 36.72 2.29
726 2512 6.526325 GCACGAAACATTAAGATGCATTTGTA 59.474 34.615 0.00 0.00 36.72 2.41
727 2513 5.345741 GCACGAAACATTAAGATGCATTTGT 59.654 36.000 0.00 0.00 36.72 2.83
728 2514 5.345472 TGCACGAAACATTAAGATGCATTTG 59.655 36.000 0.00 0.00 36.72 2.32
729 2515 5.468592 TGCACGAAACATTAAGATGCATTT 58.531 33.333 0.00 0.00 36.72 2.32
731 2517 4.700268 TGCACGAAACATTAAGATGCAT 57.300 36.364 0.00 0.00 36.72 3.96
732 2518 4.495911 TTGCACGAAACATTAAGATGCA 57.504 36.364 0.00 0.00 39.68 3.96
733 2519 4.259530 GCATTGCACGAAACATTAAGATGC 60.260 41.667 3.15 0.00 36.72 3.91
734 2520 4.858140 TGCATTGCACGAAACATTAAGATG 59.142 37.500 7.38 0.00 34.77 2.90
735 2521 5.058149 TGCATTGCACGAAACATTAAGAT 57.942 34.783 7.38 0.00 31.71 2.40
736 2522 4.495911 TGCATTGCACGAAACATTAAGA 57.504 36.364 7.38 0.00 31.71 2.10
786 3290 1.455032 CCGCCTGGATTTTACCCCC 60.455 63.158 0.00 0.00 37.49 5.40
787 3291 1.455032 CCCGCCTGGATTTTACCCC 60.455 63.158 0.00 0.00 37.49 4.95
791 3295 2.172679 GTTTTCCCCGCCTGGATTTTA 58.827 47.619 0.00 0.00 37.49 1.52
803 3307 1.254026 CTCCTTTTCCGGTTTTCCCC 58.746 55.000 0.00 0.00 36.42 4.81
935 3439 2.935481 CTCCTGCCCAGTCCCCAA 60.935 66.667 0.00 0.00 0.00 4.12
989 3493 0.676782 CGTCACCATTTGAGTCCCCC 60.677 60.000 0.00 0.00 33.71 5.40
1078 3582 3.931247 CGGTGGGTGTGGTTCGGA 61.931 66.667 0.00 0.00 0.00 4.55
1725 4265 2.341176 GTGTTGGCGACGTAGGGT 59.659 61.111 0.00 0.00 0.00 4.34
2109 4649 0.954452 CAGCACTTTCCTGGAACACC 59.046 55.000 9.04 0.00 0.00 4.16
2241 4781 5.625150 AGACTGGCAAGAGTAAACTCATTT 58.375 37.500 12.43 0.00 45.21 2.32
2679 5301 1.542492 CAGCTCTGCCCAACAAATCT 58.458 50.000 0.00 0.00 0.00 2.40
2757 5379 3.354089 AGCAAAGATGTCCAAACAACG 57.646 42.857 0.00 0.00 39.30 4.10
3323 5983 2.348411 ATACCAAGATCAAAGCCCCG 57.652 50.000 0.00 0.00 0.00 5.73
3342 6002 7.615365 AGGCAATCAACCATCTTATCAAAAGTA 59.385 33.333 0.00 0.00 0.00 2.24
3576 6236 4.044571 AGAGAGAAAAACATCAATCCCCCA 59.955 41.667 0.00 0.00 0.00 4.96
3594 6254 4.021544 AGGCACACACTTCTTAAGAGAGAG 60.022 45.833 16.61 10.22 32.44 3.20
4108 6771 6.918569 TCGAACTTAGATACTTTGCTGATAGC 59.081 38.462 0.00 0.00 42.82 2.97
4148 6811 5.422666 TGTGCACATCAGTTCTAAGTTTG 57.577 39.130 17.42 0.00 0.00 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.