Multiple sequence alignment - TraesCS6A01G166300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G166300 chr6A 100.000 9801 0 0 1 9801 169210474 169200674 0.000000e+00 18100.0
1 TraesCS6A01G166300 chr6A 93.258 178 10 2 9195 9371 370675616 370675440 2.720000e-65 261.0
2 TraesCS6A01G166300 chr6A 87.562 201 17 8 9175 9372 519804264 519804459 9.900000e-55 226.0
3 TraesCS6A01G166300 chr6D 93.711 3832 164 26 1 3801 130183790 130180005 0.000000e+00 5670.0
4 TraesCS6A01G166300 chr6D 93.929 2520 80 22 6730 9202 130179590 130177097 0.000000e+00 3738.0
5 TraesCS6A01G166300 chr6D 87.848 395 22 9 9370 9763 130177098 130176729 3.250000e-119 440.0
6 TraesCS6A01G166300 chr6D 97.753 178 2 2 6555 6732 130179935 130179760 1.240000e-78 305.0
7 TraesCS6A01G166300 chr6D 93.258 178 10 2 9195 9371 260024498 260024674 2.720000e-65 261.0
8 TraesCS6A01G166300 chr6D 87.727 220 27 0 1126 1345 130477393 130477174 3.510000e-64 257.0
9 TraesCS6A01G166300 chr6D 92.169 166 13 0 926 1091 130477554 130477389 1.650000e-57 235.0
10 TraesCS6A01G166300 chr6D 97.222 36 1 0 6754 6789 130179623 130179588 2.960000e-05 62.1
11 TraesCS6A01G166300 chr6B 94.416 3152 133 24 670 3801 228702647 228699519 0.000000e+00 4806.0
12 TraesCS6A01G166300 chr6B 93.605 2408 79 37 6838 9202 228699136 228696761 0.000000e+00 3524.0
13 TraesCS6A01G166300 chr6B 86.566 923 108 11 3800 4711 609365270 609366187 0.000000e+00 1003.0
14 TraesCS6A01G166300 chr6B 88.584 657 65 4 14 668 228703572 228702924 0.000000e+00 789.0
15 TraesCS6A01G166300 chr6B 77.011 1392 304 15 5094 6477 279571997 279573380 0.000000e+00 784.0
16 TraesCS6A01G166300 chr6B 84.323 657 69 7 956 1612 229752103 229752725 6.510000e-171 612.0
17 TraesCS6A01G166300 chr6B 98.322 298 3 2 6556 6852 228699448 228699152 1.130000e-143 521.0
18 TraesCS6A01G166300 chr6B 88.579 394 23 14 9370 9763 228696762 228696391 8.970000e-125 459.0
19 TraesCS6A01G166300 chr6B 91.209 182 10 6 9192 9372 189483577 189483401 9.830000e-60 243.0
20 TraesCS6A01G166300 chr6B 86.517 178 20 2 914 1091 228704592 228704419 1.000000e-44 193.0
21 TraesCS6A01G166300 chr6B 94.845 97 5 0 7069 7165 366432036 366431940 1.700000e-32 152.0
22 TraesCS6A01G166300 chr6B 93.478 46 3 0 9748 9793 116426881 116426926 1.770000e-07 69.4
23 TraesCS6A01G166300 chr6B 87.931 58 5 2 9745 9800 123239111 123239168 6.350000e-07 67.6
24 TraesCS6A01G166300 chr5D 83.827 1317 188 19 3800 5096 382868163 382866852 0.000000e+00 1229.0
25 TraesCS6A01G166300 chr5D 77.713 1382 297 11 5102 6477 547280378 547281754 0.000000e+00 835.0
26 TraesCS6A01G166300 chr5D 94.706 170 9 0 9207 9376 6083526 6083357 2.100000e-66 265.0
27 TraesCS6A01G166300 chr5D 95.745 94 4 0 7072 7165 504792923 504793016 1.700000e-32 152.0
28 TraesCS6A01G166300 chr5D 90.000 110 11 0 7079 7188 267842677 267842786 1.030000e-29 143.0
29 TraesCS6A01G166300 chr5A 85.285 965 114 16 5094 6050 340661206 340660262 0.000000e+00 970.0
30 TraesCS6A01G166300 chr5A 78.353 1372 281 16 5094 6457 158240311 158241674 0.000000e+00 874.0
31 TraesCS6A01G166300 chr5A 87.127 738 76 10 3826 4560 340804629 340803908 0.000000e+00 819.0
32 TraesCS6A01G166300 chr5A 76.864 1422 311 18 5094 6505 455474173 455475586 0.000000e+00 787.0
33 TraesCS6A01G166300 chr5A 77.006 1396 295 20 5094 6477 338252428 338253809 0.000000e+00 776.0
34 TraesCS6A01G166300 chr5A 85.124 484 71 1 4612 5095 340661966 340661484 2.460000e-135 494.0
35 TraesCS6A01G166300 chr5A 96.364 165 6 0 9204 9368 184230679 184230843 1.250000e-68 272.0
36 TraesCS6A01G166300 chr5A 90.090 111 9 2 7063 7171 630026378 630026268 1.030000e-29 143.0
37 TraesCS6A01G166300 chr5A 100.000 40 0 0 9762 9801 433496600 433496561 3.800000e-09 75.0
38 TraesCS6A01G166300 chr5A 93.478 46 3 0 9755 9800 438842354 438842309 1.770000e-07 69.4
39 TraesCS6A01G166300 chr3D 78.838 1394 276 16 5094 6477 239596640 239598024 0.000000e+00 922.0
40 TraesCS6A01G166300 chr3D 74.863 1094 249 23 4001 5079 157776527 157777609 3.200000e-129 473.0
41 TraesCS6A01G166300 chr7B 87.042 818 97 6 3805 4617 609756034 609755221 0.000000e+00 915.0
42 TraesCS6A01G166300 chr7B 86.052 803 95 7 3804 4603 609787298 609786510 0.000000e+00 846.0
43 TraesCS6A01G166300 chr7B 90.419 167 16 0 9474 9640 139607445 139607611 4.610000e-53 220.0
44 TraesCS6A01G166300 chr7B 88.722 133 14 1 2389 2521 382607536 382607667 2.830000e-35 161.0
45 TraesCS6A01G166300 chr7B 96.774 93 3 0 7079 7171 66196706 66196614 1.320000e-33 156.0
46 TraesCS6A01G166300 chr7B 95.652 46 2 0 9756 9801 735283679 735283724 3.800000e-09 75.0
47 TraesCS6A01G166300 chr7B 90.196 51 4 1 9750 9800 685048220 685048171 2.280000e-06 65.8
48 TraesCS6A01G166300 chr7D 80.186 1181 195 31 3929 5081 77031645 77032814 0.000000e+00 848.0
49 TraesCS6A01G166300 chr7D 76.614 1317 251 40 3800 5096 264071374 264070095 0.000000e+00 673.0
50 TraesCS6A01G166300 chr7D 76.039 1227 251 38 3887 5086 180075745 180076955 1.820000e-166 597.0
51 TraesCS6A01G166300 chr7D 91.803 183 14 1 9198 9379 522504685 522504867 4.540000e-63 254.0
52 TraesCS6A01G166300 chr7D 87.383 214 22 3 9170 9378 50710449 50710236 3.540000e-59 241.0
53 TraesCS6A01G166300 chr7D 89.831 59 6 0 2463 2521 408368434 408368492 1.060000e-09 76.8
54 TraesCS6A01G166300 chr5B 77.175 1402 289 27 5094 6479 77727857 77729243 0.000000e+00 787.0
55 TraesCS6A01G166300 chr5B 79.598 1044 195 16 4048 5079 184808173 184809210 0.000000e+00 732.0
56 TraesCS6A01G166300 chr5B 93.478 46 3 0 9755 9800 326925284 326925239 1.770000e-07 69.4
57 TraesCS6A01G166300 chr5B 95.349 43 1 1 733 774 653703209 653703251 6.350000e-07 67.6
58 TraesCS6A01G166300 chr3A 76.741 1393 307 14 5094 6477 393842458 393841074 0.000000e+00 761.0
59 TraesCS6A01G166300 chr3A 78.431 918 182 12 5098 6009 550507904 550506997 1.420000e-162 584.0
60 TraesCS6A01G166300 chr3A 76.596 987 193 27 3799 4769 667791988 667791024 8.780000e-140 508.0
61 TraesCS6A01G166300 chr3A 90.761 184 14 3 9189 9372 710866680 710866860 9.830000e-60 243.0
62 TraesCS6A01G166300 chr4D 85.975 713 95 5 3900 4609 127571186 127571896 0.000000e+00 758.0
63 TraesCS6A01G166300 chr4D 81.560 564 86 13 3801 4354 448618134 448618689 5.400000e-122 449.0
64 TraesCS6A01G166300 chr4A 84.290 732 99 9 3881 4609 440866115 440865397 0.000000e+00 701.0
65 TraesCS6A01G166300 chr4A 77.044 1211 268 10 5272 6477 162822082 162820877 0.000000e+00 688.0
66 TraesCS6A01G166300 chr7A 76.471 1326 255 43 3800 5096 287548711 287547414 0.000000e+00 667.0
67 TraesCS6A01G166300 chr7A 76.379 834 170 23 4271 5086 184331254 184332078 3.270000e-114 424.0
68 TraesCS6A01G166300 chr7A 85.455 110 7 4 9647 9755 20160482 20160381 1.350000e-18 106.0
69 TraesCS6A01G166300 chr4B 76.621 1326 239 50 3800 5074 95677595 95678900 0.000000e+00 665.0
70 TraesCS6A01G166300 chr4B 85.345 116 8 5 9641 9755 209284468 209284361 2.890000e-20 111.0
71 TraesCS6A01G166300 chr1B 85.811 296 27 10 3799 4086 628922383 628922671 5.750000e-77 300.0
72 TraesCS6A01G166300 chr1B 85.424 295 29 11 3799 4086 628998704 628998991 2.680000e-75 294.0
73 TraesCS6A01G166300 chr1B 91.860 172 12 2 9201 9371 482699048 482698878 1.270000e-58 239.0
74 TraesCS6A01G166300 chr1B 88.718 195 16 6 9184 9376 662536878 662537068 5.920000e-57 233.0
75 TraesCS6A01G166300 chr1B 90.090 111 9 2 7063 7171 148289498 148289608 1.030000e-29 143.0
76 TraesCS6A01G166300 chr1A 96.988 166 5 0 9206 9371 74014405 74014240 7.500000e-71 279.0
77 TraesCS6A01G166300 chr1A 92.941 85 5 1 9481 9565 47266864 47266781 1.340000e-23 122.0
78 TraesCS6A01G166300 chr2D 92.737 179 12 1 9193 9371 275232039 275232216 3.510000e-64 257.0
79 TraesCS6A01G166300 chr2D 88.060 134 15 1 2388 2521 342099632 342099764 3.660000e-34 158.0
80 TraesCS6A01G166300 chr2D 86.620 142 18 1 2386 2527 147232821 147232681 1.320000e-33 156.0
81 TraesCS6A01G166300 chr2D 90.654 107 10 0 7066 7172 511922702 511922596 1.030000e-29 143.0
82 TraesCS6A01G166300 chr2D 92.857 42 3 0 819 860 565939368 565939409 2.960000e-05 62.1
