Multiple sequence alignment - TraesCS6A01G168100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G168100 chr6A 100.000 4957 0 0 1 4957 172135579 172130623 0.000000e+00 9154.0
1 TraesCS6A01G168100 chr6A 83.178 107 14 3 4621 4727 557557835 557557937 1.470000e-15 95.3
2 TraesCS6A01G168100 chr6D 91.039 3560 203 54 894 4367 133229582 133226053 0.000000e+00 4700.0
3 TraesCS6A01G168100 chr6D 92.320 638 43 2 1 634 133288568 133287933 0.000000e+00 902.0
4 TraesCS6A01G168100 chr6D 91.440 257 10 3 4713 4957 133226021 133225765 4.750000e-90 342.0
5 TraesCS6A01G168100 chr6D 91.444 187 12 2 4425 4607 258227637 258227451 2.290000e-63 254.0
6 TraesCS6A01G168100 chr6D 90.374 187 14 2 4425 4607 257505178 257504992 4.960000e-60 243.0
7 TraesCS6A01G168100 chr6D 93.182 44 3 0 4358 4401 84938554 84938511 1.150000e-06 65.8
8 TraesCS6A01G168100 chr6B 93.758 1506 63 14 2359 3849 231684421 231682932 0.000000e+00 2231.0
9 TraesCS6A01G168100 chr6B 91.166 1449 81 23 895 2305 231685855 231684416 0.000000e+00 1923.0
10 TraesCS6A01G168100 chr6B 82.727 550 50 22 3844 4367 231682883 231682353 9.790000e-122 448.0
11 TraesCS6A01G168100 chr6B 88.213 263 13 6 4713 4957 231682313 231682051 1.040000e-76 298.0
12 TraesCS6A01G168100 chr6B 88.235 187 17 3 4425 4607 256976183 256975998 8.350000e-53 219.0
13 TraesCS6A01G168100 chr5A 90.272 257 22 3 647 903 609286031 609286284 2.860000e-87 333.0
14 TraesCS6A01G168100 chr5B 91.322 242 20 1 654 895 632157018 632157258 3.700000e-86 329.0
15 TraesCS6A01G168100 chr5B 88.506 87 10 0 4622 4708 508685577 508685491 6.790000e-19 106.0
16 TraesCS6A01G168100 chr5B 86.364 88 12 0 4621 4708 276947131 276947044 4.080000e-16 97.1
17 TraesCS6A01G168100 chr5B 100.000 36 0 0 4366 4401 568409770 568409735 3.200000e-07 67.6
18 TraesCS6A01G168100 chr4A 90.196 255 22 3 649 902 606660926 606661178 3.700000e-86 329.0
19 TraesCS6A01G168100 chrUn 90.984 244 20 2 653 895 266580219 266579977 1.330000e-85 327.0
20 TraesCS6A01G168100 chr2A 90.650 246 23 0 654 899 499725281 499725036 1.330000e-85 327.0
21 TraesCS6A01G168100 chr2A 89.535 258 23 3 653 910 84977770 84977517 1.720000e-84 324.0
22 TraesCS6A01G168100 chr1A 90.726 248 18 3 652 897 370100293 370100537 4.790000e-85 326.0
23 TraesCS6A01G168100 chr1A 87.234 188 17 3 4425 4606 583582398 583582584 1.810000e-49 207.0
24 TraesCS6A01G168100 chr7A 89.804 255 20 6 644 895 247202391 247202642 6.190000e-84 322.0
25 TraesCS6A01G168100 chr7A 86.631 187 21 2 4425 4607 592300567 592300381 2.340000e-48 204.0
26 TraesCS6A01G168100 chr7A 85.714 98 13 1 4621 4717 718263446 718263349 8.780000e-18 102.0
27 TraesCS6A01G168100 chr7A 97.297 37 1 0 4368 4404 211809119 211809083 4.140000e-06 63.9
28 TraesCS6A01G168100 chr3A 88.764 267 25 5 632 896 365467996 365468259 6.190000e-84 322.0
29 TraesCS6A01G168100 chr5D 89.773 176 14 2 4436 4607 15660896 15661071 6.460000e-54 222.0
30 TraesCS6A01G168100 chr5D 89.873 79 6 2 4622 4699 475685591 475685668 3.160000e-17 100.0
31 TraesCS6A01G168100 chr5D 97.222 36 1 0 4366 4401 356319438 356319473 1.490000e-05 62.1
32 TraesCS6A01G168100 chr3D 87.766 188 18 3 4425 4607 23852145 23851958 1.080000e-51 215.0
33 TraesCS6A01G168100 chr4B 88.506 174 16 2 4435 4604 43060848 43060675 1.810000e-49 207.0
34 TraesCS6A01G168100 chr4B 90.909 44 3 1 4359 4401 16501621 16501578 1.930000e-04 58.4
35 TraesCS6A01G168100 chr2B 86.559 186 19 4 4425 4606 515614200 515614017 3.030000e-47 200.0
36 TraesCS6A01G168100 chr7B 76.923 273 38 12 4436 4708 387424878 387424631 1.120000e-26 132.0
37 TraesCS6A01G168100 chr7B 100.000 36 0 0 4366 4401 521143309 521143274 3.200000e-07 67.6
38 TraesCS6A01G168100 chr7D 75.000 296 47 15 4425 4718 11938807 11939077 1.460000e-20 111.0
39 TraesCS6A01G168100 chr7D 91.463 82 6 1 4621 4702 249956608 249956688 1.460000e-20 111.0
40 TraesCS6A01G168100 chr7D 91.463 82 6 1 4621 4702 250087377 250087457 1.460000e-20 111.0
41 TraesCS6A01G168100 chr7D 95.000 40 1 1 4362 4401 447070931 447070893 1.490000e-05 62.1
42 TraesCS6A01G168100 chr4D 97.222 36 1 0 4366 4401 5581873 5581908 1.490000e-05 62.1
43 TraesCS6A01G168100 chr3B 88.000 50 4 1 4346 4393 207831115 207831164 1.930000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G168100 chr6A 172130623 172135579 4956 True 9154 9154 100.0000 1 4957 1 chr6A.!!$R1 4956
1 TraesCS6A01G168100 chr6D 133225765 133229582 3817 True 2521 4700 91.2395 894 4957 2 chr6D.!!$R5 4063
2 TraesCS6A01G168100 chr6D 133287933 133288568 635 True 902 902 92.3200 1 634 1 chr6D.!!$R2 633
3 TraesCS6A01G168100 chr6B 231682051 231685855 3804 True 1225 2231 88.9660 895 4957 4 chr6B.!!$R2 4062

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
701 706 0.030101 CCGCGCTTTTCAAGGTTCAA 59.970 50.0 5.56 0.0 0.00 2.69 F
812 817 0.102300 ATAATTTTTGCTCCCGCCGC 59.898 50.0 0.00 0.0 34.43 6.53 F
1638 1689 0.179119 GCAGCTGCATCAAATGGGTC 60.179 55.0 33.36 0.0 41.59 4.46 F
1650 1701 1.064825 AATGGGTCCAGGAGTCGTTT 58.935 50.0 0.00 0.0 0.00 3.60 F
2654 2708 1.357907 CCCGTACGCAAATTCGGTAA 58.642 50.0 10.49 0.0 41.17 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1716 1767 0.172578 CATCCTTGTACCGCTCGTCA 59.827 55.000 0.0 0.0 0.00 4.35 R
1719 1770 1.338337 AGATCATCCTTGTACCGCTCG 59.662 52.381 0.0 0.0 0.00 5.03 R
3531 3590 0.179004 TGTGGAAACGGAAGGTGCAT 60.179 50.000 0.0 0.0 0.00 3.96 R
3607 3669 3.343617 CGGGTTCTCCTTAAGCAATTCA 58.656 45.455 0.0 0.0 0.00 2.57 R
4072 4209 0.109597 CGAGCTGTTGCAAATGGGAC 60.110 55.000 0.0 0.0 42.74 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 7.606073 GGGCACAATTAAATAAAAATGTGGAGT 59.394 33.333 13.90 0.00 38.47 3.85
73 74 8.442384 GGCACAATTAAATAAAAATGTGGAGTG 58.558 33.333 13.90 0.00 38.47 3.51
77 78 7.810766 ATTAAATAAAAATGTGGAGTGCACG 57.189 32.000 12.01 0.00 0.00 5.34
79 80 5.446143 AATAAAAATGTGGAGTGCACGAA 57.554 34.783 12.01 0.00 0.00 3.85
93 94 6.472163 GGAGTGCACGAAATAAATACATTTGG 59.528 38.462 12.01 0.00 31.95 3.28
115 116 4.750098 GGTACGGATTAAGACATGGACATG 59.250 45.833 10.57 10.57 44.15 3.21
126 131 2.036217 ACATGGACATGGTTTGCACTTG 59.964 45.455 15.94 0.00 42.91 3.16
164 169 4.613944 TCTTGTACGTTGTCTCGAAATGT 58.386 39.130 0.00 0.00 34.70 2.71
168 173 5.701855 TGTACGTTGTCTCGAAATGTCATA 58.298 37.500 0.00 0.00 34.70 2.15
205 210 5.293569 GCGTGTTATAACTAAGGATGCAAGT 59.706 40.000 16.33 0.00 0.00 3.16
214 219 1.450312 GGATGCAAGTGGAGTCCCG 60.450 63.158 6.74 0.00 34.29 5.14
234 239 3.181443 CCGCTTATCCCCTTAAACCAGAT 60.181 47.826 0.00 0.00 0.00 2.90
255 260 5.892119 AGATAATTAGTTCACCTCTGACCGA 59.108 40.000 0.00 0.00 0.00 4.69
331 336 2.359981 ACATGCAAGCATAGCCTCAT 57.640 45.000 7.29 0.00 34.91 2.90
437 442 7.599998 GTCTTATCAATTGATTGCCAACACTTT 59.400 33.333 25.26 0.50 37.63 2.66
459 464 4.780815 TGAGCTTTGATTACCATTCGGAT 58.219 39.130 0.00 0.00 35.59 4.18
471 476 2.092429 CCATTCGGATCCCCTCTTGAAA 60.092 50.000 6.06 0.00 0.00 2.69
508 513 5.890334 TGAGGATGCGGATTTTTAACATTC 58.110 37.500 0.00 0.00 0.00 2.67
509 514 4.920376 AGGATGCGGATTTTTAACATTCG 58.080 39.130 0.00 0.00 0.00 3.34
513 518 2.851824 GCGGATTTTTAACATTCGCCAG 59.148 45.455 5.54 0.00 36.35 4.85
523 528 7.579589 TTTAACATTCGCCAGAAAATCATTG 57.420 32.000 0.00 0.00 40.15 2.82
598 603 7.907389 TGTTCTGTAGAATAGTGTTTCTGGAT 58.093 34.615 0.00 0.00 36.63 3.41
599 604 9.031537 TGTTCTGTAGAATAGTGTTTCTGGATA 57.968 33.333 0.00 0.00 36.63 2.59
633 638 8.996024 AATTTTCGGGGATAATACTGTTTTTG 57.004 30.769 0.00 0.00 0.00 2.44
634 639 7.762588 TTTTCGGGGATAATACTGTTTTTGA 57.237 32.000 0.00 0.00 0.00 2.69
635 640 7.762588 TTTCGGGGATAATACTGTTTTTGAA 57.237 32.000 0.00 0.00 0.00 2.69
636 641 7.948034 TTCGGGGATAATACTGTTTTTGAAT 57.052 32.000 0.00 0.00 0.00 2.57
637 642 7.328277 TCGGGGATAATACTGTTTTTGAATG 57.672 36.000 0.00 0.00 0.00 2.67
638 643 5.977129 CGGGGATAATACTGTTTTTGAATGC 59.023 40.000 0.00 0.00 0.00 3.56
639 644 6.405286 CGGGGATAATACTGTTTTTGAATGCA 60.405 38.462 0.00 0.00 0.00 3.96
640 645 7.500141 GGGGATAATACTGTTTTTGAATGCAT 58.500 34.615 0.00 0.00 0.00 3.96
641 646 7.439056 GGGGATAATACTGTTTTTGAATGCATG 59.561 37.037 0.00 0.00 0.00 4.06
642 647 8.196771 GGGATAATACTGTTTTTGAATGCATGA 58.803 33.333 0.00 0.00 0.00 3.07
643 648 9.585099 GGATAATACTGTTTTTGAATGCATGAA 57.415 29.630 0.00 0.00 0.00 2.57
647 652 8.752766 ATACTGTTTTTGAATGCATGAAGAAG 57.247 30.769 0.00 0.00 0.00 2.85
648 653 6.808829 ACTGTTTTTGAATGCATGAAGAAGA 58.191 32.000 0.00 0.00 0.00 2.87
649 654 7.267128 ACTGTTTTTGAATGCATGAAGAAGAA 58.733 30.769 0.00 0.00 0.00 2.52
650 655 7.929785 ACTGTTTTTGAATGCATGAAGAAGAAT 59.070 29.630 0.00 0.00 0.00 2.40
