Multiple sequence alignment - TraesCS6A01G166100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G166100 chr6A 100.000 8211 0 0 1 8211 168126356 168118146 0.000000e+00 15163.0
1 TraesCS6A01G166100 chr6B 94.061 2812 114 21 5428 8211 228245268 228242482 0.000000e+00 4218.0
2 TraesCS6A01G166100 chr6B 94.689 2090 65 23 515 2595 228249843 228247791 0.000000e+00 3203.0
3 TraesCS6A01G166100 chr6B 96.286 1777 52 9 2721 4490 228247792 228246023 0.000000e+00 2904.0
4 TraesCS6A01G166100 chr6B 97.665 471 10 1 4845 5314 228245736 228245266 0.000000e+00 808.0
5 TraesCS6A01G166100 chr6B 96.000 275 11 0 4585 4859 228246023 228245749 1.630000e-121 448.0
6 TraesCS6A01G166100 chr6B 95.556 135 6 0 2596 2730 191198133 191197999 4.990000e-52 217.0
7 TraesCS6A01G166100 chr6B 92.568 148 9 1 2579 2726 660666029 660665884 2.320000e-50 211.0
8 TraesCS6A01G166100 chr6B 98.214 56 1 0 7853 7908 228242867 228242812 1.890000e-16 99.0
9 TraesCS6A01G166100 chr6B 100.000 29 0 0 8032 8060 164360311 164360283 4.000000e-03 54.7
10 TraesCS6A01G166100 chr6D 93.961 2815 115 21 5428 8211 129786810 129784020 0.000000e+00 4205.0
11 TraesCS6A01G166100 chr6D 96.053 2103 56 8 499 2597 129791372 129789293 0.000000e+00 3398.0
12 TraesCS6A01G166100 chr6D 98.015 1763 25 4 2721 4482 129789294 129787541 0.000000e+00 3053.0
13 TraesCS6A01G166100 chr6D 97.411 734 18 1 4582 5314 129787541 129786808 0.000000e+00 1249.0
14 TraesCS6A01G166100 chr6D 81.328 241 26 7 1 222 129791616 129791376 2.350000e-40 178.0
15 TraesCS6A01G166100 chr6D 90.566 106 9 1 4489 4594 18672181 18672077 1.110000e-28 139.0
16 TraesCS6A01G166100 chr6D 96.296 54 2 0 7855 7908 129784403 129784350 1.140000e-13 89.8
17 TraesCS6A01G166100 chr6D 100.000 29 0 0 8032 8060 86661059 86661031 4.000000e-03 54.7
18 TraesCS6A01G166100 chr5D 83.214 280 36 5 223 491 174279504 174279225 6.360000e-61 246.0
19 TraesCS6A01G166100 chr5D 81.481 297 31 8 223 496 556861360 556861655 1.070000e-53 222.0
20 TraesCS6A01G166100 chr5D 94.488 127 7 0 5307 5433 416427884 416428010 6.500000e-46 196.0
21 TraesCS6A01G166100 chr5D 91.346 104 9 0 4489 4592 65990587 65990484 8.590000e-30 143.0
22 TraesCS6A01G166100 chr5D 88.983 118 10 2 4476 4592 205794756 205794641 8.590000e-30 143.0
23 TraesCS6A01G166100 chr5D 92.079 101 8 0 4489 4589 558970531 558970431 8.590000e-30 143.0
24 TraesCS6A01G166100 chr5D 88.393 112 12 1 4489 4599 9123992 9123881 5.170000e-27 134.0
25 TraesCS6A01G166100 chr5D 90.909 44 3 1 8033 8075 458094790 458094833 3.200000e-04 58.4
26 TraesCS6A01G166100 chr5D 100.000 31 0 0 8032 8062 458180053 458180083 3.200000e-04 58.4
27 TraesCS6A01G166100 chr1A 84.362 243 29 5 262 495 385670162 385669920 6.410000e-56 230.0
28 TraesCS6A01G166100 chr1A 93.478 138 6 3 5310 5446 459516908 459516773 1.400000e-47 202.0
29 TraesCS6A01G166100 chr4B 96.992 133 3 1 2596 2728 82019122 82019253 1.070000e-53 222.0
30 TraesCS6A01G166100 chr4B 95.588 136 5 1 2592 2727 107450738 107450872 4.990000e-52 217.0
31 TraesCS6A01G166100 chr4B 100.000 28 0 0 8033 8060 27252524 27252497 1.500000e-02 52.8
32 TraesCS6A01G166100 chr4B 100.000 28 0 0 8033 8060 27518972 27518999 1.500000e-02 52.8
33 TraesCS6A01G166100 chr2A 95.683 139 4 2 2596 2733 753433002 753433139 1.070000e-53 222.0
34 TraesCS6A01G166100 chr2A 93.793 145 3 6 2595 2735 313820290 313820148 6.460000e-51 213.0
35 TraesCS6A01G166100 chr2A 79.381 291 33 11 223 496 94339283 94339563 6.550000e-41 180.0
36 TraesCS6A01G166100 chr2A 91.346 104 9 0 4489 4592 660286871 660286768 8.590000e-30 143.0
37 TraesCS6A01G166100 chr2A 75.836 269 36 13 240 479 205231065 205230797 8.710000e-20 110.0
38 TraesCS6A01G166100 chr1D 83.740 246 28 6 262 495 445570025 445570270 1.070000e-53 222.0
39 TraesCS6A01G166100 chr2B 95.652 138 5 1 2596 2733 517437009 517436873 3.860000e-53 220.0
40 TraesCS6A01G166100 chr2B 94.964 139 4 3 2588 2726 578606370 578606505 1.790000e-51 215.0
