Multiple sequence alignment - TraesCS6A01G167700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G167700 chr6A 100.000 3109 0 0 1 3109 171808329 171811437 0.000000e+00 5742.0
1 TraesCS6A01G167700 chr5A 93.168 1127 51 7 462 1587 437069226 437068125 0.000000e+00 1631.0
2 TraesCS6A01G167700 chr5A 95.622 731 28 3 1586 2315 437068050 437067323 0.000000e+00 1170.0
3 TraesCS6A01G167700 chr5A 90.894 593 33 5 2304 2878 437067251 437066662 0.000000e+00 776.0
4 TraesCS6A01G167700 chr5A 84.165 461 58 12 11 462 571956227 571956681 1.710000e-117 433.0
5 TraesCS6A01G167700 chr5A 100.000 49 0 0 3061 3109 437066658 437066610 1.190000e-14 91.6
6 TraesCS6A01G167700 chr5A 86.538 52 7 0 460 511 129596676 129596625 1.200000e-04 58.4
7 TraesCS6A01G167700 chr1A 93.079 1127 52 7 462 1587 564762662 564763763 0.000000e+00 1626.0
8 TraesCS6A01G167700 chr1A 95.330 728 28 4 1586 2312 564763838 564764560 0.000000e+00 1151.0
9 TraesCS6A01G167700 chr1A 90.787 597 34 5 2304 2882 564764635 564765228 0.000000e+00 778.0
10 TraesCS6A01G167700 chr1A 84.848 66 8 2 448 511 579003244 579003309 7.200000e-07 65.8
11 TraesCS6A01G167700 chr7A 92.321 1133 55 9 462 1587 45716361 45715254 0.000000e+00 1581.0
12 TraesCS6A01G167700 chr7A 95.486 731 27 4 1586 2315 45715179 45714454 0.000000e+00 1162.0
13 TraesCS6A01G167700 chr7A 90.285 597 37 5 2304 2882 45714382 45713789 0.000000e+00 761.0
14 TraesCS6A01G167700 chr7A 81.915 470 71 13 2 462 511047458 511047922 4.860000e-103 385.0
15 TraesCS6A01G167700 chr7A 96.226 53 2 0 3057 3109 45713793 45713741 1.540000e-13 87.9
16 TraesCS6A01G167700 chr6D 90.828 1123 88 9 462 1582 232749438 232750547 0.000000e+00 1489.0
17 TraesCS6A01G167700 chr6D 93.981 731 40 3 1582 2310 232750632 232751360 0.000000e+00 1103.0
18 TraesCS6A01G167700 chr6D 83.007 459 72 6 8 462 322205574 322206030 8.020000e-111 411.0
19 TraesCS6A01G167700 chr3D 91.958 858 57 7 730 1585 232455242 232454395 0.000000e+00 1192.0
20 TraesCS6A01G167700 chr3D 93.716 732 39 5 1582 2310 232454313 232453586 0.000000e+00 1090.0
21 TraesCS6A01G167700 chr3D 85.567 388 52 3 77 462 290286544 290286159 1.340000e-108 403.0
22 TraesCS6A01G167700 chr3D 81.545 466 76 7 5 462 165770248 165770711 2.930000e-100 375.0
23 TraesCS6A01G167700 chr3D 91.250 80 7 0 2465 2544 442812986 442812907 3.280000e-20 110.0
24 TraesCS6A01G167700 chr7B 84.188 468 61 12 2 462 189911395 189911856 2.850000e-120 442.0
25 TraesCS6A01G167700 chr7B 86.538 52 7 0 460 511 226424936 226424885 1.200000e-04 58.4
26 TraesCS6A01G167700 chr3B 85.530 387 52 3 78 462 382693106 382692722 4.830000e-108 401.0
27 TraesCS6A01G167700 chr5D 82.721 463 61 12 4 462 453119401 453119848 8.080000e-106 394.0
28 TraesCS6A01G167700 chr5D 92.308 78 6 0 2462 2539 51845699 51845622 9.110000e-21 111.0
29 TraesCS6A01G167700 chr3A 81.223 458 69 13 7 460 564452180 564452624 1.370000e-93 353.0
30 TraesCS6A01G167700 chr2B 83.740 123 14 4 1463 1581 646205743 646205863 9.110000e-21 111.0
31 TraesCS6A01G167700 chr2B 89.655 87 6 3 2462 2546 639927553 639927638 1.180000e-19 108.0
32 TraesCS6A01G167700 chr2B 82.927 123 15 4 1463 1581 135701968 135702088 4.240000e-19 106.0
33 TraesCS6A01G167700 chr7D 92.208 77 6 0 2465 2541 436863873 436863797 3.280000e-20 110.0
34 TraesCS6A01G167700 chr4B 90.361 83 8 0 2465 2547 673102012 673101930 3.280000e-20 110.0
35 TraesCS6A01G167700 chr4B 85.246 61 9 0 460 520 497237485 497237425 2.590000e-06 63.9
36 TraesCS6A01G167700 chr4A 81.513 119 12 8 2413 2529 102838227 102838337 4.270000e-14 89.8
37 TraesCS6A01G167700 chr4A 86.538 52 7 0 460 511 716945309 716945258 1.200000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G167700 chr6A 171808329 171811437 3108 False 5742.000 5742 100.000000 1 3109 1 chr6A.!!$F1 3108
1 TraesCS6A01G167700 chr5A 437066610 437069226 2616 True 917.150 1631 94.921000 462 3109 4 chr5A.!!$R2 2647
2 TraesCS6A01G167700 chr1A 564762662 564765228 2566 False 1185.000 1626 93.065333 462 2882 3 chr1A.!!$F2 2420
3 TraesCS6A01G167700 chr7A 45713741 45716361 2620 True 897.975 1581 93.579500 462 3109 4 chr7A.!!$R1 2647
4 TraesCS6A01G167700 chr6D 232749438 232751360 1922 False 1296.000 1489 92.404500 462 2310 2 chr6D.!!$F2 1848
5 TraesCS6A01G167700 chr3D 232453586 232455242 1656 True 1141.000 1192 92.837000 730 2310 2 chr3D.!!$R3 1580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 125 0.036388 TCATCGACCTTGTTGCCTCC 60.036 55.000 0.00 0.0 0.00 4.30 F
131 132 0.251297 CCTTGTTGCCTCCATGACCA 60.251 55.000 0.00 0.0 0.00 4.02 F
134 135 0.405198 TGTTGCCTCCATGACCATGT 59.595 50.000 8.93 0.0 37.11 3.21 F
450 451 1.000274 GTGGGTTCAATCTTGTGGTGC 60.000 52.381 0.00 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1672 1783 0.255890 TATGAAAGCCTGCTCCCCAC 59.744 55.000 0.0 0.0 0.00 4.61 R
1675 1786 2.936202 TCATTATGAAAGCCTGCTCCC 58.064 47.619 0.0 0.0 0.00 4.30 R
1900 2014 3.330701 TGGGGCTTGAGTTTTCTACTGAT 59.669 43.478 0.0 0.0 37.17 2.90 R
2312 2431 3.465742 GCTAGAATGAGCTGATCACCA 57.534 47.619 0.0 0.0 41.91 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.506810 TCCAAAAATTTTATCGCTGCCG 58.493 40.909 3.34 0.00 0.00 5.69
23 24 2.029124 CCAAAAATTTTATCGCTGCCGC 59.971 45.455 3.34 0.00 0.00 6.53
24 25 2.645730 AAAATTTTATCGCTGCCGCA 57.354 40.000 0.37 0.00 35.30 5.69
25 26 2.645730 AAATTTTATCGCTGCCGCAA 57.354 40.000 0.00 0.00 35.30 4.85
26 27 2.193306 AATTTTATCGCTGCCGCAAG 57.807 45.000 0.00 0.00 35.30 4.01
27 28 0.248621 ATTTTATCGCTGCCGCAAGC 60.249 50.000 0.00 0.00 44.14 4.01
28 29 2.265073 TTTTATCGCTGCCGCAAGCC 62.265 55.000 0.00 0.00 42.71 4.35
29 30 3.680620 TTATCGCTGCCGCAAGCCT 62.681 57.895 0.00 0.00 42.71 4.58
45 46 1.952193 GCCTCTGCTCCAAAGAGATC 58.048 55.000 2.03 0.00 43.27 2.75
46 47 1.485895 GCCTCTGCTCCAAAGAGATCT 59.514 52.381 0.00 0.00 43.27 2.75
47 48 2.483538 GCCTCTGCTCCAAAGAGATCTC 60.484 54.545 15.29 15.29 43.27 2.75
48 49 2.765135 CCTCTGCTCCAAAGAGATCTCA 59.235 50.000 24.39 2.49 43.27 3.27
49 50 3.388676 CCTCTGCTCCAAAGAGATCTCAT 59.611 47.826 24.39 10.31 43.27 2.90
50 51 4.501915 CCTCTGCTCCAAAGAGATCTCATC 60.502 50.000 24.39 1.29 43.27 2.92
51 52 4.288398 TCTGCTCCAAAGAGATCTCATCT 58.712 43.478 24.39 5.87 43.39 2.90
52 53 4.099727 TCTGCTCCAAAGAGATCTCATCTG 59.900 45.833 24.39 16.40 43.39 2.90
53 54 3.134262 TGCTCCAAAGAGATCTCATCTGG 59.866 47.826 24.39 23.34 43.39 3.86
54 55 3.387374 GCTCCAAAGAGATCTCATCTGGA 59.613 47.826 26.38 26.38 43.39 3.86
55 56 4.501915 GCTCCAAAGAGATCTCATCTGGAG 60.502 50.000 35.68 35.68 43.48 3.86
56 57 3.387374 TCCAAAGAGATCTCATCTGGAGC 59.613 47.826 25.28 1.27 43.70 4.70
57 58 3.494749 CCAAAGAGATCTCATCTGGAGCC 60.495 52.174 24.39 0.00 43.70 4.70
58 59 2.014010 AGAGATCTCATCTGGAGCCC 57.986 55.000 24.39 0.00 43.70 5.19
59 60 1.504660 AGAGATCTCATCTGGAGCCCT 59.495 52.381 24.39 0.00 43.70 5.19
60 61 2.721355 AGAGATCTCATCTGGAGCCCTA 59.279 50.000 24.39 0.00 43.70 3.53
61 62 3.337605 AGAGATCTCATCTGGAGCCCTAT 59.662 47.826 24.39 0.00 43.70 2.57
62 63 4.095946 GAGATCTCATCTGGAGCCCTATT 58.904 47.826 18.11 0.00 43.70 1.73
63 64 3.839490 AGATCTCATCTGGAGCCCTATTG 59.161 47.826 0.00 0.00 43.70 1.90
64 65 1.696336 TCTCATCTGGAGCCCTATTGC 59.304 52.381 0.00 0.00 43.70 3.56
65 66 1.419012 CTCATCTGGAGCCCTATTGCA 59.581 52.381 0.00 0.00 36.69 4.08
66 67 1.845791 TCATCTGGAGCCCTATTGCAA 59.154 47.619 0.00 0.00 0.00 4.08
67 68 2.241941 TCATCTGGAGCCCTATTGCAAA 59.758 45.455 1.71 0.00 0.00 3.68
68 69 2.897271 TCTGGAGCCCTATTGCAAAA 57.103 45.000 1.71 0.00 0.00 2.44
69 70 3.386932 TCTGGAGCCCTATTGCAAAAT 57.613 42.857 1.71 0.00 0.00 1.82
70 71 3.290710 TCTGGAGCCCTATTGCAAAATC 58.709 45.455 1.71 0.00 0.00 2.17
71 72 2.363359 CTGGAGCCCTATTGCAAAATCC 59.637 50.000 1.71 5.68 0.00 3.01
72 73 1.688735 GGAGCCCTATTGCAAAATCCC 59.311 52.381 1.71 0.00 0.00 3.85
73 74 2.387757 GAGCCCTATTGCAAAATCCCA 58.612 47.619 1.71 0.00 0.00 4.37
74 75 2.101415 GAGCCCTATTGCAAAATCCCAC 59.899 50.000 1.71 0.00 0.00 4.61
75 76 2.110578 GCCCTATTGCAAAATCCCACT 58.889 47.619 1.71 0.00 0.00 4.00