651 656 8.301730 TGTTTTTGAATGCATGAAGAAGAATC 57.698 30.769 0.00 0.00 0.00 2.52
652 657 7.927092 TGTTTTTGAATGCATGAAGAAGAATCA 59.073 29.630 0.00 0.00 0.00 2.57
653 658 8.932791 GTTTTTGAATGCATGAAGAAGAATCAT 58.067 29.630 0.00 0.00 38.02 2.45
655 660 9.577110 TTTTGAATGCATGAAGAAGAATCATAC 57.423 29.630 0.00 0.00 35.80 2.39
656 661 8.515695 TTGAATGCATGAAGAAGAATCATACT 57.484 30.769 0.00 0.00 35.80 2.12
657 662 8.151141 TGAATGCATGAAGAAGAATCATACTC 57.849 34.615 0.00 0.00 35.80 2.59
658 663 7.228108 TGAATGCATGAAGAAGAATCATACTCC 59.772 37.037 0.00 0.00 35.80 3.85
659 664 5.371526 TGCATGAAGAAGAATCATACTCCC 58.628 41.667 0.00 0.00 35.80 4.30
660 665 5.131642 TGCATGAAGAAGAATCATACTCCCT 59.868 40.000 0.00 0.00 35.80 4.20
661 666 6.060788 GCATGAAGAAGAATCATACTCCCTT 58.939 40.000 0.00 0.00 35.80 3.95
662 667 6.204495 GCATGAAGAAGAATCATACTCCCTTC 59.796 42.308 0.00 0.00 35.80 3.46
663 668 6.874278 TGAAGAAGAATCATACTCCCTTCA 57.126 37.500 0.00 0.00 36.59 3.02
664 669 7.443302 TGAAGAAGAATCATACTCCCTTCAT 57.557 36.000 0.00 0.00 36.59 2.57
665 670 7.865820 TGAAGAAGAATCATACTCCCTTCATT 58.134 34.615 0.00 0.00 36.59 2.57
666 671 7.989741 TGAAGAAGAATCATACTCCCTTCATTC 59.010 37.037 0.00 0.00 36.59 2.67
667 672 6.836242 AGAAGAATCATACTCCCTTCATTCC 58.164 40.000 0.00 0.00 36.59 3.01
668 673 6.388100 AGAAGAATCATACTCCCTTCATTCCA 59.612 38.462 0.00 0.00 36.59 3.53
669 674 6.581388 AGAATCATACTCCCTTCATTCCAA 57.419 37.500 0.00 0.00 0.00 3.53
670 675 6.973642 AGAATCATACTCCCTTCATTCCAAA 58.026 36.000 0.00 0.00 0.00 3.28
671 676 7.413446 AGAATCATACTCCCTTCATTCCAAAA 58.587 34.615 0.00 0.00 0.00 2.44
672 677 8.063770 AGAATCATACTCCCTTCATTCCAAAAT 58.936 33.333 0.00 0.00 0.00 1.82
673 678 9.354673 GAATCATACTCCCTTCATTCCAAAATA 57.645 33.333 0.00 0.00 0.00 1.40
674 679 9.887862 AATCATACTCCCTTCATTCCAAAATAT 57.112 29.630 0.00 0.00 0.00 1.28
677 682 9.799106 CATACTCCCTTCATTCCAAAATATAGT 57.201 33.333 0.00 0.00 0.00 2.12
678 683 9.799106 ATACTCCCTTCATTCCAAAATATAGTG 57.201 33.333 0.00 0.00 0.00 2.74
679 684 6.547510 ACTCCCTTCATTCCAAAATATAGTGC 59.452 38.462 0.00 0.00 0.00 4.40
680 685 5.530915 TCCCTTCATTCCAAAATATAGTGCG 59.469 40.000 0.00 0.00 0.00 5.34
681 686 5.299279 CCCTTCATTCCAAAATATAGTGCGT 59.701 40.000 0.00 0.00 0.00 5.24
682 687 6.430451 CCTTCATTCCAAAATATAGTGCGTC 58.570 40.000 0.00 0.00 0.00 5.19
683 688 6.371809 TTCATTCCAAAATATAGTGCGTCC 57.628 37.500 0.00 0.00 0.00 4.79
684 689 4.509970 TCATTCCAAAATATAGTGCGTCCG 59.490 41.667 0.00 0.00 0.00 4.79
685 690 2.206750 TCCAAAATATAGTGCGTCCGC 58.793 47.619 4.42 4.42 42.35 5.54
686 691 1.070843 CCAAAATATAGTGCGTCCGCG 60.071 52.381 7.22 0.00 45.51 6.46
696 701 2.173382 CGTCCGCGCTTTTCAAGG 59.827 61.111 5.56 0.00 0.00 3.61
697 702 2.604174 CGTCCGCGCTTTTCAAGGT 61.604 57.895 5.56 0.00 0.00 3.50
698 703 1.652563 GTCCGCGCTTTTCAAGGTT 59.347 52.632 5.56 0.00 0.00 3.50
699 704 0.385598 GTCCGCGCTTTTCAAGGTTC 60.386 55.000 5.56 0.00 0.00 3.62
700 705 0.816018 TCCGCGCTTTTCAAGGTTCA 60.816 50.000 5.56 0.00 0.00 3.18
701 706 0.030101 CCGCGCTTTTCAAGGTTCAA 59.970 50.000 5.56 0.00 0.00 2.69
702 707 1.120437 CGCGCTTTTCAAGGTTCAAC 58.880 50.000 5.56 0.00 0.00 3.18
703 708 1.268539 CGCGCTTTTCAAGGTTCAACT 60.269 47.619 5.56 0.00 0.00 3.16
704 709 2.794631 CGCGCTTTTCAAGGTTCAACTT 60.795 45.455 5.56 0.00 0.00 2.66
705 710 3.186909 GCGCTTTTCAAGGTTCAACTTT 58.813 40.909 0.00 0.00 0.00 2.66
706 711 3.000222 GCGCTTTTCAAGGTTCAACTTTG 60.000 43.478 6.04 6.04 36.63 2.77
707 712 4.420168 CGCTTTTCAAGGTTCAACTTTGA 58.580 39.130 10.89 10.89 41.53 2.69
708 713 4.265320 CGCTTTTCAAGGTTCAACTTTGAC 59.735 41.667 14.30 3.07 42.67 3.18
709 714 4.566759 GCTTTTCAAGGTTCAACTTTGACC 59.433 41.667 14.30 1.17 42.67 4.02
710 715 5.719173 CTTTTCAAGGTTCAACTTTGACCA 58.281 37.500 14.30 2.37 42.67 4.02
711 716 5.930837 TTTCAAGGTTCAACTTTGACCAT 57.069 34.783 14.30 0.00 42.67 3.55
712 717 7.411486 TTTTCAAGGTTCAACTTTGACCATA 57.589 32.000 14.30 0.00 42.67 2.74
713 718 7.411486 TTTCAAGGTTCAACTTTGACCATAA 57.589 32.000 14.30 4.15 42.67 1.90
714 719 7.411486 TTCAAGGTTCAACTTTGACCATAAA 57.589 32.000 14.30 0.00 42.67 1.40
715 720 7.595819 TCAAGGTTCAACTTTGACCATAAAT 57.404 32.000 10.89 0.00 38.94 1.40
716 721 8.017418 TCAAGGTTCAACTTTGACCATAAATT 57.983 30.769 10.89 0.00 38.94 1.82
717 722 8.482128 TCAAGGTTCAACTTTGACCATAAATTT 58.518 29.630 10.89 0.00 38.94 1.82
718 723 9.757227 CAAGGTTCAACTTTGACCATAAATTTA 57.243 29.630 6.54 0.00 37.36 1.40
720 725 9.758651 AGGTTCAACTTTGACCATAAATTTAAC 57.241 29.630 1.21 0.00 36.83 2.01
721 726 8.984764 GGTTCAACTTTGACCATAAATTTAACC 58.015 33.333 1.21 0.00 36.83 2.85
722 727 9.535878 GTTCAACTTTGACCATAAATTTAACCA 57.464 29.630 1.21 0.00 36.83 3.67
724 729 9.535878 TCAACTTTGACCATAAATTTAACCAAC 57.464 29.630 1.21 0.00 31.01 3.77
725 730 8.484008 CAACTTTGACCATAAATTTAACCAACG 58.516 33.333 1.21 5.06 0.00 4.10
726 731 7.942990 ACTTTGACCATAAATTTAACCAACGA 58.057 30.769 1.21 0.00 0.00 3.85
727 732 8.079809 ACTTTGACCATAAATTTAACCAACGAG 58.920 33.333 1.21 3.35 0.00 4.18
728 733 7.747155 TTGACCATAAATTTAACCAACGAGA 57.253 32.000 1.21 0.00 0.00 4.04
729 734 7.136289 TGACCATAAATTTAACCAACGAGAC 57.864 36.000 1.21 0.00 0.00 3.36
730 735 6.149807 TGACCATAAATTTAACCAACGAGACC 59.850 38.462 1.21 0.00 0.00 3.85
731 736 6.005198 ACCATAAATTTAACCAACGAGACCA 58.995 36.000 1.21 0.00 0.00 4.02
732 737 6.490721 ACCATAAATTTAACCAACGAGACCAA 59.509 34.615 1.21 0.00 0.00 3.67
733 738 6.804783 CCATAAATTTAACCAACGAGACCAAC 59.195 38.462 1.21 0.00 0.00 3.77
734 739 7.308951 CCATAAATTTAACCAACGAGACCAACT 60.309 37.037 1.21 0.00 0.00 3.16
735 740 8.723311 CATAAATTTAACCAACGAGACCAACTA 58.277 33.333 1.21 0.00 0.00 2.24
736 741 6.549912 AATTTAACCAACGAGACCAACTAC 57.450 37.500 0.00 0.00 0.00 2.73
737 742 4.669206 TTAACCAACGAGACCAACTACA 57.331 40.909 0.00 0.00 0.00 2.74
738 743 3.547054 AACCAACGAGACCAACTACAA 57.453 42.857 0.00 0.00 0.00 2.41
739 744 3.764237 ACCAACGAGACCAACTACAAT 57.236 42.857 0.00 0.00 0.00 2.71
740 745 4.081322 ACCAACGAGACCAACTACAATT 57.919 40.909 0.00 0.00 0.00 2.32
741 746 3.813166 ACCAACGAGACCAACTACAATTG 59.187 43.478 3.24 3.24 0.00 2.32
742 747 4.062293 CCAACGAGACCAACTACAATTGA 58.938 43.478 13.59 0.00 0.00 2.57
743 748 4.513692 CCAACGAGACCAACTACAATTGAA 59.486 41.667 13.59 0.00 0.00 2.69
744 749 5.334105 CCAACGAGACCAACTACAATTGAAG 60.334 44.000 13.59 0.00 0.00 3.02
745 750 5.209818 ACGAGACCAACTACAATTGAAGA 57.790 39.130 13.59 0.00 0.00 2.87
746 751 5.607477 ACGAGACCAACTACAATTGAAGAA 58.393 37.500 13.59 0.00 0.00 2.52
747 752 6.053005 ACGAGACCAACTACAATTGAAGAAA 58.947 36.000 13.59 0.00 0.00 2.52
748 753 6.540914 ACGAGACCAACTACAATTGAAGAAAA 59.459 34.615 13.59 0.00 0.00 2.29
749 754 7.066525 ACGAGACCAACTACAATTGAAGAAAAA 59.933 33.333 13.59 0.00 0.00 1.94
784 789 9.981114 AACTGGAAAATTCTTTCGAATACAAAT 57.019 25.926 0.00 0.00 41.70 2.32
785 790 9.981114 ACTGGAAAATTCTTTCGAATACAAATT 57.019 25.926 0.00 0.59 41.70 1.82
787 792 9.973450 TGGAAAATTCTTTCGAATACAAATTCA 57.027 25.926 0.00 0.00 41.70 2.57
808 813 9.965824 AATTCACTTATATAATTTTTGCTCCCG 57.034 29.630 0.00 0.00 0.00 5.14
809 814 6.966021 TCACTTATATAATTTTTGCTCCCGC 58.034 36.000 0.00 0.00 0.00 6.13
810 815 6.016610 TCACTTATATAATTTTTGCTCCCGCC 60.017 38.462 0.00 0.00 34.43 6.13
811 816 3.915437 ATATAATTTTTGCTCCCGCCG 57.085 42.857 0.00 0.00 34.43 6.46
812 817 0.102300 ATAATTTTTGCTCCCGCCGC 59.898 50.000 0.00 0.00 34.43 6.53
813 818 1.244697 TAATTTTTGCTCCCGCCGCA 61.245 50.000 0.00 0.00 35.22 5.69
814 819 2.093537 AATTTTTGCTCCCGCCGCAA 62.094 50.000 0.00 0.00 44.83 4.85
815 820 1.887344 ATTTTTGCTCCCGCCGCAAT 61.887 50.000 5.33 0.00 45.67 3.56
816 821 2.485188 TTTTTGCTCCCGCCGCAATC 62.485 55.000 5.33 0.00 45.67 2.67
832 837 5.712217 CGCAATCGGTCTTGATAGTTAAA 57.288 39.130 0.00 0.00 0.00 1.52
833 838 6.287107 CGCAATCGGTCTTGATAGTTAAAT 57.713 37.500 0.00 0.00 0.00 1.40
834 839 6.715464 CGCAATCGGTCTTGATAGTTAAATT 58.285 36.000 0.00 0.00 0.00 1.82
835 840 7.186804 CGCAATCGGTCTTGATAGTTAAATTT 58.813 34.615 0.00 0.00 0.00 1.82
836 841 8.332464 CGCAATCGGTCTTGATAGTTAAATTTA 58.668 33.333 0.00 0.00 0.00 1.40
837 842 9.434559 GCAATCGGTCTTGATAGTTAAATTTAC 57.565 33.333 0.00 0.00 0.00 2.01
838 843 9.632969 CAATCGGTCTTGATAGTTAAATTTACG 57.367 33.333 0.00 0.00 0.00 3.18
839 844 7.760131 TCGGTCTTGATAGTTAAATTTACGG 57.240 36.000 0.00 0.00 0.00 4.02
840 845 7.322664 TCGGTCTTGATAGTTAAATTTACGGT 58.677 34.615 0.00 0.00 0.00 4.83
841 846 7.489113 TCGGTCTTGATAGTTAAATTTACGGTC 59.511 37.037 0.00 0.00 0.00 4.79
842 847 7.276218 CGGTCTTGATAGTTAAATTTACGGTCA 59.724 37.037 0.00 0.00 0.00 4.02