41 TraesCS6A01G166100 chr2B 90.566 106 9 1 4489 4594 230532519 230532415 1.110000e-28 139.0
42 TraesCS6A01G166100 chr7A 80.919 283 45 5 216 495 719720505 719720781 1.790000e-51 215.0
43 TraesCS6A01G166100 chr7A 94.118 102 6 0 4489 4590 61816018 61815917 1.100000e-33 156.0
44 TraesCS6A01G166100 chr4A 93.706 143 7 2 2596 2736 735752029 735751887 6.460000e-51 213.0
45 TraesCS6A01G166100 chr4A 78.000 300 38 12 223 495 613571740 613571442 6.590000e-36 163.0
46 TraesCS6A01G166100 chr3D 83.004 253 25 9 262 498 511530552 511530302 6.460000e-51 213.0
47 TraesCS6A01G166100 chr5A 96.721 122 2 2 5313 5433 108623796 108623916 1.400000e-47 202.0
48 TraesCS6A01G166100 chr5A 90.323 62 6 0 262 323 696929693 696929632 1.900000e-11 82.4
49 TraesCS6A01G166100 chr5A 91.111 45 3 1 8032 8075 576084876 576084920 8.900000e-05 60.2
50 TraesCS6A01G166100 chr5A 91.111 45 3 1 8032 8075 576272555 576272511 8.900000e-05 60.2
51 TraesCS6A01G166100 chr5A 90.909 44 3 1 8033 8075 575706039 575706082 3.200000e-04 58.4
52 TraesCS6A01G166100 chr2D 96.667 120 4 0 5308 5427 294973451 294973570 5.030000e-47 200.0
53 TraesCS6A01G166100 chr2D 94.615 130 3 4 5306 5433 548272127 548272254 1.810000e-46 198.0
54 TraesCS6A01G166100 chr2D 94.488 127 7 0 5313 5439 114520401 114520275 6.500000e-46 196.0
55 TraesCS6A01G166100 chr2D 92.308 104 7 1 4485 4587 445894985 445894882 6.640000e-31 147.0
56 TraesCS6A01G166100 chr3A 95.902 122 5 0 5312 5433 272731 272610 1.810000e-46 198.0
57 TraesCS6A01G166100 chr4D 94.531 128 6 1 5308 5434 55352436 55352563 6.500000e-46 196.0
58 TraesCS6A01G166100 chr4D 100.000 28 0 0 8033 8060 15912211 15912238 1.500000e-02 52.8
59 TraesCS6A01G166100 chr3B 92.593 135 10 0 5297 5431 658489534 658489668 2.340000e-45 195.0
60 TraesCS6A01G166100 chr1B 81.781 247 31 8 262 495 528497473 528497228 2.340000e-45 195.0
61 TraesCS6A01G166100 chr7B 81.092 238 26 9 262 495 720475598 720475376 1.100000e-38 172.0
62 TraesCS6A01G166100 chr5B 78.947 285 32 14 223 479 379164783 379164499 1.420000e-37 169.0
63 TraesCS6A01G166100 chr5B 90.909 44 3 1 8033 8075 560441440 560441483 3.200000e-04 58.4
64 TraesCS6A01G166100 chr5B 88.889 45 4 1 8032 8075 561061783 561061827 4.000000e-03 54.7
65 TraesCS6A01G166100 chr5B 100.000 28 0 0 223 250 513616503 513616476 1.500000e-02 52.8
66 TraesCS6A01G166100 chr7D 91.935 62 5 0 262 323 411890752 411890691 4.080000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G166100 chr6A 168118146 168126356 8210 True 15163.000000 15163 100.0000 1 8211 1 chr6A.!!$R1 8210
1 TraesCS6A01G166100 chr6B 228242482 228249843 7361 True 1946.666667 4218 96.1525 515 8211 6 chr6B.!!$R4 7696
2 TraesCS6A01G166100 chr6D 129784020 129791616 7596 True 2028.800000 4205 93.8440 1 8211 6 chr6D.!!$R3 8210

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
394 414 0.039888 CTTTTACGTGTTTGGGCCGG 60.040 55.0 0.00 0.00 0.00 6.13 F
698 718 0.399233 ATCCTTCCTCTTCCCTCCCG 60.399 60.0 0.00 0.00 0.00 5.14 F
2008 2040 1.180029 GGTGCTTTGATGCCTCATGT 58.820 50.0 0.00 0.00 0.00 3.21 F
3451 3484 0.036010 ACCCTTGAGGATCTTGTGCG 60.036 55.0 0.00 0.00 39.89 5.34 F
3621 3654 0.395862 TCCTCGACCTCCATCTCCAC 60.396 60.0 0.00 0.00 0.00 4.02 F
5326 5400 0.818296 CCTTGTACTCCCTCTGTCCG 59.182 60.0 0.00 0.00 0.00 4.79 F
5353 5427 0.110486 TTGTCCCAAGCTTGTCCCTC 59.890 55.0 24.35 10.65 0.00 4.30 F
7027 7124 0.753867 TGTCCAGAGCAACACGGTAA 59.246 50.0 0.00 0.00 0.00 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1565 1597 0.236449 CACGGTAACCAAAGAACGGC 59.764 55.0 0.00 0.00 0.00 5.68 R
2697 2729 0.865769 CCTCCGTCCGAAAACACTTG 59.134 55.0 0.00 0.00 0.00 3.16 R
3619 3652 1.127567 TGAAGGTGGAGGTGGAGGTG 61.128 60.0 0.00 0.00 0.00 4.00 R
5336 5410 0.110486 TTGAGGGACAAGCTTGGGAC 59.890 55.0 29.18 18.90 34.20 4.46 R
5337 5411 0.850100 TTTGAGGGACAAGCTTGGGA 59.150 50.0 29.18 4.51 39.77 4.37 R
6852 6949 0.315251 CTCGAGCTGTCAGTTGTCCA 59.685 55.0 0.00 0.00 0.00 4.02 R