83 TraesCS6A01G166300 chr2B 92.308 182 12 2 9193 9372 25495970 25496151 3.510000e-64 257.0
84 TraesCS6A01G166300 chr2B 88.889 135 12 3 2388 2521 407236175 407236307 7.880000e-36 163.0
85 TraesCS6A01G166300 chr3B 90.323 186 15 3 9189 9371 571752504 571752689 3.540000e-59 241.0
86 TraesCS6A01G166300 chr3B 90.270 185 16 2 9187 9371 778706936 778707118 3.540000e-59 241.0
87 TraesCS6A01G166300 chr3B 87.313 134 15 2 2389 2521 332944509 332944641 1.700000e-32 152.0
88 TraesCS6A01G166300 chr3B 85.345 116 8 5 9641 9755 483376723 483376616 2.890000e-20 111.0
89 TraesCS6A01G166300 chr3B 84.615 117 7 8 9641 9755 669815489 669815596 1.350000e-18 106.0
90 TraesCS6A01G166300 chr3B 82.051 117 8 9 9641 9755 669840236 669840341 4.880000e-13 87.9
91 TraesCS6A01G166300 chr3B 93.478 46 3 0 9755 9800 765518240 765518285 1.770000e-07 69.4
92 TraesCS6A01G166300 chr3B 86.667 60 5 3 9744 9801 333856380 333856322 8.220000e-06 63.9
93 TraesCS6A01G166300 chr1D 90.217 184 18 0 9188 9371 490547423 490547240 3.540000e-59 241.0
94 TraesCS6A01G166300 chr1D 88.722 133 14 1 2389 2521 250738443 250738574 2.830000e-35 161.0
95 TraesCS6A01G166300 chr1D 81.618 136 11 8 2392 2527 216330023 216329902 6.260000e-17 100.0
96 TraesCS6A01G166300 chr2A 87.313 134 16 1 2388 2521 451810375 451810507 1.700000e-32 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G166300 chr6A 169200674 169210474 9800 True 18100.000000 18100 100.0000 1 9801 1 chr6A.!!$R1 9800
1 TraesCS6A01G166300 chr6D 130176729 130183790 7061 True 2043.020000 5670 94.0926 1 9763 5 chr6D.!!$R1 9762
2 TraesCS6A01G166300 chr6B 228696391 228704592 8201 True 1715.333333 4806 91.6705 14 9763 6 chr6B.!!$R3 9749
3 TraesCS6A01G166300 chr6B 609365270 609366187 917 False 1003.000000 1003 86.5660 3800 4711 1 chr6B.!!$F5 911
4 TraesCS6A01G166300 chr6B 279571997 279573380 1383 False 784.000000 784 77.0110 5094 6477 1 chr6B.!!$F4 1383
5 TraesCS6A01G166300 chr6B 229752103 229752725 622 False 612.000000 612 84.3230 956 1612 1 chr6B.!!$F3 656
6 TraesCS6A01G166300 chr5D 382866852 382868163 1311 True 1229.000000 1229 83.8270 3800 5096 1 chr5D.!!$R2 1296
7 TraesCS6A01G166300 chr5D 547280378 547281754 1376 False 835.000000 835 77.7130 5102 6477 1 chr5D.!!$F3 1375
8 TraesCS6A01G166300 chr5A 158240311 158241674 1363 False 874.000000 874 78.3530 5094 6457 1 chr5A.!!$F1 1363
9 TraesCS6A01G166300 chr5A 340803908 340804629 721 True 819.000000 819 87.1270 3826 4560 1 chr5A.!!$R1 734
10 TraesCS6A01G166300 chr5A 455474173 455475586 1413 False 787.000000 787 76.8640 5094 6505 1 chr5A.!!$F4 1411
11 TraesCS6A01G166300 chr5A 338252428 338253809 1381 False 776.000000 776 77.0060 5094 6477 1 chr5A.!!$F3 1383
12 TraesCS6A01G166300 chr5A 340660262 340661966 1704 True 732.000000 970 85.2045 4612 6050 2 chr5A.!!$R5 1438
13 TraesCS6A01G166300 chr3D 239596640 239598024 1384 False 922.000000 922 78.8380 5094 6477 1 chr3D.!!$F2 1383
14 TraesCS6A01G166300 chr3D 157776527 157777609 1082 False 473.000000 473 74.8630 4001 5079 1 chr3D.!!$F1 1078
15 TraesCS6A01G166300 chr7B 609755221 609756034 813 True 915.000000 915 87.0420 3805 4617 1 chr7B.!!$R2 812
16 TraesCS6A01G166300 chr7B 609786510 609787298 788 True 846.000000 846 86.0520 3804 4603 1 chr7B.!!$R3 799
17 TraesCS6A01G166300 chr7D 77031645 77032814 1169 False 848.000000 848 80.1860 3929 5081 1 chr7D.!!$F1 1152
18 TraesCS6A01G166300 chr7D 264070095 264071374 1279 True 673.000000 673 76.6140 3800 5096 1 chr7D.!!$R2 1296
19 TraesCS6A01G166300 chr7D 180075745 180076955 1210 False 597.000000 597 76.0390 3887 5086 1 chr7D.!!$F2 1199
20 TraesCS6A01G166300 chr5B 77727857 77729243 1386 False 787.000000 787 77.1750 5094 6479 1 chr5B.!!$F1 1385
21 TraesCS6A01G166300 chr5B 184808173 184809210 1037 False 732.000000 732 79.5980 4048 5079 1 chr5B.!!$F2 1031
22 TraesCS6A01G166300 chr3A 393841074 393842458 1384 True 761.000000 761 76.7410 5094 6477 1 chr3A.!!$R1 1383
23 TraesCS6A01G166300 chr3A 550506997 550507904 907 True 584.000000 584 78.4310 5098 6009 1 chr3A.!!$R2 911
24 TraesCS6A01G166300 chr3A 667791024 667791988 964 True 508.000000 508 76.5960 3799 4769 1 chr3A.!!$R3 970
25 TraesCS6A01G166300 chr4D 127571186 127571896 710 False 758.000000 758 85.9750 3900 4609 1 chr4D.!!$F1 709
26 TraesCS6A01G166300 chr4D 448618134 448618689 555 False 449.000000 449 81.5600 3801 4354 1 chr4D.!!$F2 553
27 TraesCS6A01G166300 chr4A 440865397 440866115 718 True 701.000000 701 84.2900 3881 4609 1 chr4A.!!$R2 728
28 TraesCS6A01G166300 chr4A 162820877 162822082 1205 True 688.000000 688 77.0440 5272 6477 1 chr4A.!!$R1 1205
29 TraesCS6A01G166300 chr7A 287547414 287548711 1297 True 667.000000 667 76.4710 3800 5096 1 chr7A.!!$R2 1296
30 TraesCS6A01G166300 chr7A 184331254 184332078 824 False 424.000000 424 76.3790 4271 5086 1 chr7A.!!$F1 815
31 TraesCS6A01G166300 chr4B 95677595 95678900 1305 False 665.000000 665 76.6210 3800 5074 1 chr4B.!!$F1 1274


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
653 1663 0.095245 CACAACTAGCGGTGAATGCG 59.905 55.000 8.31 0.00 37.18 4.73 F
2183 3491 0.739462 CGTTAGCAACCGGAGATGCA 60.739 55.000 25.37 13.60 41.41 3.96 F
3506 4825 1.135915 CAGAGACTCAGGATGGAACCG 59.864 57.143 5.02 0.00 36.16 4.44 F
4578 5977 0.748005 GTTGCGATGGCCTGGTACAT 60.748 55.000 3.32 5.84 38.85 2.29 F
5018 6426 0.106519 CCCTTCCCCATTCGCAATCT 60.107 55.000 0.00 0.00 0.00 2.40 F
5555 7245 0.321034 GACCCTGGTAACCCAACGAC 60.321 60.000 0.00 0.00 41.27 4.34 F
6166 7860 0.104725 AGGGGAGGCTGAGAATAGGG 60.105 60.000 0.00 0.00 0.00 3.53 F
6417 8112 0.106819 GTAGCCACTCCTCCGAGGTA 60.107 60.000 14.36 0.79 40.77 3.08 F
6967 8884 0.323360 TTGCAGCCCATAAGACACCC 60.323 55.000 0.00 0.00 0.00 4.61 F
8560 10522 0.601311 GCTTTCTGTCGCACAGGTCT 60.601 55.000 13.87 0.00 45.94 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2422 3731 1.481871 TCCCTTATCGTCACCTGACC 58.518 55.000 0.00 0.00 41.86 4.02 R
3968 5326 0.179124 TGTGCCGCCACTTGTTTTTC 60.179 50.000 0.00 0.00 42.54 2.29 R
4999 6407 0.106519 AGATTGCGAATGGGGAAGGG 60.107 55.000 0.00 0.00 0.00 3.95 R
5615 7305 0.111253 AAGCTGGACTTCCACAAGGG 59.889 55.000 0.00 0.00 42.01 3.95 R
6015 7709 0.321564 TCAAGGGCATGAACCTGACG 60.322 55.000 9.82 3.37 38.63 4.35 R
6489 8184 0.539986 TGATCTACCTTGGCCGGAAC 59.460 55.000 5.05 0.00 0.00 3.62 R
8046 10000 2.621668 GGCAAGCCTCCCTTAGAAACAT 60.622 50.000 3.29 0.00 31.00 2.71 R
8285 10247 4.401925 CCTCACCAAGTTCTTTCTCCATT 58.598 43.478 0.00 0.00 0.00 3.16 R
8734 10698 0.684535 TGAGACCATGTCCGCTTTCA 59.315 50.000 0.00 0.00 32.18 2.69 R
9763 11729 0.102481 ACGCACGGGCATTCTACTAG 59.898 55.000 11.77 0.00 41.24 2.57 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 1085 0.734889 GTGGAGGCATTCATTGGTCG 59.265 55.000 0.00 0.00 0.00 4.79
81 1089 3.118075 TGGAGGCATTCATTGGTCGATTA 60.118 43.478 0.00 0.00 0.00 1.75
102 1110 2.038557 ACACAATGTCCAGGTGTACCTC 59.961 50.000 0.00 0.00 46.65 3.85
113 1121 3.131577 CAGGTGTACCTCGGCATTAGTTA 59.868 47.826 0.00 0.00 46.65 2.24
137 1145 3.054139 TGAGGAGCTGGCACAAAAGATAT 60.054 43.478 0.00 0.00 38.70 1.63
149 1157 5.239525 GCACAAAAGATATCATCCACTACCC 59.760 44.000 5.32 0.00 0.00 3.69
206 1214 1.315257 AACATTGCCGCATGACCTCC 61.315 55.000 0.00 0.00 0.00 4.30
211 1219 1.220749 GCCGCATGACCTCCTTGTA 59.779 57.895 0.00 0.00 0.00 2.41
223 1231 6.184789 TGACCTCCTTGTAAAACTTTCTGTT 58.815 36.000 0.00 0.00 41.29 3.16
227 1235 7.832685 ACCTCCTTGTAAAACTTTCTGTTACTT 59.167 33.333 0.00 0.00 38.03 2.24
324 1333 9.107177 GGCTTCATCAATCATTATATCGAAGAT 57.893 33.333 0.00 0.00 45.12 2.40
349 1358 2.507471 GACATGATCAAGGAAGGAGGGT 59.493 50.000 0.00 0.00 0.00 4.34
438 1448 3.199946 GGGGTTCAGTAAGATCCATGTCA 59.800 47.826 0.00 0.00 37.77 3.58
508 1518 6.070251 TGCAGAGACAACAGAGGGAATTATTA 60.070 38.462 0.00 0.00 0.00 0.98
509 1519 6.995091 GCAGAGACAACAGAGGGAATTATTAT 59.005 38.462 0.00 0.00 0.00 1.28
535 1545 0.611200 TCGGGATTGGTGATTGACGT 59.389 50.000 0.00 0.00 0.00 4.34