843 848 8.938906 GGTCTTGATAGTTAAATTTACGGTCAA 58.061 33.333 0.00 6.02 0.00 3.18
852 857 7.646526 AGTTAAATTTACGGTCAAAGTTGAAGC 59.353 33.333 0.00 0.00 39.21 3.86
853 858 5.508200 AATTTACGGTCAAAGTTGAAGCA 57.492 34.783 0.00 0.00 39.21 3.91
854 859 5.705609 ATTTACGGTCAAAGTTGAAGCAT 57.294 34.783 0.00 0.00 39.21 3.79
855 860 6.811253 ATTTACGGTCAAAGTTGAAGCATA 57.189 33.333 0.00 0.00 39.21 3.14
856 861 5.856126 TTACGGTCAAAGTTGAAGCATAG 57.144 39.130 0.00 0.00 39.21 2.23
857 862 3.074412 ACGGTCAAAGTTGAAGCATAGG 58.926 45.455 0.00 0.00 39.21 2.57
858 863 3.244422 ACGGTCAAAGTTGAAGCATAGGA 60.244 43.478 0.00 0.00 39.21 2.94
859 864 3.751175 CGGTCAAAGTTGAAGCATAGGAA 59.249 43.478 0.00 0.00 39.21 3.36
860 865 4.396166 CGGTCAAAGTTGAAGCATAGGAAT 59.604 41.667 0.00 0.00 39.21 3.01
861 866 5.584649 CGGTCAAAGTTGAAGCATAGGAATA 59.415 40.000 0.00 0.00 39.21 1.75
862 867 6.238211 CGGTCAAAGTTGAAGCATAGGAATAG 60.238 42.308 0.00 0.00 39.21 1.73
863 868 6.823689 GGTCAAAGTTGAAGCATAGGAATAGA 59.176 38.462 0.00 0.00 39.21 1.98
864 869 7.011857 GGTCAAAGTTGAAGCATAGGAATAGAG 59.988 40.741 0.00 0.00 39.21 2.43
865 870 7.011857 GTCAAAGTTGAAGCATAGGAATAGAGG 59.988 40.741 0.00 0.00 39.21 3.69
866 871 6.814954 AAGTTGAAGCATAGGAATAGAGGA 57.185 37.500 0.00 0.00 0.00 3.71
867 872 6.814954 AGTTGAAGCATAGGAATAGAGGAA 57.185 37.500 0.00 0.00 0.00 3.36
868 873 6.825610 AGTTGAAGCATAGGAATAGAGGAAG 58.174 40.000 0.00 0.00 0.00 3.46
869 874 5.220710 TGAAGCATAGGAATAGAGGAAGC 57.779 43.478 0.00 0.00 0.00 3.86
870 875 4.655649 TGAAGCATAGGAATAGAGGAAGCA 59.344 41.667 0.00 0.00 0.00 3.91
871 876 4.615588 AGCATAGGAATAGAGGAAGCAC 57.384 45.455 0.00 0.00 0.00 4.40
872 877 4.230455 AGCATAGGAATAGAGGAAGCACT 58.770 43.478 0.00 0.00 0.00 4.40
873 878 5.398236 AGCATAGGAATAGAGGAAGCACTA 58.602 41.667 0.00 0.00 0.00 2.74
874 879 5.245075 AGCATAGGAATAGAGGAAGCACTAC 59.755 44.000 0.00 0.00 0.00 2.73
875 880 5.011125 GCATAGGAATAGAGGAAGCACTACA 59.989 44.000 0.00 0.00 0.00 2.74
876 881 6.295575 GCATAGGAATAGAGGAAGCACTACAT 60.296 42.308 0.00 0.00 0.00 2.29
877 882 7.675062 CATAGGAATAGAGGAAGCACTACATT 58.325 38.462 0.00 0.00 0.00 2.71
878 883 8.807118 CATAGGAATAGAGGAAGCACTACATTA 58.193 37.037 0.00 0.00 0.00 1.90
879 884 7.863901 AGGAATAGAGGAAGCACTACATTAT 57.136 36.000 0.00 0.00 0.00 1.28
880 885 7.675062 AGGAATAGAGGAAGCACTACATTATG 58.325 38.462 0.00 0.00 0.00 1.90
881 886 7.510685 AGGAATAGAGGAAGCACTACATTATGA 59.489 37.037 0.00 0.00 0.00 2.15
882 887 8.150945 GGAATAGAGGAAGCACTACATTATGAA 58.849 37.037 0.00 0.00 0.00 2.57
883 888 9.547753 GAATAGAGGAAGCACTACATTATGAAA 57.452 33.333 0.00 0.00 0.00 2.69
885 890 7.798596 AGAGGAAGCACTACATTATGAAATG 57.201 36.000 0.00 0.00 46.66 2.32
886 891 6.769822 AGAGGAAGCACTACATTATGAAATGG 59.230 38.462 0.00 0.00 45.72 3.16
887 892 6.662755 AGGAAGCACTACATTATGAAATGGA 58.337 36.000 0.00 0.00 45.72 3.41
970 976 1.679680 CAAGAGCCCAGCCATTGTATG 59.320 52.381 0.00 0.00 0.00 2.39
973 979 2.713167 AGAGCCCAGCCATTGTATGTAT 59.287 45.455 0.00 0.00 0.00 2.29
974 980 3.909995 AGAGCCCAGCCATTGTATGTATA 59.090 43.478 0.00 0.00 0.00 1.47
975 981 4.537688 AGAGCCCAGCCATTGTATGTATAT 59.462 41.667 0.00 0.00 0.00 0.86
976 982 5.726308 AGAGCCCAGCCATTGTATGTATATA 59.274 40.000 0.00 0.00 0.00 0.86
978 984 6.180472 AGCCCAGCCATTGTATGTATATAAC 58.820 40.000 0.00 0.00 0.00 1.89
981 987 6.480763 CCAGCCATTGTATGTATATAACCCA 58.519 40.000 0.00 0.00 0.00 4.51
982 988 6.945435 CCAGCCATTGTATGTATATAACCCAA 59.055 38.462 0.00 0.00 0.00 4.12
983 989 7.094377 CCAGCCATTGTATGTATATAACCCAAC 60.094 40.741 0.00 0.00 0.00 3.77
985 991 6.152154 GCCATTGTATGTATATAACCCAACCC 59.848 42.308 0.00 0.00 0.00 4.11
986 992 7.466804 CCATTGTATGTATATAACCCAACCCT 58.533 38.462 0.00 0.00 0.00 4.34
1300 1312 2.430582 CGAACGCGGGTACGGAAA 60.431 61.111 12.47 0.00 41.36 3.13
1301 1313 2.021039 CGAACGCGGGTACGGAAAA 61.021 57.895 12.47 0.00 41.36 2.29
1302 1314 1.492873 GAACGCGGGTACGGAAAAC 59.507 57.895 12.47 0.00 41.36 2.43
1303 1315 1.900585 GAACGCGGGTACGGAAAACC 61.901 60.000 12.47 0.00 41.36 3.27
1308 1320 4.604114 GGTACGGAAAACCCTCGG 57.396 61.111 0.00 0.00 0.00 4.63
1314 1326 0.248289 CGGAAAACCCTCGGCTCTTA 59.752 55.000 0.00 0.00 0.00 2.10
1317 1329 2.290134 GGAAAACCCTCGGCTCTTACTT 60.290 50.000 0.00 0.00 0.00 2.24
1322 1334 1.480954 CCCTCGGCTCTTACTTAGCAA 59.519 52.381 0.00 0.00 41.93 3.91
1325 1337 1.134788 TCGGCTCTTACTTAGCAAGGC 60.135 52.381 0.00 0.00 41.93 4.35
1329 1341 2.939756 GCTCTTACTTAGCAAGGCCTTC 59.060 50.000 17.29 10.91 39.83 3.46
1340 1352 3.660343 AGGCCTTCCTTGCTTCTTC 57.340 52.632 0.00 0.00 40.66 2.87
1342 1354 1.308783 GGCCTTCCTTGCTTCTTCGG 61.309 60.000 0.00 0.00 0.00 4.30
1345 1357 1.807142 CCTTCCTTGCTTCTTCGGTTC 59.193 52.381 0.00 0.00 0.00 3.62
1348 1360 1.160137 CCTTGCTTCTTCGGTTCTGG 58.840 55.000 0.00 0.00 0.00 3.86
1352 1364 1.416401 TGCTTCTTCGGTTCTGGTTCT 59.584 47.619 0.00 0.00 0.00 3.01
1355 1367 3.058846 GCTTCTTCGGTTCTGGTTCTTTC 60.059 47.826 0.00 0.00 0.00 2.62
1357 1369 3.728845 TCTTCGGTTCTGGTTCTTTCTG 58.271 45.455 0.00 0.00 0.00 3.02
1358 1370 2.543777 TCGGTTCTGGTTCTTTCTGG 57.456 50.000 0.00 0.00 0.00 3.86
1360 1372 2.143925 CGGTTCTGGTTCTTTCTGGTC 58.856 52.381 0.00 0.00 0.00 4.02
1362 1374 3.142174 GGTTCTGGTTCTTTCTGGTCTG 58.858 50.000 0.00 0.00 0.00 3.51
1363 1375 3.142174 GTTCTGGTTCTTTCTGGTCTGG 58.858 50.000 0.00 0.00 0.00 3.86
1368 1400 0.685097 TTCTTTCTGGTCTGGGGACG 59.315 55.000 0.00 0.00 42.97 4.79
1373 1405 3.302347 CTGGTCTGGGGACGAGTGC 62.302 68.421 0.00 0.00 41.38 4.40
1391 1423 4.338879 AGTGCCTGATATTCTTGCTTGTT 58.661 39.130 0.00 0.00 0.00 2.83
1470 1502 2.279784 GAAGATCCGCTCCAGCCG 60.280 66.667 0.00 0.00 37.91 5.52
1497 1529 6.238703 GGGTAGAGTAAGTTCTACTTGATCCG 60.239 46.154 11.62 0.00 45.67 4.18
1512 1544 0.252742 ATCCGTCCTCCCCTTTCTGT 60.253 55.000 0.00 0.00 0.00 3.41
1513 1545 0.410663 TCCGTCCTCCCCTTTCTGTA 59.589 55.000 0.00 0.00 0.00 2.74
1525 1557 4.218417 CCCCTTTCTGTACATGGTTTCTTG 59.782 45.833 0.00 0.00 0.00 3.02
1531 1563 4.042809 TCTGTACATGGTTTCTTGGATGGT 59.957 41.667 0.00 0.00 0.00 3.55
1540 1572 6.177610 TGGTTTCTTGGATGGTACTAATCAC 58.822 40.000 10.10 2.79 0.00 3.06
1541 1573 6.177610 GGTTTCTTGGATGGTACTAATCACA 58.822 40.000 10.10 4.70 0.00 3.58
1548 1585 6.370453 TGGATGGTACTAATCACACTAGCTA 58.630 40.000 10.10 0.00 0.00 3.32
1553 1590 6.320672 TGGTACTAATCACACTAGCTAGAACC 59.679 42.308 27.45 15.60 0.00 3.62
1569 1607 3.924576 ACCTGGAGTGCAAAGGTTT 57.075 47.368 0.00 0.00 41.65 3.27
1589 1627 5.529060 GGTTTCTCCTTGCATCGATTTCTAT 59.471 40.000 0.00 0.00 0.00 1.98
1591 1629 7.095439 GGTTTCTCCTTGCATCGATTTCTATAG 60.095 40.741 0.00 0.00 0.00 1.31
1596 1634 4.871933 TGCATCGATTTCTATAGGCTCA 57.128 40.909 0.00 0.00 0.00 4.26
1618 1669 3.259425 CTCACCGCTTTGCCTGTGC 62.259 63.158 0.00 0.00 38.26 4.57
1638 1689 0.179119 GCAGCTGCATCAAATGGGTC 60.179 55.000 33.36 0.00 41.59 4.46
1650 1701 1.064825 AATGGGTCCAGGAGTCGTTT 58.935 50.000 0.00 0.00 0.00 3.60
1710 1761 4.374702 CAGTGCGTGCGTGCCTTC 62.375 66.667 0.00 0.00 0.00 3.46
2052 2103 5.221224 TGGCACTTCTATGTTTCAAAGGTTG 60.221 40.000 0.00 0.00 0.00 3.77
2064 2115 2.703007 TCAAAGGTTGTTGGATTTGGGG 59.297 45.455 0.00 0.00 34.25 4.96
2197 2248 6.377429 TCTGAGAGTGTCGGTGTAGATATTTT 59.623 38.462 0.00 0.00 32.66 1.82
2292 2343 3.990469 GGTCTAGATCGTATGCACCATTG 59.010 47.826 0.00 0.00 0.00 2.82
2305 2356 3.287312 CACCATTGCACACTTTACCTG 57.713 47.619 0.00 0.00 0.00 4.00
2315 2366 4.632153 CACACTTTACCTGCAGAGTACTT 58.368 43.478 17.39 0.23 0.00 2.24
2316 2367 4.449068 CACACTTTACCTGCAGAGTACTTG 59.551 45.833 17.39 13.29 0.00 3.16
2503 2554 6.183360 GGAAACTACATACAGGGCATTTCTTC 60.183 42.308 0.00 0.00 0.00 2.87
2552 2603 3.689347 AGGTGCTCTATTTGTGATTGCA 58.311 40.909 0.00 0.00 0.00 4.08
2553 2604 3.693085 AGGTGCTCTATTTGTGATTGCAG 59.307 43.478 0.00 0.00 0.00 4.41
2558 2609 3.282021 TCTATTTGTGATTGCAGCCTCC 58.718 45.455 0.00 0.00 0.00 4.30
2605 2659 9.554724 TTTGTTGAATCGTTTATTATCTCTTGC 57.445 29.630 0.00 0.00 0.00 4.01
2654 2708 1.357907 CCCGTACGCAAATTCGGTAA 58.642 50.000 10.49 0.00 41.17 2.85
2687 2741 3.739300 CGTGGTGAAACTAGTAAGTGTGG 59.261 47.826 0.00 0.00 35.62 4.17
2823 2877 1.911057 AGGGTAAAGCTGCAAAGGTC 58.089 50.000 1.02 0.00 0.00 3.85
2890 2944 4.065789 GAGGGTTTCTTGACTAACACTGG 58.934 47.826 0.00 0.00 38.09 4.00
2907 2961 3.255395 CACTGGTTGTATTGGCACATTCA 59.745 43.478 0.00 0.00 39.30 2.57
3159 3217 5.382618 TTTTCTGAAGGACGGACTACTAC 57.617 43.478 0.00 0.00 33.15 2.73
3213 3271 4.016444 AGAGAGACTGTCATGTCCTCTTC 58.984 47.826 10.88 0.00 39.36 2.87