7165 7262 0.392193 CACCCTGGCTGACTGATCAC 60.392 60.0 0.00 0.00 0.00 3.06 R
8122 8250 0.868406 CGGAGAACAAGAACAGGTGC 59.132 55.0 0.00 0.00 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.381961 ACTCCAAATACACCCCCACAAT 59.618 45.455 0.00 0.00 0.00 2.71
30 31 3.181412 ACTCCAAATACACCCCCACAATT 60.181 43.478 0.00 0.00 0.00 2.32
33 34 3.056179 CCAAATACACCCCCACAATTGTC 60.056 47.826 8.48 0.00 0.00 3.18
35 36 2.577606 TACACCCCCACAATTGTCAG 57.422 50.000 8.48 3.01 0.00 3.51
40 41 4.476846 ACACCCCCACAATTGTCAGATATA 59.523 41.667 8.48 0.00 0.00 0.86
69 70 3.460857 AGGATGAAATGGCGACTCTAC 57.539 47.619 0.00 0.00 0.00 2.59
70 71 3.034635 AGGATGAAATGGCGACTCTACT 58.965 45.455 0.00 0.00 0.00 2.57
81 82 4.222145 TGGCGACTCTACTATGACCTTTTT 59.778 41.667 0.00 0.00 0.00 1.94
85 86 7.169476 GGCGACTCTACTATGACCTTTTTAATC 59.831 40.741 0.00 0.00 0.00 1.75
160 178 8.673626 AAAAACATATGACGACATTGCTAAAG 57.326 30.769 10.38 0.00 37.87 1.85
166 184 4.311606 TGACGACATTGCTAAAGTTGCTA 58.688 39.130 0.00 0.00 0.00 3.49
171 189 8.657074 ACGACATTGCTAAAGTTGCTATTATA 57.343 30.769 0.00 0.00 0.00 0.98
173 191 8.765219 CGACATTGCTAAAGTTGCTATTATACT 58.235 33.333 0.00 0.00 0.00 2.12
174 192 9.869844 GACATTGCTAAAGTTGCTATTATACTG 57.130 33.333 0.00 0.00 0.00 2.74
175 193 8.345565 ACATTGCTAAAGTTGCTATTATACTGC 58.654 33.333 0.00 0.00 0.00 4.40
186 204 9.869844 GTTGCTATTATACTGCTTAAGTGAATG 57.130 33.333 4.02 0.00 40.26 2.67
187 205 8.087982 TGCTATTATACTGCTTAAGTGAATGC 57.912 34.615 4.02 0.00 40.26 3.56
205 225 1.152383 GCCGAAAGATAGCCACGGTC 61.152 60.000 0.00 0.00 44.48 4.79
222 242 1.254954 GTCTTGTGTAGACCGGGACT 58.745 55.000 6.32 7.60 46.30 3.85
223 243 2.440409 GTCTTGTGTAGACCGGGACTA 58.560 52.381 6.32 6.47 46.30 2.59
224 244 2.422832 GTCTTGTGTAGACCGGGACTAG 59.577 54.545 6.32 0.91 46.30 2.57
225 245 2.040813 TCTTGTGTAGACCGGGACTAGT 59.959 50.000 6.32 0.00 0.00 2.57
226 246 2.119801 TGTGTAGACCGGGACTAGTC 57.880 55.000 14.87 14.87 0.00 2.59
236 256 1.832912 GGACTAGTCCTGGCCATGG 59.167 63.158 31.12 7.63 46.16 3.66
237 257 1.700042 GGACTAGTCCTGGCCATGGG 61.700 65.000 31.12 4.96 46.16 4.00
238 258 0.691078 GACTAGTCCTGGCCATGGGA 60.691 60.000 15.13 8.01 0.00 4.37
239 259 0.253160 ACTAGTCCTGGCCATGGGAA 60.253 55.000 15.05 0.57 33.01 3.97
240 260 0.471617 CTAGTCCTGGCCATGGGAAG 59.528 60.000 15.05 6.80 33.01 3.46
241 261 1.635817 TAGTCCTGGCCATGGGAAGC 61.636 60.000 15.05 4.61 33.01 3.86
252 272 4.360405 GGGAAGCCCAGCCCGAAA 62.360 66.667 0.00 0.00 44.65 3.46
253 273 2.282887 GGAAGCCCAGCCCGAAAA 60.283 61.111 0.00 0.00 0.00 2.29
254 274 1.682344 GGAAGCCCAGCCCGAAAAT 60.682 57.895 0.00 0.00 0.00 1.82
255 275 1.512694 GAAGCCCAGCCCGAAAATG 59.487 57.895 0.00 0.00 0.00 2.32
256 276 2.563050 GAAGCCCAGCCCGAAAATGC 62.563 60.000 0.00 0.00 0.00 3.56
257 277 3.070576 GCCCAGCCCGAAAATGCT 61.071 61.111 0.00 0.00 38.67 3.79
258 278 2.649129 GCCCAGCCCGAAAATGCTT 61.649 57.895 0.00 0.00 35.12 3.91
259 279 1.216178 CCCAGCCCGAAAATGCTTG 59.784 57.895 0.00 0.00 35.12 4.01
260 280 1.250154 CCCAGCCCGAAAATGCTTGA 61.250 55.000 0.00 0.00 35.12 3.02
261 281 0.109132 CCAGCCCGAAAATGCTTGAC 60.109 55.000 0.00 0.00 35.12 3.18
262 282 0.109132 CAGCCCGAAAATGCTTGACC 60.109 55.000 0.00 0.00 35.12 4.02
263 283 1.215382 GCCCGAAAATGCTTGACCC 59.785 57.895 0.00 0.00 0.00 4.46
264 284 1.506262 CCCGAAAATGCTTGACCCG 59.494 57.895 0.00 0.00 0.00 5.28
265 285 1.506262 CCGAAAATGCTTGACCCGG 59.494 57.895 0.00 0.00 0.00 5.73
266 286 1.154035 CGAAAATGCTTGACCCGGC 60.154 57.895 0.00 0.00 0.00 6.13
267 287 1.215382 GAAAATGCTTGACCCGGCC 59.785 57.895 0.00 0.00 0.00 6.13
268 288 2.225791 GAAAATGCTTGACCCGGCCC 62.226 60.000 0.00 0.00 0.00 5.80
306 326 3.780624 GCTCGGGCCTAGATTTTGA 57.219 52.632 9.63 0.00 0.00 2.69
307 327 1.587547 GCTCGGGCCTAGATTTTGAG 58.412 55.000 9.63 2.79 0.00 3.02
308 328 1.587547 CTCGGGCCTAGATTTTGAGC 58.412 55.000 0.84 0.00 0.00 4.26
309 329 1.139853 CTCGGGCCTAGATTTTGAGCT 59.860 52.381 0.84 0.00 0.00 4.09