547 1557 4.393062 GGTGATTGACGTTTCACATGATCT 59.607 41.667 21.24 0.00 43.20 2.75
553 1563 3.067106 ACGTTTCACATGATCTGACCAC 58.933 45.455 0.00 0.00 0.00 4.16
555 1565 3.067106 GTTTCACATGATCTGACCACGT 58.933 45.455 0.00 0.00 0.00 4.49
571 1581 2.267426 CACGTTTGAGGTGATCGCATA 58.733 47.619 8.82 0.00 36.17 3.14
626 1636 6.928492 TGCATCTACAAAATGTCGCTATATCA 59.072 34.615 0.00 0.00 0.00 2.15
638 1648 5.299279 TGTCGCTATATCATCTGACTCACAA 59.701 40.000 0.00 0.00 0.00 3.33
653 1663 0.095245 CACAACTAGCGGTGAATGCG 59.905 55.000 8.31 0.00 37.18 4.73
654 1664 1.019278 ACAACTAGCGGTGAATGCGG 61.019 55.000 0.00 0.00 37.44 5.69
660 1670 2.186903 CGGTGAATGCGGTAGCCT 59.813 61.111 0.00 0.00 44.33 4.58
661 1671 1.449601 CGGTGAATGCGGTAGCCTT 60.450 57.895 0.00 0.00 44.33 4.35
683 1967 4.657814 AAGGGTTGAAGGAAAGCTATGA 57.342 40.909 0.00 0.00 0.00 2.15
713 1997 7.852971 TTATCGACGAAATTAAATCCCAAGT 57.147 32.000 0.00 0.00 0.00 3.16
784 2070 5.725110 ATGAAGCACATAAGTTAGCGAAG 57.275 39.130 0.00 0.00 37.46 3.79
785 2071 4.566004 TGAAGCACATAAGTTAGCGAAGT 58.434 39.130 0.00 0.00 0.00 3.01
786 2072 5.716094 TGAAGCACATAAGTTAGCGAAGTA 58.284 37.500 0.00 0.00 0.00 2.24
787 2073 6.338146 TGAAGCACATAAGTTAGCGAAGTAT 58.662 36.000 0.00 0.00 0.00 2.12
788 2074 6.816640 TGAAGCACATAAGTTAGCGAAGTATT 59.183 34.615 0.00 0.00 0.00 1.89
789 2075 6.830114 AGCACATAAGTTAGCGAAGTATTC 57.170 37.500 0.00 0.00 43.09 1.75
806 2092 7.772332 AAGTATTCGGTATGCTTTTAGACTG 57.228 36.000 0.00 0.00 35.93 3.51
814 2100 5.471456 GGTATGCTTTTAGACTGGATCATGG 59.529 44.000 0.00 0.00 0.00 3.66
816 2102 3.523157 TGCTTTTAGACTGGATCATGGGA 59.477 43.478 0.00 0.00 0.00 4.37
817 2103 4.166725 TGCTTTTAGACTGGATCATGGGAT 59.833 41.667 0.00 0.00 36.13 3.85
861 2148 4.017591 TCATGACCCAACTTGTATCCCATT 60.018 41.667 0.00 0.00 0.00 3.16
883 2170 7.329226 CCATTTTGTGTGGAGTTTGATGAATAC 59.671 37.037 0.00 0.00 39.12 1.89
989 2284 2.526873 AGAGCAACCCACCTCCGT 60.527 61.111 0.00 0.00 0.00 4.69
1416 2711 3.435671 AGTGCAAGAACATAGGTAAACGC 59.564 43.478 0.00 0.00 0.00 4.84
1489 2786 7.123355 TGAGGGCCATTTTATCCAAAATTAG 57.877 36.000 6.18 0.00 41.41 1.73
1679 2987 7.548097 TCACTATACTGATTCAGTCAAGGAAC 58.452 38.462 22.16 0.00 41.21 3.62
1875 3183 6.705863 ATATTCCCTTTCTTTCATCTGTGC 57.294 37.500 0.00 0.00 0.00 4.57
1912 3220 6.849588 AACATTGAAGTGGCATTCTTTTTC 57.150 33.333 0.00 0.00 0.00 2.29
1944 3252 2.171659 TGCAACACTCCTTGTCTTACCA 59.828 45.455 0.00 0.00 37.51 3.25
1987 3295 5.649782 AATGCACCAATTTAGGACTTCAG 57.350 39.130 0.00 0.00 0.00 3.02
2183 3491 0.739462 CGTTAGCAACCGGAGATGCA 60.739 55.000 25.37 13.60 41.41 3.96
2303 3611 7.725844 ACTGGTATTTCTTTCCTTCAATGTCTT 59.274 33.333 0.00 0.00 0.00 3.01
2456 3765 8.019656 ACGATAAGGGATAATATAGGCGAATT 57.980 34.615 0.00 0.00 0.00 2.17
2521 3830 1.407979 ACCCACCGAGTAGCGATTAAG 59.592 52.381 0.00 0.00 44.57 1.85
2527 3836 1.202371 CGAGTAGCGATTAAGTGGCCA 60.202 52.381 0.00 0.00 44.57 5.36
2608 3917 7.148239 CCCTAACACATCTTACTTTCATGAACC 60.148 40.741 7.89 0.00 0.00 3.62
2985 4301 9.733556 TTGGATTTAGATGCAGTTTTAGAAGTA 57.266 29.630 0.00 0.00 34.92 2.24
3009 4325 9.712305 GTATTTGCTGATCTAGAAGGCTAATAA 57.288 33.333 20.74 10.71 34.50 1.40
3137 4453 8.350722 GGCTATGGTAGTTTTAAAAGAATAGGC 58.649 37.037 16.88 16.88 34.76 3.93
3158 4474 2.046285 CCGCCCCAGTTCCATTGAC 61.046 63.158 0.00 0.00 0.00 3.18
3222 4538 3.506844 GGGGGAATAACAAAAGCGTTACA 59.493 43.478 0.00 0.00 34.31 2.41
3223 4539 4.022155 GGGGGAATAACAAAAGCGTTACAA 60.022 41.667 0.00 0.00 34.31 2.41
3224 4540 5.158494 GGGGAATAACAAAAGCGTTACAAG 58.842 41.667 0.00 0.00 34.31 3.16
3225 4541 5.158494 GGGAATAACAAAAGCGTTACAAGG 58.842 41.667 0.00 0.00 34.31 3.61
3226 4542 5.048573 GGGAATAACAAAAGCGTTACAAGGA 60.049 40.000 0.00 0.00 34.31 3.36
3227 4543 6.084277 GGAATAACAAAAGCGTTACAAGGAG 58.916 40.000 0.00 0.00 34.31 3.69
3229 4545 7.361799 GGAATAACAAAAGCGTTACAAGGAGAT 60.362 37.037 0.00 0.00 34.31 2.75
3235 4551 6.481954 AAAGCGTTACAAGGAGATAACAAG 57.518 37.500 0.00 0.00 31.91 3.16
3237 4553 5.790593 AGCGTTACAAGGAGATAACAAGAA 58.209 37.500 0.00 0.00 31.91 2.52
3238 4554 5.638234 AGCGTTACAAGGAGATAACAAGAAC 59.362 40.000 0.00 0.00 31.91 3.01
3239 4555 5.444218 GCGTTACAAGGAGATAACAAGAACG 60.444 44.000 0.00 0.00 39.03 3.95
3240 4556 5.061808 CGTTACAAGGAGATAACAAGAACGG 59.938 44.000 0.00 0.00 34.03 4.44
3368 4687 2.484417 GGGACGACATGAAGCATCATCT 60.484 50.000 0.43 0.00 44.53 2.90
3430 4749 4.254709 AGCGCACAAGACTGGCCA 62.255 61.111 11.47 4.71 0.00 5.36
3462 4781 2.034305 CCAGGCTTCAGAATTAGCATGC 59.966 50.000 10.51 10.51 45.09 4.06
3463 4782 2.950309 CAGGCTTCAGAATTAGCATGCT 59.050 45.455 25.99 25.99 41.44 3.79
3506 4825 1.135915 CAGAGACTCAGGATGGAACCG 59.864 57.143 5.02 0.00 36.16 4.44
3577 4896 5.366460 TGAAAGAAATGCAGCAATTTTCCA 58.634 33.333 15.11 6.41 31.25 3.53
3596 4915 2.398554 CCAACTCACCCGCATTCCG 61.399 63.158 0.00 0.00 0.00 4.30
3656 4975 1.549037 GCTTCCACAACCCCCATAACA 60.549 52.381 0.00 0.00 0.00 2.41
3749 5070 4.705110 TGGAAGTCCAGTGAAATGAGAA 57.295 40.909 0.00 0.00 42.01 2.87
3889 5213 1.586042 CACAGCAAACACACGCACC 60.586 57.895 0.00 0.00 0.00 5.01
3895 5219 2.411504 AAACACACGCACCCACACC 61.412 57.895 0.00 0.00 0.00 4.16
3968 5326 4.034279 CACAACTCAACAAGCCCAAAAATG 59.966 41.667 0.00 0.00 0.00 2.32
4018 5400 1.227674 CTAATCCGGCTCTGGTGGC 60.228 63.158 0.00 0.00 0.00 5.01
4384 5781 2.838736 ACGCAACAGAAGAAGATGTGT 58.161 42.857 0.00 0.00 0.00 3.72
4406 5803 2.808919 TCGAGTCTTCTTCTGTCCCAT 58.191 47.619 0.00 0.00 0.00 4.00
4551 5949 1.680651 CCACGAGAGGCTCAGGTCT 60.681 63.158 18.26 0.00 0.00 3.85
4578 5977 0.748005 GTTGCGATGGCCTGGTACAT 60.748 55.000 3.32 5.84 38.85 2.29
4583 5982 1.879372 CGATGGCCTGGTACATGGATG 60.879 57.143 3.32 0.00 38.20 3.51
4605 6004 1.552792 AGTGGAGAAGCTACCTGAAGC 59.447 52.381 0.00 0.00 43.11 3.86
4899 6307 1.684734 GGAGGACCGGGAGCAACTA 60.685 63.158 6.32 0.00 0.00 2.24
4903 6311 2.633481 GAGGACCGGGAGCAACTATATT 59.367 50.000 6.32 0.00 0.00 1.28
4926 6334 1.627329 AGATTGCCAGAACTGAGAGCA 59.373 47.619 3.19 2.17 0.00 4.26
4990 6398 8.367911 AGGTATTTATTCTGAATGATGCGTAGA 58.632 33.333 13.01 0.00 0.00 2.59
4999 6407 2.543777 TGATGCGTAGATAAAGGCCC 57.456 50.000 0.00 0.00 0.00 5.80
5002 6410 0.693092 TGCGTAGATAAAGGCCCCCT 60.693 55.000 0.00 0.00 33.87 4.79
5018 6426 0.106519 CCCTTCCCCATTCGCAATCT 60.107 55.000 0.00 0.00 0.00 2.40
5081 6489 1.224592 GACATGATCCCAAGCCCGT 59.775 57.895 0.00 0.00 0.00 5.28
5100 6787 0.757561 TCTTGATCCCGCGGTATCCA 60.758 55.000 25.74 15.52 0.00 3.41
5193 6880 2.647802 AGTAGCCCAACACCATAACCTT 59.352 45.455 0.00 0.00 0.00 3.50
5221 6908 4.985538 TGTCAAAGTTAATCTTGAGCCCT 58.014 39.130 3.20 0.00 36.40 5.19
5291 6981 2.124570 CGGAGCCTTCCACCATGG 60.125 66.667 11.19 11.19 44.26 3.66
5338 7028 1.375326 GGATACGCCATTCCCTCCC 59.625 63.158 0.00 0.00 36.34 4.30
5439 7129 4.904253 TGTTAAACAAGAACGGGGAAAG 57.096 40.909 0.00 0.00 0.00 2.62
5492 7182 2.629909 GGGAAGTAGGGTCCAATCTCCT 60.630 54.545 0.00 0.00 36.83 3.69
5513 7203 1.435577 GTTGATGTTAACGGCGGTCT 58.564 50.000 13.24 0.00 0.00 3.85
5555 7245 0.321034 GACCCTGGTAACCCAACGAC 60.321 60.000 0.00 0.00 41.27 4.34
5556 7246 1.055551 ACCCTGGTAACCCAACGACA 61.056 55.000 0.00 0.00 41.27 4.35
5563 7253 3.952323 TGGTAACCCAACGACAATTGAAA 59.048 39.130 13.59 0.00 37.98 2.69
5615 7305 2.292267 CCCAGCTGACCATGTCATAAC 58.708 52.381 17.39 0.00 41.94 1.89
5668 7358 0.468226 TGAGGTGTTTGGAGCGAACT 59.532 50.000 0.00 0.00 0.00 3.01
5866 7560 1.609061 CGAAGGCATCAGACACCTTGT 60.609 52.381 10.04 0.00 43.82 3.16
5876 7570 0.678048 GACACCTTGTGGATGAGGGC 60.678 60.000 0.00 0.00 37.94 5.19
5901 7595 1.145571 TCCCATAATTAAGGCGGGCT 58.854 50.000 0.00 0.00 36.79 5.19
5916 7610 2.737830 GCTAGGTCGATGGAGCCC 59.262 66.667 3.06 0.00 41.62 5.19
6012 7706 4.181010 CCATCTGGCCCCGGAGTG 62.181 72.222 0.73 0.00 34.49 3.51
6033 7727 0.606401 ACGTCAGGTTCATGCCCTTG 60.606 55.000 1.32 0.00 0.00 3.61
6052 7746 3.958629 ATGGCAGCCCAGACCTCCT 62.959 63.158 9.64 0.00 46.24 3.69