76 77 3.052944 AGCCCTATTGCAAAATCCCACTA 60.053 43.478 1.71 0.00 0.00 2.74
77 78 3.319122 GCCCTATTGCAAAATCCCACTAG 59.681 47.826 1.71 0.00 0.00 2.57
78 79 4.792068 CCCTATTGCAAAATCCCACTAGA 58.208 43.478 1.71 0.00 0.00 2.43
79 80 4.823989 CCCTATTGCAAAATCCCACTAGAG 59.176 45.833 1.71 0.00 0.00 2.43
80 81 4.823989 CCTATTGCAAAATCCCACTAGAGG 59.176 45.833 1.71 0.00 0.00 3.69
88 89 3.648694 CCACTAGAGGGGGAAGCC 58.351 66.667 0.00 0.00 0.00 4.35
89 90 1.306997 CCACTAGAGGGGGAAGCCA 60.307 63.158 0.00 0.00 0.00 4.75
90 91 0.695803 CCACTAGAGGGGGAAGCCAT 60.696 60.000 0.00 0.00 0.00 4.40
91 92 1.216990 CACTAGAGGGGGAAGCCATT 58.783 55.000 0.00 0.00 0.00 3.16
92 93 1.133976 CACTAGAGGGGGAAGCCATTG 60.134 57.143 0.00 0.00 0.00 2.82
93 94 0.179006 CTAGAGGGGGAAGCCATTGC 60.179 60.000 0.00 0.00 37.95 3.56
94 95 1.645402 TAGAGGGGGAAGCCATTGCC 61.645 60.000 0.00 0.00 45.80 4.52
98 99 3.200522 GGGAAGCCATTGCCGAAG 58.799 61.111 0.00 0.00 37.15 3.79
113 114 3.371087 GAAGGCCTCTTCATCGACC 57.629 57.895 5.23 0.00 46.45 4.79
114 115 0.827368 GAAGGCCTCTTCATCGACCT 59.173 55.000 5.23 0.00 46.45 3.85
115 116 1.208293 GAAGGCCTCTTCATCGACCTT 59.792 52.381 5.23 0.00 46.45 3.50
116 117 0.539051 AGGCCTCTTCATCGACCTTG 59.461 55.000 0.00 0.00 0.00 3.61
117 118 0.250513 GGCCTCTTCATCGACCTTGT 59.749 55.000 0.00 0.00 0.00 3.16
118 119 1.339151 GGCCTCTTCATCGACCTTGTT 60.339 52.381 0.00 0.00 0.00 2.83
119 120 1.734465 GCCTCTTCATCGACCTTGTTG 59.266 52.381 0.00 0.00 0.00 3.33
120 121 1.734465 CCTCTTCATCGACCTTGTTGC 59.266 52.381 0.00 0.00 0.00 4.17
121 122 1.734465 CTCTTCATCGACCTTGTTGCC 59.266 52.381 0.00 0.00 0.00 4.52
122 123 1.347707 TCTTCATCGACCTTGTTGCCT 59.652 47.619 0.00 0.00 0.00 4.75
123 124 1.734465 CTTCATCGACCTTGTTGCCTC 59.266 52.381 0.00 0.00 0.00 4.70
124 125 0.036388 TCATCGACCTTGTTGCCTCC 60.036 55.000 0.00 0.00 0.00 4.30
125 126 0.321564 CATCGACCTTGTTGCCTCCA 60.322 55.000 0.00 0.00 0.00 3.86
126 127 0.620556 ATCGACCTTGTTGCCTCCAT 59.379 50.000 0.00 0.00 0.00 3.41
127 128 0.321564 TCGACCTTGTTGCCTCCATG 60.322 55.000 0.00 0.00 0.00 3.66
128 129 0.321564 CGACCTTGTTGCCTCCATGA 60.322 55.000 0.00 0.00 0.00 3.07
129 130 1.168714 GACCTTGTTGCCTCCATGAC 58.831 55.000 0.00 0.00 0.00 3.06
130 131 0.251341 ACCTTGTTGCCTCCATGACC 60.251 55.000 0.00 0.00 0.00 4.02
131 132 0.251297 CCTTGTTGCCTCCATGACCA 60.251 55.000 0.00 0.00 0.00 4.02
132 133 1.617804 CCTTGTTGCCTCCATGACCAT 60.618 52.381 0.00 0.00 0.00 3.55
133 134 1.475280 CTTGTTGCCTCCATGACCATG 59.525 52.381 0.00 3.11 38.51 3.66
134 135 0.405198 TGTTGCCTCCATGACCATGT 59.595 50.000 8.93 0.00 37.11 3.21
135 136 1.632920 TGTTGCCTCCATGACCATGTA 59.367 47.619 8.93 0.00 37.11 2.29
136 137 2.241941 TGTTGCCTCCATGACCATGTAT 59.758 45.455 8.93 0.00 37.11 2.29
137 138 3.290710 GTTGCCTCCATGACCATGTATT 58.709 45.455 8.93 0.00 37.11 1.89
138 139 4.080072 TGTTGCCTCCATGACCATGTATTA 60.080 41.667 8.93 0.00 37.11 0.98
139 140 4.085357 TGCCTCCATGACCATGTATTAC 57.915 45.455 8.93 0.00 37.11 1.89
140 141 3.716353 TGCCTCCATGACCATGTATTACT 59.284 43.478 8.93 0.00 37.11 2.24
141 142 4.904853 TGCCTCCATGACCATGTATTACTA 59.095 41.667 8.93 0.00 37.11 1.82
142 143 5.012046 TGCCTCCATGACCATGTATTACTAG 59.988 44.000 8.93 0.00 37.11 2.57
143 144 5.012148 GCCTCCATGACCATGTATTACTAGT 59.988 44.000 0.00 0.00 37.11 2.57
144 145 6.464465 GCCTCCATGACCATGTATTACTAGTT 60.464 42.308 0.00 0.00 37.11 2.24
145 146 7.256190 GCCTCCATGACCATGTATTACTAGTTA 60.256 40.741 0.00 0.00 37.11 2.24
146 147 8.088981 CCTCCATGACCATGTATTACTAGTTAC 58.911 40.741 0.00 0.00 37.11 2.50
147 148 8.777578 TCCATGACCATGTATTACTAGTTACT 57.222 34.615 0.00 0.00 37.11 2.24
148 149 9.209048 TCCATGACCATGTATTACTAGTTACTT 57.791 33.333 0.00 0.00 37.11 2.24
149 150 9.832445 CCATGACCATGTATTACTAGTTACTTT 57.168 33.333 0.00 0.00 37.11 2.66
155 156 9.978044 CCATGTATTACTAGTTACTTTAGGACC 57.022 37.037 0.00 0.00 0.00 4.46
161 162 8.773033 TTACTAGTTACTTTAGGACCTATGGG 57.227 38.462 0.00 0.00 38.88 4.00
179 180 5.862422 ATGGGTCCATAGTAGTAGCTAGA 57.138 43.478 0.00 0.00 34.49 2.43
180 181 5.862422 TGGGTCCATAGTAGTAGCTAGAT 57.138 43.478 0.00 0.00 0.00 1.98
181 182 5.571285 TGGGTCCATAGTAGTAGCTAGATG 58.429 45.833 0.00 0.00 0.00 2.90
182 183 4.951094 GGGTCCATAGTAGTAGCTAGATGG 59.049 50.000 0.00 3.16 34.47 3.51
183 184 5.516945 GGGTCCATAGTAGTAGCTAGATGGT 60.517 48.000 13.90 0.00 34.64 3.55
184 185 6.011481 GGTCCATAGTAGTAGCTAGATGGTT 58.989 44.000 13.90 0.00 34.64 3.67
185 186 6.151480 GGTCCATAGTAGTAGCTAGATGGTTC 59.849 46.154 13.90 10.27 34.64 3.62
186 187 6.151480 GTCCATAGTAGTAGCTAGATGGTTCC 59.849 46.154 13.90 0.00 34.64 3.62
187 188 5.124138 CCATAGTAGTAGCTAGATGGTTCCG 59.876 48.000 0.00 0.00 31.30 4.30
188 189 4.167652 AGTAGTAGCTAGATGGTTCCGT 57.832 45.455 0.00 0.00 0.00 4.69
189 190 4.136051 AGTAGTAGCTAGATGGTTCCGTC 58.864 47.826 0.00 3.08 0.00 4.79
190 191 3.300239 AGTAGCTAGATGGTTCCGTCT 57.700 47.619 16.40 16.40 36.43 4.18
191 192 3.215975 AGTAGCTAGATGGTTCCGTCTC 58.784 50.000 15.75 4.62 34.54 3.36
192 193 2.445682 AGCTAGATGGTTCCGTCTCT 57.554 50.000 15.75 6.65 34.54 3.10
193 194 2.303175 AGCTAGATGGTTCCGTCTCTC 58.697 52.381 15.75 9.67 34.54 3.20
194 195 2.092103 AGCTAGATGGTTCCGTCTCTCT 60.092 50.000 15.75 11.44 34.54 3.10
195 196 2.691011 GCTAGATGGTTCCGTCTCTCTT 59.309 50.000 15.75 0.00 34.54 2.85
196 197 3.131400 GCTAGATGGTTCCGTCTCTCTTT 59.869 47.826 15.75 0.00 34.54 2.52
197 198 4.382147 GCTAGATGGTTCCGTCTCTCTTTT 60.382 45.833 15.75 0.00 34.54 2.27
198 199 3.931578 AGATGGTTCCGTCTCTCTTTTG 58.068 45.455 7.67 0.00 0.00 2.44
199 200 2.543777 TGGTTCCGTCTCTCTTTTGG 57.456 50.000 0.00 0.00 0.00 3.28
200 201 2.043992 TGGTTCCGTCTCTCTTTTGGA 58.956 47.619 0.00 0.00 0.00 3.53
201 202 2.637872 TGGTTCCGTCTCTCTTTTGGAT 59.362 45.455 0.00 0.00 0.00 3.41
202 203 3.263261 GGTTCCGTCTCTCTTTTGGATC 58.737 50.000 0.00 0.00 0.00 3.36
203 204 3.055747 GGTTCCGTCTCTCTTTTGGATCT 60.056 47.826 0.00 0.00 0.00 2.75
204 205 4.563786 GGTTCCGTCTCTCTTTTGGATCTT 60.564 45.833 0.00 0.00 0.00 2.40
205 206 4.457834 TCCGTCTCTCTTTTGGATCTTC 57.542 45.455 0.00 0.00 0.00 2.87
206 207 3.832490 TCCGTCTCTCTTTTGGATCTTCA 59.168 43.478 0.00 0.00 0.00 3.02
207 208 4.283467 TCCGTCTCTCTTTTGGATCTTCAA 59.717 41.667 0.00 0.00 0.00 2.69
208 209 5.046304 TCCGTCTCTCTTTTGGATCTTCAAT 60.046 40.000 0.00 0.00 0.00 2.57
209 210 6.154534 TCCGTCTCTCTTTTGGATCTTCAATA 59.845 38.462 0.00 0.00 0.00 1.90
210 211 6.256757 CCGTCTCTCTTTTGGATCTTCAATAC 59.743 42.308 0.00 0.00 0.00 1.89
211 212 6.256757 CGTCTCTCTTTTGGATCTTCAATACC 59.743 42.308 0.00 0.00 0.00 2.73
212 213 7.106239 GTCTCTCTTTTGGATCTTCAATACCA 58.894 38.462 0.00 0.00 0.00 3.25
213 214 7.772757 GTCTCTCTTTTGGATCTTCAATACCAT 59.227 37.037 0.00 0.00 32.31 3.55
214 215 7.772292 TCTCTCTTTTGGATCTTCAATACCATG 59.228 37.037 0.00 0.00 32.31 3.66
215 216 7.405292 TCTCTTTTGGATCTTCAATACCATGT 58.595 34.615 0.00 0.00 32.31 3.21
216 217 7.890127 TCTCTTTTGGATCTTCAATACCATGTT 59.110 33.333 0.00 0.00 32.31 2.71
217 218 8.055279 TCTTTTGGATCTTCAATACCATGTTC 57.945 34.615 0.00 0.00 32.31 3.18
218 219 7.890127 TCTTTTGGATCTTCAATACCATGTTCT 59.110 33.333 0.00 0.00 32.31 3.01
219 220 7.630242 TTTGGATCTTCAATACCATGTTCTC 57.370 36.000 0.00 0.00 32.31 2.87
220 221 5.359756 TGGATCTTCAATACCATGTTCTCG 58.640 41.667 0.00 0.00 0.00 4.04
221 222 5.104941 TGGATCTTCAATACCATGTTCTCGT 60.105 40.000 0.00 0.00 0.00 4.18
222 223 5.817816 GGATCTTCAATACCATGTTCTCGTT 59.182 40.000 0.00 0.00 0.00 3.85
223 224 6.018669 GGATCTTCAATACCATGTTCTCGTTC 60.019 42.308 0.00 0.00 0.00 3.95
224 225 6.037786 TCTTCAATACCATGTTCTCGTTCT 57.962 37.500 0.00 0.00 0.00 3.01
225 226 6.464222 TCTTCAATACCATGTTCTCGTTCTT 58.536 36.000 0.00 0.00 0.00 2.52
226 227 6.368791 TCTTCAATACCATGTTCTCGTTCTTG 59.631 38.462 0.00 0.00 0.00 3.02
227 228 5.789521 TCAATACCATGTTCTCGTTCTTGA 58.210 37.500 0.00 0.00 0.00 3.02
228 229 6.406370 TCAATACCATGTTCTCGTTCTTGAT 58.594 36.000 0.00 0.00 0.00 2.57
229 230 6.535150 TCAATACCATGTTCTCGTTCTTGATC 59.465 38.462 0.00 0.00 0.00 2.92