310 330 1.139058 TCGGGCCTAGATTTTGAGCTC 59.861 52.381 6.82 6.82 0.00 4.09
311 331 1.587547 GGGCCTAGATTTTGAGCTCG 58.412 55.000 9.64 0.00 0.00 5.03
312 332 1.139058 GGGCCTAGATTTTGAGCTCGA 59.861 52.381 9.64 3.88 0.00 4.04
313 333 2.205911 GGCCTAGATTTTGAGCTCGAC 58.794 52.381 9.64 0.00 0.00 4.20
314 334 1.855360 GCCTAGATTTTGAGCTCGACG 59.145 52.381 9.64 0.00 0.00 5.12
315 335 2.464865 CCTAGATTTTGAGCTCGACGG 58.535 52.381 9.64 0.00 0.00 4.79
316 336 1.855360 CTAGATTTTGAGCTCGACGGC 59.145 52.381 9.64 0.00 0.00 5.68
317 337 0.741221 AGATTTTGAGCTCGACGGCC 60.741 55.000 9.64 0.00 0.00 6.13
318 338 2.025359 GATTTTGAGCTCGACGGCCG 62.025 60.000 26.86 26.86 40.25 6.13
319 339 4.735132 TTTGAGCTCGACGGCCGG 62.735 66.667 31.76 13.23 39.14 6.13
337 357 3.432186 GCCCGCGCCTATCATTTT 58.568 55.556 0.00 0.00 0.00 1.82
338 358 1.733526 GCCCGCGCCTATCATTTTT 59.266 52.632 0.00 0.00 0.00 1.94
339 359 0.594796 GCCCGCGCCTATCATTTTTG 60.595 55.000 0.00 0.00 0.00 2.44
340 360 0.594796 CCCGCGCCTATCATTTTTGC 60.595 55.000 0.00 0.00 0.00 3.68
341 361 0.100325 CCGCGCCTATCATTTTTGCA 59.900 50.000 0.00 0.00 0.00 4.08
342 362 1.269206 CCGCGCCTATCATTTTTGCAT 60.269 47.619 0.00 0.00 0.00 3.96
343 363 2.462889 CGCGCCTATCATTTTTGCATT 58.537 42.857 0.00 0.00 0.00 3.56
344 364 2.859538 CGCGCCTATCATTTTTGCATTT 59.140 40.909 0.00 0.00 0.00 2.32
345 365 3.306703 CGCGCCTATCATTTTTGCATTTT 59.693 39.130 0.00 0.00 0.00 1.82
346 366 4.201705 CGCGCCTATCATTTTTGCATTTTT 60.202 37.500 0.00 0.00 0.00 1.94
360 380 2.920384 TTTTTGAAGGGGCCGGCC 60.920 61.111 38.57 38.57 0.00 6.13
383 403 2.359478 CCCGGCAGGCTTTTACGT 60.359 61.111 0.00 0.00 35.76 3.57
384 404 2.686816 CCCGGCAGGCTTTTACGTG 61.687 63.158 0.00 0.00 35.76 4.49
385 405 1.964373 CCGGCAGGCTTTTACGTGT 60.964 57.895 0.00 0.00 0.00 4.49
386 406 1.512156 CCGGCAGGCTTTTACGTGTT 61.512 55.000 0.00 0.00 0.00 3.32
387 407 0.309612 CGGCAGGCTTTTACGTGTTT 59.690 50.000 0.00 0.00 0.00 2.83
388 408 1.766069 GGCAGGCTTTTACGTGTTTG 58.234 50.000 0.00 0.00 0.00 2.93
389 409 1.601914 GGCAGGCTTTTACGTGTTTGG 60.602 52.381 0.00 0.00 0.00 3.28
390 410 1.601914 GCAGGCTTTTACGTGTTTGGG 60.602 52.381 0.00 0.00 0.00 4.12
391 411 0.671796 AGGCTTTTACGTGTTTGGGC 59.328 50.000 0.00 0.00 0.00 5.36
392 412 0.319211 GGCTTTTACGTGTTTGGGCC 60.319 55.000 0.00 0.00 0.00 5.80
393 413 0.662077 GCTTTTACGTGTTTGGGCCG 60.662 55.000 0.00 0.00 0.00 6.13
394 414 0.039888 CTTTTACGTGTTTGGGCCGG 60.040 55.000 0.00 0.00 0.00 6.13
395 415 0.465097 TTTTACGTGTTTGGGCCGGA 60.465 50.000 5.05 0.00 0.00 5.14
396 416 1.165284 TTTACGTGTTTGGGCCGGAC 61.165 55.000 5.05 0.00 0.00 4.79
397 417 2.042404 TTACGTGTTTGGGCCGGACT 62.042 55.000 7.57 0.00 0.00 3.85
398 418 2.042404 TACGTGTTTGGGCCGGACTT 62.042 55.000 7.57 0.00 0.00 3.01
399 419 2.903547 CGTGTTTGGGCCGGACTTG 61.904 63.158 7.57 0.00 0.00 3.16
400 420 2.203422 TGTTTGGGCCGGACTTGG 60.203 61.111 7.57 0.00 0.00 3.61
401 421 2.203437 GTTTGGGCCGGACTTGGT 60.203 61.111 7.57 0.00 0.00 3.67
402 422 2.114411 TTTGGGCCGGACTTGGTC 59.886 61.111 7.57 0.00 0.00 4.02
434 454 3.131478 CGATGGCCGGGTCAAACC 61.131 66.667 4.95 0.00 37.60 3.27
443 463 2.989253 GGTCAAACCCGGGCCTTG 60.989 66.667 24.08 24.01 30.04 3.61
444 464 2.989253 GTCAAACCCGGGCCTTGG 60.989 66.667 27.38 12.91 0.00 3.61
445 465 3.503839 TCAAACCCGGGCCTTGGT 61.504 61.111 27.38 10.52 36.06 3.67
446 466 2.523168 CAAACCCGGGCCTTGGTT 60.523 61.111 24.08 19.79 46.63 3.67
448 468 2.284151 AACCCGGGCCTTGGTTTT 59.716 55.556 24.08 0.49 42.09 2.43
449 469 1.383386 AACCCGGGCCTTGGTTTTT 60.383 52.632 24.08 0.00 42.09 1.94
491 511 3.966543 CCCGAGGTTTGGCCAGGT 61.967 66.667 5.11 0.00 40.61 4.00
492 512 2.598787 CCCGAGGTTTGGCCAGGTA 61.599 63.158 5.11 0.00 40.61 3.08
493 513 1.607612 CCGAGGTTTGGCCAGGTAT 59.392 57.895 5.11 0.00 40.61 2.73
494 514 0.834612 CCGAGGTTTGGCCAGGTATA 59.165 55.000 5.11 0.00 40.61 1.47
495 515 1.420138 CCGAGGTTTGGCCAGGTATAT 59.580 52.381 5.11 0.00 40.61 0.86