6132 7826 1.676678 GCTAGATGTCGTGGGCCAGA 61.677 60.000 6.40 3.68 0.00 3.86
6137 7831 3.050275 GTCGTGGGCCAGAGCAAC 61.050 66.667 6.40 0.00 42.56 4.17
6166 7860 0.104725 AGGGGAGGCTGAGAATAGGG 60.105 60.000 0.00 0.00 0.00 3.53
6168 7862 1.757949 GGAGGCTGAGAATAGGGCC 59.242 63.158 0.00 0.00 44.38 5.80
6205 7899 2.365105 GGGTCCGGATGTCCTCCA 60.365 66.667 7.81 0.00 45.24 3.86
6211 7905 2.501610 GGATGTCCTCCAGTCGCC 59.498 66.667 0.00 0.00 44.26 5.54
6252 7946 1.273327 CAAAGCAAGGGGATGGTGTTC 59.727 52.381 0.00 0.00 0.00 3.18
6253 7947 0.609131 AAGCAAGGGGATGGTGTTCG 60.609 55.000 0.00 0.00 0.00 3.95
6324 8019 2.608623 CCCTTGAGGACCCAATTTTGT 58.391 47.619 0.00 0.00 38.24 2.83
6327 8022 3.243839 CCTTGAGGACCCAATTTTGTGTG 60.244 47.826 0.00 0.00 37.39 3.82
6331 8026 1.047801 GACCCAATTTTGTGTGCCCT 58.952 50.000 0.00 0.00 0.00 5.19
6336 8031 1.068895 CAATTTTGTGTGCCCTGCAGA 59.931 47.619 17.39 0.00 40.08 4.26
6345 8040 2.185350 CCCTGCAGACGCCAGTAG 59.815 66.667 17.39 0.00 37.32 2.57
6360 8055 0.851469 AGTAGGCCTCCTCATCCGTA 59.149 55.000 9.68 0.00 34.61 4.02
6363 8058 2.930109 AGGCCTCCTCATCCGTATAT 57.070 50.000 0.00 0.00 0.00 0.86
6384 8079 1.870064 TGACCATGAGCTGATCCTCA 58.130 50.000 0.00 4.41 45.16 3.86
6396 8091 2.708386 GATCCTCAAGATCGTACCGG 57.292 55.000 0.00 0.00 42.06 5.28
6399 8094 1.064906 TCCTCAAGATCGTACCGGAGT 60.065 52.381 9.46 0.00 0.00 3.85
6401 8096 2.548904 CCTCAAGATCGTACCGGAGTAG 59.451 54.545 9.46 0.00 0.00 2.57
6405 8100 0.310232 GATCGTACCGGAGTAGCCAC 59.690 60.000 9.46 0.00 35.94 5.01
6413 8108 4.659986 GAGTAGCCACTCCTCCGA 57.340 61.111 0.13 0.00 44.72 4.55
6414 8109 2.410466 GAGTAGCCACTCCTCCGAG 58.590 63.158 0.13 0.00 44.72 4.63
6416 8111 1.380112 GTAGCCACTCCTCCGAGGT 60.380 63.158 14.36 0.00 40.77 3.85
6417 8112 0.106819 GTAGCCACTCCTCCGAGGTA 60.107 60.000 14.36 0.79 40.77 3.08
6425 8120 2.758737 CTCCGAGGTAAGGCCCGT 60.759 66.667 0.00 0.00 38.26 5.28
6428 8123 3.072468 CGAGGTAAGGCCCGTGGA 61.072 66.667 0.00 0.00 38.26 4.02
6432 8127 2.183555 GTAAGGCCCGTGGAGTCG 59.816 66.667 0.00 0.00 0.00 4.18
6458 8153 1.074471 GGTCTAGGGCCTGGATGGA 60.074 63.158 23.30 6.86 38.35 3.41
6459 8154 1.124477 GGTCTAGGGCCTGGATGGAG 61.124 65.000 23.30 7.70 38.35 3.86
6479 8174 3.173965 AGTCGAGGAGGGATTTCTTTCA 58.826 45.455 0.00 0.00 0.00 2.69
6480 8175 3.777522 AGTCGAGGAGGGATTTCTTTCAT 59.222 43.478 0.00 0.00 0.00 2.57
6486 8181 3.313803 GGAGGGATTTCTTTCATTCTCGC 59.686 47.826 0.00 0.00 0.00 5.03
6489 8184 3.065925 GGGATTTCTTTCATTCTCGCAGG 59.934 47.826 0.00 0.00 0.00 4.85
6491 8186 4.156739 GGATTTCTTTCATTCTCGCAGGTT 59.843 41.667 0.00 0.00 0.00 3.50
6492 8187 4.749245 TTTCTTTCATTCTCGCAGGTTC 57.251 40.909 0.00 0.00 0.00 3.62
6500 8195 4.697756 TCGCAGGTTCCGGCCAAG 62.698 66.667 2.24 0.00 0.00 3.61
6529 8224 6.899393 TCAGGCACATTCTGTCTTTTATTT 57.101 33.333 0.00 0.00 29.71 1.40
6621 8336 3.877508 GGAACATGTACAGGCATAACTCC 59.122 47.826 7.57 1.07 0.00 3.85
6810 8698 8.227507 AGTATCTTTTATATTGCACCCAATCCT 58.772 33.333 0.00 0.00 41.68 3.24
6918 8835 6.888105 ACTTCACCTTTTTGACATTTCCAAT 58.112 32.000 0.00 0.00 0.00 3.16
6966 8883 1.544724 TTTGCAGCCCATAAGACACC 58.455 50.000 0.00 0.00 0.00 4.16
6967 8884 0.323360 TTGCAGCCCATAAGACACCC 60.323 55.000 0.00 0.00 0.00 4.61
6968 8885 1.207488 TGCAGCCCATAAGACACCCT 61.207 55.000 0.00 0.00 0.00 4.34
7035 8952 5.677319 TTGGGTCCTGAGTTCTATACTTG 57.323 43.478 0.00 0.00 37.17 3.16
7192 9110 3.521727 ACCCAAGGTCTAGAAGACACAT 58.478 45.455 9.15 0.00 46.79 3.21
7194 9112 3.265791 CCAAGGTCTAGAAGACACATGC 58.734 50.000 9.15 0.00 46.79 4.06
7206 9124 6.511416 AGAAGACACATGCTCATATCTGTAC 58.489 40.000 0.00 0.00 0.00 2.90
7224 9142 4.153411 TGTACCCCTAAACCACCAAATTG 58.847 43.478 0.00 0.00 0.00 2.32
7227 9145 4.041464 ACCCCTAAACCACCAAATTGTTT 58.959 39.130 0.00 0.00 36.30 2.83
7316 9235 7.966339 ATGGGTTGGATGATATTTATGATGG 57.034 36.000 0.00 0.00 0.00 3.51
7318 9237 5.954150 GGGTTGGATGATATTTATGATGGCT 59.046 40.000 0.00 0.00 0.00 4.75
7319 9238 6.096001 GGGTTGGATGATATTTATGATGGCTC 59.904 42.308 0.00 0.00 0.00 4.70
7320 9239 6.660521 GGTTGGATGATATTTATGATGGCTCA 59.339 38.462 0.00 0.00 35.41 4.26
7321 9240 7.341256 GGTTGGATGATATTTATGATGGCTCAT 59.659 37.037 5.11 5.11 44.39 2.90
7372 9297 8.946797 AATTTATGAGAGCTATAGCCCATTTT 57.053 30.769 21.17 12.46 43.38 1.82
7373 9298 7.986085 TTTATGAGAGCTATAGCCCATTTTC 57.014 36.000 21.17 10.85 43.38 2.29
7374 9299 5.573380 ATGAGAGCTATAGCCCATTTTCA 57.427 39.130 21.17 13.20 43.38 2.69
7375 9300 5.372343 TGAGAGCTATAGCCCATTTTCAA 57.628 39.130 21.17 1.58 43.38 2.69
7376 9301 5.371526 TGAGAGCTATAGCCCATTTTCAAG 58.628 41.667 21.17 0.00 43.38 3.02
7377 9302 5.130975 TGAGAGCTATAGCCCATTTTCAAGA 59.869 40.000 21.17 0.00 43.38 3.02
7378 9303 6.183361 TGAGAGCTATAGCCCATTTTCAAGAT 60.183 38.462 21.17 0.00 43.38 2.40
7379 9304 7.016563 TGAGAGCTATAGCCCATTTTCAAGATA 59.983 37.037 21.17 0.00 43.38 1.98
7380 9305 7.164803 AGAGCTATAGCCCATTTTCAAGATAC 58.835 38.462 21.17 0.00 43.38 2.24
7381 9306 7.017056 AGAGCTATAGCCCATTTTCAAGATACT 59.983 37.037 21.17 0.00 43.38 2.12
7382 9307 7.521669 AGCTATAGCCCATTTTCAAGATACTT 58.478 34.615 21.17 0.00 43.38 2.24
7383 9308 7.663493 AGCTATAGCCCATTTTCAAGATACTTC 59.337 37.037 21.17 0.00 43.38 3.01
7384 9309 7.445402 GCTATAGCCCATTTTCAAGATACTTCA 59.555 37.037 14.13 0.00 34.31 3.02
7385 9310 9.512588 CTATAGCCCATTTTCAAGATACTTCAT 57.487 33.333 0.00 0.00 0.00 2.57
7585 9511 4.936891 GGCATAAGTTTGGCCTTTATCAG 58.063 43.478 3.32 0.00 44.32 2.90
7669 9595 1.475751 CCGCTTAAGGATCATGGCAGT 60.476 52.381 4.29 0.00 0.00 4.40
7848 9802 1.555967 TCCATTTAGCACCAAAGCCC 58.444 50.000 0.00 0.00 34.23 5.19
7871 9825 6.243900 CCCTCTGGTGCATCATAGAATTAAT 58.756 40.000 13.63 0.00 0.00 1.40
8035 9989 2.539547 CCTCAAACACAGCACTGTTTCG 60.540 50.000 0.00 5.89 41.47 3.46
8279 10241 1.884235 CAGGAACACAGTTCTGGGAC 58.116 55.000 9.16 2.89 0.00 4.46
8285 10247 1.021202 CACAGTTCTGGGACGCAAAA 58.979 50.000 4.82 0.00 0.00 2.44
8309 10271 2.155279 GAGAAAGAACTTGGTGAGGGC 58.845 52.381 0.00 0.00 0.00 5.19
8379 10341 3.724374 TCGATTTCGACACTTGGAGTTT 58.276 40.909 0.00 0.00 44.22 2.66
8448 10410 1.067425 TGCATGATTCTGTTTGCTGGC 60.067 47.619 0.00 0.00 36.10 4.85
8560 10522 0.601311 GCTTTCTGTCGCACAGGTCT 60.601 55.000 13.87 0.00 45.94 3.85
8592 10556 7.164230 TCTTCTGATGTCTCTTCTTACCTTC 57.836 40.000 0.00 0.00 0.00 3.46
8606 10570 8.587608 TCTTCTTACCTTCGTCTTAATAAACCA 58.412 33.333 0.00 0.00 0.00 3.67
8710 10674 1.677576 CTGAAGTGGCACAAGAAAGCA 59.322 47.619 21.41 5.75 44.16 3.91
8734 10698 1.510480 GAGCTGCCGTCAAAGCACTT 61.510 55.000 0.00 0.00 42.06 3.16
8762 10726 0.897621 ACATGGTCTCAGCATCGTCA 59.102 50.000 0.00 0.00 33.46 4.35
8806 10770 0.468214 CCTCCGACAGATAGCTGGGA 60.468 60.000 13.45 9.22 46.60 4.37
8830 10794 8.709646 GGAATGTTGATATCTTACACGTATTCC 58.290 37.037 16.79 16.79 0.00 3.01
8925 10890 1.805869 CTGAGGCAAGAAGTGGAGTG 58.194 55.000 0.00 0.00 0.00 3.51
8935 10900 0.398318 AAGTGGAGTGAAGCTGGGAC 59.602 55.000 0.00 0.00 0.00 4.46
8957 10922 1.466360 GCACGCGCTCTTCAATGAAAT 60.466 47.619 5.73 0.00 34.30 2.17
8959 10924 2.076100 ACGCGCTCTTCAATGAAATCA 58.924 42.857 5.73 0.00 0.00 2.57
8965 10930 5.449041 GCGCTCTTCAATGAAATCATAACCA 60.449 40.000 0.00 0.00 35.10 3.67
8966 10931 6.732154 CGCTCTTCAATGAAATCATAACCAT 58.268 36.000 0.00 0.00 35.10 3.55
8967 10932 7.520453 GCGCTCTTCAATGAAATCATAACCATA 60.520 37.037 0.00 0.00 35.10 2.74
9000 10965 1.480545 TCGTCGATCCATTGATGTGGT 59.519 47.619 0.00 0.00 40.27 4.16
9002 10967 2.677836 CGTCGATCCATTGATGTGGTTT 59.322 45.455 0.00 0.00 40.27 3.27
9216 11181 9.575868 ACAATAGATATACATATACTCCCTCCG 57.424 37.037 0.00 0.00 0.00 4.63
9217 11182 9.575868 CAATAGATATACATATACTCCCTCCGT 57.424 37.037 0.00 0.00 0.00 4.69
9220 11185 8.522542 AGATATACATATACTCCCTCCGTTTC 57.477 38.462 0.00 0.00 0.00 2.78
9221 11186 8.337739 AGATATACATATACTCCCTCCGTTTCT 58.662 37.037 0.00 0.00 0.00 2.52
9222 11187 9.624373 GATATACATATACTCCCTCCGTTTCTA 57.376 37.037 0.00 0.00 0.00 2.10