230 231 3.254060 ACCATGTTCTCGTTCTTGATCG 58.746 45.455 0.00 0.00 0.00 3.69
231 232 3.056821 ACCATGTTCTCGTTCTTGATCGA 60.057 43.478 0.00 0.00 34.88 3.59
254 255 8.664798 TCGAGATCAATTTAATGTAAACAGTGG 58.335 33.333 0.00 0.00 0.00 4.00
255 256 8.450964 CGAGATCAATTTAATGTAAACAGTGGT 58.549 33.333 0.00 0.00 0.00 4.16
256 257 9.559958 GAGATCAATTTAATGTAAACAGTGGTG 57.440 33.333 0.00 0.00 0.00 4.17
257 258 9.077885 AGATCAATTTAATGTAAACAGTGGTGT 57.922 29.630 0.00 0.00 39.19 4.16
267 268 2.223803 ACAGTGGTGTTTTGTTGGGA 57.776 45.000 0.00 0.00 30.30 4.37
268 269 1.822371 ACAGTGGTGTTTTGTTGGGAC 59.178 47.619 0.00 0.00 30.30 4.46
269 270 1.821753 CAGTGGTGTTTTGTTGGGACA 59.178 47.619 0.00 0.00 0.00 4.02
270 271 2.430332 CAGTGGTGTTTTGTTGGGACAT 59.570 45.455 0.00 0.00 39.30 3.06
271 272 2.430332 AGTGGTGTTTTGTTGGGACATG 59.570 45.455 0.00 0.00 39.30 3.21
272 273 2.428890 GTGGTGTTTTGTTGGGACATGA 59.571 45.455 0.00 0.00 39.30 3.07
273 274 3.069443 GTGGTGTTTTGTTGGGACATGAT 59.931 43.478 0.00 0.00 39.30 2.45
274 275 3.069300 TGGTGTTTTGTTGGGACATGATG 59.931 43.478 0.00 0.00 39.30 3.07
275 276 3.320541 GGTGTTTTGTTGGGACATGATGA 59.679 43.478 0.00 0.00 39.30 2.92
276 277 4.202202 GGTGTTTTGTTGGGACATGATGAA 60.202 41.667 0.00 0.00 39.30 2.57
277 278 5.511202 GGTGTTTTGTTGGGACATGATGAAT 60.511 40.000 0.00 0.00 39.30 2.57
278 279 5.990996 GTGTTTTGTTGGGACATGATGAATT 59.009 36.000 0.00 0.00 39.30 2.17
279 280 5.990386 TGTTTTGTTGGGACATGATGAATTG 59.010 36.000 0.00 0.00 39.30 2.32
280 281 5.804944 TTTGTTGGGACATGATGAATTGT 57.195 34.783 0.00 0.00 39.30 2.71
281 282 5.389859 TTGTTGGGACATGATGAATTGTC 57.610 39.130 0.00 0.00 39.30 3.18
282 283 4.405548 TGTTGGGACATGATGAATTGTCA 58.594 39.130 0.00 0.00 43.20 3.58
283 284 4.218200 TGTTGGGACATGATGAATTGTCAC 59.782 41.667 0.00 2.19 44.72 3.67
284 285 4.305539 TGGGACATGATGAATTGTCACT 57.694 40.909 0.00 0.00 44.75 3.41
285 286 4.665451 TGGGACATGATGAATTGTCACTT 58.335 39.130 0.00 0.00 44.75 3.16
286 287 5.078949 TGGGACATGATGAATTGTCACTTT 58.921 37.500 0.00 0.00 44.75 2.66
287 288 5.047872 TGGGACATGATGAATTGTCACTTTG 60.048 40.000 0.00 0.00 44.75 2.77
288 289 5.047802 GGGACATGATGAATTGTCACTTTGT 60.048 40.000 0.00 0.00 41.92 2.83
289 290 5.860182 GGACATGATGAATTGTCACTTTGTG 59.140 40.000 0.00 0.00 43.20 3.33
290 291 6.294120 GGACATGATGAATTGTCACTTTGTGA 60.294 38.462 0.00 0.00 43.20 3.58
291 292 7.223260 ACATGATGAATTGTCACTTTGTGAT 57.777 32.000 0.00 0.00 44.63 3.06
292 293 7.663827 ACATGATGAATTGTCACTTTGTGATT 58.336 30.769 0.00 0.00 44.63 2.57
293 294 8.795513 ACATGATGAATTGTCACTTTGTGATTA 58.204 29.630 0.00 0.00 44.63 1.75
294 295 9.285770 CATGATGAATTGTCACTTTGTGATTAG 57.714 33.333 3.65 0.00 44.63 1.73
295 296 8.620116 TGATGAATTGTCACTTTGTGATTAGA 57.380 30.769 3.65 0.00 44.63 2.10
296 297 9.234827 TGATGAATTGTCACTTTGTGATTAGAT 57.765 29.630 3.65 0.00 44.63 1.98
298 299 9.850628 ATGAATTGTCACTTTGTGATTAGATTG 57.149 29.630 3.65 0.00 44.63 2.67
299 300 8.849168 TGAATTGTCACTTTGTGATTAGATTGT 58.151 29.630 3.65 0.00 44.63 2.71
300 301 9.683069 GAATTGTCACTTTGTGATTAGATTGTT 57.317 29.630 3.65 0.00 44.63 2.83
301 302 9.683069 AATTGTCACTTTGTGATTAGATTGTTC 57.317 29.630 3.65 0.00 44.63 3.18
302 303 7.800155 TGTCACTTTGTGATTAGATTGTTCA 57.200 32.000 3.65 0.00 44.63 3.18
303 304 8.394971 TGTCACTTTGTGATTAGATTGTTCAT 57.605 30.769 3.65 0.00 44.63 2.57
304 305 8.849168 TGTCACTTTGTGATTAGATTGTTCATT 58.151 29.630 3.65 0.00 44.63 2.57
387 388 9.206870 CTCTTTGATCTATCTATCTTCTTTGGC 57.793 37.037 0.00 0.00 0.00 4.52
388 389 8.153550 TCTTTGATCTATCTATCTTCTTTGGCC 58.846 37.037 0.00 0.00 0.00 5.36
389 390 7.379059 TTGATCTATCTATCTTCTTTGGCCA 57.621 36.000 0.00 0.00 0.00 5.36
390 391 7.379059 TGATCTATCTATCTTCTTTGGCCAA 57.621 36.000 16.05 16.05 0.00 4.52
391 392 7.448420 TGATCTATCTATCTTCTTTGGCCAAG 58.552 38.462 19.48 12.99 0.00 3.61
392 393 6.814954 TCTATCTATCTTCTTTGGCCAAGT 57.185 37.500 19.48 4.72 33.66 3.16
393 394 7.200434 TCTATCTATCTTCTTTGGCCAAGTT 57.800 36.000 19.48 4.62 33.66 2.66
394 395 7.275920 TCTATCTATCTTCTTTGGCCAAGTTC 58.724 38.462 19.48 0.00 33.66 3.01
395 396 5.241403 TCTATCTTCTTTGGCCAAGTTCA 57.759 39.130 19.48 2.39 33.66 3.18
396 397 5.630121 TCTATCTTCTTTGGCCAAGTTCAA 58.370 37.500 19.48 9.01 33.66 2.69
397 398 6.248433 TCTATCTTCTTTGGCCAAGTTCAAT 58.752 36.000 19.48 13.09 33.66 2.57
398 399 4.853924 TCTTCTTTGGCCAAGTTCAATC 57.146 40.909 19.48 0.00 33.66 2.67
399 400 3.253188 TCTTCTTTGGCCAAGTTCAATCG 59.747 43.478 19.48 3.60 33.66 3.34
400 401 2.857483 TCTTTGGCCAAGTTCAATCGA 58.143 42.857 19.48 0.00 33.66 3.59
401 402 3.420893 TCTTTGGCCAAGTTCAATCGAT 58.579 40.909 19.48 0.00 33.66 3.59
402 403 3.826157 TCTTTGGCCAAGTTCAATCGATT 59.174 39.130 19.48 4.39 33.66 3.34
403 404 4.280677 TCTTTGGCCAAGTTCAATCGATTT 59.719 37.500 19.48 0.00 33.66 2.17
404 405 5.475220 TCTTTGGCCAAGTTCAATCGATTTA 59.525 36.000 19.48 0.00 33.66 1.40
405 406 5.913137 TTGGCCAAGTTCAATCGATTTAT 57.087 34.783 16.05 0.00 0.00 1.40
406 407 5.499139 TGGCCAAGTTCAATCGATTTATC 57.501 39.130 8.21 0.00 0.00 1.75
407 408 5.192927 TGGCCAAGTTCAATCGATTTATCT 58.807 37.500 8.21 2.42 0.00 1.98
408 409 5.652014 TGGCCAAGTTCAATCGATTTATCTT 59.348 36.000 8.21 8.71 0.00 2.40
409 410 6.183360 TGGCCAAGTTCAATCGATTTATCTTC 60.183 38.462 8.21 1.46 0.00 2.87
410 411 6.183360 GGCCAAGTTCAATCGATTTATCTTCA 60.183 38.462 8.21 0.00 0.00 3.02
411 412 6.909357 GCCAAGTTCAATCGATTTATCTTCAG 59.091 38.462 8.21 6.62 0.00 3.02
412 413 7.414540 GCCAAGTTCAATCGATTTATCTTCAGT 60.415 37.037 8.21 0.00 0.00 3.41
413 414 7.907045 CCAAGTTCAATCGATTTATCTTCAGTG 59.093 37.037 8.21 1.19 0.00 3.66
414 415 8.446273 CAAGTTCAATCGATTTATCTTCAGTGT 58.554 33.333 8.21 0.00 0.00 3.55
415 416 9.653287 AAGTTCAATCGATTTATCTTCAGTGTA 57.347 29.630 8.21 0.00 0.00 2.90
416 417 9.653287 AGTTCAATCGATTTATCTTCAGTGTAA 57.347 29.630 8.21 0.00 0.00 2.41
417 418 9.907576 GTTCAATCGATTTATCTTCAGTGTAAG 57.092 33.333 8.21 0.00 0.00 2.34
418 419 9.869757 TTCAATCGATTTATCTTCAGTGTAAGA 57.130 29.630 8.21 7.26 39.71 2.10
419 420 9.521503 TCAATCGATTTATCTTCAGTGTAAGAG 57.478 33.333 8.21 0.00 38.81 2.85
420 421 8.759641 CAATCGATTTATCTTCAGTGTAAGAGG 58.240 37.037 8.21 0.00 38.81 3.69
421 422 7.406031 TCGATTTATCTTCAGTGTAAGAGGT 57.594 36.000 9.75 0.19 38.81 3.85
422 423 7.258441 TCGATTTATCTTCAGTGTAAGAGGTG 58.742 38.462 9.75 0.00 38.81 4.00
423 424 6.019479 CGATTTATCTTCAGTGTAAGAGGTGC 60.019 42.308 9.75 0.00 38.81 5.01
424 425 6.360370 TTTATCTTCAGTGTAAGAGGTGCT 57.640 37.500 9.75 0.00 38.81 4.40
425 426 4.899352 ATCTTCAGTGTAAGAGGTGCTT 57.101 40.909 9.75 0.00 38.81 3.91
426 427 4.689612 TCTTCAGTGTAAGAGGTGCTTT 57.310 40.909 0.00 0.00 38.05 3.51
427 428 4.380531 TCTTCAGTGTAAGAGGTGCTTTG 58.619 43.478 0.00 0.00 38.05 2.77
428 429 3.838244 TCAGTGTAAGAGGTGCTTTGT 57.162 42.857 0.00 0.00 38.05 2.83
429 430 4.948341 TCAGTGTAAGAGGTGCTTTGTA 57.052 40.909 0.00 0.00 38.05 2.41
430 431 4.883083 TCAGTGTAAGAGGTGCTTTGTAG 58.117 43.478 0.00 0.00 38.05 2.74
431 432 4.344102 TCAGTGTAAGAGGTGCTTTGTAGT 59.656 41.667 0.00 0.00 38.05 2.73
432 433 4.449068 CAGTGTAAGAGGTGCTTTGTAGTG 59.551 45.833 0.00 0.00 38.05 2.74
433 434 3.746492 GTGTAAGAGGTGCTTTGTAGTGG 59.254 47.826 0.00 0.00 38.05 4.00
434 435 2.568623 AAGAGGTGCTTTGTAGTGGG 57.431 50.000 0.00 0.00 31.11 4.61
435 436 1.435256 AGAGGTGCTTTGTAGTGGGT 58.565 50.000 0.00 0.00 0.00 4.51
436 437 1.774856 AGAGGTGCTTTGTAGTGGGTT 59.225 47.619 0.00 0.00 0.00 4.11
437 438 2.152016 GAGGTGCTTTGTAGTGGGTTC 58.848 52.381 0.00 0.00 0.00 3.62
438 439 1.493022 AGGTGCTTTGTAGTGGGTTCA 59.507 47.619 0.00 0.00 0.00 3.18
439 440 2.092103 AGGTGCTTTGTAGTGGGTTCAA 60.092 45.455 0.00 0.00 0.00 2.69
440 441 2.890945 GGTGCTTTGTAGTGGGTTCAAT 59.109 45.455 0.00 0.00 0.00 2.57
441 442 3.057526 GGTGCTTTGTAGTGGGTTCAATC 60.058 47.826 0.00 0.00 0.00 2.67
442 443 3.821033 GTGCTTTGTAGTGGGTTCAATCT 59.179 43.478 0.00 0.00 0.00 2.40
443 444 4.278419 GTGCTTTGTAGTGGGTTCAATCTT 59.722 41.667 0.00 0.00 0.00 2.40