3320 3378 3.582647 TGTCAGCTCCATTGAGGTCTTTA 59.417 43.478 0.00 0.00 46.08 1.85
3421 3480 6.555812 AGTGTTTCTAAATTCCCTTTCGAC 57.444 37.500 0.00 0.00 0.00 4.20
3531 3590 9.760077 CCTTAAGAAGTAAGAACAGTTTACTGA 57.240 33.333 16.31 0.00 42.71 3.41
3537 3596 5.701290 AGTAAGAACAGTTTACTGATGCACC 59.299 40.000 16.31 0.00 46.59 5.01
3540 3599 4.757149 AGAACAGTTTACTGATGCACCTTC 59.243 41.667 16.31 7.71 46.59 3.46
3553 3612 2.290641 TGCACCTTCCGTTTCCACATAT 60.291 45.455 0.00 0.00 0.00 1.78
3565 3624 8.455682 TCCGTTTCCACATATTATGTTTTCTTC 58.544 33.333 6.58 0.00 42.70 2.87
3567 3626 9.490663 CGTTTCCACATATTATGTTTTCTTCTC 57.509 33.333 6.58 0.00 42.70 2.87
3581 3640 8.066612 TGTTTTCTTCTCTCAATTTTTGACCT 57.933 30.769 0.00 0.00 35.46 3.85
3582 3641 7.975616 TGTTTTCTTCTCTCAATTTTTGACCTG 59.024 33.333 0.00 0.00 35.46 4.00
3607 3669 6.451064 CTGTTTTCTTTGTACAGGGAAACT 57.549 37.500 23.27 0.00 36.50 2.66
3625 3687 6.382608 GGAAACTGAATTGCTTAAGGAGAAC 58.617 40.000 4.29 0.00 0.00 3.01
3670 3732 6.986817 TGAGCAGCCTTAGATAATTAACAGTC 59.013 38.462 0.00 0.00 0.00 3.51
3674 3736 9.442047 GCAGCCTTAGATAATTAACAGTCATAT 57.558 33.333 0.00 0.00 0.00 1.78
3706 3768 3.988379 TGTTGTTTGAATCTGTGCCTC 57.012 42.857 0.00 0.00 0.00 4.70
3746 3808 9.123709 CTTTAGACTCTAAAGCTTATAGATGCG 57.876 37.037 20.67 8.92 0.00 4.73
3779 3845 3.159213 AGGCTTGATTGTTGTGATCCA 57.841 42.857 0.00 0.00 0.00 3.41
3829 3895 6.425210 TCATCGAGGTGAGGATTGAATAAT 57.575 37.500 0.00 0.00 31.23 1.28
3830 3896 6.830912 TCATCGAGGTGAGGATTGAATAATT 58.169 36.000 0.00 0.00 31.23 1.40
3832 3898 7.775093 TCATCGAGGTGAGGATTGAATAATTTT 59.225 33.333 0.00 0.00 31.23 1.82
3834 3900 7.985476 TCGAGGTGAGGATTGAATAATTTTTC 58.015 34.615 2.03 2.03 0.00 2.29
3836 3902 7.100458 AGGTGAGGATTGAATAATTTTTCCG 57.900 36.000 6.23 0.00 0.00 4.30
3837 3903 6.663523 AGGTGAGGATTGAATAATTTTTCCGT 59.336 34.615 6.23 0.00 0.00 4.69
3841 3907 9.202273 TGAGGATTGAATAATTTTTCCGTTTTG 57.798 29.630 6.23 0.00 0.00 2.44
3851 3986 7.428282 AATTTTTCCGTTTTGTCACAAAGTT 57.572 28.000 2.58 0.00 0.00 2.66
3935 4070 4.320910 TCGATGTCGAGACAGCCT 57.679 55.556 14.73 0.00 44.19 4.58
3973 4109 7.603784 AGCAAATAAAGAACCTTAAAGGCATTG 59.396 33.333 0.00 0.00 39.63 2.82
4028 4165 4.103365 ACAAAACGTGACTTGATGCAAA 57.897 36.364 11.11 0.00 0.00 3.68
4072 4209 6.757897 TCAAGTATTTTAGTCATGGCAAGG 57.242 37.500 0.00 0.00 0.00 3.61
4074 4211 6.374333 TCAAGTATTTTAGTCATGGCAAGGTC 59.626 38.462 0.00 0.00 0.00 3.85
4080 4217 1.077663 AGTCATGGCAAGGTCCCATTT 59.922 47.619 0.00 0.00 41.02 2.32
4096 4233 0.108992 ATTTGCAACAGCTCGCATGG 60.109 50.000 0.00 0.00 38.10 3.66
4097 4234 1.454572 TTTGCAACAGCTCGCATGGT 61.455 50.000 0.00 0.00 38.10 3.55
4098 4235 1.454572 TTGCAACAGCTCGCATGGTT 61.455 50.000 0.00 0.00 38.10 3.67
4100 4237 1.005294 GCAACAGCTCGCATGGTTTG 61.005 55.000 0.00 0.00 0.00 2.93
4112 4264 3.308438 CATGGTTTGCTCCTGGAAAAG 57.692 47.619 0.00 0.00 35.36 2.27
4117 4269 2.825532 GTTTGCTCCTGGAAAAGGCATA 59.174 45.455 8.90 2.55 46.92 3.14
4124 4276 5.105187 GCTCCTGGAAAAGGCATAATTTTCT 60.105 40.000 0.00 0.00 46.92 2.52
4137 4289 6.294955 GGCATAATTTTCTTCCATGGATCTCC 60.295 42.308 17.06 0.75 0.00 3.71
4212 4370 0.037605 AGAAGGCGACGAAACCGAAT 60.038 50.000 0.00 0.00 0.00 3.34
4214 4372 1.349259 AAGGCGACGAAACCGAATCG 61.349 55.000 0.00 0.00 45.47 3.34
4219 4377 1.513178 CGACGAAACCGAATCGATCAG 59.487 52.381 3.36 0.00 42.76 2.90
4293 4467 0.042188 CGTGTCAAAACTCACAGGCG 60.042 55.000 0.00 0.00 34.66 5.52
4294 4468 0.317020 GTGTCAAAACTCACAGGCGC 60.317 55.000 0.00 0.00 35.04 6.53
4295 4469 1.082756 GTCAAAACTCACAGGCGCG 60.083 57.895 0.00 0.00 0.00 6.86
4296 4470 1.522806 TCAAAACTCACAGGCGCGT 60.523 52.632 8.43 0.00 0.00 6.01
4297 4471 1.369209 CAAAACTCACAGGCGCGTG 60.369 57.895 27.18 27.18 38.29 5.34
4298 4472 1.817941 AAAACTCACAGGCGCGTGT 60.818 52.632 28.63 28.63 38.12 4.49
4313 4487 0.734889 CGTGTGCCCTCCATGATTTC 59.265 55.000 0.00 0.00 0.00 2.17
4336 4518 2.107151 TAATTTGTGTGCGTGCGCGT 62.107 50.000 22.18 0.00 45.51 6.01
4349 4531 1.722163 GCGCGTGTGTGTGATTGTG 60.722 57.895 8.43 0.00 0.00 3.33
4357 4539 4.527564 GTGTGTGTGATTGTGCTCTTAAC 58.472 43.478 0.00 0.00 0.00 2.01
4367 4549 7.584123 GTGATTGTGCTCTTAACGCTATTATTG 59.416 37.037 0.00 0.00 0.00 1.90
4369 4551 8.657074 ATTGTGCTCTTAACGCTATTATTGTA 57.343 30.769 0.00 0.00 0.00 2.41
4370 4552 7.459394 TGTGCTCTTAACGCTATTATTGTAC 57.541 36.000 0.00 0.00 0.00 2.90
4371 4553 7.262772 TGTGCTCTTAACGCTATTATTGTACT 58.737 34.615 0.00 0.00 0.00 2.73
4372 4554 7.434307 TGTGCTCTTAACGCTATTATTGTACTC 59.566 37.037 0.00 0.00 0.00 2.59
4373 4555 6.921857 TGCTCTTAACGCTATTATTGTACTCC 59.078 38.462 0.00 0.00 0.00 3.85
4374 4556 6.365518 GCTCTTAACGCTATTATTGTACTCCC 59.634 42.308 0.00 0.00 0.00 4.30
4375 4557 7.592885 TCTTAACGCTATTATTGTACTCCCT 57.407 36.000 0.00 0.00 0.00 4.20
4376 4558 7.655490 TCTTAACGCTATTATTGTACTCCCTC 58.345 38.462 0.00 0.00 0.00 4.30
4377 4559 4.868314 ACGCTATTATTGTACTCCCTCC 57.132 45.455 0.00 0.00 0.00 4.30
4378 4560 3.255149 ACGCTATTATTGTACTCCCTCCG 59.745 47.826 0.00 0.00 0.00 4.63
4379 4561 3.255149 CGCTATTATTGTACTCCCTCCGT 59.745 47.826 0.00 0.00 0.00 4.69
4380 4562 4.261909 CGCTATTATTGTACTCCCTCCGTT 60.262 45.833 0.00 0.00 0.00 4.44
4381 4563 5.228665 GCTATTATTGTACTCCCTCCGTTC 58.771 45.833 0.00 0.00 0.00 3.95
4382 4564 4.684484 ATTATTGTACTCCCTCCGTTCC 57.316 45.455 0.00 0.00 0.00 3.62
4383 4565 1.946984 ATTGTACTCCCTCCGTTCCA 58.053 50.000 0.00 0.00 0.00 3.53
4384 4566 1.719529 TTGTACTCCCTCCGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
4385 4567 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
4386 4568 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
4387 4569 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
4388 4570 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
4389 4571 3.345508 ACTCCCTCCGTTCCAAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
4390 4572 2.910977 ACTCCCTCCGTTCCAAAATACT 59.089 45.455 0.00 0.00 0.00 2.12
4391 4573 3.329814 ACTCCCTCCGTTCCAAAATACTT 59.670 43.478 0.00 0.00 0.00 2.24
4392 4574 3.681593 TCCCTCCGTTCCAAAATACTTG 58.318 45.455 0.00 0.00 0.00 3.16
4393 4575 3.073356 TCCCTCCGTTCCAAAATACTTGT 59.927 43.478 0.00 0.00 0.00 3.16
4394 4576 3.439129 CCCTCCGTTCCAAAATACTTGTC 59.561 47.826 0.00 0.00 0.00 3.18
4395 4577 3.124636 CCTCCGTTCCAAAATACTTGTCG 59.875 47.826 0.00 0.00 0.00 4.35
4396 4578 3.731089 TCCGTTCCAAAATACTTGTCGT 58.269 40.909 0.00 0.00 0.00 4.34
4397 4579 3.495377 TCCGTTCCAAAATACTTGTCGTG 59.505 43.478 0.00 0.00 0.00 4.35
4398 4580 3.364565 CCGTTCCAAAATACTTGTCGTGG 60.365 47.826 0.00 0.00 0.00 4.94
4399 4581 3.249080 CGTTCCAAAATACTTGTCGTGGT 59.751 43.478 0.00 0.00 0.00 4.16
4416 4600 3.526534 GTGGTTACTCTCCATCTTGCTC 58.473 50.000 0.00 0.00 37.30 4.26
4426 4616 7.044798 ACTCTCCATCTTGCTCAATTAACTAC 58.955 38.462 0.00 0.00 0.00 2.73
4427 4617 7.093112 ACTCTCCATCTTGCTCAATTAACTACT 60.093 37.037 0.00 0.00 0.00 2.57
4428 4618 7.268586 TCTCCATCTTGCTCAATTAACTACTC 58.731 38.462 0.00 0.00 0.00 2.59
4429 4619 6.349300 TCCATCTTGCTCAATTAACTACTCC 58.651 40.000 0.00 0.00 0.00 3.85
4430 4620 6.156949 TCCATCTTGCTCAATTAACTACTCCT 59.843 38.462 0.00 0.00 0.00 3.69
4431 4621 6.825721 CCATCTTGCTCAATTAACTACTCCTT 59.174 38.462 0.00 0.00 0.00 3.36
4432 4622 7.337942 CCATCTTGCTCAATTAACTACTCCTTT 59.662 37.037 0.00 0.00 0.00 3.11
4433 4623 8.734386 CATCTTGCTCAATTAACTACTCCTTTT 58.266 33.333 0.00 0.00 0.00 2.27
4434 4624 8.099364 TCTTGCTCAATTAACTACTCCTTTTG 57.901 34.615 0.00 0.00 0.00 2.44
4435 4625 7.719633 TCTTGCTCAATTAACTACTCCTTTTGT 59.280 33.333 0.00 0.00 0.00 2.83
4436 4626 7.817418 TGCTCAATTAACTACTCCTTTTGTT 57.183 32.000 0.00 0.00 0.00 2.83
4437 4627 8.232913 TGCTCAATTAACTACTCCTTTTGTTT 57.767 30.769 0.00 0.00 0.00 2.83
4438 4628 8.349983 TGCTCAATTAACTACTCCTTTTGTTTC 58.650 33.333 0.00 0.00 0.00 2.78
4439 4629 8.568794 GCTCAATTAACTACTCCTTTTGTTTCT 58.431 33.333 0.00 0.00 0.00 2.52
4448 4638 9.682465 ACTACTCCTTTTGTTTCTTTTTAGTCT 57.318 29.630 0.00 0.00 0.00 3.24
4449 4639 9.937175 CTACTCCTTTTGTTTCTTTTTAGTCTG 57.063 33.333 0.00 0.00 0.00 3.51
4450 4640 7.258441 ACTCCTTTTGTTTCTTTTTAGTCTGC 58.742 34.615 0.00 0.00 0.00 4.26
4451 4641 7.093945 ACTCCTTTTGTTTCTTTTTAGTCTGCA 60.094 33.333 0.00 0.00 0.00 4.41
4452 4642 7.781056 TCCTTTTGTTTCTTTTTAGTCTGCAT 58.219 30.769 0.00 0.00 0.00 3.96
4453 4643 7.706179 TCCTTTTGTTTCTTTTTAGTCTGCATG 59.294 33.333 0.00 0.00 0.00 4.06
4454 4644 7.492344 CCTTTTGTTTCTTTTTAGTCTGCATGT 59.508 33.333 0.00 0.00 0.00 3.21
4455 4645 9.515020 CTTTTGTTTCTTTTTAGTCTGCATGTA 57.485 29.630 0.00 0.00 0.00 2.29