9223 11188 9.986157 ATATACATATACTCCCTCCGTTTCTAA 57.014 33.333 0.00 0.00 0.00 2.10
9224 11189 8.716674 ATACATATACTCCCTCCGTTTCTAAA 57.283 34.615 0.00 0.00 0.00 1.85
9225 11190 7.613551 ACATATACTCCCTCCGTTTCTAAAT 57.386 36.000 0.00 0.00 0.00 1.40
9226 11191 8.716674 ACATATACTCCCTCCGTTTCTAAATA 57.283 34.615 0.00 0.00 0.00 1.40
9227 11192 9.322769 ACATATACTCCCTCCGTTTCTAAATAT 57.677 33.333 0.00 0.00 0.00 1.28
9230 11195 8.904099 ATACTCCCTCCGTTTCTAAATATTTG 57.096 34.615 11.05 1.65 0.00 2.32
9231 11196 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
9232 11197 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
9233 11198 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
9234 11199 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
9235 11200 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
9236 11201 8.182227 CCCTCCGTTTCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
9237 11202 8.947115 CCTCCGTTTCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
9253 11218 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
9254 11219 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
9255 11220 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
9256 11221 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
9257 11222 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
9258 11223 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
9259 11224 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
9260 11225 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
9261 11226 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
9263 11228 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
9264 11229 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
9265 11230 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
9266 11231 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
9267 11232 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
9268 11233 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
9269 11234 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
9270 11235 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
9271 11236 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
9272 11237 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
9273 11238 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
9274 11239 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
9275 11240 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
9276 11241 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
9277 11242 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
9278 11243 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
9279 11244 3.674997 ACATACGGAGCAAAATGAGTGT 58.325 40.909 0.00 0.00 0.00 3.55
9280 11245 4.827692 ACATACGGAGCAAAATGAGTGTA 58.172 39.130 0.00 0.00 0.00 2.90
9281 11246 5.428253 ACATACGGAGCAAAATGAGTGTAT 58.572 37.500 0.00 0.00 0.00 2.29
9282 11247 5.523916 ACATACGGAGCAAAATGAGTGTATC 59.476 40.000 0.00 0.00 0.00 2.24
9283 11248 4.207891 ACGGAGCAAAATGAGTGTATCT 57.792 40.909 0.00 0.00 0.00 1.98
9284 11249 5.339008 ACGGAGCAAAATGAGTGTATCTA 57.661 39.130 0.00 0.00 0.00 1.98
9285 11250 5.109903 ACGGAGCAAAATGAGTGTATCTAC 58.890 41.667 0.00 0.00 0.00 2.59
9286 11251 5.109210 CGGAGCAAAATGAGTGTATCTACA 58.891 41.667 0.00 0.00 0.00 2.74
9323 11288 9.511272 TGTCTACATACATCCGTATATTGTACT 57.489 33.333 0.00 0.00 36.11 2.73
9324 11289 9.985318 GTCTACATACATCCGTATATTGTACTC 57.015 37.037 0.00 0.00 36.11 2.59
9325 11290 9.955102 TCTACATACATCCGTATATTGTACTCT 57.045 33.333 0.00 0.00 36.11 3.24
9326 11291 9.989869 CTACATACATCCGTATATTGTACTCTG 57.010 37.037 0.00 0.00 36.11 3.35
9327 11292 8.405418 ACATACATCCGTATATTGTACTCTGT 57.595 34.615 0.00 0.00 36.11 3.41
9328 11293 8.857098 ACATACATCCGTATATTGTACTCTGTT 58.143 33.333 0.00 0.00 36.11 3.16
9329 11294 9.692749 CATACATCCGTATATTGTACTCTGTTT 57.307 33.333 0.00 0.00 36.11 2.83
9330 11295 9.692749 ATACATCCGTATATTGTACTCTGTTTG 57.307 33.333 0.00 0.00 36.53 2.93
9331 11296 7.778083 ACATCCGTATATTGTACTCTGTTTGA 58.222 34.615 0.00 0.00 0.00 2.69
9332 11297 8.255206 ACATCCGTATATTGTACTCTGTTTGAA 58.745 33.333 0.00 0.00 0.00 2.69
9333 11298 9.093970 CATCCGTATATTGTACTCTGTTTGAAA 57.906 33.333 0.00 0.00 0.00 2.69
9334 11299 9.832445 ATCCGTATATTGTACTCTGTTTGAAAT 57.168 29.630 0.00 0.00 0.00 2.17
9335 11300 9.093970 TCCGTATATTGTACTCTGTTTGAAATG 57.906 33.333 0.00 0.00 0.00 2.32
9336 11301 8.879759 CCGTATATTGTACTCTGTTTGAAATGT 58.120 33.333 0.00 0.00 0.00 2.71
9337 11302 9.901724 CGTATATTGTACTCTGTTTGAAATGTC 57.098 33.333 0.00 0.00 0.00 3.06
9342 11307 9.778741 ATTGTACTCTGTTTGAAATGTCTAGAA 57.221 29.630 0.00 0.00 0.00 2.10
9343 11308 9.607988 TTGTACTCTGTTTGAAATGTCTAGAAA 57.392 29.630 0.00 0.00 0.00 2.52
9344 11309 9.607988 TGTACTCTGTTTGAAATGTCTAGAAAA 57.392 29.630 0.00 0.00 0.00 2.29
9347 11312 8.956426 ACTCTGTTTGAAATGTCTAGAAAAACA 58.044 29.630 0.00 4.80 35.45 2.83
9348 11313 9.787532 CTCTGTTTGAAATGTCTAGAAAAACAA 57.212 29.630 0.00 0.00 36.09 2.83
9365 11330 8.520351 AGAAAAACAAATATTTAGGAACGGAGG 58.480 33.333 0.00 0.00 0.00 4.30
9366 11331 6.769134 AAACAAATATTTAGGAACGGAGGG 57.231 37.500 0.00 0.00 0.00 4.30
9367 11332 5.703730 ACAAATATTTAGGAACGGAGGGA 57.296 39.130 0.00 0.00 0.00 4.20
9368 11333 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
9464 11429 9.758021 ATTCCATGCTCCAAACATGATATAATA 57.242 29.630 0.00 0.00 46.33 0.98
9524 11489 8.837389 AGTAGAATGACCAAGTTTTACAAGAAC 58.163 33.333 0.00 0.00 0.00 3.01
9539 11504 7.873719 TTACAAGAACTTTCAAGTGGATGAA 57.126 32.000 0.00 0.00 39.66 2.57
9577 11542 0.107703 GTTGGAGATGGGATCGCACA 60.108 55.000 15.49 5.66 0.00 4.57
9596 11561 5.581605 GCACATGTTTATGGATTGAACGAT 58.418 37.500 0.00 0.00 38.66 3.73
9606 11571 6.698008 ATGGATTGAACGATATTCAAGCAA 57.302 33.333 16.70 8.26 44.07 3.91
9611 11576 6.653273 TTGAACGATATTCAAGCAAGAGAG 57.347 37.500 0.00 0.00 33.90 3.20
9613 11578 5.807520 TGAACGATATTCAAGCAAGAGAGAC 59.192 40.000 0.00 0.00 0.00 3.36
9680 11646 2.684927 GCCCACATGCCACTCTTCTATT 60.685 50.000 0.00 0.00 0.00 1.73
9687 11653 1.207329 GCCACTCTTCTATTCCACCGT 59.793 52.381 0.00 0.00 0.00 4.83
9688 11654 2.429610 GCCACTCTTCTATTCCACCGTA 59.570 50.000 0.00 0.00 0.00 4.02
9689 11655 3.737355 GCCACTCTTCTATTCCACCGTAC 60.737 52.174 0.00 0.00 0.00 3.67
9690 11656 3.181478 CCACTCTTCTATTCCACCGTACC 60.181 52.174 0.00 0.00 0.00 3.34
9691 11657 3.446161 CACTCTTCTATTCCACCGTACCA 59.554 47.826 0.00 0.00 0.00 3.25
9692 11658 3.446516 ACTCTTCTATTCCACCGTACCAC 59.553 47.826 0.00 0.00 0.00 4.16
9693 11659 2.424601 TCTTCTATTCCACCGTACCACG 59.575 50.000 0.00 0.00 42.11 4.94
9734 11700 1.071385 GGCCTCGTGATCTCCATGAAT 59.929 52.381 0.00 0.00 40.07 2.57
9777 11743 7.684937 ACTATAACTACTAGTAGAATGCCCG 57.315 40.000 31.93 16.78 36.97 6.13
9778 11744 7.230027 ACTATAACTACTAGTAGAATGCCCGT 58.770 38.462 31.93 17.30 36.97 5.28
9779 11745 4.650754 AACTACTAGTAGAATGCCCGTG 57.349 45.455 31.93 6.88 36.97 4.94
9780 11746 2.361438 ACTACTAGTAGAATGCCCGTGC 59.639 50.000 31.93 0.00 36.97 5.34
9781 11747 0.102481 ACTAGTAGAATGCCCGTGCG 59.898 55.000 3.59 0.00 41.78 5.34
9782 11748 0.102481 CTAGTAGAATGCCCGTGCGT 59.898 55.000 0.00 0.00 41.78 5.24
9784 11750 1.019278 AGTAGAATGCCCGTGCGTTG 61.019 55.000 0.86 0.00 46.55 4.10
9785 11751 2.395360 TAGAATGCCCGTGCGTTGC 61.395 57.895 0.86 0.00 46.55 4.17
9786 11752 4.776647 GAATGCCCGTGCGTTGCC 62.777 66.667 0.86 0.00 46.55 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.297893 GCGCTCGAATTGGTCATGC 60.298 57.895 0.00 0.00 0.00 4.06
43 1051 2.264480 CACGAATCCGGTGCTCCA 59.736 61.111 0.00 0.00 40.78 3.86
77 1085 4.634443 GGTACACCTGGACATTGTGTAATC 59.366 45.833 0.00 7.96 44.45 1.75
81 1089 2.054799 AGGTACACCTGGACATTGTGT 58.945 47.619 0.00 11.03 46.55 3.72
102 1110 3.496130 CAGCTCCTCATTAACTAATGCCG 59.504 47.826 4.82 0.00 42.06 5.69
113 1121 1.891150 CTTTTGTGCCAGCTCCTCATT 59.109 47.619 0.00 0.00 0.00 2.57
137 1145 1.646912 TTCGGTTGGGTAGTGGATGA 58.353 50.000 0.00 0.00 0.00 2.92