496 516 2.550208 CCGAGGTTTGGCCAGGTATATC 60.550 54.545 5.11 0.00 40.61 1.63
497 517 2.368875 CGAGGTTTGGCCAGGTATATCT 59.631 50.000 5.11 0.00 40.61 1.98
498 518 3.744660 GAGGTTTGGCCAGGTATATCTG 58.255 50.000 5.11 5.98 40.61 2.90
509 529 4.107072 CAGGTATATCTGGGACCCATCAT 58.893 47.826 15.39 11.83 33.40 2.45
519 539 2.170166 GGACCCATCATGCTGTTTTCA 58.830 47.619 0.00 0.00 0.00 2.69
597 617 3.076278 CCCCGTAACGGCCTACCA 61.076 66.667 0.00 0.00 46.86 3.25
654 674 3.736094 TCTCTTCCTCCTCTCTCTCTCT 58.264 50.000 0.00 0.00 0.00 3.10
655 675 3.711704 TCTCTTCCTCCTCTCTCTCTCTC 59.288 52.174 0.00 0.00 0.00 3.20
656 676 3.713764 CTCTTCCTCCTCTCTCTCTCTCT 59.286 52.174 0.00 0.00 0.00 3.10
657 677 3.711704 TCTTCCTCCTCTCTCTCTCTCTC 59.288 52.174 0.00 0.00 0.00 3.20
658 678 3.421394 TCCTCCTCTCTCTCTCTCTCT 57.579 52.381 0.00 0.00 0.00 3.10
659 679 3.309296 TCCTCCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
660 680 3.051803 TCCTCCTCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
661 681 3.323403 CCTCCTCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
662 682 4.222336 CTCCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
663 683 4.219115 TCCTCTCTCTCTCTCTCTCTCTC 58.781 52.174 0.00 0.00 0.00 3.20
664 684 4.078922 TCCTCTCTCTCTCTCTCTCTCTCT 60.079 50.000 0.00 0.00 0.00 3.10
665 685 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
666 686 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
667 687 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
668 688 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
669 689 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
670 690 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
671 691 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
698 718 0.399233 ATCCTTCCTCTTCCCTCCCG 60.399 60.000 0.00 0.00 0.00 5.14
793 813 4.537433 GCCTCTGCGGGCGATTCT 62.537 66.667 0.00 0.00 42.82 2.40
961 982 4.675029 GTGTGGCTACGGTGCGGT 62.675 66.667 0.00 0.00 0.00 5.68
1269 1301 4.695993 TGCGCGCTGGTGGATTGA 62.696 61.111 33.29 4.14 0.00 2.57
1368 1400 3.117550 TCTGGGGTCATTGGATATGGTTG 60.118 47.826 0.00 0.00 0.00 3.77
1438 1470 3.061295 CCGCATCGATGATGTACTTATGC 59.939 47.826 29.20 9.33 41.60 3.14
1442 1474 5.863935 GCATCGATGATGTACTTATGCAGTA 59.136 40.000 29.20 0.00 41.60 2.74
1567 1599 2.742774 CAGGTTTACTGCTTTGTTGCC 58.257 47.619 0.00 0.00 40.97 4.52
1758 1790 9.284968 CTATGTAATCCCCGTTCAATTCTTAAT 57.715 33.333 0.00 0.00 0.00 1.40
1792 1824 8.736244 TCAGTTTTGCCTGTAAATTTATAGGAC 58.264 33.333 33.40 25.70 42.66 3.85
1966 1998 5.179045 ACCGATCATGATTCTGCAATTTC 57.821 39.130 10.14 0.00 0.00 2.17
2008 2040 1.180029 GGTGCTTTGATGCCTCATGT 58.820 50.000 0.00 0.00 0.00 3.21
2143 2175 7.174946 AGCTGGGTCGAATACATTTAAATATGG 59.825 37.037 0.00 0.00 0.00 2.74
2432 2464 9.787435 GTTACAATGTATGGTTCCCATATCTTA 57.213 33.333 6.27 0.00 46.48 2.10
2487 2519 9.661187 CATACATCTCTTGTGAAATAAATGAGC 57.339 33.333 0.00 0.00 39.48 4.26
2604 2636 7.673641 ATGAATCATCAGATATACTCCCTCC 57.326 40.000 0.00 0.00 39.39 4.30
2605 2637 5.654209 TGAATCATCAGATATACTCCCTCCG 59.346 44.000 0.00 0.00 33.08 4.63
2606 2638 4.659529 TCATCAGATATACTCCCTCCGT 57.340 45.455 0.00 0.00 0.00 4.69
2607 2639 4.590918 TCATCAGATATACTCCCTCCGTC 58.409 47.826 0.00 0.00 0.00 4.79
2608 2640 3.436577 TCAGATATACTCCCTCCGTCC 57.563 52.381 0.00 0.00 0.00 4.79
2609 2641 2.085320 CAGATATACTCCCTCCGTCCG 58.915 57.143 0.00 0.00 0.00 4.79
2610 2642 1.983691 AGATATACTCCCTCCGTCCGA 59.016 52.381 0.00 0.00 0.00 4.55
2611 2643 2.374504 AGATATACTCCCTCCGTCCGAA 59.625 50.000 0.00 0.00 0.00 4.30
2612 2644 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
2613 2645 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
2614 2646 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