4456 4646 9.862371 TTTTGTTTCTTTTTAGTCTGCATGTAA 57.138 25.926 0.00 0.00 0.00 2.41
4457 4647 9.515020 TTTGTTTCTTTTTAGTCTGCATGTAAG 57.485 29.630 0.00 0.00 0.00 2.34
4458 4648 8.445275 TGTTTCTTTTTAGTCTGCATGTAAGA 57.555 30.769 0.00 0.00 0.00 2.10
4459 4649 9.066892 TGTTTCTTTTTAGTCTGCATGTAAGAT 57.933 29.630 3.92 0.00 0.00 2.40
4460 4650 9.899226 GTTTCTTTTTAGTCTGCATGTAAGATT 57.101 29.630 3.92 2.99 0.00 2.40
4462 4652 9.897744 TTCTTTTTAGTCTGCATGTAAGATTTG 57.102 29.630 3.92 0.00 0.00 2.32
4463 4653 9.283768 TCTTTTTAGTCTGCATGTAAGATTTGA 57.716 29.630 3.92 0.00 0.00 2.69
4466 4656 8.791327 TTTAGTCTGCATGTAAGATTTGATCA 57.209 30.769 0.00 0.00 0.00 2.92
4467 4657 8.791327 TTAGTCTGCATGTAAGATTTGATCAA 57.209 30.769 3.38 3.38 0.00 2.57
4468 4658 7.692460 AGTCTGCATGTAAGATTTGATCAAA 57.308 32.000 22.52 22.52 34.46 2.69
4469 4659 7.759465 AGTCTGCATGTAAGATTTGATCAAAG 58.241 34.615 24.17 10.49 33.32 2.77
4470 4660 7.392673 AGTCTGCATGTAAGATTTGATCAAAGT 59.607 33.333 24.17 14.86 33.32 2.66
4471 4661 7.695618 GTCTGCATGTAAGATTTGATCAAAGTC 59.304 37.037 24.17 19.70 33.32 3.01
4472 4662 7.391275 TCTGCATGTAAGATTTGATCAAAGTCA 59.609 33.333 24.17 17.27 33.32 3.41
4473 4663 7.884257 TGCATGTAAGATTTGATCAAAGTCAA 58.116 30.769 24.17 9.03 36.38 3.18
4590 4780 8.705594 ACCATATAGCTTTAGTGTTGTAGATGT 58.294 33.333 0.00 0.00 0.00 3.06
4591 4781 9.547753 CCATATAGCTTTAGTGTTGTAGATGTT 57.452 33.333 0.00 0.00 0.00 2.71
4705 4895 9.688592 ATGCAGACTAAAAAGAAATGAAGAAAG 57.311 29.630 0.00 0.00 0.00 2.62
4706 4896 8.686334 TGCAGACTAAAAAGAAATGAAGAAAGT 58.314 29.630 0.00 0.00 0.00 2.66
4729 4919 4.323417 AGTATCAAGCATGAACGAAACCA 58.677 39.130 0.00 0.00 39.49 3.67
4784 4992 0.726827 CGGTGCAATCTACAACGCAT 59.273 50.000 0.00 0.00 41.89 4.73
4834 5043 1.426621 GCACAGCATGACATGACGG 59.573 57.895 19.76 12.72 39.69 4.79
4871 5080 0.038166 AGGATGGCGCCAAGAGAAAA 59.962 50.000 36.33 7.40 0.00 2.29
4885 5094 3.077359 AGAGAAAATTTCCAGGCGAGTG 58.923 45.455 1.57 0.00 0.00 3.51
4895 5104 1.164411 CAGGCGAGTGGTTTATGCAA 58.836 50.000 0.00 0.00 0.00 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.405831 GTTTACTACCCCAACTCCACAC 58.594 50.000 0.00 0.00 0.00 3.82
33 34 2.969821 TGTGCCCTTTAAGGTCATGT 57.030 45.000 10.40 0.00 31.93 3.21
43 44 8.791675 CCACATTTTTATTTAATTGTGCCCTTT 58.208 29.630 0.00 0.00 37.74 3.11
44 45 8.160106 TCCACATTTTTATTTAATTGTGCCCTT 58.840 29.630 0.00 0.00 37.74 3.95
59 60 4.902443 TTTCGTGCACTCCACATTTTTA 57.098 36.364 16.19 0.00 44.91 1.52
72 73 6.962116 CGTACCAAATGTATTTATTTCGTGCA 59.038 34.615 0.00 0.00 28.56 4.57
73 74 6.412653 CCGTACCAAATGTATTTATTTCGTGC 59.587 38.462 0.00 0.00 0.00 5.34
93 94 4.750098 CCATGTCCATGTCTTAATCCGTAC 59.250 45.833 6.53 0.00 37.11 3.67
103 104 1.888512 GTGCAAACCATGTCCATGTCT 59.111 47.619 6.53 0.00 37.11 3.41
126 131 5.846994 CGTACAAGAGACTATAGAATCGTGC 59.153 44.000 6.78 2.02 0.00 5.34
129 134 7.408123 ACAACGTACAAGAGACTATAGAATCG 58.592 38.462 6.78 1.33 0.00 3.34
138 143 3.136763 TCGAGACAACGTACAAGAGACT 58.863 45.455 0.00 0.00 34.70 3.24
182 187 6.238103 CCACTTGCATCCTTAGTTATAACACG 60.238 42.308 17.65 5.31 0.00 4.49
205 210 1.764854 GGGGATAAGCGGGACTCCA 60.765 63.158 0.00 0.00 0.00 3.86
214 219 9.232473 CTAATTATCTGGTTTAAGGGGATAAGC 57.768 37.037 0.00 0.00 34.03 3.09
234 239 5.258841 TCTCGGTCAGAGGTGAACTAATTA 58.741 41.667 0.00 0.00 46.82 1.40
292 297 8.845227 TGCATGTTGAGAAAAATAGTTTAGTGA 58.155 29.630 0.00 0.00 0.00 3.41
387 392 1.603802 ACGAGCAACACACAATTGAGG 59.396 47.619 13.59 6.39 0.00 3.86
393 398 1.885388 CCGGACGAGCAACACACAA 60.885 57.895 0.00 0.00 0.00 3.33
437 442 4.214986 TCCGAATGGTAATCAAAGCTCA 57.785 40.909 0.00 0.00 36.30 4.26
459 464 5.779771 AGCAAACATATTTTTCAAGAGGGGA 59.220 36.000 0.00 0.00 0.00 4.81
471 476 4.036027 CGCATCCTCAGAGCAAACATATTT 59.964 41.667 0.00 0.00 0.00 1.40
508 513 5.634439 TGTTCATTTCAATGATTTTCTGGCG 59.366 36.000 3.06 0.00 44.27 5.69
509 514 6.647895 AGTGTTCATTTCAATGATTTTCTGGC 59.352 34.615 3.06 0.00 44.27 4.85
608 613 8.808092 TCAAAAACAGTATTATCCCCGAAAATT 58.192 29.630 0.00 0.00 0.00 1.82
609 614 8.356000 TCAAAAACAGTATTATCCCCGAAAAT 57.644 30.769 0.00 0.00 0.00 1.82
610 615 7.762588 TCAAAAACAGTATTATCCCCGAAAA 57.237 32.000 0.00 0.00 0.00 2.29
611 616 7.762588 TTCAAAAACAGTATTATCCCCGAAA 57.237 32.000 0.00 0.00 0.00 3.46
612 617 7.629652 GCATTCAAAAACAGTATTATCCCCGAA 60.630 37.037 0.00 0.00 0.00 4.30
613 618 6.183360 GCATTCAAAAACAGTATTATCCCCGA 60.183 38.462 0.00 0.00 0.00 5.14
614 619 5.977129 GCATTCAAAAACAGTATTATCCCCG 59.023 40.000 0.00 0.00 0.00 5.73
615 620 6.872920 TGCATTCAAAAACAGTATTATCCCC 58.127 36.000 0.00 0.00 0.00 4.81
616 621 8.196771 TCATGCATTCAAAAACAGTATTATCCC 58.803 33.333 0.00 0.00 0.00 3.85
617 622 9.585099 TTCATGCATTCAAAAACAGTATTATCC 57.415 29.630 0.00 0.00 0.00 2.59
621 626 9.199982 CTTCTTCATGCATTCAAAAACAGTATT 57.800 29.630 0.00 0.00 0.00 1.89
622 627 8.579006 TCTTCTTCATGCATTCAAAAACAGTAT 58.421 29.630 0.00 0.00 0.00 2.12
623 628 7.939782 TCTTCTTCATGCATTCAAAAACAGTA 58.060 30.769 0.00 0.00 0.00 2.74
624 629 6.808829 TCTTCTTCATGCATTCAAAAACAGT 58.191 32.000 0.00 0.00 0.00 3.55
625 630 7.703298 TTCTTCTTCATGCATTCAAAAACAG 57.297 32.000 0.00 0.00 0.00 3.16
626 631 7.927092 TGATTCTTCTTCATGCATTCAAAAACA 59.073 29.630 0.00 0.00 0.00 2.83
627 632 8.301730 TGATTCTTCTTCATGCATTCAAAAAC 57.698 30.769 0.00 0.00 0.00 2.43
629 634 9.577110 GTATGATTCTTCTTCATGCATTCAAAA 57.423 29.630 0.00 0.00 36.55 2.44
630 635 8.963725 AGTATGATTCTTCTTCATGCATTCAAA 58.036 29.630 0.00 0.00 38.29 2.69
631 636 8.515695 AGTATGATTCTTCTTCATGCATTCAA 57.484 30.769 0.00 0.00 38.29 2.69
632 637 7.228108 GGAGTATGATTCTTCTTCATGCATTCA 59.772 37.037 0.00 0.00 38.29 2.57
633 638 7.308469 GGGAGTATGATTCTTCTTCATGCATTC 60.308 40.741 0.00 0.00 38.29 2.67
634 639 6.489361 GGGAGTATGATTCTTCTTCATGCATT 59.511 38.462 0.00 0.00 38.29 3.56
635 640 6.002704 GGGAGTATGATTCTTCTTCATGCAT 58.997 40.000 0.00 0.00 38.29 3.96
636 641 5.131642 AGGGAGTATGATTCTTCTTCATGCA 59.868 40.000 0.00 0.00 38.29 3.96
637 642 5.619220 AGGGAGTATGATTCTTCTTCATGC 58.381 41.667 0.00 0.00 36.72 4.06
638 643 7.278135 TGAAGGGAGTATGATTCTTCTTCATG 58.722 38.462 11.57 0.00 35.50 3.07
639 644 7.443302 TGAAGGGAGTATGATTCTTCTTCAT 57.557 36.000 11.57 0.00 37.56 2.57
640 645 6.874278 TGAAGGGAGTATGATTCTTCTTCA 57.126 37.500 11.57 11.57 35.98 3.02
641 646 7.443879 GGAATGAAGGGAGTATGATTCTTCTTC 59.556 40.741 0.00 8.20 35.98 2.87
642 647 7.092264 TGGAATGAAGGGAGTATGATTCTTCTT 60.092 37.037 0.00 0.00 35.98 2.52
643 648 6.388100 TGGAATGAAGGGAGTATGATTCTTCT 59.612 38.462 0.00 0.00 35.98 2.85
644 649 6.595682 TGGAATGAAGGGAGTATGATTCTTC 58.404 40.000 0.00 0.00 35.65 2.87
645 650 6.581388 TGGAATGAAGGGAGTATGATTCTT 57.419 37.500 0.00 0.00 0.00 2.52
646 651 6.581388 TTGGAATGAAGGGAGTATGATTCT 57.419 37.500 0.00 0.00 0.00 2.40
647 652 7.645058 TTTTGGAATGAAGGGAGTATGATTC 57.355 36.000 0.00 0.00 0.00 2.52
648 653 9.887862 ATATTTTGGAATGAAGGGAGTATGATT 57.112 29.630 0.00 0.00 0.00 2.57
651 656 9.799106 ACTATATTTTGGAATGAAGGGAGTATG 57.201 33.333 0.00 0.00 0.00 2.39
652 657 9.799106 CACTATATTTTGGAATGAAGGGAGTAT 57.201 33.333 0.00 0.00 0.00 2.12
653 658 7.719633 GCACTATATTTTGGAATGAAGGGAGTA 59.280 37.037 0.00 0.00 0.00 2.59
654 659 6.547510 GCACTATATTTTGGAATGAAGGGAGT 59.452 38.462 0.00 0.00 0.00 3.85
655 660 6.293626 CGCACTATATTTTGGAATGAAGGGAG 60.294 42.308 0.00 0.00 0.00 4.30
656 661 5.530915 CGCACTATATTTTGGAATGAAGGGA 59.469 40.000 0.00 0.00 0.00 4.20
657 662 5.299279 ACGCACTATATTTTGGAATGAAGGG 59.701 40.000 0.00 0.00 0.00 3.95
658 663 6.377327 ACGCACTATATTTTGGAATGAAGG 57.623 37.500 0.00 0.00 0.00 3.46
659 664 6.430451 GGACGCACTATATTTTGGAATGAAG 58.570 40.000 0.00 0.00 0.00 3.02
660 665 5.007234 CGGACGCACTATATTTTGGAATGAA 59.993 40.000 0.00 0.00 0.00 2.57
661 666 4.509970 CGGACGCACTATATTTTGGAATGA 59.490 41.667 0.00 0.00 0.00 2.57
662 667 4.772434 CGGACGCACTATATTTTGGAATG 58.228 43.478 0.00 0.00 0.00 2.67
663 668 3.250040 GCGGACGCACTATATTTTGGAAT 59.750 43.478 12.31 0.00 41.49 3.01
664 669 2.610374 GCGGACGCACTATATTTTGGAA 59.390 45.455 12.31 0.00 41.49 3.53
665 670 2.206750 GCGGACGCACTATATTTTGGA 58.793 47.619 12.31 0.00 41.49 3.53
666 671 1.070843 CGCGGACGCACTATATTTTGG 60.071 52.381 17.35 0.00 42.06 3.28
667 672 2.279250 CGCGGACGCACTATATTTTG 57.721 50.000 17.35 0.00 42.06 2.44
679 684 2.113131 AACCTTGAAAAGCGCGGACG 62.113 55.000 8.83 0.00 44.44 4.79
680 685 0.385598 GAACCTTGAAAAGCGCGGAC 60.386 55.000 8.83 0.00 44.44 4.79
681 686 0.816018 TGAACCTTGAAAAGCGCGGA 60.816 50.000 8.83 0.00 44.44 5.54