149 1157 1.135717 TCATTGCTTCGCATTCGGTTG 60.136 47.619 0.00 0.00 38.76 3.77
169 1177 1.163420 TTTCCATGCGCGTGAACAGT 61.163 50.000 30.68 0.00 0.00 3.55
223 1231 4.536090 AGCTGCCCATATAGCCATAAAGTA 59.464 41.667 0.00 0.00 40.76 2.24
227 1235 4.361783 TCTAGCTGCCCATATAGCCATAA 58.638 43.478 0.00 0.00 40.76 1.90
229 1237 2.837947 TCTAGCTGCCCATATAGCCAT 58.162 47.619 0.00 0.00 40.76 4.40
349 1358 0.391661 GCTGCTCGAATTGGAGTCCA 60.392 55.000 17.47 8.12 36.41 4.02
358 1367 1.639298 GGAACAAGCGCTGCTCGAAT 61.639 55.000 12.58 0.00 38.25 3.34
438 1448 1.006758 TCCTAGTTGGACTCCCACGAT 59.993 52.381 0.00 0.00 43.41 3.73
460 1470 0.250727 TGCTACAGCCGAGCCTTTTT 60.251 50.000 0.00 0.00 39.30 1.94
463 1473 0.970937 TACTGCTACAGCCGAGCCTT 60.971 55.000 0.00 0.00 39.30 4.35
508 1518 0.107017 CACCAATCCCGAGCTTCCAT 60.107 55.000 0.00 0.00 0.00 3.41
509 1519 1.198094 TCACCAATCCCGAGCTTCCA 61.198 55.000 0.00 0.00 0.00 3.53
535 1545 3.401033 ACGTGGTCAGATCATGTGAAA 57.599 42.857 7.81 0.00 33.60 2.69
547 1557 1.604438 CGATCACCTCAAACGTGGTCA 60.604 52.381 0.00 0.00 40.69 4.02
553 1563 2.153817 CGATATGCGATCACCTCAAACG 59.846 50.000 0.00 0.00 44.57 3.60
555 1565 2.547855 CCCGATATGCGATCACCTCAAA 60.548 50.000 0.00 0.00 44.57 2.69
599 1609 3.599343 AGCGACATTTTGTAGATGCAGA 58.401 40.909 0.00 0.00 0.00 4.26
626 1636 2.094494 CACCGCTAGTTGTGAGTCAGAT 60.094 50.000 7.72 0.00 34.37 2.90
638 1648 0.102481 CTACCGCATTCACCGCTAGT 59.898 55.000 0.00 0.00 0.00 2.57
653 1663 2.574824 TCCTTCAACCCTTAAGGCTACC 59.425 50.000 16.70 0.00 41.76 3.18
654 1664 3.994931 TCCTTCAACCCTTAAGGCTAC 57.005 47.619 16.70 0.00 41.76 3.58
660 1670 6.134535 TCATAGCTTTCCTTCAACCCTTAA 57.865 37.500 0.00 0.00 0.00 1.85
661 1671 5.772393 TCATAGCTTTCCTTCAACCCTTA 57.228 39.130 0.00 0.00 0.00 2.69
784 2070 6.278363 TCCAGTCTAAAAGCATACCGAATAC 58.722 40.000 0.00 0.00 0.00 1.89
785 2071 6.474140 TCCAGTCTAAAAGCATACCGAATA 57.526 37.500 0.00 0.00 0.00 1.75
786 2072 5.353394 TCCAGTCTAAAAGCATACCGAAT 57.647 39.130 0.00 0.00 0.00 3.34
787 2073 4.811969 TCCAGTCTAAAAGCATACCGAA 57.188 40.909 0.00 0.00 0.00 4.30
788 2074 4.404394 TGATCCAGTCTAAAAGCATACCGA 59.596 41.667 0.00 0.00 0.00 4.69
789 2075 4.693283 TGATCCAGTCTAAAAGCATACCG 58.307 43.478 0.00 0.00 0.00 4.02
790 2076 5.471456 CCATGATCCAGTCTAAAAGCATACC 59.529 44.000 0.00 0.00 0.00 2.73
814 2100 3.891422 TGGCCAAATCAAACATGATCC 57.109 42.857 0.61 0.00 0.00 3.36
816 2102 3.583966 AGGTTGGCCAAATCAAACATGAT 59.416 39.130 22.47 0.00 34.50 2.45
817 2103 2.971330 AGGTTGGCCAAATCAAACATGA 59.029 40.909 22.47 0.00 34.50 3.07
818 2104 3.244146 TGAGGTTGGCCAAATCAAACATG 60.244 43.478 25.13 0.00 34.50 3.21
826 2113 1.560505 GGTCATGAGGTTGGCCAAAT 58.439 50.000 22.47 12.48 41.22 2.32
861 2148 6.951062 TGTATTCATCAAACTCCACACAAA 57.049 33.333 0.00 0.00 0.00 2.83
1077 2372 1.623542 GGAAGGGGAGGAAGCGCTTA 61.624 60.000 25.11 0.00 0.00 3.09
1416 2711 3.181479 TGGGACAATTAACGAGAGATCGG 60.181 47.826 2.46 0.00 33.70 4.18
1679 2987 1.794116 CAAGTGCAAAATTTCAGGGCG 59.206 47.619 0.00 0.00 0.00 6.13
1912 3220 4.067896 AGGAGTGTTGCAGTATGAGTTTG 58.932 43.478 0.00 0.00 39.69 2.93
1944 3252 8.385491 TGCATTATCCTATTTCACATATCCACT 58.615 33.333 0.00 0.00 0.00 4.00
1987 3295 6.764379 AGAAGATAAGGGCTACATAAGAAGC 58.236 40.000 0.00 0.00 38.03 3.86
2102 3410 3.621715 GGGTTAGTAGAAAAGATGCACCG 59.378 47.826 0.00 0.00 0.00 4.94
2183 3491 4.142249 GCACAAGTACCACCAAGAAAAAGT 60.142 41.667 0.00 0.00 0.00 2.66
2303 3611 6.042781 AGGACTTGAGACCATAAAACAGTGTA 59.957 38.462 0.00 0.00 32.26 2.90
2422 3731 1.481871 TCCCTTATCGTCACCTGACC 58.518 55.000 0.00 0.00 41.86 4.02
2608 3917 5.011533 AGCCCATTAGATAAGCTAGACACAG 59.988 44.000 0.00 0.00 30.46 3.66
2661 3970 1.659233 CATCCGCAGTGCCACAAAA 59.341 52.632 10.11 0.00 0.00 2.44
2842 4157 8.557029 GCAGTAGAACATTTGTTACTTGTAACT 58.443 33.333 20.02 3.66 38.56 2.24
2843 4158 7.801783 GGCAGTAGAACATTTGTTACTTGTAAC 59.198 37.037 14.63 14.63 38.56 2.50
2985 4301 9.061435 GTTTATTAGCCTTCTAGATCAGCAAAT 57.939 33.333 10.66 3.16 0.00 2.32
3212 4528 6.228258 TCTTGTTATCTCCTTGTAACGCTTT 58.772 36.000 0.00 0.00 34.37 3.51
3222 4538 5.750352 TTACCCGTTCTTGTTATCTCCTT 57.250 39.130 0.00 0.00 0.00 3.36
3223 4539 5.750352 TTTACCCGTTCTTGTTATCTCCT 57.250 39.130 0.00 0.00 0.00 3.69
3224 4540 8.496707 TTTATTTACCCGTTCTTGTTATCTCC 57.503 34.615 0.00 0.00 0.00 3.71
3229 4545 9.949174 GAACTTTTTATTTACCCGTTCTTGTTA 57.051 29.630 0.00 0.00 0.00 2.41
3235 4551 8.091385 TCTCTGAACTTTTTATTTACCCGTTC 57.909 34.615 0.00 0.00 0.00 3.95
3237 4553 7.307573 CGTTCTCTGAACTTTTTATTTACCCGT 60.308 37.037 8.51 0.00 0.00 5.28
3238 4554 7.013529 CGTTCTCTGAACTTTTTATTTACCCG 58.986 38.462 8.51 0.00 0.00 5.28
3239 4555 7.868775 ACGTTCTCTGAACTTTTTATTTACCC 58.131 34.615 8.51 0.00 0.00 3.69
3240 4556 8.771766 AGACGTTCTCTGAACTTTTTATTTACC 58.228 33.333 8.51 0.00 0.00 2.85
3267 4586 7.760794 CCTTGTAACACGGTTAATAGATGTACA 59.239 37.037 0.00 0.00 0.00 2.90
3430 4749 3.041946 CTGAAGCCTGGGAAGGTACTAT 58.958 50.000 0.00 0.00 38.49 2.12
3462 4781 2.825836 GAGTTCCCATGGCCGCAG 60.826 66.667 6.09 0.00 0.00 5.18
3463 4782 4.424711 GGAGTTCCCATGGCCGCA 62.425 66.667 6.09 0.00 34.14 5.69
3506 4825 3.796504 GCAAGAGAGCAGATAGACAGAGC 60.797 52.174 0.00 0.00 0.00 4.09
3577 4896 1.303317 GGAATGCGGGTGAGTTGGT 60.303 57.895 0.00 0.00 0.00 3.67
3842 5164 1.701031 TTGGACCTTGTGGCTTCGGA 61.701 55.000 0.00 0.00 36.63 4.55
3889 5213 4.920112 TTCGTGTGCGGGGTGTGG 62.920 66.667 0.00 0.00 38.89 4.17
3895 5219 2.048597 TGCTACTTCGTGTGCGGG 60.049 61.111 0.00 0.00 38.89 6.13
3968 5326 0.179124 TGTGCCGCCACTTGTTTTTC 60.179 50.000 0.00 0.00 42.54 2.29
4370 5767 5.226396 AGACTCGAAACACATCTTCTTCTG 58.774 41.667 0.00 0.00 0.00 3.02
4384 5781 2.963101 TGGGACAGAAGAAGACTCGAAA 59.037 45.455 0.00 0.00 0.00 3.46
4406 5803 1.040646 GATGGGATGTGTCCGCTCTA 58.959 55.000 0.00 0.00 46.09 2.43
4551 5949 2.358125 CCATCGCAACGACACCCA 60.358 61.111 0.00 0.00 39.18 4.51
4578 5977 3.031736 GGTAGCTTCTCCACTACATCCA 58.968 50.000 0.00 0.00 40.45 3.41
4583 5982 3.429684 GCTTCAGGTAGCTTCTCCACTAC 60.430 52.174 0.00 0.00 38.15 2.73
4605 6004 1.267932 CGAACGACCGCTTCTAGGTAG 60.268 57.143 0.00 0.00 43.01 3.18
4606 6005 0.729116 CGAACGACCGCTTCTAGGTA 59.271 55.000 0.00 0.00 43.01 3.08
4607 6006 1.505353 CGAACGACCGCTTCTAGGT 59.495 57.895 0.00 0.00 46.16 3.08
4899 6307 7.609097 TCTCAGTTCTGGCAATCTCTAATAT 57.391 36.000 0.00 0.00 0.00 1.28
4903 6311 3.131933 GCTCTCAGTTCTGGCAATCTCTA 59.868 47.826 0.00 0.00 0.00 2.43
4926 6334 1.417890 CCTTCTGTCAGTGGTCTGGTT 59.582 52.381 0.00 0.00 41.59 3.67
4990 6398 0.633528 ATGGGGAAGGGGGCCTTTAT 60.634 55.000 0.84 0.00 44.82 1.40
4999 6407 0.106519 AGATTGCGAATGGGGAAGGG 60.107 55.000 0.00 0.00 0.00 3.95
5002 6410 1.037030 GGCAGATTGCGAATGGGGAA 61.037 55.000 0.00 0.00 46.21 3.97
5018 6426 4.687215 GACTCGCTGGCTGTGGCA 62.687 66.667 5.07 0.00 40.87 4.92
5081 6489 0.757561 TGGATACCGCGGGATCAAGA 60.758 55.000 42.87 27.34 0.00 3.02
5100 6787 0.903454 CTTCCCCACGACCTACCTGT 60.903 60.000 0.00 0.00 0.00 4.00
5125 6812 2.030363 TGACCGCCTTAATTGCAAGTTG 60.030 45.455 4.05 0.00 0.00 3.16
5127 6814 1.812571 CTGACCGCCTTAATTGCAAGT 59.187 47.619 4.94 4.58 0.00 3.16
5193 6880 6.293626 GCTCAAGATTAACTTTGACAAGAGCA 60.294 38.462 11.62 0.00 41.99 4.26
5221 6908 2.886523 CCTCTGCTTCCAACAAATGTCA 59.113 45.455 0.00 0.00 0.00 3.58
5291 6981 7.684450 TACAGTATGCGGATGACACCATCAC 62.684 48.000 0.00 0.61 45.42 3.06
5338 7028 1.144057 GATAGTCCCGCACCTGGTG 59.856 63.158 22.46 22.46 36.51 4.17
5439 7129 1.591863 GTGCGTTAGGGCGATCCTC 60.592 63.158 0.84 0.00 44.06 3.71
5451 7141 2.113139 CCTTCTGTGGGGTGCGTT 59.887 61.111 0.00 0.00 0.00 4.84
5513 7203 2.764128 GATGGTCTCCTCGGGCCA 60.764 66.667 4.39 0.00 35.28 5.36
5615 7305 0.111253 AAGCTGGACTTCCACAAGGG 59.889 55.000 0.00 0.00 42.01 3.95
5668 7358 1.883678 TCCATGAGGCTCTCCATGAA 58.116 50.000 16.72 0.00 33.74 2.57
5854 7548 1.625315 CCTCATCCACAAGGTGTCTGA 59.375 52.381 0.00 0.00 35.89 3.27
5866 7560 0.984230 GGGATTATCGCCCTCATCCA 59.016 55.000 0.00 0.00 42.56 3.41