2615 2647 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2616 2648 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2617 2649 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2618 2650 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2619 2651 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2620 2652 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2621 2653 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2622 2654 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2623 2655 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2624 2656 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2625 2657 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2626 2658 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2627 2659 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2628 2660 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2629 2661 6.302313 CGTCCGAAAATACTTGTCATCAAAAC 59.698 38.462 0.00 0.00 32.87 2.43
2630 2662 6.302313 GTCCGAAAATACTTGTCATCAAAACG 59.698 38.462 0.00 0.00 32.87 3.60
2631 2663 6.203145 TCCGAAAATACTTGTCATCAAAACGA 59.797 34.615 0.00 0.00 32.87 3.85
2632 2664 6.853872 CCGAAAATACTTGTCATCAAAACGAA 59.146 34.615 0.00 0.00 32.87 3.85
2633 2665 7.537306 CCGAAAATACTTGTCATCAAAACGAAT 59.463 33.333 0.00 0.00 32.87 3.34
2634 2666 9.536558 CGAAAATACTTGTCATCAAAACGAATA 57.463 29.630 0.00 0.00 32.87 1.75
2639 2671 9.840427 ATACTTGTCATCAAAACGAATAAAAGG 57.160 29.630 0.00 0.00 32.87 3.11
2640 2672 7.145323 ACTTGTCATCAAAACGAATAAAAGGG 58.855 34.615 0.00 0.00 32.87 3.95
2641 2673 6.019779 TGTCATCAAAACGAATAAAAGGGG 57.980 37.500 0.00 0.00 0.00 4.79
2642 2674 5.770663 TGTCATCAAAACGAATAAAAGGGGA 59.229 36.000 0.00 0.00 0.00 4.81
2643 2675 6.435904 TGTCATCAAAACGAATAAAAGGGGAT 59.564 34.615 0.00 0.00 0.00 3.85
2644 2676 6.751888 GTCATCAAAACGAATAAAAGGGGATG 59.248 38.462 0.00 0.00 0.00 3.51
2645 2677 6.435904 TCATCAAAACGAATAAAAGGGGATGT 59.564 34.615 0.00 0.00 32.47 3.06
2646 2678 7.612244 TCATCAAAACGAATAAAAGGGGATGTA 59.388 33.333 0.00 0.00 32.47 2.29
2647 2679 7.948034 TCAAAACGAATAAAAGGGGATGTAT 57.052 32.000 0.00 0.00 0.00 2.29
2648 2680 7.992008 TCAAAACGAATAAAAGGGGATGTATC 58.008 34.615 0.00 0.00 0.00 2.24
2649 2681 7.832187 TCAAAACGAATAAAAGGGGATGTATCT 59.168 33.333 0.00 0.00 0.00 1.98
2650 2682 9.116067 CAAAACGAATAAAAGGGGATGTATCTA 57.884 33.333 0.00 0.00 0.00 1.98
2651 2683 8.904099 AAACGAATAAAAGGGGATGTATCTAG 57.096 34.615 0.00 0.00 0.00 2.43
2652 2684 7.850935 ACGAATAAAAGGGGATGTATCTAGA 57.149 36.000 0.00 0.00 0.00 2.43
2653 2685 8.437274 ACGAATAAAAGGGGATGTATCTAGAT 57.563 34.615 10.73 10.73 0.00 1.98
2654 2686 8.314751 ACGAATAAAAGGGGATGTATCTAGATG 58.685 37.037 15.79 0.00 0.00 2.90
2655 2687 8.314751 CGAATAAAAGGGGATGTATCTAGATGT 58.685 37.037 15.79 1.25 0.00 3.06
2663 2695 9.845214 AGGGGATGTATCTAGATGTATTTTAGT 57.155 33.333 15.79 0.00 0.00 2.24
2687 2719 8.816894 AGTTCTAGATACATCTCTTTTTGTCCA 58.183 33.333 0.00 0.00 38.32 4.02
2688 2720 9.606631 GTTCTAGATACATCTCTTTTTGTCCAT 57.393 33.333 0.00 0.00 38.32 3.41
2693 2725 9.300681 AGATACATCTCTTTTTGTCCATTTTGA 57.699 29.630 0.00 0.00 29.30 2.69
2695 2727 9.865321 ATACATCTCTTTTTGTCCATTTTGATG 57.135 29.630 0.00 0.00 35.23 3.07
2696 2728 7.954835 ACATCTCTTTTTGTCCATTTTGATGA 58.045 30.769 0.00 0.00 33.85 2.92
2697 2729 7.869429 ACATCTCTTTTTGTCCATTTTGATGAC 59.131 33.333 0.00 0.00 33.85 3.06
2698 2730 7.345422 TCTCTTTTTGTCCATTTTGATGACA 57.655 32.000 0.00 0.00 0.00 3.58
2699 2731 7.780064 TCTCTTTTTGTCCATTTTGATGACAA 58.220 30.769 0.00 0.00 34.47 3.18
2700 2732 7.922278 TCTCTTTTTGTCCATTTTGATGACAAG 59.078 33.333 0.00 0.00 37.13 3.16
2701 2733 7.555087 TCTTTTTGTCCATTTTGATGACAAGT 58.445 30.769 0.00 0.00 37.13 3.16
2702 2734 7.492020 TCTTTTTGTCCATTTTGATGACAAGTG 59.508 33.333 0.00 0.00 37.13 3.16
2703 2735 5.850557 TTGTCCATTTTGATGACAAGTGT 57.149 34.783 0.00 0.00 37.32 3.55
2704 2736 5.850557 TGTCCATTTTGATGACAAGTGTT 57.149 34.783 0.00 0.00 37.32 3.32
2705 2737 6.219417 TGTCCATTTTGATGACAAGTGTTT 57.781 33.333 0.00 0.00 37.32 2.83