682 687 0.030101 TTGAACCTTGAAAAGCGCGG 59.970 50.000 8.83 0.00 44.44 6.46
683 688 1.120437 GTTGAACCTTGAAAAGCGCG 58.880 50.000 0.00 0.00 44.44 6.86
684 689 2.492019 AGTTGAACCTTGAAAAGCGC 57.508 45.000 0.00 0.00 44.44 5.92
685 690 4.265320 GTCAAAGTTGAACCTTGAAAAGCG 59.735 41.667 10.63 0.00 40.01 4.68
686 691 4.566759 GGTCAAAGTTGAACCTTGAAAAGC 59.433 41.667 10.63 0.00 40.01 3.51
687 692 5.719173 TGGTCAAAGTTGAACCTTGAAAAG 58.281 37.500 10.63 0.00 44.20 2.27
688 693 5.730296 TGGTCAAAGTTGAACCTTGAAAA 57.270 34.783 10.63 0.60 44.20 2.29
689 694 5.930837 ATGGTCAAAGTTGAACCTTGAAA 57.069 34.783 10.63 3.85 44.20 2.69
690 695 7.411486 TTTATGGTCAAAGTTGAACCTTGAA 57.589 32.000 10.63 0.00 44.20 2.69
691 696 7.595819 ATTTATGGTCAAAGTTGAACCTTGA 57.404 32.000 5.31 5.31 44.20 3.02
692 697 8.661352 AAATTTATGGTCAAAGTTGAACCTTG 57.339 30.769 6.62 0.29 44.20 3.61
694 699 9.758651 GTTAAATTTATGGTCAAAGTTGAACCT 57.241 29.630 6.62 0.00 44.20 3.50
695 700 8.984764 GGTTAAATTTATGGTCAAAGTTGAACC 58.015 33.333 6.62 6.25 44.20 3.62
696 701 9.535878 TGGTTAAATTTATGGTCAAAGTTGAAC 57.464 29.630 1.98 1.98 45.04 3.18
698 703 9.535878 GTTGGTTAAATTTATGGTCAAAGTTGA 57.464 29.630 0.00 0.00 34.20 3.18
699 704 8.484008 CGTTGGTTAAATTTATGGTCAAAGTTG 58.516 33.333 0.00 0.00 29.44 3.16
700 705 8.414778 TCGTTGGTTAAATTTATGGTCAAAGTT 58.585 29.630 0.00 0.00 31.36 2.66
701 706 7.942990 TCGTTGGTTAAATTTATGGTCAAAGT 58.057 30.769 0.00 0.00 0.00 2.66
702 707 8.293867 TCTCGTTGGTTAAATTTATGGTCAAAG 58.706 33.333 0.00 4.88 0.00 2.77
703 708 8.077386 GTCTCGTTGGTTAAATTTATGGTCAAA 58.923 33.333 0.00 0.00 0.00 2.69
704 709 7.308710 GGTCTCGTTGGTTAAATTTATGGTCAA 60.309 37.037 0.00 0.00 0.00 3.18
705 710 6.149807 GGTCTCGTTGGTTAAATTTATGGTCA 59.850 38.462 0.00 0.00 0.00 4.02
706 711 6.149807 TGGTCTCGTTGGTTAAATTTATGGTC 59.850 38.462 0.00 0.00 0.00 4.02
707 712 6.005198 TGGTCTCGTTGGTTAAATTTATGGT 58.995 36.000 0.00 0.00 0.00 3.55
708 713 6.503589 TGGTCTCGTTGGTTAAATTTATGG 57.496 37.500 0.00 0.00 0.00 2.74
709 714 7.590279 AGTTGGTCTCGTTGGTTAAATTTATG 58.410 34.615 0.00 0.00 0.00 1.90
710 715 7.754851 AGTTGGTCTCGTTGGTTAAATTTAT 57.245 32.000 0.00 0.00 0.00 1.40
711 716 7.714377 TGTAGTTGGTCTCGTTGGTTAAATTTA 59.286 33.333 0.00 0.00 0.00 1.40
712 717 6.543100 TGTAGTTGGTCTCGTTGGTTAAATTT 59.457 34.615 0.00 0.00 0.00 1.82
713 718 6.056884 TGTAGTTGGTCTCGTTGGTTAAATT 58.943 36.000 0.00 0.00 0.00 1.82
714 719 5.613329 TGTAGTTGGTCTCGTTGGTTAAAT 58.387 37.500 0.00 0.00 0.00 1.40
715 720 5.021033 TGTAGTTGGTCTCGTTGGTTAAA 57.979 39.130 0.00 0.00 0.00 1.52
716 721 4.669206 TGTAGTTGGTCTCGTTGGTTAA 57.331 40.909 0.00 0.00 0.00 2.01
717 722 4.669206 TTGTAGTTGGTCTCGTTGGTTA 57.331 40.909 0.00 0.00 0.00 2.85
718 723 3.547054 TTGTAGTTGGTCTCGTTGGTT 57.453 42.857 0.00 0.00 0.00 3.67
719 724 3.764237 ATTGTAGTTGGTCTCGTTGGT 57.236 42.857 0.00 0.00 0.00 3.67
720 725 4.062293 TCAATTGTAGTTGGTCTCGTTGG 58.938 43.478 5.13 0.00 0.00 3.77
721 726 5.465390 TCTTCAATTGTAGTTGGTCTCGTTG 59.535 40.000 11.33 0.00 0.00 4.10
722 727 5.607477 TCTTCAATTGTAGTTGGTCTCGTT 58.393 37.500 11.33 0.00 0.00 3.85
723 728 5.209818 TCTTCAATTGTAGTTGGTCTCGT 57.790 39.130 11.33 0.00 0.00 4.18
724 729 6.539649 TTTCTTCAATTGTAGTTGGTCTCG 57.460 37.500 11.33 0.00 0.00 4.04
782 787 9.965824 CGGGAGCAAAAATTATATAAGTGAATT 57.034 29.630 1.02 0.00 0.00 2.17
810 815 5.712217 TTTAACTATCAAGACCGATTGCG 57.288 39.130 0.00 0.00 37.24 4.85
811 816 9.434559 GTAAATTTAACTATCAAGACCGATTGC 57.565 33.333 0.00 0.00 0.00 3.56
812 817 9.632969 CGTAAATTTAACTATCAAGACCGATTG 57.367 33.333 0.00 0.00 0.00 2.67
813 818 8.823818 CCGTAAATTTAACTATCAAGACCGATT 58.176 33.333 0.00 0.00 0.00 3.34
814 819 7.983484 ACCGTAAATTTAACTATCAAGACCGAT 59.017 33.333 0.00 0.00 0.00 4.18
815 820 7.322664 ACCGTAAATTTAACTATCAAGACCGA 58.677 34.615 0.00 0.00 0.00 4.69
816 821 7.276218 TGACCGTAAATTTAACTATCAAGACCG 59.724 37.037 0.00 0.00 0.00 4.79
817 822 8.483307 TGACCGTAAATTTAACTATCAAGACC 57.517 34.615 0.00 0.00 0.00 3.85
826 831 7.646526 GCTTCAACTTTGACCGTAAATTTAACT 59.353 33.333 0.00 0.00 36.83 2.24
827 832 7.432838 TGCTTCAACTTTGACCGTAAATTTAAC 59.567 33.333 0.00 0.00 36.83 2.01
828 833 7.481642 TGCTTCAACTTTGACCGTAAATTTAA 58.518 30.769 0.00 0.00 36.83 1.52
829 834 7.028926 TGCTTCAACTTTGACCGTAAATTTA 57.971 32.000 0.00 0.00 36.83 1.40
830 835 5.897050 TGCTTCAACTTTGACCGTAAATTT 58.103 33.333 0.00 0.00 36.83 1.82
831 836 5.508200 TGCTTCAACTTTGACCGTAAATT 57.492 34.783 0.00 0.00 36.83 1.82
832 837 5.705609 ATGCTTCAACTTTGACCGTAAAT 57.294 34.783 0.00 0.00 36.83 1.40
833 838 5.180492 CCTATGCTTCAACTTTGACCGTAAA 59.820 40.000 0.00 0.00 36.83 2.01
834 839 4.693566 CCTATGCTTCAACTTTGACCGTAA 59.306 41.667 0.00 0.00 36.83 3.18
835 840 4.020928 TCCTATGCTTCAACTTTGACCGTA 60.021 41.667 0.00 0.00 36.83 4.02
836 841 3.074412 CCTATGCTTCAACTTTGACCGT 58.926 45.455 0.00 0.00 36.83 4.83
837 842 3.334691 TCCTATGCTTCAACTTTGACCG 58.665 45.455 0.00 0.00 36.83 4.79
838 843 5.904362 ATTCCTATGCTTCAACTTTGACC 57.096 39.130 0.00 0.00 36.83 4.02
839 844 7.011857 CCTCTATTCCTATGCTTCAACTTTGAC 59.988 40.741 0.00 0.00 36.83 3.18
840 845 7.050377 CCTCTATTCCTATGCTTCAACTTTGA 58.950 38.462 0.00 0.00 34.92 2.69
841 846 7.050377 TCCTCTATTCCTATGCTTCAACTTTG 58.950 38.462 0.00 0.00 0.00 2.77
842 847 7.200434 TCCTCTATTCCTATGCTTCAACTTT 57.800 36.000 0.00 0.00 0.00 2.66
843 848 6.814954 TCCTCTATTCCTATGCTTCAACTT 57.185 37.500 0.00 0.00 0.00 2.66
844 849 6.687647 GCTTCCTCTATTCCTATGCTTCAACT 60.688 42.308 0.00 0.00 0.00 3.16
845 850 5.468409 GCTTCCTCTATTCCTATGCTTCAAC 59.532 44.000 0.00 0.00 0.00 3.18
846 851 5.130975 TGCTTCCTCTATTCCTATGCTTCAA 59.869 40.000 0.00 0.00 0.00 2.69
847 852 4.655649 TGCTTCCTCTATTCCTATGCTTCA 59.344 41.667 0.00 0.00 0.00 3.02
848 853 4.994217 GTGCTTCCTCTATTCCTATGCTTC 59.006 45.833 0.00 0.00 0.00 3.86
849 854 4.657969 AGTGCTTCCTCTATTCCTATGCTT 59.342 41.667 0.00 0.00 0.00 3.91
850 855 4.230455 AGTGCTTCCTCTATTCCTATGCT 58.770 43.478 0.00 0.00 0.00 3.79
851 856 4.615588 AGTGCTTCCTCTATTCCTATGC 57.384 45.455 0.00 0.00 0.00 3.14
852 857 6.656632 TGTAGTGCTTCCTCTATTCCTATG 57.343 41.667 0.00 0.00 0.00 2.23
853 858 7.863901 AATGTAGTGCTTCCTCTATTCCTAT 57.136 36.000 0.00 0.00 0.00 2.57
854 859 8.807118 CATAATGTAGTGCTTCCTCTATTCCTA 58.193 37.037 0.00 0.00 0.00 2.94
855 860 7.510685 TCATAATGTAGTGCTTCCTCTATTCCT 59.489 37.037 0.00 0.00 0.00 3.36
856 861 7.671302 TCATAATGTAGTGCTTCCTCTATTCC 58.329 38.462 0.00 0.00 0.00 3.01
857 862 9.547753 TTTCATAATGTAGTGCTTCCTCTATTC 57.452 33.333 0.00 0.00 0.00 1.75
859 864 9.499479 CATTTCATAATGTAGTGCTTCCTCTAT 57.501 33.333 0.00 0.00 37.06 1.98
860 865 7.933577 CCATTTCATAATGTAGTGCTTCCTCTA 59.066 37.037 0.00 0.00 39.62 2.43
861 866 6.769822 CCATTTCATAATGTAGTGCTTCCTCT 59.230 38.462 0.00 0.00 39.62 3.69
862 867 6.767902 TCCATTTCATAATGTAGTGCTTCCTC 59.232 38.462 0.00 0.00 39.62 3.71
863 868 6.662755 TCCATTTCATAATGTAGTGCTTCCT 58.337 36.000 0.00 0.00 39.62 3.36
864 869 6.016777 CCTCCATTTCATAATGTAGTGCTTCC 60.017 42.308 0.00 0.00 39.62 3.46
865 870 6.016777 CCCTCCATTTCATAATGTAGTGCTTC 60.017 42.308 0.00 0.00 39.62 3.86
866 871 5.829924 CCCTCCATTTCATAATGTAGTGCTT 59.170 40.000 0.00 0.00 39.62 3.91
867 872 5.132648 TCCCTCCATTTCATAATGTAGTGCT 59.867 40.000 0.00 0.00 39.62 4.40
868 873 5.376625 TCCCTCCATTTCATAATGTAGTGC 58.623 41.667 0.00 0.00 39.62 4.40
869 874 6.595682 ACTCCCTCCATTTCATAATGTAGTG 58.404 40.000 0.00 0.00 39.62 2.74
870 875 6.831664 ACTCCCTCCATTTCATAATGTAGT 57.168 37.500 0.00 0.00 39.62 2.73
871 876 7.162082 GGTACTCCCTCCATTTCATAATGTAG 58.838 42.308 0.00 0.00 39.62 2.74
872 877 6.617784 TGGTACTCCCTCCATTTCATAATGTA 59.382 38.462 0.00 0.00 39.62 2.29
873 878 5.431731 TGGTACTCCCTCCATTTCATAATGT 59.568 40.000 0.00 0.00 39.62 2.71
874 879 5.940617 TGGTACTCCCTCCATTTCATAATG 58.059 41.667 0.00 0.00 40.70 1.90
875 880 6.786843 ATGGTACTCCCTCCATTTCATAAT 57.213 37.500 0.00 0.00 41.02 1.28
876 881 6.617784 TGTATGGTACTCCCTCCATTTCATAA 59.382 38.462 2.05 0.00 43.22 1.90
877 882 6.147473 TGTATGGTACTCCCTCCATTTCATA 58.853 40.000 2.05 0.00 43.22 2.15
878 883 4.975147 TGTATGGTACTCCCTCCATTTCAT 59.025 41.667 2.05 0.00 43.22 2.57
879 884 4.367166 TGTATGGTACTCCCTCCATTTCA 58.633 43.478 2.05 1.17 43.22 2.69
880 885 5.071788 TGATGTATGGTACTCCCTCCATTTC 59.928 44.000 2.05 0.09 43.22 2.17
881 886 4.975147 TGATGTATGGTACTCCCTCCATTT 59.025 41.667 2.05 0.00 43.22 2.32
882 887 4.566837 TGATGTATGGTACTCCCTCCATT 58.433 43.478 2.05 0.00 43.22 3.16
883 888 4.163427 CTGATGTATGGTACTCCCTCCAT 58.837 47.826 0.00 0.00 45.10 3.41