5876 7570 4.574828 CCCGCCTTAATTATGGGATTATCG 59.425 45.833 16.82 11.02 42.77 2.92
5901 7595 0.616395 TTGTGGGCTCCATCGACCTA 60.616 55.000 0.00 0.00 35.28 3.08
5947 7641 5.902613 TTCTGGAATGTCATTAAGCAAGG 57.097 39.130 0.00 0.00 0.00 3.61
6011 7705 1.003839 GGCATGAACCTGACGTCCA 60.004 57.895 14.12 3.25 0.00 4.02
6012 7706 1.745489 GGGCATGAACCTGACGTCC 60.745 63.158 14.12 0.00 0.00 4.79
6015 7709 0.321564 TCAAGGGCATGAACCTGACG 60.322 55.000 9.82 3.37 38.63 4.35
6033 7727 2.191641 GAGGTCTGGGCTGCCATC 59.808 66.667 22.05 4.31 0.00 3.51
6039 7733 2.366570 GAGGAGGAGGTCTGGGCT 59.633 66.667 0.00 0.00 0.00 5.19
6081 7775 2.307363 CGTTTCCGCGGCAGATAAT 58.693 52.632 23.51 0.00 0.00 1.28
6101 7795 1.227639 CATCTAGCCTGAGCACATGC 58.772 55.000 3.29 3.29 43.56 4.06
6102 7796 2.481854 GACATCTAGCCTGAGCACATG 58.518 52.381 0.00 0.00 43.56 3.21
6108 7802 0.387202 CCCACGACATCTAGCCTGAG 59.613 60.000 0.00 0.00 0.00 3.35
6109 7803 1.676678 GCCCACGACATCTAGCCTGA 61.677 60.000 0.00 0.00 0.00 3.86
6115 7809 1.676678 GCTCTGGCCCACGACATCTA 61.677 60.000 0.00 0.00 0.00 1.98
6156 7850 5.746990 GCTTCTATAAGGCCCTATTCTCA 57.253 43.478 0.00 0.00 32.98 3.27
6168 7862 3.309388 CCATGTCGACGGCTTCTATAAG 58.691 50.000 11.62 0.00 35.68 1.73
6169 7863 2.035449 CCCATGTCGACGGCTTCTATAA 59.965 50.000 11.62 0.00 0.00 0.98
6171 7865 0.389391 CCCATGTCGACGGCTTCTAT 59.611 55.000 11.62 0.00 0.00 1.98
6211 7905 4.135153 CGGTGAGACCCTCCTGCG 62.135 72.222 0.00 0.00 33.75 5.18
6327 8022 4.082523 TACTGGCGTCTGCAGGGC 62.083 66.667 15.13 17.26 45.35 5.19
6345 8040 4.038162 GTCATATATACGGATGAGGAGGCC 59.962 50.000 0.00 0.00 32.81 5.19
6360 8055 5.962641 TGAGGATCAGCTCATGGTCATATAT 59.037 40.000 0.00 0.00 42.56 0.86
6363 8058 3.580039 TGAGGATCAGCTCATGGTCATA 58.420 45.455 0.00 0.00 42.56 2.15
6399 8094 0.627451 TTACCTCGGAGGAGTGGCTA 59.373 55.000 30.13 8.32 37.67 3.93
6401 8096 1.677637 CCTTACCTCGGAGGAGTGGC 61.678 65.000 30.13 0.00 37.67 5.01
6405 8100 2.134933 GGGCCTTACCTCGGAGGAG 61.135 68.421 30.13 17.26 37.67 3.69
6413 8108 1.988406 GACTCCACGGGCCTTACCT 60.988 63.158 0.84 0.00 39.10 3.08
6414 8109 2.582978 GACTCCACGGGCCTTACC 59.417 66.667 0.84 0.00 37.93 2.85
6428 8123 3.717924 CTAGACCTCCGGGCCGACT 62.718 68.421 30.79 18.98 35.63 4.18
6458 8153 3.173965 TGAAAGAAATCCCTCCTCGACT 58.826 45.455 0.00 0.00 0.00 4.18
6459 8154 3.611766 TGAAAGAAATCCCTCCTCGAC 57.388 47.619 0.00 0.00 0.00 4.20
6479 8174 2.125106 GCCGGAACCTGCGAGAAT 60.125 61.111 5.05 0.00 30.86 2.40
6480 8175 4.388499 GGCCGGAACCTGCGAGAA 62.388 66.667 5.05 0.00 30.86 2.87
6486 8181 1.078426 CTACCTTGGCCGGAACCTG 60.078 63.158 5.05 0.00 0.00 4.00
6489 8184 0.539986 TGATCTACCTTGGCCGGAAC 59.460 55.000 5.05 0.00 0.00 3.62
6491 8186 1.048724 CCTGATCTACCTTGGCCGGA 61.049 60.000 5.05 0.00 0.00 5.14
6492 8187 1.447643 CCTGATCTACCTTGGCCGG 59.552 63.158 0.00 0.00 0.00 6.13
6498 8193 4.148128 CAGAATGTGCCTGATCTACCTT 57.852 45.455 0.00 0.00 33.65 3.50
6529 8224 7.420214 CCCAGGCTCCTAAATAGAGACAATTTA 60.420 40.741 0.00 0.00 42.26 1.40
6542 8237 3.430453 CACATTTTCCCAGGCTCCTAAA 58.570 45.455 0.00 0.00 0.00 1.85
6582 8296 2.884639 GTTCCTGCTGTTTGGAAGCTAA 59.115 45.455 0.00 0.00 42.27 3.09
6810 8698 6.274436 TGGGCATAATATTTCCCTGACATCTA 59.726 38.462 16.36 0.00 39.49 1.98
6918 8835 5.485353 GGTATGATGGGATATCAGTGGAAGA 59.515 44.000 4.83 0.00 0.00 2.87
7192 9110 4.347000 GGTTTAGGGGTACAGATATGAGCA 59.653 45.833 0.00 0.00 0.00 4.26
7194 9112 5.221661 GGTGGTTTAGGGGTACAGATATGAG 60.222 48.000 0.00 0.00 0.00 2.90
7206 9124 4.698201 AAACAATTTGGTGGTTTAGGGG 57.302 40.909 0.78 0.00 33.31 4.79
7235 9153 9.962289 TTGGAGCCCATTGGTATCTGTTGATAC 62.962 44.444 1.20 7.45 42.40 2.24
7236 9154 4.202461 GGAGCCCATTGGTATCTGTTGATA 60.202 45.833 1.20 0.00 34.32 2.15
7237 9155 3.435601 GGAGCCCATTGGTATCTGTTGAT 60.436 47.826 1.20 0.00 36.74 2.57
7316 9235 3.683822 GCATACTGCTTCTGGATATGAGC 59.316 47.826 0.00 0.00 40.96 4.26
7318 9237 3.647590 TGGCATACTGCTTCTGGATATGA 59.352 43.478 0.00 0.00 44.28 2.15
7319 9238 4.011966 TGGCATACTGCTTCTGGATATG 57.988 45.455 0.00 0.00 44.28 1.78
7320 9239 4.535294 AGATGGCATACTGCTTCTGGATAT 59.465 41.667 0.00 0.00 44.28 1.63
7321 9240 3.906218 AGATGGCATACTGCTTCTGGATA 59.094 43.478 0.00 0.00 44.28 2.59
7578 9504 5.409520 GCCTATCAACATCGATGCTGATAAA 59.590 40.000 34.17 23.77 42.15 1.40
7580 9506 4.021192 TGCCTATCAACATCGATGCTGATA 60.021 41.667 33.35 33.35 40.64 2.15
7585 9511 4.692625 ACTTATGCCTATCAACATCGATGC 59.307 41.667 25.11 9.15 0.00 3.91
7848 9802 8.853077 TTATTAATTCTATGATGCACCAGAGG 57.147 34.615 2.10 0.00 0.00 3.69
7894 9848 7.796054 TGTTTAAGCTAGATTATGAGAAGGCT 58.204 34.615 0.44 0.00 0.00 4.58
7973 9927 4.331968 TGGGCAAAAGTTCACTACCATAG 58.668 43.478 0.00 0.00 0.00 2.23
8046 10000 2.621668 GGCAAGCCTCCCTTAGAAACAT 60.622 50.000 3.29 0.00 31.00 2.71
8279 10241 4.445385 CCAAGTTCTTTCTCCATTTTTGCG 59.555 41.667 0.00 0.00 0.00 4.85
8285 10247 4.401925 CCTCACCAAGTTCTTTCTCCATT 58.598 43.478 0.00 0.00 0.00 3.16
8379 10341 4.523173 AGTACAGAAGAGACGATGTCCAAA 59.477 41.667 0.00 0.00 32.18 3.28
8448 10410 2.393768 AAGTGCTTCTGCGGCGATG 61.394 57.895 12.98 1.33 43.34 3.84
8592 10556 7.419204 TGGACTGTTTTTGGTTTATTAAGACG 58.581 34.615 0.00 0.00 0.00 4.18
8606 10570 6.710744 ACGAAAGATACTCATGGACTGTTTTT 59.289 34.615 0.00 0.00 0.00 1.94
8710 10674 2.009042 GCTTTGACGGCAGCTCTATGT 61.009 52.381 0.00 0.00 32.87 2.29
8734 10698 0.684535 TGAGACCATGTCCGCTTTCA 59.315 50.000 0.00 0.00 32.18 2.69
8762 10726 3.309296 TGGCTTCTTCGATCCTCCTAAT 58.691 45.455 0.00 0.00 0.00 1.73
8806 10770 9.261180 CAGGAATACGTGTAAGATATCAACATT 57.739 33.333 12.44 4.94 0.00 2.71
8830 10794 5.657474 TCAGTAAGTAAACCTTATCGGCAG 58.343 41.667 0.00 0.00 37.93 4.85
8925 10890 3.426568 GCGTGCAGTCCCAGCTTC 61.427 66.667 0.00 0.00 0.00 3.86
8935 10900 1.225936 CATTGAAGAGCGCGTGCAG 60.226 57.895 24.79 0.00 46.23 4.41
8965 10930 6.771267 TGGATCGACGAGCCATACTATATTAT 59.229 38.462 29.80 0.00 43.58 1.28
8966 10931 6.117488 TGGATCGACGAGCCATACTATATTA 58.883 40.000 29.80 3.99 43.58 0.98
8967 10932 4.948004 TGGATCGACGAGCCATACTATATT 59.052 41.667 29.80 0.00 43.58 1.28
8977 10942 1.143305 CATCAATGGATCGACGAGCC 58.857 55.000 24.87 24.87 38.78 4.70
8978 10943 1.524355 CACATCAATGGATCGACGAGC 59.476 52.381 4.11 4.11 0.00 5.03
9000 10965 7.270832 TCAGATGATCCTTTTCCTCCTTAAA 57.729 36.000 0.00 0.00 0.00 1.52
9002 10967 6.689946 GCATCAGATGATCCTTTTCCTCCTTA 60.690 42.308 15.12 0.00 31.21 2.69
9200 11165 8.716674 ATTTAGAAACGGAGGGAGTATATGTA 57.283 34.615 0.00 0.00 0.00 2.29
9201 11166 7.613551 ATTTAGAAACGGAGGGAGTATATGT 57.386 36.000 0.00 0.00 0.00 2.29
9204 11169 9.991906 CAAATATTTAGAAACGGAGGGAGTATA 57.008 33.333 0.00 0.00 0.00 1.47
9205 11170 8.491958 ACAAATATTTAGAAACGGAGGGAGTAT 58.508 33.333 0.00 0.00 0.00 2.12
9206 11171 7.854337 ACAAATATTTAGAAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
9207 11172 6.718294 ACAAATATTTAGAAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
9208 11173 7.048512 AGACAAATATTTAGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
9209 11174 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
9210 11175 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
9211 11176 8.947115 AGAAAGACAAATATTTAGAAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
9227 11192 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
9228 11193 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
9229 11194 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
9230 11195 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
9231 11196 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
9232 11197 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
9233 11198 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
9234 11199 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
9235 11200 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
9236 11201 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