2706 2738 6.638610 TGTCCATTTTGATGACAAGTGTTTT 58.361 32.000 0.00 0.00 37.32 2.43
2707 2739 6.756074 TGTCCATTTTGATGACAAGTGTTTTC 59.244 34.615 0.00 0.00 37.32 2.29
2708 2740 5.976534 TCCATTTTGATGACAAGTGTTTTCG 59.023 36.000 0.00 0.00 37.32 3.46
2709 2741 5.175491 CCATTTTGATGACAAGTGTTTTCGG 59.825 40.000 0.00 0.00 37.32 4.30
2710 2742 5.568685 TTTTGATGACAAGTGTTTTCGGA 57.431 34.783 0.00 0.00 37.32 4.55
2711 2743 4.545823 TTGATGACAAGTGTTTTCGGAC 57.454 40.909 0.00 0.00 0.00 4.79
2712 2744 2.542178 TGATGACAAGTGTTTTCGGACG 59.458 45.455 0.00 0.00 0.00 4.79
2713 2745 1.292061 TGACAAGTGTTTTCGGACGG 58.708 50.000 0.00 0.00 0.00 4.79
2714 2746 1.134759 TGACAAGTGTTTTCGGACGGA 60.135 47.619 0.00 0.00 0.00 4.69
2715 2747 1.525619 GACAAGTGTTTTCGGACGGAG 59.474 52.381 0.00 0.00 0.00 4.63
2716 2748 0.865769 CAAGTGTTTTCGGACGGAGG 59.134 55.000 0.00 0.00 0.00 4.30
2717 2749 0.250166 AAGTGTTTTCGGACGGAGGG 60.250 55.000 0.00 0.00 0.00 4.30
2718 2750 1.117142 AGTGTTTTCGGACGGAGGGA 61.117 55.000 0.00 0.00 0.00 4.20
2719 2751 0.669625 GTGTTTTCGGACGGAGGGAG 60.670 60.000 0.00 0.00 0.00 4.30
2720 2752 1.117142 TGTTTTCGGACGGAGGGAGT 61.117 55.000 0.00 0.00 0.00 3.85
2721 2753 0.890683 GTTTTCGGACGGAGGGAGTA 59.109 55.000 0.00 0.00 0.00 2.59
2736 2768 3.449018 AGGGAGTAGTATGCAACTGTCAG 59.551 47.826 10.59 0.00 39.39 3.51
2766 2798 1.503294 TCGTGCGCATCAAGTTGTTA 58.497 45.000 15.91 0.00 0.00 2.41
2796 2828 5.976458 TCTTGCAGTTCTTTTTGTCCAAAT 58.024 33.333 0.00 0.00 0.00 2.32
2882 2914 2.575694 TGGAACAAACACATGCACAC 57.424 45.000 0.00 0.00 31.92 3.82
2883 2915 1.821136 TGGAACAAACACATGCACACA 59.179 42.857 0.00 0.00 31.92 3.72
3016 3049 7.180229 TCACTTAGACTCATATTTGTTCCCTCA 59.820 37.037 0.00 0.00 0.00 3.86
3019 3052 6.380079 AGACTCATATTTGTTCCCTCAACT 57.620 37.500 0.00 0.00 35.79 3.16
3124 3157 3.446442 AATGATGTCCCTTCTGTGCTT 57.554 42.857 0.00 0.00 0.00 3.91
3177 3210 6.587608 GTCTAATCAAAAGTTTCCTTGCATGG 59.412 38.462 12.41 12.41 0.00 3.66
3265 3298 7.759489 TTGGTAGCACTGTAAGAAATTTGAT 57.241 32.000 0.00 0.00 37.43 2.57
3424 3457 7.136822 ACTGAACTCTGTTATATATTGCCCA 57.863 36.000 0.00 0.00 0.00 5.36
3451 3484 0.036010 ACCCTTGAGGATCTTGTGCG 60.036 55.000 0.00 0.00 39.89 5.34
3616 3649 1.967066 ACATCATCCTCGACCTCCATC 59.033 52.381 0.00 0.00 0.00 3.51
3617 3650 2.246469 CATCATCCTCGACCTCCATCT 58.754 52.381 0.00 0.00 0.00 2.90
3618 3651 1.988293 TCATCCTCGACCTCCATCTC 58.012 55.000 0.00 0.00 0.00 2.75
3619 3652 0.965439 CATCCTCGACCTCCATCTCC 59.035 60.000 0.00 0.00 0.00 3.71
3620 3653 0.558220 ATCCTCGACCTCCATCTCCA 59.442 55.000 0.00 0.00 0.00 3.86
3621 3654 0.395862 TCCTCGACCTCCATCTCCAC 60.396 60.000 0.00 0.00 0.00 4.02
3662 3701 3.065786 CAGCAGTCAAGCAGAACTCAAAA 59.934 43.478 0.00 0.00 36.85 2.44
3895 3934 3.430453 CAGCCAATTTGGAAGGAGGTAA 58.570 45.455 19.76 0.00 40.96 2.85
4165 4211 9.512435 CAGACTTGCATTCTTCCATTTAATTAG 57.488 33.333 0.00 0.00 0.00 1.73
4493 4539 9.530633 AACGTATCATTATCAACTTTCTACTCC 57.469 33.333 0.00 0.00 0.00 3.85
4494 4540 8.142551 ACGTATCATTATCAACTTTCTACTCCC 58.857 37.037 0.00 0.00 0.00 4.30
4495 4541 8.361139 CGTATCATTATCAACTTTCTACTCCCT 58.639 37.037 0.00 0.00 0.00 4.20
4496 4542 9.699703 GTATCATTATCAACTTTCTACTCCCTC 57.300 37.037 0.00 0.00 0.00 4.30
4497 4543 7.979786 TCATTATCAACTTTCTACTCCCTCT 57.020 36.000 0.00 0.00 0.00 3.69
4498 4544 7.786030 TCATTATCAACTTTCTACTCCCTCTG 58.214 38.462 0.00 0.00 0.00 3.35
4499 4545 7.400339 TCATTATCAACTTTCTACTCCCTCTGT 59.600 37.037 0.00 0.00 0.00 3.41
4500 4546 5.669164 ATCAACTTTCTACTCCCTCTGTC 57.331 43.478 0.00 0.00 0.00 3.51
4501 4547 3.833070 TCAACTTTCTACTCCCTCTGTCC 59.167 47.826 0.00 0.00 0.00 4.02
4502 4548 2.822697 ACTTTCTACTCCCTCTGTCCC 58.177 52.381 0.00 0.00 0.00 4.46
4503 4549 2.111972 ACTTTCTACTCCCTCTGTCCCA 59.888 50.000 0.00 0.00 0.00 4.37
4504 4550 3.173965 CTTTCTACTCCCTCTGTCCCAA 58.826 50.000 0.00 0.00 0.00 4.12
4505 4551 3.269592 TTCTACTCCCTCTGTCCCAAA 57.730 47.619 0.00 0.00 0.00 3.28