444 445 4.278170 TGCTTTGTAGTGGGTTCAATCTTG 59.722 41.667 0.00 0.00 0.00 3.02
445 446 4.278419 GCTTTGTAGTGGGTTCAATCTTGT 59.722 41.667 0.00 0.00 0.00 3.16
446 447 5.762045 CTTTGTAGTGGGTTCAATCTTGTG 58.238 41.667 0.00 0.00 0.00 3.33
447 448 3.750371 TGTAGTGGGTTCAATCTTGTGG 58.250 45.455 0.00 0.00 0.00 4.17
448 449 3.137544 TGTAGTGGGTTCAATCTTGTGGT 59.862 43.478 0.00 0.00 0.00 4.16
449 450 2.586425 AGTGGGTTCAATCTTGTGGTG 58.414 47.619 0.00 0.00 0.00 4.17
450 451 1.000274 GTGGGTTCAATCTTGTGGTGC 60.000 52.381 0.00 0.00 0.00 5.01
451 452 1.133513 TGGGTTCAATCTTGTGGTGCT 60.134 47.619 0.00 0.00 0.00 4.40
452 453 1.541588 GGGTTCAATCTTGTGGTGCTC 59.458 52.381 0.00 0.00 0.00 4.26
453 454 2.508526 GGTTCAATCTTGTGGTGCTCT 58.491 47.619 0.00 0.00 0.00 4.09
454 455 3.559171 GGGTTCAATCTTGTGGTGCTCTA 60.559 47.826 0.00 0.00 0.00 2.43
455 456 4.072131 GGTTCAATCTTGTGGTGCTCTAA 58.928 43.478 0.00 0.00 0.00 2.10
456 457 4.083271 GGTTCAATCTTGTGGTGCTCTAAC 60.083 45.833 0.00 0.00 0.00 2.34
457 458 3.674997 TCAATCTTGTGGTGCTCTAACC 58.325 45.455 0.00 0.00 40.94 2.85
458 459 2.749621 CAATCTTGTGGTGCTCTAACCC 59.250 50.000 0.00 0.00 39.70 4.11
459 460 1.429930 TCTTGTGGTGCTCTAACCCA 58.570 50.000 0.00 0.00 39.70 4.51
460 461 1.347707 TCTTGTGGTGCTCTAACCCAG 59.652 52.381 0.00 0.00 39.70 4.45
569 570 6.143206 TGTCCCACCTAATGAGATCTAATGA 58.857 40.000 0.00 0.00 0.00 2.57
678 679 2.888447 CGATCTGGATCAGGCCCCC 61.888 68.421 0.00 0.00 37.69 5.40
913 921 1.451028 GGCTCGCTGCATTCTTCCT 60.451 57.895 0.00 0.00 45.15 3.36
974 982 4.069232 CGAGGAGGCGGCTGTGAA 62.069 66.667 19.63 0.00 0.00 3.18
990 998 2.059541 GTGAAGTACACGTTCTGGAGC 58.940 52.381 0.00 0.00 39.78 4.70
991 999 1.961394 TGAAGTACACGTTCTGGAGCT 59.039 47.619 0.00 0.00 0.00 4.09
1045 1054 1.975327 CTCTTTCTGGAGGCCGACA 59.025 57.895 0.00 0.00 0.00 4.35
1057 1066 1.214589 GCCGACACCGCTCTTTCTA 59.785 57.895 0.00 0.00 0.00 2.10
1152 1177 3.098555 GGCATCGATTCGCCGTTT 58.901 55.556 10.68 0.00 38.82 3.60
1153 1178 1.297598 GGCATCGATTCGCCGTTTG 60.298 57.895 10.68 0.00 38.82 2.93
1154 1179 1.297598 GCATCGATTCGCCGTTTGG 60.298 57.895 0.00 0.00 38.77 3.28
1201 1226 3.615496 GCTACAAAAGATGCAGCAATTGG 59.385 43.478 19.46 8.55 46.05 3.16
1248 1273 2.286523 CCCCTCGCACAGTTCCTCT 61.287 63.158 0.00 0.00 0.00 3.69
1301 1326 6.284459 TGTAATATGGCATCGTGTATGTGAA 58.716 36.000 1.65 0.00 37.93 3.18
1306 1331 4.702831 TGGCATCGTGTATGTGAATATGT 58.297 39.130 0.00 0.00 37.93 2.29
1310 1335 6.589907 GGCATCGTGTATGTGAATATGTGATA 59.410 38.462 0.00 0.00 37.93 2.15
1380 1405 4.141181 TGCATCCCATAAAGCCATAACTCT 60.141 41.667 0.00 0.00 0.00 3.24
1382 1407 5.302823 GCATCCCATAAAGCCATAACTCTTT 59.697 40.000 0.00 0.00 36.58 2.52
1401 1426 2.975732 TCCTGCAATCTAGCTCACAG 57.024 50.000 0.00 0.00 34.99 3.66
1672 1783 3.749665 TTGGGCCTCTTTTTGTCAATG 57.250 42.857 4.53 0.00 0.00 2.82
1675 1786 2.289010 GGGCCTCTTTTTGTCAATGTGG 60.289 50.000 0.84 0.00 0.00 4.17
1735 1847 2.496470 GTCCTCACCCTACAGTACTTGG 59.504 54.545 0.00 0.00 0.00 3.61
1781 1893 6.409704 TGCTATCTCAGGTTATATTGGATGC 58.590 40.000 0.00 0.00 0.00 3.91
1933 2047 1.848388 TCAAGCCCCATCATCTGACAT 59.152 47.619 0.00 0.00 0.00 3.06
1945 2059 7.225538 CCCATCATCTGACATTTCTGTAGTAAC 59.774 40.741 0.00 0.00 35.14 2.50
2057 2172 7.775053 AAGTATAGAAGATTTGCCAAACCAA 57.225 32.000 0.00 0.00 0.00 3.67
2289 2408 3.884895 TGTGTGTGTTGAGGTCAATCTT 58.115 40.909 0.00 0.00 38.24 2.40
2297 2416 5.763204 GTGTTGAGGTCAATCTTAGTTTGGA 59.237 40.000 3.57 0.00 38.24 3.53
2303 2422 6.126409 AGGTCAATCTTAGTTTGGAACACAA 58.874 36.000 3.57 0.00 39.29 3.33
2312 2431 7.665559 TCTTAGTTTGGAACACAATAGAGCAAT 59.334 33.333 0.00 0.00 39.29 3.56
2327 2528 3.014304 AGCAATGGTGATCAGCTCATT 57.986 42.857 24.30 16.86 35.97 2.57
2328 2529 2.950309 AGCAATGGTGATCAGCTCATTC 59.050 45.455 24.30 13.56 35.97 2.67
2396 2597 9.523168 GTCACTAGATACAAATATAGTCCCTCT 57.477 37.037 0.00 0.00 37.91 3.69
2413 2614 8.840200 AGTCCCTCTGTTTCTAAATATGAGTA 57.160 34.615 0.00 0.00 0.00 2.59
2415 2616 9.482627 GTCCCTCTGTTTCTAAATATGAGTATG 57.517 37.037 0.00 0.00 0.00 2.39
2416 2617 8.651389 TCCCTCTGTTTCTAAATATGAGTATGG 58.349 37.037 0.00 0.00 0.00 2.74
2417 2618 8.651389 CCCTCTGTTTCTAAATATGAGTATGGA 58.349 37.037 0.00 0.00 0.00 3.41
2418 2619 9.482627 CCTCTGTTTCTAAATATGAGTATGGAC 57.517 37.037 0.00 0.00 0.00 4.02
2489 2707 5.034797 TCACTCATTTCGCTTCGTATGTAG 58.965 41.667 0.00 0.00 0.00 2.74
2550 2768 1.508256 AGGGAGTACTACATTGGGCC 58.492 55.000 7.57 0.00 0.00 5.80
2595 2813 8.375608 TCTTATCACGTATAGAGGTTCAGTAC 57.624 38.462 0.00 0.00 0.00 2.73
2602 2820 6.432162 ACGTATAGAGGTTCAGTACAGTTTGA 59.568 38.462 0.00 0.00 0.00 2.69
2617 2835 3.817084 CAGTTTGAAGCTGACAAGATCCA 59.183 43.478 2.64 0.00 36.12 3.41
2621 2839 7.496920 CAGTTTGAAGCTGACAAGATCCATATA 59.503 37.037 2.64 0.00 36.12 0.86
2631 2849 6.539826 TGACAAGATCCATATAACTTGCACTG 59.460 38.462 0.00 0.00 42.00 3.66
2676 2894 7.870954 CCACACTTACTGTTATCACTAAACTGA 59.129 37.037 0.00 0.00 32.15 3.41
2851 3069 6.428465 TGTTCTAAACTGTTGAATCGCCATAA 59.572 34.615 0.00 0.00 0.00 1.90
2872 3090 7.333921 CCATAAGGGAGATAGTAGTGTAGTACG 59.666 44.444 0.00 0.00 40.01 3.67
2881 3099 8.654997 AGATAGTAGTGTAGTACGGAGGAAATA 58.345 37.037 0.00 0.00 0.00 1.40
2882 3100 9.277783 GATAGTAGTGTAGTACGGAGGAAATAA 57.722 37.037 0.00 0.00 0.00 1.40
2883 3101 9.804977 ATAGTAGTGTAGTACGGAGGAAATAAT 57.195 33.333 0.00 0.00 0.00 1.28
2884 3102 8.164058 AGTAGTGTAGTACGGAGGAAATAATC 57.836 38.462 0.00 0.00 0.00 1.75
2900 3118 7.675478 GGAAATAATCCTCGAATTTTGTTTGC 58.325 34.615 0.00 0.00 45.56 3.68
2901 3119 7.330700 GGAAATAATCCTCGAATTTTGTTTGCA 59.669 33.333 8.53 0.00 45.56 4.08
2902 3120 8.600449 AAATAATCCTCGAATTTTGTTTGCAA 57.400 26.923 0.00 0.00 0.00 4.08
2903 3121 7.816945 ATAATCCTCGAATTTTGTTTGCAAG 57.183 32.000 0.00 0.00 35.82 4.01
2904 3122 3.976169 TCCTCGAATTTTGTTTGCAAGG 58.024 40.909 0.00 0.00 35.82 3.61
2905 3123 2.476241 CCTCGAATTTTGTTTGCAAGGC 59.524 45.455 0.00 0.00 35.82 4.35
2906 3124 3.122297 CTCGAATTTTGTTTGCAAGGCA 58.878 40.909 0.00 0.00 35.82 4.75
2907 3125 3.726607 TCGAATTTTGTTTGCAAGGCAT 58.273 36.364 0.00 0.00 38.76 4.40
2908 3126 3.493877 TCGAATTTTGTTTGCAAGGCATG 59.506 39.130 0.00 0.00 38.76 4.06
2909 3127 3.248125 CGAATTTTGTTTGCAAGGCATGT 59.752 39.130 0.00 0.00 38.76 3.21
2910 3128 4.447054 CGAATTTTGTTTGCAAGGCATGTA 59.553 37.500 0.00 0.00 38.76 2.29
2911 3129 5.612276 CGAATTTTGTTTGCAAGGCATGTAC 60.612 40.000 0.00 0.00 38.76 2.90
2912 3130 4.399004 TTTTGTTTGCAAGGCATGTACT 57.601 36.364 0.00 0.00 38.76 2.73
2913 3131 3.367992 TTGTTTGCAAGGCATGTACTG 57.632 42.857 0.00 0.00 38.76 2.74
2914 3132 2.580962 TGTTTGCAAGGCATGTACTGA 58.419 42.857 0.00 0.00 38.76 3.41
2915 3133 3.156293 TGTTTGCAAGGCATGTACTGAT 58.844 40.909 0.00 0.00 38.76 2.90
2916 3134 3.057386 TGTTTGCAAGGCATGTACTGATG 60.057 43.478 0.00 0.00 38.76 3.07
2917 3135 2.495155 TGCAAGGCATGTACTGATGT 57.505 45.000 0.00 0.00 31.71 3.06
2918 3136 2.358957 TGCAAGGCATGTACTGATGTC 58.641 47.619 0.00 0.00 31.71 3.06
2919 3137 2.290197 TGCAAGGCATGTACTGATGTCA 60.290 45.455 1.18 0.00 31.71 3.58
2920 3138 2.947652 GCAAGGCATGTACTGATGTCAT 59.052 45.455 1.18 0.00 29.77 3.06
2921 3139 3.379372 GCAAGGCATGTACTGATGTCATT 59.621 43.478 1.18 0.00 29.77 2.57
2922 3140 4.576053 GCAAGGCATGTACTGATGTCATTA 59.424 41.667 1.18 0.00 29.77 1.90
2923 3141 5.066375 GCAAGGCATGTACTGATGTCATTAA 59.934 40.000 1.18 0.00 29.77 1.40
2924 3142 6.238842 GCAAGGCATGTACTGATGTCATTAAT 60.239 38.462 1.18 0.00 29.77 1.40
2925 3143 7.682741 GCAAGGCATGTACTGATGTCATTAATT 60.683 37.037 1.18 0.00 29.77 1.40
2926 3144 7.886629 AGGCATGTACTGATGTCATTAATTT 57.113 32.000 1.18 0.00 29.77 1.82
2927 3145 7.709947 AGGCATGTACTGATGTCATTAATTTG 58.290 34.615 1.18 0.00 29.77 2.32
2928 3146 6.919662 GGCATGTACTGATGTCATTAATTTGG 59.080 38.462 0.00 0.00 0.00 3.28
2929 3147 6.418819 GCATGTACTGATGTCATTAATTTGGC 59.581 38.462 0.00 0.00 0.00 4.52
2930 3148 7.482474 CATGTACTGATGTCATTAATTTGGCA 58.518 34.615 0.00 0.00 35.34 4.92