884 889 3.576861 CTGATGTATGGTACTCCCTCCA 58.423 50.000 0.00 0.00 38.14 3.86
885 890 2.900546 CCTGATGTATGGTACTCCCTCC 59.099 54.545 0.00 0.00 0.00 4.30
886 891 3.322254 CACCTGATGTATGGTACTCCCTC 59.678 52.174 0.00 0.00 34.79 4.30
887 892 3.309296 CACCTGATGTATGGTACTCCCT 58.691 50.000 0.00 0.00 34.79 4.20
888 893 2.368875 CCACCTGATGTATGGTACTCCC 59.631 54.545 0.00 0.00 34.79 4.30
889 894 2.368875 CCCACCTGATGTATGGTACTCC 59.631 54.545 0.00 0.00 34.79 3.85
890 895 2.224305 GCCCACCTGATGTATGGTACTC 60.224 54.545 0.00 0.00 34.79 2.59
891 896 1.768870 GCCCACCTGATGTATGGTACT 59.231 52.381 0.00 0.00 34.79 2.73
892 897 1.202770 GGCCCACCTGATGTATGGTAC 60.203 57.143 0.00 0.00 34.79 3.34
970 976 2.148768 GCGCAGGGTTGGGTTATATAC 58.851 52.381 0.30 0.00 39.31 1.47
973 979 1.225148 GGCGCAGGGTTGGGTTATA 59.775 57.895 10.83 0.00 39.31 0.98
974 980 2.044352 GGCGCAGGGTTGGGTTAT 60.044 61.111 10.83 0.00 39.31 1.89
975 981 4.354162 GGGCGCAGGGTTGGGTTA 62.354 66.667 10.83 0.00 39.31 2.85
1103 1115 3.444805 GCCAGAGTCTCCGCGTCT 61.445 66.667 4.92 0.00 0.00 4.18
1298 1310 3.619242 GCTAAGTAAGAGCCGAGGGTTTT 60.619 47.826 2.74 2.74 33.60 2.43
1299 1311 2.093606 GCTAAGTAAGAGCCGAGGGTTT 60.094 50.000 0.00 0.00 33.60 3.27
1300 1312 1.481363 GCTAAGTAAGAGCCGAGGGTT 59.519 52.381 0.00 0.00 33.60 4.11
1301 1313 1.112950 GCTAAGTAAGAGCCGAGGGT 58.887 55.000 0.00 0.00 33.60 4.34
1302 1314 1.112113 TGCTAAGTAAGAGCCGAGGG 58.888 55.000 0.00 0.00 39.30 4.30
1303 1315 2.482142 CCTTGCTAAGTAAGAGCCGAGG 60.482 54.545 0.00 0.00 39.30 4.63
1304 1316 2.815478 CCTTGCTAAGTAAGAGCCGAG 58.185 52.381 0.00 0.00 39.30 4.63
1305 1317 1.134788 GCCTTGCTAAGTAAGAGCCGA 60.135 52.381 0.00 0.00 39.30 5.54
1306 1318 1.291132 GCCTTGCTAAGTAAGAGCCG 58.709 55.000 0.00 0.00 39.30 5.52
1307 1319 1.210722 AGGCCTTGCTAAGTAAGAGCC 59.789 52.381 0.00 14.67 39.63 4.70
1308 1320 2.700722 AGGCCTTGCTAAGTAAGAGC 57.299 50.000 0.00 0.00 40.53 4.09
1325 1337 1.807142 GAACCGAAGAAGCAAGGAAGG 59.193 52.381 0.00 0.00 0.00 3.46
1329 1341 1.160137 CCAGAACCGAAGAAGCAAGG 58.840 55.000 0.00 0.00 0.00 3.61
1331 1343 2.158813 AGAACCAGAACCGAAGAAGCAA 60.159 45.455 0.00 0.00 0.00 3.91
1334 1346 4.212214 CAGAAAGAACCAGAACCGAAGAAG 59.788 45.833 0.00 0.00 0.00 2.85
1340 1352 2.143925 GACCAGAAAGAACCAGAACCG 58.856 52.381 0.00 0.00 0.00 4.44
1342 1354 3.142174 CCAGACCAGAAAGAACCAGAAC 58.858 50.000 0.00 0.00 0.00 3.01
1345 1357 1.271597 CCCCAGACCAGAAAGAACCAG 60.272 57.143 0.00 0.00 0.00 4.00
1348 1360 1.608283 CGTCCCCAGACCAGAAAGAAC 60.608 57.143 0.00 0.00 40.12 3.01
1352 1364 0.471211 ACTCGTCCCCAGACCAGAAA 60.471 55.000 0.00 0.00 40.12 2.52
1355 1367 2.973899 CACTCGTCCCCAGACCAG 59.026 66.667 0.00 0.00 40.12 4.00
1357 1369 4.083862 GGCACTCGTCCCCAGACC 62.084 72.222 0.00 0.00 40.12 3.85
1358 1370 2.997897 AGGCACTCGTCCCCAGAC 60.998 66.667 0.00 0.00 39.83 3.51
1360 1372 1.043116 TATCAGGCACTCGTCCCCAG 61.043 60.000 0.00 0.00 34.60 4.45
1362 1374 0.759346 AATATCAGGCACTCGTCCCC 59.241 55.000 0.00 0.00 34.60 4.81
1363 1375 1.689273 AGAATATCAGGCACTCGTCCC 59.311 52.381 0.00 0.00 34.60 4.46
1368 1400 3.944015 ACAAGCAAGAATATCAGGCACTC 59.056 43.478 0.00 0.00 34.60 3.51
1373 1405 3.941483 ACCGAACAAGCAAGAATATCAGG 59.059 43.478 0.00 0.00 0.00 3.86
1391 1423 4.384940 TCAGTCAATTCATCAAACACCGA 58.615 39.130 0.00 0.00 0.00 4.69
1429 1461 3.372206 CCTTGGTACTCTTCGATTGCTTG 59.628 47.826 0.00 0.00 0.00 4.01
1470 1502 6.830873 TCAAGTAGAACTTACTCTACCCAC 57.169 41.667 7.06 0.00 46.10 4.61
1497 1529 2.092914 CCATGTACAGAAAGGGGAGGAC 60.093 54.545 0.33 0.00 0.00 3.85
1512 1544 5.772393 AGTACCATCCAAGAAACCATGTA 57.228 39.130 0.00 0.00 0.00 2.29
1513 1545 4.657814 AGTACCATCCAAGAAACCATGT 57.342 40.909 0.00 0.00 0.00 3.21
1525 1557 5.793030 AGCTAGTGTGATTAGTACCATCC 57.207 43.478 0.00 0.00 0.00 3.51
1531 1563 6.546403 CCAGGTTCTAGCTAGTGTGATTAGTA 59.454 42.308 20.10 0.00 0.00 1.82
1540 1572 2.159170 GCACTCCAGGTTCTAGCTAGTG 60.159 54.545 20.10 11.40 36.12 2.74
1541 1573 2.104170 GCACTCCAGGTTCTAGCTAGT 58.896 52.381 20.10 0.00 0.00 2.57
1548 1585 0.846693 ACCTTTGCACTCCAGGTTCT 59.153 50.000 0.00 0.00 37.70 3.01
1553 1590 1.882623 GGAGAAACCTTTGCACTCCAG 59.117 52.381 11.35 0.00 44.31 3.86
1569 1607 5.567623 GCCTATAGAAATCGATGCAAGGAGA 60.568 44.000 0.00 0.00 0.00 3.71
1618 1669 1.226859 CCCATTTGATGCAGCTGCG 60.227 57.895 32.11 16.51 45.83 5.18
1710 1761 1.878522 GTACCGCTCGTCATGCCAG 60.879 63.158 0.00 0.00 0.00 4.85
1716 1767 0.172578 CATCCTTGTACCGCTCGTCA 59.827 55.000 0.00 0.00 0.00 4.35
1719 1770 1.338337 AGATCATCCTTGTACCGCTCG 59.662 52.381 0.00 0.00 0.00 5.03
2052 2103 4.948341 ACAAAGTAACCCCAAATCCAAC 57.052 40.909 0.00 0.00 0.00 3.77
2064 2115 5.390567 CGGGTGCTTGAATCTACAAAGTAAC 60.391 44.000 0.00 0.00 0.00 2.50
2197 2248 6.457355 TGCAGACTGGAAACTAATACGTAAA 58.543 36.000 4.26 0.00 0.00 2.01
2292 2343 1.884235 ACTCTGCAGGTAAAGTGTGC 58.116 50.000 15.13 0.00 37.73 4.57
2305 2356 2.028567 AGAGGCAAGTCAAGTACTCTGC 60.029 50.000 0.00 0.74 37.50 4.26
2315 2366 4.776349 TGTACAAAAAGAGAGGCAAGTCA 58.224 39.130 0.00 0.00 0.00 3.41
2316 2367 5.948992 ATGTACAAAAAGAGAGGCAAGTC 57.051 39.130 0.00 0.00 0.00 3.01
2503 2554 3.055819 TCCTTCTTTCTGGTTGATCTCCG 60.056 47.826 0.00 0.00 0.00 4.63
2605 2659 2.352651 CACTTGCGGTATCATCCTGTTG 59.647 50.000 0.00 0.00 0.00 3.33
2654 2708 2.616842 GTTTCACCACGGTTCAAGTCAT 59.383 45.455 0.00 0.00 0.00 3.06
2823 2877 7.984391 TGTTTGATTACATGCTAATGGTACTG 58.016 34.615 0.00 0.00 38.19 2.74
2890 2944 4.764679 TCTGTGAATGTGCCAATACAAC 57.235 40.909 0.00 0.00 33.69 3.32
3320 3378 4.679373 ACTCGGCACATTCTTCATCTAT 57.321 40.909 0.00 0.00 0.00 1.98
3395 3454 8.562052 GTCGAAAGGGAATTTAGAAACACTTTA 58.438 33.333 0.00 0.00 34.77 1.85
3421 3480 0.183731 GGGCTGGTTCCCTAAGATGG 59.816 60.000 0.00 0.00 43.13 3.51
3531 3590 0.179004 TGTGGAAACGGAAGGTGCAT 60.179 50.000 0.00 0.00 0.00 3.96
3537 3596 8.458843 AGAAAACATAATATGTGGAAACGGAAG 58.541 33.333 6.67 0.00 44.07 3.46
3540 3599 8.458843 AGAAGAAAACATAATATGTGGAAACGG 58.541 33.333 6.67 0.00 44.07 4.44
3565 3624 3.571401 ACAGGCAGGTCAAAAATTGAGAG 59.429 43.478 0.00 0.00 41.01 3.20
3567 3626 4.326504 AACAGGCAGGTCAAAAATTGAG 57.673 40.909 0.00 0.00 41.01 3.02
3573 3632 4.020662 ACAAAGAAAACAGGCAGGTCAAAA 60.021 37.500 0.00 0.00 0.00 2.44
3607 3669 3.343617 CGGGTTCTCCTTAAGCAATTCA 58.656 45.455 0.00 0.00 0.00 2.57
3670 3732 8.800231 TCAAACAACAAGTCATCAACAATATG 57.200 30.769 0.00 0.00 0.00 1.78
3674 3736 7.488792 CAGATTCAAACAACAAGTCATCAACAA 59.511 33.333 0.00 0.00 0.00 2.83
3675 3737 6.974048 CAGATTCAAACAACAAGTCATCAACA 59.026 34.615 0.00 0.00 0.00 3.33
3676 3738 6.974622 ACAGATTCAAACAACAAGTCATCAAC 59.025 34.615 0.00 0.00 0.00 3.18
3680 3742 5.284079 GCACAGATTCAAACAACAAGTCAT 58.716 37.500 0.00 0.00 0.00 3.06
3685 3747 3.953612 AGAGGCACAGATTCAAACAACAA 59.046 39.130 0.00 0.00 0.00 2.83
3686 3748 3.554934 AGAGGCACAGATTCAAACAACA 58.445 40.909 0.00 0.00 0.00 3.33
3687 3749 5.634896 CATAGAGGCACAGATTCAAACAAC 58.365 41.667 0.00 0.00 0.00 3.32
3706 3768 9.547753 TTAGAGTCTAAAGCTTATTTGGCATAG 57.452 33.333 10.25 0.00 0.00 2.23
3755 3817 4.641989 GGATCACAACAATCAAGCCTACAT 59.358 41.667 0.00 0.00 0.00 2.29
3764 3830 5.559770 AGTGTACATGGATCACAACAATCA 58.440 37.500 15.61 0.00 34.94 2.57
3829 3895 8.535690 AATAACTTTGTGACAAAACGGAAAAA 57.464 26.923 12.26 0.00 0.00 1.94
3830 3896 8.436200 CAAATAACTTTGTGACAAAACGGAAAA 58.564 29.630 12.26 0.00 37.54 2.29
3832 3898 7.313646 TCAAATAACTTTGTGACAAAACGGAA 58.686 30.769 12.26 0.00 42.02 4.30
3834 3900 7.647715 AGATCAAATAACTTTGTGACAAAACGG 59.352 33.333 12.26 3.38 42.02 4.44
3837 3903 8.816144 GCAAGATCAAATAACTTTGTGACAAAA 58.184 29.630 12.26 0.00 42.02 2.44
3841 3907 6.446318 TGGCAAGATCAAATAACTTTGTGAC 58.554 36.000 0.00 0.00 42.02 3.67
3851 3986 5.819379 CACTAGAAGCTGGCAAGATCAAATA 59.181 40.000 0.00 0.00 0.00 1.40
3987 4123 0.871722 TTGTCATGGCACTTGCGTAC 59.128 50.000 0.00 0.00 43.26 3.67
4028 4165 4.079844 TGATCCAATGTGTCATGTACCCAT 60.080 41.667 0.00 0.00 0.00 4.00
4072 4209 0.109597 CGAGCTGTTGCAAATGGGAC 60.110 55.000 0.00 0.00 42.74 4.46
4074 4211 1.444895 GCGAGCTGTTGCAAATGGG 60.445 57.895 0.00 0.00 42.74 4.00
4103 4240 7.582048 ATGGAAGAAAATTATGCCTTTTCCAGG 60.582 37.037 8.38 0.00 44.07 4.45
4104 4241 6.700352 TGGAAGAAAATTATGCCTTTTCCAG 58.300 36.000 5.22 0.00 41.42 3.86
4107 4244 7.330262 TCCATGGAAGAAAATTATGCCTTTTC 58.670 34.615 13.46 0.00 41.02 2.29
4112 4264 6.294955 GGAGATCCATGGAAGAAAATTATGCC 60.295 42.308 20.67 3.78 35.64 4.40
4137 4289 2.806608 AAGTTTGCAGCAGTGGAATG 57.193 45.000 0.00 0.00 33.47 2.67
4141 4293 1.677576 TGAGAAAGTTTGCAGCAGTGG 59.322 47.619 0.00 0.00 0.00 4.00