9237 11202 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
9238 11203 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
9239 11204 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
9240 11205 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
9241 11206 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
9242 11207 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
9243 11208 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
9244 11209 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
9245 11210 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
9246 11211 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
9247 11212 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
9248 11213 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
9249 11214 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
9250 11215 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
9251 11216 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
9252 11217 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
9253 11218 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
9254 11219 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
9255 11220 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
9256 11221 4.870426 ACACTCATTTTGCTCCGTATGTAG 59.130 41.667 0.00 0.00 0.00 2.74
9257 11222 4.827692 ACACTCATTTTGCTCCGTATGTA 58.172 39.130 0.00 0.00 0.00 2.29
9258 11223 3.674997 ACACTCATTTTGCTCCGTATGT 58.325 40.909 0.00 0.00 0.00 2.29
9259 11224 5.755375 AGATACACTCATTTTGCTCCGTATG 59.245 40.000 0.00 0.00 0.00 2.39
9260 11225 5.918608 AGATACACTCATTTTGCTCCGTAT 58.081 37.500 0.00 0.00 0.00 3.06
9261 11226 5.339008 AGATACACTCATTTTGCTCCGTA 57.661 39.130 0.00 0.00 0.00 4.02
9262 11227 4.207891 AGATACACTCATTTTGCTCCGT 57.792 40.909 0.00 0.00 0.00 4.69
9263 11228 5.109210 TGTAGATACACTCATTTTGCTCCG 58.891 41.667 0.00 0.00 0.00 4.63
9297 11262 9.511272 AGTACAATATACGGATGTATGTAGACA 57.489 33.333 0.00 0.00 41.37 3.41
9298 11263 9.985318 GAGTACAATATACGGATGTATGTAGAC 57.015 37.037 0.00 0.00 41.37 2.59
9299 11264 9.955102 AGAGTACAATATACGGATGTATGTAGA 57.045 33.333 0.00 0.00 41.37 2.59
9300 11265 9.989869 CAGAGTACAATATACGGATGTATGTAG 57.010 37.037 0.00 0.00 41.37 2.74
9301 11266 9.511272 ACAGAGTACAATATACGGATGTATGTA 57.489 33.333 0.00 0.00 41.37 2.29
9302 11267 8.405418 ACAGAGTACAATATACGGATGTATGT 57.595 34.615 0.00 0.00 41.37 2.29
9303 11268 9.692749 AAACAGAGTACAATATACGGATGTATG 57.307 33.333 0.00 0.00 41.37 2.39
9304 11269 9.692749 CAAACAGAGTACAATATACGGATGTAT 57.307 33.333 0.00 0.00 43.62 2.29
9305 11270 8.905850 TCAAACAGAGTACAATATACGGATGTA 58.094 33.333 0.00 0.00 34.45 2.29
9306 11271 7.778083 TCAAACAGAGTACAATATACGGATGT 58.222 34.615 0.00 0.00 0.00 3.06
9307 11272 8.642908 TTCAAACAGAGTACAATATACGGATG 57.357 34.615 0.00 0.00 0.00 3.51
9308 11273 9.832445 ATTTCAAACAGAGTACAATATACGGAT 57.168 29.630 0.00 0.00 0.00 4.18
9309 11274 9.093970 CATTTCAAACAGAGTACAATATACGGA 57.906 33.333 0.00 0.00 0.00 4.69
9310 11275 8.879759 ACATTTCAAACAGAGTACAATATACGG 58.120 33.333 0.00 0.00 0.00 4.02
9311 11276 9.901724 GACATTTCAAACAGAGTACAATATACG 57.098 33.333 0.00 0.00 0.00 3.06
9316 11281 9.778741 TTCTAGACATTTCAAACAGAGTACAAT 57.221 29.630 0.00 0.00 0.00 2.71
9317 11282 9.607988 TTTCTAGACATTTCAAACAGAGTACAA 57.392 29.630 0.00 0.00 0.00 2.41
9318 11283 9.607988 TTTTCTAGACATTTCAAACAGAGTACA 57.392 29.630 0.00 0.00 0.00 2.90
9321 11286 8.956426 TGTTTTTCTAGACATTTCAAACAGAGT 58.044 29.630 0.00 0.00 31.00 3.24
9322 11287 9.787532 TTGTTTTTCTAGACATTTCAAACAGAG 57.212 29.630 0.00 0.00 34.92 3.35
9339 11304 8.520351 CCTCCGTTCCTAAATATTTGTTTTTCT 58.480 33.333 11.05 0.00 0.00 2.52
9340 11305 7.758076 CCCTCCGTTCCTAAATATTTGTTTTTC 59.242 37.037 11.05 0.00 0.00 2.29
9341 11306 7.452189 TCCCTCCGTTCCTAAATATTTGTTTTT 59.548 33.333 11.05 0.00 0.00 1.94
9342 11307 6.949463 TCCCTCCGTTCCTAAATATTTGTTTT 59.051 34.615 11.05 0.00 0.00 2.43
9343 11308 6.486941 TCCCTCCGTTCCTAAATATTTGTTT 58.513 36.000 11.05 0.00 0.00 2.83
9344 11309 6.069705 TCCCTCCGTTCCTAAATATTTGTT 57.930 37.500 11.05 0.00 0.00 2.83
9345 11310 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
9346 11311 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
9347 11312 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
9348 11313 5.011840 GCTACTCCCTCCGTTCCTAAATATT 59.988 44.000 0.00 0.00 0.00 1.28
9349 11314 4.527427 GCTACTCCCTCCGTTCCTAAATAT 59.473 45.833 0.00 0.00 0.00 1.28
9350 11315 3.893813 GCTACTCCCTCCGTTCCTAAATA 59.106 47.826 0.00 0.00 0.00 1.40
9351 11316 2.699321 GCTACTCCCTCCGTTCCTAAAT 59.301 50.000 0.00 0.00 0.00 1.40
9352 11317 2.105766 GCTACTCCCTCCGTTCCTAAA 58.894 52.381 0.00 0.00 0.00 1.85
9353 11318 1.287146 AGCTACTCCCTCCGTTCCTAA 59.713 52.381 0.00 0.00 0.00 2.69
9354 11319 0.924823 AGCTACTCCCTCCGTTCCTA 59.075 55.000 0.00 0.00 0.00 2.94
9355 11320 0.041386 AAGCTACTCCCTCCGTTCCT 59.959 55.000 0.00 0.00 0.00 3.36
9356 11321 0.903236 AAAGCTACTCCCTCCGTTCC 59.097 55.000 0.00 0.00 0.00 3.62
9357 11322 2.742589 CAAAAAGCTACTCCCTCCGTTC 59.257 50.000 0.00 0.00 0.00 3.95
9358 11323 2.105993 ACAAAAAGCTACTCCCTCCGTT 59.894 45.455 0.00 0.00 0.00 4.44
9359 11324 1.697982 ACAAAAAGCTACTCCCTCCGT 59.302 47.619 0.00 0.00 0.00 4.69
9360 11325 2.474410 ACAAAAAGCTACTCCCTCCG 57.526 50.000 0.00 0.00 0.00 4.63
9361 11326 4.142038 TGAAACAAAAAGCTACTCCCTCC 58.858 43.478 0.00 0.00 0.00 4.30
9362 11327 4.822350 ACTGAAACAAAAAGCTACTCCCTC 59.178 41.667 0.00 0.00 0.00 4.30
9363 11328 4.580580 CACTGAAACAAAAAGCTACTCCCT 59.419 41.667 0.00 0.00 0.00 4.20
9364 11329 4.793028 GCACTGAAACAAAAAGCTACTCCC 60.793 45.833 0.00 0.00 0.00 4.30
9365 11330 4.036852 AGCACTGAAACAAAAAGCTACTCC 59.963 41.667 0.00 0.00 0.00 3.85
9366 11331 5.175090 AGCACTGAAACAAAAAGCTACTC 57.825 39.130 0.00 0.00 0.00 2.59
9367 11332 5.582689 AAGCACTGAAACAAAAAGCTACT 57.417 34.783 0.00 0.00 0.00 2.57
9368 11333 6.310224 TCAAAAGCACTGAAACAAAAAGCTAC 59.690 34.615 0.00 0.00 0.00 3.58
9464 11429 2.760650 TGTGAGTTCTGCATATCCGAGT 59.239 45.455 0.00 0.00 0.00 4.18
9512 11477 8.188139 TCATCCACTTGAAAGTTCTTGTAAAAC 58.812 33.333 0.00 0.00 37.08 2.43
9524 11489 5.291858 TCGATCGATTTCATCCACTTGAAAG 59.708 40.000 15.15 0.00 45.83 2.62
9539 11504 2.370349 ACTGAGACCACTCGATCGATT 58.630 47.619 19.78 10.67 45.25 3.34
9572 11537 3.785521 CGTTCAATCCATAAACATGTGCG 59.214 43.478 0.00 0.00 0.00 5.34
9596 11561 3.368427 CCACCGTCTCTCTTGCTTGAATA 60.368 47.826 0.00 0.00 0.00 1.75
9606 11571 1.339151 GGCAAATTCCACCGTCTCTCT 60.339 52.381 0.00 0.00 0.00 3.10
9611 11576 1.212751 GCTGGCAAATTCCACCGTC 59.787 57.895 0.00 0.00 31.74 4.79
9613 11578 2.179018 CGCTGGCAAATTCCACCG 59.821 61.111 0.00 0.00 31.74 4.94
9654 11619 1.001641 AGTGGCATGTGGGCTTCTC 60.002 57.895 0.00 0.00 43.83 2.87
9687 11653 0.612732 CCCTCTGTGGTACCGTGGTA 60.613 60.000 7.57 0.00 0.00 3.25
9688 11654 1.911766 CCCTCTGTGGTACCGTGGT 60.912 63.158 7.57 0.00 0.00 4.16
9689 11655 0.612732 TACCCTCTGTGGTACCGTGG 60.613 60.000 7.57 3.51 39.91 4.94
9690 11656 1.407979 GATACCCTCTGTGGTACCGTG 59.592 57.143 7.57 0.00 43.45 4.94
9691 11657 1.772836 GATACCCTCTGTGGTACCGT 58.227 55.000 7.57 0.00 43.45 4.83
9692 11658 0.666913 CGATACCCTCTGTGGTACCG 59.333 60.000 7.57 0.00 41.28 4.02
9693 11659 1.038280 CCGATACCCTCTGTGGTACC 58.962 60.000 4.43 4.43 43.45 3.34
9711 11677 1.690219 ATGGAGATCACGAGGCCACC 61.690 60.000 5.01 0.00 0.00 4.61
9763 11729 0.102481 ACGCACGGGCATTCTACTAG 59.898 55.000 11.77 0.00 41.24 2.57
9764 11730 0.533491 AACGCACGGGCATTCTACTA 59.467 50.000 11.77 0.00 41.24 1.82
9765 11731 1.019278 CAACGCACGGGCATTCTACT 61.019 55.000 11.77 0.00 41.24 2.57
9766 11732 1.423845 CAACGCACGGGCATTCTAC 59.576 57.895 11.77 0.00 41.24 2.59
9767 11733 2.395360 GCAACGCACGGGCATTCTA 61.395 57.895 11.77 0.00 41.24 2.10
9768 11734 3.737172 GCAACGCACGGGCATTCT 61.737 61.111 11.77 0.00 41.24 2.40
9769 11735 4.776647 GGCAACGCACGGGCATTC 62.777 66.667 11.77 0.00 41.24 2.67



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.