2931 3149 7.643569 TGTACTGATGTCATTAATTTGGCAT 57.356 32.000 0.00 0.00 44.32 4.40
2932 3150 7.482474 TGTACTGATGTCATTAATTTGGCATG 58.518 34.615 2.00 0.00 41.82 4.06
2933 3151 5.353938 ACTGATGTCATTAATTTGGCATGC 58.646 37.500 9.90 9.90 41.82 4.06
2934 3152 5.105269 ACTGATGTCATTAATTTGGCATGCA 60.105 36.000 21.36 2.54 41.82 3.96
2935 3153 5.731591 TGATGTCATTAATTTGGCATGCAA 58.268 33.333 21.36 4.92 41.82 4.08
2936 3154 6.171213 TGATGTCATTAATTTGGCATGCAAA 58.829 32.000 21.36 12.68 41.82 3.68
2937 3155 6.314152 TGATGTCATTAATTTGGCATGCAAAG 59.686 34.615 21.36 1.26 41.82 2.77
2938 3156 5.549347 TGTCATTAATTTGGCATGCAAAGT 58.451 33.333 21.36 17.94 0.00 2.66
2939 3157 5.408909 TGTCATTAATTTGGCATGCAAAGTG 59.591 36.000 21.36 13.84 0.00 3.16
2940 3158 5.409214 GTCATTAATTTGGCATGCAAAGTGT 59.591 36.000 21.36 6.13 0.00 3.55
2941 3159 5.996513 TCATTAATTTGGCATGCAAAGTGTT 59.003 32.000 21.36 12.73 0.00 3.32
2942 3160 5.670149 TTAATTTGGCATGCAAAGTGTTG 57.330 34.783 21.36 0.00 37.83 3.33
2980 3198 9.973450 TGCAACTATTATTTTCTTGCAGTAAAA 57.027 25.926 9.78 9.78 41.67 1.52
3054 3272 9.398170 CATATAGCCAATTATTTTTGTCCTTCG 57.602 33.333 0.00 0.00 0.00 3.79
3055 3273 5.722021 AGCCAATTATTTTTGTCCTTCGT 57.278 34.783 0.00 0.00 0.00 3.85
3056 3274 6.827586 AGCCAATTATTTTTGTCCTTCGTA 57.172 33.333 0.00 0.00 0.00 3.43
3057 3275 7.222000 AGCCAATTATTTTTGTCCTTCGTAA 57.778 32.000 0.00 0.00 0.00 3.18
3058 3276 7.662897 AGCCAATTATTTTTGTCCTTCGTAAA 58.337 30.769 0.00 0.00 0.00 2.01
3059 3277 7.597369 AGCCAATTATTTTTGTCCTTCGTAAAC 59.403 33.333 0.00 0.00 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.111916 CGGCAGCGATAAAATTTTTGGAT 58.888 39.130 9.06 0.00 0.00 3.41
1 2 3.506810 CGGCAGCGATAAAATTTTTGGA 58.493 40.909 9.06 0.00 0.00 3.53
2 3 2.029124 GCGGCAGCGATAAAATTTTTGG 59.971 45.455 9.06 0.33 0.00 3.28
3 4 3.288243 GCGGCAGCGATAAAATTTTTG 57.712 42.857 9.06 1.99 0.00 2.44
26 27 1.485895 AGATCTCTTTGGAGCAGAGGC 59.514 52.381 0.00 0.00 38.71 4.70
27 28 2.765135 TGAGATCTCTTTGGAGCAGAGG 59.235 50.000 22.95 0.00 38.71 3.69
28 29 4.342951 AGATGAGATCTCTTTGGAGCAGAG 59.657 45.833 22.95 0.00 39.31 3.35
29 30 4.099727 CAGATGAGATCTCTTTGGAGCAGA 59.900 45.833 22.95 0.00 37.58 4.26
30 31 4.373527 CAGATGAGATCTCTTTGGAGCAG 58.626 47.826 22.95 0.00 37.58 4.24
31 32 3.134262 CCAGATGAGATCTCTTTGGAGCA 59.866 47.826 24.47 6.85 37.58 4.26
32 33 3.387374 TCCAGATGAGATCTCTTTGGAGC 59.613 47.826 26.02 11.56 37.58 4.70
33 34 4.501915 GCTCCAGATGAGATCTCTTTGGAG 60.502 50.000 35.82 35.82 44.42 3.86
34 35 3.387374 GCTCCAGATGAGATCTCTTTGGA 59.613 47.826 27.02 27.02 44.42 3.53
35 36 3.494749 GGCTCCAGATGAGATCTCTTTGG 60.495 52.174 22.95 23.30 44.42 3.28
36 37 3.494749 GGGCTCCAGATGAGATCTCTTTG 60.495 52.174 22.95 16.66 44.42 2.77
37 38 2.705127 GGGCTCCAGATGAGATCTCTTT 59.295 50.000 22.95 10.99 44.42 2.52
38 39 2.090606 AGGGCTCCAGATGAGATCTCTT 60.091 50.000 22.95 17.01 44.42 2.85
39 40 1.504660 AGGGCTCCAGATGAGATCTCT 59.495 52.381 22.95 9.13 44.42 3.10
40 41 2.014010 AGGGCTCCAGATGAGATCTC 57.986 55.000 16.21 16.21 44.42 2.75
41 42 3.839490 CAATAGGGCTCCAGATGAGATCT 59.161 47.826 0.00 0.00 44.42 2.75
42 43 3.619487 GCAATAGGGCTCCAGATGAGATC 60.619 52.174 0.00 0.00 44.42 2.75
43 44 2.305343 GCAATAGGGCTCCAGATGAGAT 59.695 50.000 0.00 0.00 44.42 2.75
44 45 1.696336 GCAATAGGGCTCCAGATGAGA 59.304 52.381 0.00 0.00 44.42 3.27
45 46 1.419012 TGCAATAGGGCTCCAGATGAG 59.581 52.381 0.00 0.00 44.47 2.90
46 47 1.510492 TGCAATAGGGCTCCAGATGA 58.490 50.000 0.00 0.00 34.04 2.92
47 48 2.353357 TTGCAATAGGGCTCCAGATG 57.647 50.000 0.00 0.00 34.04 2.90
48 49 3.386932 TTTTGCAATAGGGCTCCAGAT 57.613 42.857 0.00 0.00 34.04 2.90
49 50 2.897271 TTTTGCAATAGGGCTCCAGA 57.103 45.000 0.00 0.00 34.04 3.86
50 51 2.363359 GGATTTTGCAATAGGGCTCCAG 59.637 50.000 0.00 0.00 34.04 3.86
51 52 2.387757 GGATTTTGCAATAGGGCTCCA 58.612 47.619 0.00 0.00 34.04 3.86
52 53 1.688735 GGGATTTTGCAATAGGGCTCC 59.311 52.381 0.00 0.00 34.04 4.70
53 54 2.101415 GTGGGATTTTGCAATAGGGCTC 59.899 50.000 0.00 0.00 34.04 4.70
54 55 2.110578 GTGGGATTTTGCAATAGGGCT 58.889 47.619 0.00 0.00 34.04 5.19
55 56 2.110578 AGTGGGATTTTGCAATAGGGC 58.889 47.619 0.00 0.00 0.00 5.19
56 57 4.792068 TCTAGTGGGATTTTGCAATAGGG 58.208 43.478 0.00 0.00 0.00 3.53
57 58 4.823989 CCTCTAGTGGGATTTTGCAATAGG 59.176 45.833 0.00 0.00 0.00 2.57
70 71 2.073101 GGCTTCCCCCTCTAGTGGG 61.073 68.421 21.15 21.15 46.68 4.61
71 72 0.695803 ATGGCTTCCCCCTCTAGTGG 60.696 60.000 3.70 3.70 0.00 4.00
72 73 1.133976 CAATGGCTTCCCCCTCTAGTG 60.134 57.143 0.00 0.00 0.00 2.74
73 74 1.216990 CAATGGCTTCCCCCTCTAGT 58.783 55.000 0.00 0.00 0.00 2.57
74 75 0.179006 GCAATGGCTTCCCCCTCTAG 60.179 60.000 0.00 0.00 36.96 2.43
75 76 1.645402 GGCAATGGCTTCCCCCTCTA 61.645 60.000 0.00 0.00 40.87 2.43
76 77 2.685999 GCAATGGCTTCCCCCTCT 59.314 61.111 0.00 0.00 36.96 3.69
77 78 2.442830 GGCAATGGCTTCCCCCTC 60.443 66.667 0.00 0.00 40.87 4.30
78 79 4.447342 CGGCAATGGCTTCCCCCT 62.447 66.667 5.02 0.00 40.87 4.79
79 80 3.955543 TTCGGCAATGGCTTCCCCC 62.956 63.158 5.02 0.00 40.87 5.40
80 81 2.362375 TTCGGCAATGGCTTCCCC 60.362 61.111 5.02 0.00 40.87 4.81
81 82 2.418083 CCTTCGGCAATGGCTTCCC 61.418 63.158 5.02 0.00 40.87 3.97
82 83 3.200522 CCTTCGGCAATGGCTTCC 58.799 61.111 5.02 0.00 40.87 3.46
95 96 0.827368 AGGTCGATGAAGAGGCCTTC 59.173 55.000 6.77 0.93 39.92 3.46
96 97 1.280457 AAGGTCGATGAAGAGGCCTT 58.720 50.000 6.77 0.00 46.56 4.35
97 98 0.539051 CAAGGTCGATGAAGAGGCCT 59.461 55.000 3.86 3.86 45.71 5.19
98 99 0.250513 ACAAGGTCGATGAAGAGGCC 59.749 55.000 0.00 0.00 0.00 5.19
99 100 1.734465 CAACAAGGTCGATGAAGAGGC 59.266 52.381 0.00 0.00 0.00 4.70
100 101 1.734465 GCAACAAGGTCGATGAAGAGG 59.266 52.381 0.00 0.00 0.00 3.69
101 102 1.734465 GGCAACAAGGTCGATGAAGAG 59.266 52.381 0.00 0.00 0.00 2.85
102 103 1.347707 AGGCAACAAGGTCGATGAAGA 59.652 47.619 0.00 0.00 41.41 2.87
103 104 1.734465 GAGGCAACAAGGTCGATGAAG 59.266 52.381 0.00 0.00 41.41 3.02
104 105 1.610624 GGAGGCAACAAGGTCGATGAA 60.611 52.381 0.00 0.00 41.41 2.57
105 106 0.036388 GGAGGCAACAAGGTCGATGA 60.036 55.000 0.00 0.00 41.41 2.92
106 107 0.321564 TGGAGGCAACAAGGTCGATG 60.322 55.000 0.00 0.00 41.41 3.84
107 108 0.620556 ATGGAGGCAACAAGGTCGAT 59.379 50.000 0.00 0.00 41.41 3.59
108 109 0.321564 CATGGAGGCAACAAGGTCGA 60.322 55.000 0.00 0.00 41.41 4.20
109 110 0.321564 TCATGGAGGCAACAAGGTCG 60.322 55.000 0.00 0.00 41.41 4.79
110 111 1.168714 GTCATGGAGGCAACAAGGTC 58.831 55.000 0.00 0.00 41.41 3.85
111 112 0.251341 GGTCATGGAGGCAACAAGGT 60.251 55.000 0.00 0.00 41.41 3.50
112 113 0.251297 TGGTCATGGAGGCAACAAGG 60.251 55.000 0.00 0.00 41.41 3.61
113 114 1.475280 CATGGTCATGGAGGCAACAAG 59.525 52.381 3.17 0.00 35.25 3.16
114 115 1.203038 ACATGGTCATGGAGGCAACAA 60.203 47.619 14.49 0.00 42.91 2.83
115 116 0.405198 ACATGGTCATGGAGGCAACA 59.595 50.000 14.49 0.00 42.91 3.33
116 117 2.418368 TACATGGTCATGGAGGCAAC 57.582 50.000 14.49 0.00 42.91 4.17
117 118 3.668141 AATACATGGTCATGGAGGCAA 57.332 42.857 14.49 0.00 42.91 4.52
118 119 3.716353 AGTAATACATGGTCATGGAGGCA 59.284 43.478 14.49 0.00 42.91 4.75
119 120 4.357918 AGTAATACATGGTCATGGAGGC 57.642 45.455 14.49 2.17 42.91 4.70
120 121 6.672266 ACTAGTAATACATGGTCATGGAGG 57.328 41.667 14.49 0.00 42.91 4.30
121 122 8.861086 AGTAACTAGTAATACATGGTCATGGAG 58.139 37.037 14.49 0.00 42.91 3.86
122 123 8.777578 AGTAACTAGTAATACATGGTCATGGA 57.222 34.615 14.49 7.09 42.91 3.41
123 124 9.832445 AAAGTAACTAGTAATACATGGTCATGG 57.168 33.333 14.49 0.00 42.91 3.66
129 130 9.978044 GGTCCTAAAGTAACTAGTAATACATGG 57.022 37.037 0.00 0.00 0.00 3.66
135 136 9.377238 CCCATAGGTCCTAAAGTAACTAGTAAT 57.623 37.037 1.78 0.00 0.00 1.89
136 137 8.346828 ACCCATAGGTCCTAAAGTAACTAGTAA 58.653 37.037 1.78 0.00 46.45 2.24
137 138 7.887032 ACCCATAGGTCCTAAAGTAACTAGTA 58.113 38.462 1.78 0.00 46.45 1.82
138 139 6.750009 ACCCATAGGTCCTAAAGTAACTAGT 58.250 40.000 1.78 0.00 46.45 2.57
156 157 6.964876 TCTAGCTACTACTATGGACCCATA 57.035 41.667 8.35 8.35 37.82 2.74
157 158 5.862422 TCTAGCTACTACTATGGACCCAT 57.138 43.478 6.77 6.77 40.19 4.00