4144 4296 1.952296 ACCTGAGAAAGTTTGCAGCAG 59.048 47.619 0.00 0.00 0.00 4.24
4178 4330 1.339151 CCTTCTTCTGTACCCTGTGGC 60.339 57.143 0.00 0.00 33.59 5.01
4180 4332 1.673033 CGCCTTCTTCTGTACCCTGTG 60.673 57.143 0.00 0.00 0.00 3.66
4293 4467 1.315257 AAATCATGGAGGGCACACGC 61.315 55.000 0.00 0.00 37.44 5.34
4294 4468 0.734889 GAAATCATGGAGGGCACACG 59.265 55.000 0.00 0.00 0.00 4.49
4295 4469 0.734889 CGAAATCATGGAGGGCACAC 59.265 55.000 0.00 0.00 0.00 3.82
4296 4470 0.617935 TCGAAATCATGGAGGGCACA 59.382 50.000 0.00 0.00 0.00 4.57
4297 4471 1.750193 TTCGAAATCATGGAGGGCAC 58.250 50.000 0.00 0.00 0.00 5.01
4298 4472 2.734755 ATTCGAAATCATGGAGGGCA 57.265 45.000 0.00 0.00 0.00 5.36
4299 4473 5.712152 AATTATTCGAAATCATGGAGGGC 57.288 39.130 0.00 0.00 0.00 5.19
4300 4474 6.919662 CACAAATTATTCGAAATCATGGAGGG 59.080 38.462 0.00 0.00 0.00 4.30
4301 4475 7.433131 CACACAAATTATTCGAAATCATGGAGG 59.567 37.037 0.00 0.00 0.00 4.30
4302 4476 7.043854 GCACACAAATTATTCGAAATCATGGAG 60.044 37.037 0.00 0.00 0.00 3.86
4303 4477 6.751425 GCACACAAATTATTCGAAATCATGGA 59.249 34.615 0.00 0.00 0.00 3.41
4307 4481 5.567154 CACGCACACAAATTATTCGAAATCA 59.433 36.000 0.00 0.00 0.00 2.57
4313 4487 1.572717 CGCACGCACACAAATTATTCG 59.427 47.619 0.00 0.00 0.00 3.34
4336 4518 3.247411 CGTTAAGAGCACAATCACACACA 59.753 43.478 0.00 0.00 0.00 3.72
4344 4526 7.553881 ACAATAATAGCGTTAAGAGCACAAT 57.446 32.000 5.76 0.00 37.01 2.71
4349 4531 6.365518 GGGAGTACAATAATAGCGTTAAGAGC 59.634 42.308 0.00 0.00 0.00 4.09
4357 4539 3.255149 ACGGAGGGAGTACAATAATAGCG 59.745 47.826 0.00 0.00 0.00 4.26
4367 4549 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
4369 4551 2.910977 AGTATTTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
4370 4552 3.629142 AGTATTTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
4371 4553 3.073356 ACAAGTATTTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 0.00 4.20
4372 4554 3.418047 ACAAGTATTTTGGAACGGAGGG 58.582 45.455 0.00 0.00 0.00 4.30
4373 4555 3.124636 CGACAAGTATTTTGGAACGGAGG 59.875 47.826 0.00 0.00 0.00 4.30
4374 4556 3.744426 ACGACAAGTATTTTGGAACGGAG 59.256 43.478 0.00 0.00 0.00 4.63
4375 4557 3.495377 CACGACAAGTATTTTGGAACGGA 59.505 43.478 0.00 0.00 0.00 4.69
4376 4558 3.364565 CCACGACAAGTATTTTGGAACGG 60.365 47.826 0.00 0.00 0.00 4.44
4377 4559 3.249080 ACCACGACAAGTATTTTGGAACG 59.751 43.478 0.00 0.00 0.00 3.95
4378 4560 4.823790 ACCACGACAAGTATTTTGGAAC 57.176 40.909 0.00 0.00 0.00 3.62
4379 4561 6.056884 AGTAACCACGACAAGTATTTTGGAA 58.943 36.000 0.00 0.00 0.00 3.53
4380 4562 5.613329 AGTAACCACGACAAGTATTTTGGA 58.387 37.500 0.00 0.00 0.00 3.53
4381 4563 5.699458 AGAGTAACCACGACAAGTATTTTGG 59.301 40.000 0.00 0.00 0.00 3.28
4382 4564 6.128634 GGAGAGTAACCACGACAAGTATTTTG 60.129 42.308 0.00 0.00 0.00 2.44
4383 4565 5.930569 GGAGAGTAACCACGACAAGTATTTT 59.069 40.000 0.00 0.00 0.00 1.82
4384 4566 5.011329 TGGAGAGTAACCACGACAAGTATTT 59.989 40.000 0.00 0.00 32.03 1.40
4385 4567 4.525487 TGGAGAGTAACCACGACAAGTATT 59.475 41.667 0.00 0.00 32.03 1.89
4386 4568 4.084287 TGGAGAGTAACCACGACAAGTAT 58.916 43.478 0.00 0.00 32.03 2.12
4387 4569 3.489355 TGGAGAGTAACCACGACAAGTA 58.511 45.455 0.00 0.00 32.03 2.24
4388 4570 2.313317 TGGAGAGTAACCACGACAAGT 58.687 47.619 0.00 0.00 32.03 3.16
4389 4571 3.193691 AGATGGAGAGTAACCACGACAAG 59.806 47.826 0.00 0.00 40.36 3.16
4390 4572 3.162666 AGATGGAGAGTAACCACGACAA 58.837 45.455 0.00 0.00 40.36 3.18
4391 4573 2.803956 AGATGGAGAGTAACCACGACA 58.196 47.619 0.00 0.00 40.36 4.35
4392 4574 3.512680 CAAGATGGAGAGTAACCACGAC 58.487 50.000 0.00 0.00 40.36 4.34
4393 4575 2.094182 GCAAGATGGAGAGTAACCACGA 60.094 50.000 0.00 0.00 40.36 4.35
4394 4576 2.093973 AGCAAGATGGAGAGTAACCACG 60.094 50.000 0.00 0.00 40.36 4.94
4395 4577 3.055819 TGAGCAAGATGGAGAGTAACCAC 60.056 47.826 0.00 0.00 40.36 4.16
4396 4578 3.173151 TGAGCAAGATGGAGAGTAACCA 58.827 45.455 0.00 0.00 41.83 3.67
4397 4579 3.895232 TGAGCAAGATGGAGAGTAACC 57.105 47.619 0.00 0.00 0.00 2.85
4398 4580 7.550906 AGTTAATTGAGCAAGATGGAGAGTAAC 59.449 37.037 0.00 0.00 0.00 2.50
4399 4581 7.624549 AGTTAATTGAGCAAGATGGAGAGTAA 58.375 34.615 0.00 0.00 0.00 2.24
4426 4616 7.257722 TGCAGACTAAAAAGAAACAAAAGGAG 58.742 34.615 0.00 0.00 0.00 3.69
4427 4617 7.164230 TGCAGACTAAAAAGAAACAAAAGGA 57.836 32.000 0.00 0.00 0.00 3.36
4428 4618 7.492344 ACATGCAGACTAAAAAGAAACAAAAGG 59.508 33.333 0.00 0.00 0.00 3.11
4429 4619 8.411318 ACATGCAGACTAAAAAGAAACAAAAG 57.589 30.769 0.00 0.00 0.00 2.27
4430 4620 9.862371 TTACATGCAGACTAAAAAGAAACAAAA 57.138 25.926 0.00 0.00 0.00 2.44
4431 4621 9.515020 CTTACATGCAGACTAAAAAGAAACAAA 57.485 29.630 0.00 0.00 0.00 2.83
4432 4622 8.898761 TCTTACATGCAGACTAAAAAGAAACAA 58.101 29.630 0.00 0.00 0.00 2.83
4433 4623 8.445275 TCTTACATGCAGACTAAAAAGAAACA 57.555 30.769 0.00 0.00 0.00 2.83
4434 4624 9.899226 AATCTTACATGCAGACTAAAAAGAAAC 57.101 29.630 0.00 0.00 0.00 2.78
4436 4626 9.897744 CAAATCTTACATGCAGACTAAAAAGAA 57.102 29.630 0.00 0.00 0.00 2.52
4437 4627 9.283768 TCAAATCTTACATGCAGACTAAAAAGA 57.716 29.630 0.00 0.00 0.00 2.52
4440 4630 9.230122 TGATCAAATCTTACATGCAGACTAAAA 57.770 29.630 0.00 0.00 0.00 1.52
4441 4631 8.791327 TGATCAAATCTTACATGCAGACTAAA 57.209 30.769 0.00 0.00 0.00 1.85
4442 4632 8.791327 TTGATCAAATCTTACATGCAGACTAA 57.209 30.769 5.45 0.00 0.00 2.24
4443 4633 8.791327 TTTGATCAAATCTTACATGCAGACTA 57.209 30.769 16.91 0.00 0.00 2.59
4444 4634 7.392673 ACTTTGATCAAATCTTACATGCAGACT 59.607 33.333 20.76 0.00 0.00 3.24
4445 4635 7.533426 ACTTTGATCAAATCTTACATGCAGAC 58.467 34.615 20.76 0.00 0.00 3.51
4446 4636 7.391275 TGACTTTGATCAAATCTTACATGCAGA 59.609 33.333 20.76 0.00 0.00 4.26
4447 4637 7.532571 TGACTTTGATCAAATCTTACATGCAG 58.467 34.615 20.76 7.48 0.00 4.41
4448 4638 7.451501 TGACTTTGATCAAATCTTACATGCA 57.548 32.000 20.76 6.97 0.00 3.96
4449 4639 8.746922 TTTGACTTTGATCAAATCTTACATGC 57.253 30.769 20.76 4.82 42.32 4.06
4564 4754 8.705594 ACATCTACAACACTAAAGCTATATGGT 58.294 33.333 0.00 0.00 0.00 3.55
4565 4755 9.547753 AACATCTACAACACTAAAGCTATATGG 57.452 33.333 0.00 0.00 0.00 2.74
4679 4869 9.688592 CTTTCTTCATTTCTTTTTAGTCTGCAT 57.311 29.630 0.00 0.00 0.00 3.96
4680 4870 8.686334 ACTTTCTTCATTTCTTTTTAGTCTGCA 58.314 29.630 0.00 0.00 0.00 4.41
4691 4881 9.507329 TGCTTGATACTACTTTCTTCATTTCTT 57.493 29.630 0.00 0.00 0.00 2.52
4692 4882 9.678260 ATGCTTGATACTACTTTCTTCATTTCT 57.322 29.630 0.00 0.00 0.00 2.52
4693 4883 9.713740 CATGCTTGATACTACTTTCTTCATTTC 57.286 33.333 0.00 0.00 0.00 2.17
4694 4884 9.453572 TCATGCTTGATACTACTTTCTTCATTT 57.546 29.630 0.00 0.00 0.00 2.32
4695 4885 9.453572 TTCATGCTTGATACTACTTTCTTCATT 57.546 29.630 2.75 0.00 0.00 2.57
4696 4886 8.887717 GTTCATGCTTGATACTACTTTCTTCAT 58.112 33.333 2.75 0.00 0.00 2.57
4697 4887 7.063426 CGTTCATGCTTGATACTACTTTCTTCA 59.937 37.037 2.75 0.00 0.00 3.02
4698 4888 7.275779 TCGTTCATGCTTGATACTACTTTCTTC 59.724 37.037 2.75 0.00 0.00 2.87
4699 4889 7.097192 TCGTTCATGCTTGATACTACTTTCTT 58.903 34.615 2.75 0.00 0.00 2.52
4700 4890 6.631016 TCGTTCATGCTTGATACTACTTTCT 58.369 36.000 2.75 0.00 0.00 2.52
4701 4891 6.887376 TCGTTCATGCTTGATACTACTTTC 57.113 37.500 2.75 0.00 0.00 2.62
4702 4892 7.360946 GGTTTCGTTCATGCTTGATACTACTTT 60.361 37.037 2.75 0.00 0.00 2.66
4703 4893 6.092259 GGTTTCGTTCATGCTTGATACTACTT 59.908 38.462 2.75 0.00 0.00 2.24
4704 4894 5.581085 GGTTTCGTTCATGCTTGATACTACT 59.419 40.000 2.75 0.00 0.00 2.57
4705 4895 5.350365 TGGTTTCGTTCATGCTTGATACTAC 59.650 40.000 2.75 0.00 0.00 2.73
4706 4896 5.483811 TGGTTTCGTTCATGCTTGATACTA 58.516 37.500 2.75 0.00 0.00 1.82
4707 4897 4.323417 TGGTTTCGTTCATGCTTGATACT 58.677 39.130 2.75 0.00 0.00 2.12
4708 4898 4.678509 TGGTTTCGTTCATGCTTGATAC 57.321 40.909 2.75 4.43 0.00 2.24
4709 4899 4.096231 CCATGGTTTCGTTCATGCTTGATA 59.904 41.667 2.57 0.00 39.36 2.15
4710 4900 3.119388 CCATGGTTTCGTTCATGCTTGAT 60.119 43.478 2.57 0.00 39.36 2.57
4711 4901 2.228582 CCATGGTTTCGTTCATGCTTGA 59.771 45.455 2.57 0.00 39.36 3.02
4729 4919 1.224592 GAATCCGTGTGCCCTCCAT 59.775 57.895 0.00 0.00 0.00 3.41
4753 4944 1.570813 TTGCACCGCTATCTGAATCG 58.429 50.000 0.00 0.00 0.00 3.34
4784 4992 1.906333 TCGTGTACCAGGCTGCTGA 60.906 57.895 9.56 0.00 0.00 4.26
4834 5043 1.946745 CTCTTTCGGAGGAATGCTCC 58.053 55.000 11.06 11.06 42.81 4.70
4871 5080 2.871096 TAAACCACTCGCCTGGAAAT 57.129 45.000 0.00 0.00 35.04 2.17
4885 5094 3.668596 ACGTTATCGCTTGCATAAACC 57.331 42.857 0.00 0.00 41.18 3.27
4895 5104 5.486706 CGCTGTTTTTAATACGTTATCGCT 58.513 37.500 0.00 0.00 41.18 4.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.