158 159 5.516768 CCATCTAGCTACTACTATGGACCCA 60.517 48.000 0.00 0.00 27.77 4.51
159 160 4.951094 CCATCTAGCTACTACTATGGACCC 59.049 50.000 0.00 0.00 27.77 4.46
160 161 5.572252 ACCATCTAGCTACTACTATGGACC 58.428 45.833 15.81 0.00 30.17 4.46
161 162 6.151480 GGAACCATCTAGCTACTACTATGGAC 59.849 46.154 15.81 11.01 30.17 4.02
162 163 6.246919 GGAACCATCTAGCTACTACTATGGA 58.753 44.000 15.81 0.87 30.17 3.41
163 164 5.124138 CGGAACCATCTAGCTACTACTATGG 59.876 48.000 10.54 10.54 31.34 2.74
164 165 5.706369 ACGGAACCATCTAGCTACTACTATG 59.294 44.000 0.00 0.00 0.00 2.23
165 166 5.878627 ACGGAACCATCTAGCTACTACTAT 58.121 41.667 0.00 0.00 0.00 2.12
166 167 5.071519 AGACGGAACCATCTAGCTACTACTA 59.928 44.000 0.00 0.00 0.00 1.82
167 168 4.136051 GACGGAACCATCTAGCTACTACT 58.864 47.826 0.00 0.00 0.00 2.57
168 169 4.136051 AGACGGAACCATCTAGCTACTAC 58.864 47.826 0.00 0.00 0.00 2.73
169 170 4.102838 AGAGACGGAACCATCTAGCTACTA 59.897 45.833 0.00 0.00 0.00 1.82
170 171 3.117813 AGAGACGGAACCATCTAGCTACT 60.118 47.826 0.00 0.00 0.00 2.57
171 172 3.215975 AGAGACGGAACCATCTAGCTAC 58.784 50.000 0.00 0.00 0.00 3.58
172 173 3.136809 AGAGAGACGGAACCATCTAGCTA 59.863 47.826 0.00 0.00 0.00 3.32
173 174 2.092103 AGAGAGACGGAACCATCTAGCT 60.092 50.000 0.00 0.00 0.00 3.32
174 175 2.303175 AGAGAGACGGAACCATCTAGC 58.697 52.381 0.00 0.00 0.00 3.42
175 176 4.993029 AAAGAGAGACGGAACCATCTAG 57.007 45.455 0.00 0.00 0.00 2.43
176 177 4.081642 CCAAAAGAGAGACGGAACCATCTA 60.082 45.833 0.00 0.00 0.00 1.98
177 178 3.307059 CCAAAAGAGAGACGGAACCATCT 60.307 47.826 0.00 0.00 0.00 2.90
178 179 3.003480 CCAAAAGAGAGACGGAACCATC 58.997 50.000 0.00 0.00 0.00 3.51
179 180 2.637872 TCCAAAAGAGAGACGGAACCAT 59.362 45.455 0.00 0.00 0.00 3.55
180 181 2.043992 TCCAAAAGAGAGACGGAACCA 58.956 47.619 0.00 0.00 0.00 3.67
181 182 2.833631 TCCAAAAGAGAGACGGAACC 57.166 50.000 0.00 0.00 0.00 3.62
182 183 4.195225 AGATCCAAAAGAGAGACGGAAC 57.805 45.455 0.00 0.00 0.00 3.62
183 184 4.283467 TGAAGATCCAAAAGAGAGACGGAA 59.717 41.667 0.00 0.00 0.00 4.30
184 185 3.832490 TGAAGATCCAAAAGAGAGACGGA 59.168 43.478 0.00 0.00 0.00 4.69
185 186 4.193826 TGAAGATCCAAAAGAGAGACGG 57.806 45.455 0.00 0.00 0.00 4.79
186 187 6.256757 GGTATTGAAGATCCAAAAGAGAGACG 59.743 42.308 0.00 0.00 0.00 4.18
187 188 7.106239 TGGTATTGAAGATCCAAAAGAGAGAC 58.894 38.462 0.00 0.00 0.00 3.36
188 189 7.257790 TGGTATTGAAGATCCAAAAGAGAGA 57.742 36.000 0.00 0.00 0.00 3.10
189 190 7.555554 ACATGGTATTGAAGATCCAAAAGAGAG 59.444 37.037 0.00 0.00 33.55 3.20
190 191 7.405292 ACATGGTATTGAAGATCCAAAAGAGA 58.595 34.615 0.00 0.00 33.55 3.10
191 192 7.636150 ACATGGTATTGAAGATCCAAAAGAG 57.364 36.000 0.00 0.00 33.55 2.85
192 193 7.890127 AGAACATGGTATTGAAGATCCAAAAGA 59.110 33.333 0.00 0.00 33.55 2.52
193 194 8.059798 AGAACATGGTATTGAAGATCCAAAAG 57.940 34.615 0.00 0.00 33.55 2.27
194 195 7.148255 CGAGAACATGGTATTGAAGATCCAAAA 60.148 37.037 0.00 0.00 33.55 2.44
195 196 6.316140 CGAGAACATGGTATTGAAGATCCAAA 59.684 38.462 0.00 0.00 33.55 3.28
196 197 5.817296 CGAGAACATGGTATTGAAGATCCAA 59.183 40.000 0.00 0.00 33.55 3.53
197 198 5.104941 ACGAGAACATGGTATTGAAGATCCA 60.105 40.000 0.00 0.00 0.00 3.41
198 199 5.360591 ACGAGAACATGGTATTGAAGATCC 58.639 41.667 0.00 0.00 0.00 3.36
199 200 6.758886 AGAACGAGAACATGGTATTGAAGATC 59.241 38.462 0.00 0.00 0.00 2.75
200 201 6.644347 AGAACGAGAACATGGTATTGAAGAT 58.356 36.000 0.00 0.00 0.00 2.40
201 202 6.037786 AGAACGAGAACATGGTATTGAAGA 57.962 37.500 0.00 0.00 0.00 2.87
202 203 6.368791 TCAAGAACGAGAACATGGTATTGAAG 59.631 38.462 0.00 0.00 28.83 3.02
203 204 6.227522 TCAAGAACGAGAACATGGTATTGAA 58.772 36.000 0.00 0.00 28.83 2.69
204 205 5.789521 TCAAGAACGAGAACATGGTATTGA 58.210 37.500 0.00 0.00 0.00 2.57
205 206 6.508563 CGATCAAGAACGAGAACATGGTATTG 60.509 42.308 0.00 0.00 0.00 1.90
206 207 5.520288 CGATCAAGAACGAGAACATGGTATT 59.480 40.000 0.00 0.00 0.00 1.89
207 208 5.043903 CGATCAAGAACGAGAACATGGTAT 58.956 41.667 0.00 0.00 0.00 2.73
208 209 4.157105 TCGATCAAGAACGAGAACATGGTA 59.843 41.667 0.00 0.00 34.49 3.25
209 210 3.056821 TCGATCAAGAACGAGAACATGGT 60.057 43.478 0.00 0.00 34.49 3.55
210 211 3.511699 TCGATCAAGAACGAGAACATGG 58.488 45.455 0.00 0.00 34.49 3.66
228 229 8.664798 CCACTGTTTACATTAAATTGATCTCGA 58.335 33.333 0.00 0.00 0.00 4.04
229 230 8.450964 ACCACTGTTTACATTAAATTGATCTCG 58.549 33.333 0.00 0.00 0.00 4.04
230 231 9.559958 CACCACTGTTTACATTAAATTGATCTC 57.440 33.333 0.00 0.00 0.00 2.75
231 232 9.077885 ACACCACTGTTTACATTAAATTGATCT 57.922 29.630 0.00 0.00 0.00 2.75
232 233 9.691362 AACACCACTGTTTACATTAAATTGATC 57.309 29.630 0.00 0.00 37.31 2.92
247 248 2.232696 GTCCCAACAAAACACCACTGTT 59.767 45.455 0.00 0.00 42.81 3.16
248 249 1.822371 GTCCCAACAAAACACCACTGT 59.178 47.619 0.00 0.00 0.00 3.55
249 250 1.821753 TGTCCCAACAAAACACCACTG 59.178 47.619 0.00 0.00 30.70 3.66
250 251 2.223803 TGTCCCAACAAAACACCACT 57.776 45.000 0.00 0.00 30.70 4.00
251 252 2.428890 TCATGTCCCAACAAAACACCAC 59.571 45.455 0.00 0.00 39.30 4.16
252 253 2.739943 TCATGTCCCAACAAAACACCA 58.260 42.857 0.00 0.00 39.30 4.17
253 254 3.320541 TCATCATGTCCCAACAAAACACC 59.679 43.478 0.00 0.00 39.30 4.16
254 255 4.582701 TCATCATGTCCCAACAAAACAC 57.417 40.909 0.00 0.00 39.30 3.32
255 256 5.804944 ATTCATCATGTCCCAACAAAACA 57.195 34.783 0.00 0.00 39.30 2.83
256 257 5.990996 ACAATTCATCATGTCCCAACAAAAC 59.009 36.000 0.00 0.00 39.30 2.43
257 258 6.172136 ACAATTCATCATGTCCCAACAAAA 57.828 33.333 0.00 0.00 39.30 2.44
258 259 5.303845 TGACAATTCATCATGTCCCAACAAA 59.696 36.000 3.71 0.00 44.16 2.83
259 260 4.831710 TGACAATTCATCATGTCCCAACAA 59.168 37.500 3.71 0.00 44.16 2.83
260 261 4.218200 GTGACAATTCATCATGTCCCAACA 59.782 41.667 3.71 0.00 44.16 3.33
261 262 4.460382 AGTGACAATTCATCATGTCCCAAC 59.540 41.667 3.71 0.00 44.16 3.77
262 263 4.665451 AGTGACAATTCATCATGTCCCAA 58.335 39.130 3.71 0.00 44.16 4.12
263 264 4.305539 AGTGACAATTCATCATGTCCCA 57.694 40.909 3.71 0.00 44.16 4.37
264 265 5.047802 ACAAAGTGACAATTCATCATGTCCC 60.048 40.000 3.71 0.00 44.16 4.46
265 266 5.860182 CACAAAGTGACAATTCATCATGTCC 59.140 40.000 3.71 0.00 44.16 4.02
266 267 6.671190 TCACAAAGTGACAATTCATCATGTC 58.329 36.000 0.00 0.00 44.84 3.06
267 268 6.638096 TCACAAAGTGACAATTCATCATGT 57.362 33.333 0.00 0.00 37.67 3.21
268 269 9.285770 CTAATCACAAAGTGACAATTCATCATG 57.714 33.333 1.43 0.00 45.65 3.07
269 270 9.234827 TCTAATCACAAAGTGACAATTCATCAT 57.765 29.630 1.43 0.00 45.65 2.45
270 271 8.620116 TCTAATCACAAAGTGACAATTCATCA 57.380 30.769 1.43 0.00 45.65 3.07
272 273 9.850628 CAATCTAATCACAAAGTGACAATTCAT 57.149 29.630 1.43 0.00 45.65 2.57
273 274 8.849168 ACAATCTAATCACAAAGTGACAATTCA 58.151 29.630 1.43 0.00 45.65 2.57
274 275 9.683069 AACAATCTAATCACAAAGTGACAATTC 57.317 29.630 1.43 0.00 45.65 2.17
275 276 9.683069 GAACAATCTAATCACAAAGTGACAATT 57.317 29.630 1.43 0.00 45.65 2.32
276 277 8.849168 TGAACAATCTAATCACAAAGTGACAAT 58.151 29.630 1.43 0.00 45.65 2.71
277 278 8.219546 TGAACAATCTAATCACAAAGTGACAA 57.780 30.769 1.43 0.00 45.65 3.18
278 279 7.800155 TGAACAATCTAATCACAAAGTGACA 57.200 32.000 1.43 0.00 45.65 3.58
361 362 9.206870 GCCAAAGAAGATAGATAGATCAAAGAG 57.793 37.037 0.00 0.00 0.00 2.85
362 363 8.153550 GGCCAAAGAAGATAGATAGATCAAAGA 58.846 37.037 0.00 0.00 0.00 2.52
363 364 7.935755 TGGCCAAAGAAGATAGATAGATCAAAG 59.064 37.037 0.61 0.00 0.00 2.77
364 365 7.805163 TGGCCAAAGAAGATAGATAGATCAAA 58.195 34.615 0.61 0.00 0.00 2.69
365 366 7.379059 TGGCCAAAGAAGATAGATAGATCAA 57.621 36.000 0.61 0.00 0.00 2.57
366 367 7.071698 ACTTGGCCAAAGAAGATAGATAGATCA 59.928 37.037 20.91 0.00 39.38 2.92
367 368 7.449247 ACTTGGCCAAAGAAGATAGATAGATC 58.551 38.462 20.91 0.00 39.38 2.75
368 369 7.385894 ACTTGGCCAAAGAAGATAGATAGAT 57.614 36.000 20.91 0.00 39.38 1.98
369 370 6.814954 ACTTGGCCAAAGAAGATAGATAGA 57.185 37.500 20.91 0.00 39.38 1.98
370 371 7.050377 TGAACTTGGCCAAAGAAGATAGATAG 58.950 38.462 20.91 5.09 39.38 2.08
371 372 6.957631 TGAACTTGGCCAAAGAAGATAGATA 58.042 36.000 20.91 0.00 39.38 1.98
372 373 5.819991 TGAACTTGGCCAAAGAAGATAGAT 58.180 37.500 20.91 0.00 39.38 1.98
373 374 5.241403 TGAACTTGGCCAAAGAAGATAGA 57.759 39.130 20.91 0.00 39.38 1.98
374 375 5.964958 TTGAACTTGGCCAAAGAAGATAG 57.035 39.130 20.91 7.50 39.38 2.08
375 376 5.123820 CGATTGAACTTGGCCAAAGAAGATA 59.876 40.000 20.91 2.32 39.38 1.98
376 377 4.082571 CGATTGAACTTGGCCAAAGAAGAT 60.083 41.667 20.91 11.00 39.38 2.40
377 378 3.253188 CGATTGAACTTGGCCAAAGAAGA 59.747 43.478 20.91 6.31 39.38 2.87
378 379 3.253188 TCGATTGAACTTGGCCAAAGAAG 59.747 43.478 20.91 10.37 39.38 2.85
379 380 3.218453 TCGATTGAACTTGGCCAAAGAA 58.782 40.909 20.91 9.85 39.38 2.52
380 381 2.857483 TCGATTGAACTTGGCCAAAGA 58.143 42.857 20.91 4.05 39.38 2.52
381 382 3.855689 ATCGATTGAACTTGGCCAAAG 57.144 42.857 20.91 15.62 42.07 2.77
382 383 4.599047 AAATCGATTGAACTTGGCCAAA 57.401 36.364 20.91 4.13 0.00 3.28
383 384 5.652014 AGATAAATCGATTGAACTTGGCCAA 59.348 36.000 19.25 19.25 0.00 4.52
384 385 5.192927 AGATAAATCGATTGAACTTGGCCA 58.807 37.500 12.25 0.00 0.00 5.36
385 386 5.757850 AGATAAATCGATTGAACTTGGCC 57.242 39.130 12.25 0.00 0.00 5.36
386 387 6.785191 TGAAGATAAATCGATTGAACTTGGC 58.215 36.000 19.67 9.19 0.00 4.52
387 388 7.907045 CACTGAAGATAAATCGATTGAACTTGG 59.093 37.037 19.67 14.53 0.00 3.61
388 389 8.446273 ACACTGAAGATAAATCGATTGAACTTG 58.554 33.333 19.67 10.50 0.00 3.16
389 390 8.553459 ACACTGAAGATAAATCGATTGAACTT 57.447 30.769 15.83 15.83 0.00 2.66
390 391 9.653287 TTACACTGAAGATAAATCGATTGAACT 57.347 29.630 12.25 5.34 0.00 3.01
391 392 9.907576 CTTACACTGAAGATAAATCGATTGAAC 57.092 33.333 12.25 2.66 0.00 3.18
392 393 9.869757 TCTTACACTGAAGATAAATCGATTGAA 57.130 29.630 12.25 3.55 30.36 2.69
393 394 9.521503 CTCTTACACTGAAGATAAATCGATTGA 57.478 33.333 12.25 4.11 34.95 2.57
394 395 8.759641 CCTCTTACACTGAAGATAAATCGATTG 58.240 37.037 12.25 0.00 34.95 2.67
395 396 8.478877 ACCTCTTACACTGAAGATAAATCGATT 58.521 33.333 4.39 4.39 34.95 3.34
396 397 7.923344 CACCTCTTACACTGAAGATAAATCGAT 59.077 37.037 0.00 0.00 34.95 3.59
397 398 7.258441 CACCTCTTACACTGAAGATAAATCGA 58.742 38.462 0.00 0.00 34.95 3.59
398 399 6.019479 GCACCTCTTACACTGAAGATAAATCG 60.019 42.308 0.00 0.00 34.95 3.34
399 400 7.044798 AGCACCTCTTACACTGAAGATAAATC 58.955 38.462 0.00 0.00 34.95 2.17
400 401 6.951971 AGCACCTCTTACACTGAAGATAAAT 58.048 36.000 0.00 0.00 34.95 1.40
401 402 6.360370 AGCACCTCTTACACTGAAGATAAA 57.640 37.500 0.00 0.00 34.95 1.40
402 403 6.360370 AAGCACCTCTTACACTGAAGATAA 57.640 37.500 0.00 0.00 34.95 1.75
403 404 6.166279 CAAAGCACCTCTTACACTGAAGATA 58.834 40.000 0.00 0.00 34.95 1.98
404 405 4.899352 AAGCACCTCTTACACTGAAGAT 57.101 40.909 0.00 0.00 34.95 2.40
405 406 4.141711 ACAAAGCACCTCTTACACTGAAGA 60.142 41.667 0.00 0.00 33.88 2.87
406 407 4.130118 ACAAAGCACCTCTTACACTGAAG 58.870 43.478 0.00 0.00 33.88 3.02
407 408 4.150897 ACAAAGCACCTCTTACACTGAA 57.849 40.909 0.00 0.00 33.88 3.02
408 409 3.838244 ACAAAGCACCTCTTACACTGA 57.162 42.857 0.00 0.00 33.88 3.41
409 410 4.449068 CACTACAAAGCACCTCTTACACTG 59.551 45.833 0.00 0.00 33.88 3.66
410 411 4.503296 CCACTACAAAGCACCTCTTACACT 60.503 45.833 0.00 0.00 33.88 3.55
411 412 3.746492 CCACTACAAAGCACCTCTTACAC 59.254 47.826 0.00 0.00 33.88 2.90
412 413 3.244422 CCCACTACAAAGCACCTCTTACA 60.244 47.826 0.00 0.00 33.88 2.41
413 414 3.244457 ACCCACTACAAAGCACCTCTTAC 60.244 47.826 0.00 0.00 33.88 2.34
414 415 2.976882 ACCCACTACAAAGCACCTCTTA 59.023 45.455 0.00 0.00 33.88 2.10
415 416 1.774856 ACCCACTACAAAGCACCTCTT 59.225 47.619 0.00 0.00 36.34 2.85
416 417 1.435256 ACCCACTACAAAGCACCTCT 58.565 50.000 0.00 0.00 0.00 3.69
417 418 2.152016 GAACCCACTACAAAGCACCTC 58.848 52.381 0.00 0.00 0.00 3.85
418 419 1.493022 TGAACCCACTACAAAGCACCT 59.507 47.619 0.00 0.00 0.00 4.00
419 420 1.975660 TGAACCCACTACAAAGCACC 58.024 50.000 0.00 0.00 0.00 5.01
420 421 3.821033 AGATTGAACCCACTACAAAGCAC 59.179 43.478 0.00 0.00 0.00 4.40
421 422 4.098914 AGATTGAACCCACTACAAAGCA 57.901 40.909 0.00 0.00 0.00 3.91
422 423 4.278419 ACAAGATTGAACCCACTACAAAGC 59.722 41.667 0.00 0.00 0.00 3.51
423 424 5.278463 CCACAAGATTGAACCCACTACAAAG 60.278 44.000 0.00 0.00 0.00 2.77
424 425 4.582656 CCACAAGATTGAACCCACTACAAA 59.417 41.667 0.00 0.00 0.00 2.83
425 426 4.141287 CCACAAGATTGAACCCACTACAA 58.859 43.478 0.00 0.00 0.00 2.41
426 427 3.137544 ACCACAAGATTGAACCCACTACA 59.862 43.478 0.00 0.00 0.00 2.74
427 428 3.502211 CACCACAAGATTGAACCCACTAC 59.498 47.826 0.00 0.00 0.00 2.73
428 429 3.750371 CACCACAAGATTGAACCCACTA 58.250 45.455 0.00 0.00 0.00 2.74
429 430 2.586425 CACCACAAGATTGAACCCACT 58.414 47.619 0.00 0.00 0.00 4.00
430 431 1.000274 GCACCACAAGATTGAACCCAC 60.000 52.381 0.00 0.00 0.00 4.61
431 432 1.133513 AGCACCACAAGATTGAACCCA 60.134 47.619 0.00 0.00 0.00 4.51
432 433 1.541588 GAGCACCACAAGATTGAACCC 59.458 52.381 0.00 0.00 0.00 4.11
433 434 2.508526 AGAGCACCACAAGATTGAACC 58.491 47.619 0.00 0.00 0.00 3.62
434 435 4.083271 GGTTAGAGCACCACAAGATTGAAC 60.083 45.833 0.00 0.00 36.73 3.18
435 436 4.072131 GGTTAGAGCACCACAAGATTGAA 58.928 43.478 0.00 0.00 36.73 2.69
436 437 3.559171 GGGTTAGAGCACCACAAGATTGA 60.559 47.826 0.00 0.00 38.79 2.57
437 438 2.749621 GGGTTAGAGCACCACAAGATTG 59.250 50.000 0.00 0.00 38.79 2.67
438 439 2.375174 TGGGTTAGAGCACCACAAGATT 59.625 45.455 0.00 0.00 38.79 2.40
439 440 1.985159 TGGGTTAGAGCACCACAAGAT 59.015 47.619 0.00 0.00 38.79 2.40
440 441 1.347707 CTGGGTTAGAGCACCACAAGA 59.652 52.381 0.00 0.00 38.79 3.02
441 442 1.072331 ACTGGGTTAGAGCACCACAAG 59.928 52.381 0.00 0.00 38.79 3.16
442 443 1.071699 GACTGGGTTAGAGCACCACAA 59.928 52.381 0.00 0.00 38.79 3.33
443 444 0.685097 GACTGGGTTAGAGCACCACA 59.315 55.000 0.00 0.00 38.79 4.17
444 445 0.977395 AGACTGGGTTAGAGCACCAC 59.023 55.000 0.00 0.00 38.79 4.16
445 446 2.615986 TAGACTGGGTTAGAGCACCA 57.384 50.000 0.00 0.00 38.79 4.17
446 447 4.216708 AGTATAGACTGGGTTAGAGCACC 58.783 47.826 0.00 0.00 33.41 5.01
447 448 6.063404 AGTAGTATAGACTGGGTTAGAGCAC 58.937 44.000 0.00 0.00 36.28 4.40
448 449 6.263412 AGTAGTATAGACTGGGTTAGAGCA 57.737 41.667 0.00 0.00 36.28 4.26
449 450 8.866970 AATAGTAGTATAGACTGGGTTAGAGC 57.133 38.462 0.00 0.00 36.28 4.09
501 502 2.514803 GATACACATAATGGGGTGGCC 58.485 52.381 0.00 0.00 39.31 5.36
569 570 2.704065 CCCCGGTCAGATGTATTTAGGT 59.296 50.000 0.00 0.00 0.00 3.08
632 633 0.320073 AAATTTCGTCCGCTCGGTGA 60.320 50.000 8.28 5.21 36.47 4.02
781 783 0.840722 GGGAAGGTGGAAGGAGGACA 60.841 60.000 0.00 0.00 0.00 4.02
881 889 0.389166 CGAGCCAGTGAGGAACAGAC 60.389 60.000 0.00 0.00 41.22 3.51
913 921 0.317160 CCACACTAACACCTCGCAGA 59.683 55.000 0.00 0.00 0.00 4.26
926 934 0.044702 TCAGATCCCATCCCCACACT 59.955 55.000 0.00 0.00 0.00 3.55
971 979 1.961394 AGCTCCAGAACGTGTACTTCA 59.039 47.619 0.00 0.00 0.00 3.02
974 982 0.038159 GCAGCTCCAGAACGTGTACT 60.038 55.000 0.00 0.00 0.00 2.73
1045 1054 4.383226 GGGATTTCTTCTAGAAAGAGCGGT 60.383 45.833 6.63 0.00 46.15 5.68
1057 1066 2.257207 TGACACCGAGGGATTTCTTCT 58.743 47.619 0.00 0.00 0.00 2.85
1161 1186 3.077556 AGCCGCAGTCCCCTAGTG 61.078 66.667 0.00 0.00 0.00 2.74
1162 1187 3.077556 CAGCCGCAGTCCCCTAGT 61.078 66.667 0.00 0.00 0.00 2.57
1163 1188 4.537433 GCAGCCGCAGTCCCCTAG 62.537 72.222 0.00 0.00 38.36 3.02
1201 1226 1.198637 GTTGCTGACCTGTGCATCTTC 59.801 52.381 0.00 0.00 39.07 2.87
1272 1297 3.002246 ACACGATGCCATATTACAAAGCG 59.998 43.478 0.00 0.00 0.00 4.68
1301 1326 8.996271 CACTTGCAACATCAGTATATCACATAT 58.004 33.333 0.00 0.00 0.00 1.78
1306 1331 6.758416 GTCTCACTTGCAACATCAGTATATCA 59.242 38.462 0.00 0.00 0.00 2.15
1310 1335 5.157940 AGTCTCACTTGCAACATCAGTAT 57.842 39.130 0.00 0.00 0.00 2.12
1380 1405 3.008375 ACTGTGAGCTAGATTGCAGGAAA 59.992 43.478 14.35 0.00 34.99 3.13
1382 1407 2.182827 ACTGTGAGCTAGATTGCAGGA 58.817 47.619 14.35 0.00 34.99 3.86
1401 1426 4.670227 AGCGAAGTCAGAAATTTGCTAC 57.330 40.909 8.92 0.00 42.93 3.58
1495 1521 1.677300 CAGGTACCCATGCGGCAAA 60.677 57.895 6.82 0.00 33.26 3.68
1584 1695 1.734465 GCTGCACGCTTCAGTAGAAAT 59.266 47.619 0.00 0.00 34.21 2.17
1588 1699 0.742281 ATGGCTGCACGCTTCAGTAG 60.742 55.000 0.50 0.00 39.13 2.57
1672 1783 0.255890 TATGAAAGCCTGCTCCCCAC 59.744 55.000 0.00 0.00 0.00 4.61
1675 1786 2.936202 TCATTATGAAAGCCTGCTCCC 58.064 47.619 0.00 0.00 0.00 4.30
1735 1847 4.569966 CAGATTGACTTAGTGGCATCTCAC 59.430 45.833 0.00 0.00 37.89 3.51
1800 1912 9.521503 CGAATCTGATTCAAGAAAGATGTAGTA 57.478 33.333 25.32 0.00 39.22 1.82
1898 2012 5.013704 TGGGGCTTGAGTTTTCTACTGATTA 59.986 40.000 0.00 0.00 37.17 1.75
1899 2013 4.202567 TGGGGCTTGAGTTTTCTACTGATT 60.203 41.667 0.00 0.00 37.17 2.57
1900 2014 3.330701 TGGGGCTTGAGTTTTCTACTGAT 59.669 43.478 0.00 0.00 37.17 2.90
1933 2047 9.403110 GAATAGTTTCAGTCGTTACTACAGAAA 57.597 33.333 4.09 4.09 33.48 2.52
1945 2059 4.092771 TGTCCTCGAATAGTTTCAGTCG 57.907 45.455 0.00 0.00 34.85 4.18
2057 2172 4.267341 AGGTACTCTACAAGCCCATACT 57.733 45.455 0.00 0.00 0.00 2.12
2289 2408 6.150976 CCATTGCTCTATTGTGTTCCAAACTA 59.849 38.462 0.00 0.00 36.44 2.24
2297 2416 5.255687 TGATCACCATTGCTCTATTGTGTT 58.744 37.500 0.00 0.00 0.00 3.32
2303 2422 4.005487 GAGCTGATCACCATTGCTCTAT 57.995 45.455 20.80 0.00 44.52 1.98
2312 2431 3.465742 GCTAGAATGAGCTGATCACCA 57.534 47.619 0.00 0.00 41.91 4.17
2389 2590 9.482627 CATACTCATATTTAGAAACAGAGGGAC 57.517 37.037 0.00 0.00 0.00 4.46
2390 2591 8.651389 CCATACTCATATTTAGAAACAGAGGGA 58.349 37.037 0.00 0.00 0.00 4.20
2413 2614 8.824756 ACTATTGATATCCGTATGTAGTCCAT 57.175 34.615 0.00 0.00 37.58 3.41
2415 2616 8.182881 GTGACTATTGATATCCGTATGTAGTCC 58.817 40.741 0.00 1.67 37.22 3.85
2416 2617 8.948145 AGTGACTATTGATATCCGTATGTAGTC 58.052 37.037 0.00 9.00 38.04 2.59
2417 2618 8.865420 AGTGACTATTGATATCCGTATGTAGT 57.135 34.615 0.00 0.32 0.00 2.73
2459 2677 4.725754 CGAAGCGAAATGAGTGAATTTAGC 59.274 41.667 6.64 6.64 44.02 3.09
2530 2748 2.686119 GGCCCAATGTAGTACTCCCTA 58.314 52.381 0.00 0.00 0.00 3.53
2542 2760 2.926778 TTGAAACAAAGGGCCCAATG 57.073 45.000 27.56 24.11 0.00 2.82
2595 2813 3.817084 TGGATCTTGTCAGCTTCAAACTG 59.183 43.478 0.00 0.00 36.44 3.16
2602 2820 6.261826 GCAAGTTATATGGATCTTGTCAGCTT 59.738 38.462 0.00 0.00 39.28 3.74
2617 2835 6.375174 TGAACATCAAGCAGTGCAAGTTATAT 59.625 34.615 19.20 0.00 0.00 0.86
2621 2839 2.689471 TGAACATCAAGCAGTGCAAGTT 59.311 40.909 19.20 13.30 0.00 2.66
2704 2922 7.862873 AGAGCTTCAGTTTTACAACATTTTAGC 59.137 33.333 0.00 0.00 35.05 3.09
2707 2925 7.917505 CAGAGAGCTTCAGTTTTACAACATTTT 59.082 33.333 0.00 0.00 35.05 1.82
2712 2930 4.273480 TGCAGAGAGCTTCAGTTTTACAAC 59.727 41.667 0.00 0.00 45.94 3.32
2717 2935 2.158696 ACCTGCAGAGAGCTTCAGTTTT 60.159 45.455 17.39 0.00 45.94 2.43
2783 3001 1.956170 AGAGTTTGCTCACACGCCG 60.956 57.895 0.00 0.00 44.00 6.46
2785 3003 0.233332 GTCAGAGTTTGCTCACACGC 59.767 55.000 0.00 0.00 44.00 5.34
2851 3069 4.904251 TCCGTACTACACTACTATCTCCCT 59.096 45.833 0.00 0.00 0.00 4.20
2881 3099 4.990426 CCTTGCAAACAAAATTCGAGGATT 59.010 37.500 0.00 0.00 34.74 3.01
2882 3100 4.559153 CCTTGCAAACAAAATTCGAGGAT 58.441 39.130 0.00 0.00 34.74 3.24
2883 3101 3.798548 GCCTTGCAAACAAAATTCGAGGA 60.799 43.478 0.00 0.00 34.74 3.71
2884 3102 2.476241 GCCTTGCAAACAAAATTCGAGG 59.524 45.455 0.00 0.00 34.74 4.63
2885 3103 3.122297 TGCCTTGCAAACAAAATTCGAG 58.878 40.909 0.00 0.00 34.76 4.04
2886 3104 3.170791 TGCCTTGCAAACAAAATTCGA 57.829 38.095 0.00 0.00 34.76 3.71
2887 3105 3.248125 ACATGCCTTGCAAACAAAATTCG 59.752 39.130 0.00 0.00 43.62 3.34
2888 3106 4.816786 ACATGCCTTGCAAACAAAATTC 57.183 36.364 0.00 0.00 43.62 2.17
2889 3107 5.236911 CAGTACATGCCTTGCAAACAAAATT 59.763 36.000 0.00 0.00 43.62 1.82
2890 3108 4.751098 CAGTACATGCCTTGCAAACAAAAT 59.249 37.500 0.00 0.00 43.62 1.82
2891 3109 4.118410 CAGTACATGCCTTGCAAACAAAA 58.882 39.130 0.00 0.00 43.62 2.44
2892 3110 3.382865 TCAGTACATGCCTTGCAAACAAA 59.617 39.130 0.00 0.00 43.62 2.83
2893 3111 2.954989 TCAGTACATGCCTTGCAAACAA 59.045 40.909 0.00 0.00 43.62 2.83
2894 3112 2.580962 TCAGTACATGCCTTGCAAACA 58.419 42.857 0.00 2.00 43.62 2.83
2895 3113 3.057315 ACATCAGTACATGCCTTGCAAAC 60.057 43.478 0.00 0.00 43.62 2.93
2896 3114 3.156293 ACATCAGTACATGCCTTGCAAA 58.844 40.909 0.00 0.00 43.62 3.68
2897 3115 2.749076 GACATCAGTACATGCCTTGCAA 59.251 45.455 0.00 0.00 43.62 4.08
2898 3116 2.290197 TGACATCAGTACATGCCTTGCA 60.290 45.455 0.00 0.00 44.86 4.08
2899 3117 2.358957 TGACATCAGTACATGCCTTGC 58.641 47.619 0.00 0.00 0.00 4.01
2900 3118 6.682423 TTAATGACATCAGTACATGCCTTG 57.318 37.500 0.00 0.00 0.00 3.61
2901 3119 7.886629 AATTAATGACATCAGTACATGCCTT 57.113 32.000 0.00 0.00 0.00 4.35
2902 3120 7.201848 CCAAATTAATGACATCAGTACATGCCT 60.202 37.037 0.00 0.00 0.00 4.75
2903 3121 6.919662 CCAAATTAATGACATCAGTACATGCC 59.080 38.462 0.00 0.00 0.00 4.40
2904 3122 6.418819 GCCAAATTAATGACATCAGTACATGC 59.581 38.462 0.00 0.00 0.00 4.06
2905 3123 7.482474 TGCCAAATTAATGACATCAGTACATG 58.518 34.615 0.00 0.00 0.00 3.21
2906 3124 7.643569 TGCCAAATTAATGACATCAGTACAT 57.356 32.000 0.00 0.00 0.00 2.29
2907 3125 7.482474 CATGCCAAATTAATGACATCAGTACA 58.518 34.615 0.00 0.00 0.00 2.90
2908 3126 6.418819 GCATGCCAAATTAATGACATCAGTAC 59.581 38.462 6.36 0.00 0.00 2.73
2909 3127 6.096564 TGCATGCCAAATTAATGACATCAGTA 59.903 34.615 16.68 0.00 0.00 2.74
2910 3128 5.105269 TGCATGCCAAATTAATGACATCAGT 60.105 36.000 16.68 0.00 0.00 3.41
2911 3129 5.353111 TGCATGCCAAATTAATGACATCAG 58.647 37.500 16.68 0.00 0.00 2.90
2912 3130 5.340439 TGCATGCCAAATTAATGACATCA 57.660 34.783 16.68 0.00 0.00 3.07
2913 3131 6.314400 ACTTTGCATGCCAAATTAATGACATC 59.686 34.615 16.68 0.00 42.22 3.06
2914 3132 6.092944 CACTTTGCATGCCAAATTAATGACAT 59.907 34.615 16.68 0.00 42.22 3.06
2915 3133 5.408909 CACTTTGCATGCCAAATTAATGACA 59.591 36.000 16.68 0.00 42.22 3.58
2916 3134 5.409214 ACACTTTGCATGCCAAATTAATGAC 59.591 36.000 16.68 0.00 42.22 3.06
2917 3135 5.549347 ACACTTTGCATGCCAAATTAATGA 58.451 33.333 16.68 0.00 42.22 2.57
2918 3136 5.866335 ACACTTTGCATGCCAAATTAATG 57.134 34.783 16.68 12.61 42.22 1.90
2919 3137 6.243811 CAACACTTTGCATGCCAAATTAAT 57.756 33.333 16.68 0.42 42.22 1.40
2920 3138 5.670149 CAACACTTTGCATGCCAAATTAA 57.330 34.783 16.68 0.00 42.22 1.40
3028 3246 9.398170 CGAAGGACAAAAATAATTGGCTATATG 57.602 33.333 0.00 0.00 38.43 1.78
3029 3247 9.131791 ACGAAGGACAAAAATAATTGGCTATAT 57.868 29.630 0.00 0.00 38.43 0.86
3030 3248 8.514330 ACGAAGGACAAAAATAATTGGCTATA 57.486 30.769 0.00 0.00 38.43 1.31
3031 3249 7.404671 ACGAAGGACAAAAATAATTGGCTAT 57.595 32.000 0.00 0.00 38.43 2.97
3032 3250 6.827586 ACGAAGGACAAAAATAATTGGCTA 57.172 33.333 0.00 0.00 38.43 3.93
3033 3251 5.722021 ACGAAGGACAAAAATAATTGGCT 57.278 34.783 0.00 0.00 38.43 4.75
3034 3252 7.382759 TGTTTACGAAGGACAAAAATAATTGGC 59.617 33.333 0.00 0.00 37.61 4.52
3035 3253 8.696175 GTGTTTACGAAGGACAAAAATAATTGG 58.304 33.333 0.00 0.00 34.56 3.16
3036 3254 9.239002 TGTGTTTACGAAGGACAAAAATAATTG 57.761 29.630 0.00 0.00 36.37 2.32
3037 3255 9.804758 TTGTGTTTACGAAGGACAAAAATAATT 57.195 25.926 0.00 0.00 0.00 1.40
3038 3256 9.804758 TTTGTGTTTACGAAGGACAAAAATAAT 57.195 25.926 0.00 0.00 34.46 1.28
3039 3257 9.291664 CTTTGTGTTTACGAAGGACAAAAATAA 57.708 29.630 0.00 0.00 42.30 1.40
3040 3258 8.675504 TCTTTGTGTTTACGAAGGACAAAAATA 58.324 29.630 7.39 0.00 44.88 1.40
3041 3259 7.540299 TCTTTGTGTTTACGAAGGACAAAAAT 58.460 30.769 7.39 0.00 44.88 1.82
3042 3260 6.910995 TCTTTGTGTTTACGAAGGACAAAAA 58.089 32.000 7.39 0.00 44.88 1.94
3043 3261 6.497785 TCTTTGTGTTTACGAAGGACAAAA 57.502 33.333 7.39 0.00 44.88 2.44
3044 3262 6.497785 TTCTTTGTGTTTACGAAGGACAAA 57.502 33.333 7.39 0.00 44.88 2.83
3045 3263 6.316640 TCATTCTTTGTGTTTACGAAGGACAA 59.683 34.615 7.39 0.00 44.88 3.18
3046 3264 5.818336 TCATTCTTTGTGTTTACGAAGGACA 59.182 36.000 7.39 0.00 44.88 4.02
3047 3265 6.295039 TCATTCTTTGTGTTTACGAAGGAC 57.705 37.500 7.39 0.00 44.88 3.85
3048 3266 6.708502 TCATCATTCTTTGTGTTTACGAAGGA 59.291 34.615 7.39 0.10 44.88 3.36
3049 3267 6.898041 TCATCATTCTTTGTGTTTACGAAGG 58.102 36.000 7.39 0.00 44.88 3.46
3050 3268 8.955061 AATCATCATTCTTTGTGTTTACGAAG 57.045 30.769 0.00 0.00 45.75 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.