4506 4552 3.269592 TCTACTCCCTCTGTCCCAAAA 57.730 47.619 0.00 0.00 0.00 2.44
4507 4553 3.803340 TCTACTCCCTCTGTCCCAAAAT 58.197 45.455 0.00 0.00 0.00 1.82
4508 4554 4.955335 TCTACTCCCTCTGTCCCAAAATA 58.045 43.478 0.00 0.00 0.00 1.40
4509 4555 5.347124 TCTACTCCCTCTGTCCCAAAATAA 58.653 41.667 0.00 0.00 0.00 1.40
4510 4556 4.576330 ACTCCCTCTGTCCCAAAATAAG 57.424 45.455 0.00 0.00 0.00 1.73
4511 4557 3.916989 ACTCCCTCTGTCCCAAAATAAGT 59.083 43.478 0.00 0.00 0.00 2.24
4512 4558 5.098663 ACTCCCTCTGTCCCAAAATAAGTA 58.901 41.667 0.00 0.00 0.00 2.24
4513 4559 5.731678 ACTCCCTCTGTCCCAAAATAAGTAT 59.268 40.000 0.00 0.00 0.00 2.12
4514 4560 6.217693 ACTCCCTCTGTCCCAAAATAAGTATT 59.782 38.462 0.00 0.00 0.00 1.89
4515 4561 7.039722 TCCCTCTGTCCCAAAATAAGTATTT 57.960 36.000 0.00 0.00 37.49 1.40
4516 4562 7.116736 TCCCTCTGTCCCAAAATAAGTATTTC 58.883 38.462 0.00 0.00 35.00 2.17
4517 4563 6.889722 CCCTCTGTCCCAAAATAAGTATTTCA 59.110 38.462 0.00 0.00 35.00 2.69
4518 4564 7.067494 CCCTCTGTCCCAAAATAAGTATTTCAG 59.933 40.741 0.00 1.37 35.00 3.02
4519 4565 7.391148 TCTGTCCCAAAATAAGTATTTCAGC 57.609 36.000 0.00 0.00 35.00 4.26
4520 4566 6.377146 TCTGTCCCAAAATAAGTATTTCAGCC 59.623 38.462 0.00 0.00 35.00 4.85
4521 4567 6.252995 TGTCCCAAAATAAGTATTTCAGCCT 58.747 36.000 0.00 0.00 35.00 4.58
4522 4568 6.723977 TGTCCCAAAATAAGTATTTCAGCCTT 59.276 34.615 0.00 0.00 35.00 4.35
4523 4569 7.891183 TGTCCCAAAATAAGTATTTCAGCCTTA 59.109 33.333 0.00 0.00 35.00 2.69
4524 4570 8.406297 GTCCCAAAATAAGTATTTCAGCCTTAG 58.594 37.037 0.00 0.00 35.00 2.18
4525 4571 8.113462 TCCCAAAATAAGTATTTCAGCCTTAGT 58.887 33.333 0.00 0.00 35.00 2.24
4526 4572 9.403583 CCCAAAATAAGTATTTCAGCCTTAGTA 57.596 33.333 0.00 0.00 35.00 1.82
4533 4579 8.919777 AAGTATTTCAGCCTTAGTACAACTTT 57.080 30.769 0.00 0.00 0.00 2.66
4534 4580 8.324163 AGTATTTCAGCCTTAGTACAACTTTG 57.676 34.615 0.00 0.00 0.00 2.77
4535 4581 7.937394 AGTATTTCAGCCTTAGTACAACTTTGT 59.063 33.333 0.00 0.00 44.86 2.83
4536 4582 9.211485 GTATTTCAGCCTTAGTACAACTTTGTA 57.789 33.333 0.00 0.00 42.35 2.41
4561 4607 7.553334 ACTGAAGTTAGTACAAAGTTGAGACA 58.447 34.615 0.00 0.00 30.41 3.41
4562 4608 7.491696 ACTGAAGTTAGTACAAAGTTGAGACAC 59.508 37.037 0.00 0.00 30.41 3.67
4563 4609 7.553334 TGAAGTTAGTACAAAGTTGAGACACT 58.447 34.615 0.00 0.00 0.00 3.55
4564 4610 8.038944 TGAAGTTAGTACAAAGTTGAGACACTT 58.961 33.333 0.00 3.16 38.74 3.16
4565 4611 9.525409 GAAGTTAGTACAAAGTTGAGACACTTA 57.475 33.333 0.00 0.00 35.87 2.24
4571 4617 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
4572 4618 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
4573 4619 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
4574 4620 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
4575 4621 5.690865 AGTTGAGACACTTATTTTGGGACA 58.309 37.500 0.00 0.00 0.00 4.02
4576 4622 5.765182 AGTTGAGACACTTATTTTGGGACAG 59.235 40.000 0.00 0.00 42.39 3.51
4577 4623 5.560722 TGAGACACTTATTTTGGGACAGA 57.439 39.130 0.00 0.00 42.39 3.41
4578 4624 5.551233 TGAGACACTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
4579 4625 4.911390 AGACACTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
4580 4626 4.010349 GACACTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
4581 4627 3.655777 ACACTTATTTTGGGACAGAGGGA 59.344 43.478 0.00 0.00 42.39 4.20
4866 4939 8.420374 TTCTTTCAGCGGTTTATTAGATAGTG 57.580 34.615 0.00 0.00 0.00 2.74
4900 4974 5.464965 AGCGAAGGTATCAAATTTGTACG 57.535 39.130 17.47 13.31 35.08 3.67
4945 5019 4.722194 ACGTCATGCATTTGTCATTGTAC 58.278 39.130 0.00 0.00 0.00 2.90
5023 5097 4.339872 AGATGAGCTCATGGACATTCTC 57.660 45.455 33.33 16.23 36.57 2.87
5310 5384 8.545472 TGCAGAGTAATTAATTACACCTACCTT 58.455 33.333 30.54 14.13 43.83 3.50
5311 5385 8.827677 GCAGAGTAATTAATTACACCTACCTTG 58.172 37.037 30.54 20.60 43.83 3.61
5312 5386 9.886132 CAGAGTAATTAATTACACCTACCTTGT 57.114 33.333 30.54 12.96 43.83 3.16
5318 5392 5.688814 AATTACACCTACCTTGTACTCCC 57.311 43.478 0.00 0.00 0.00 4.30
5319 5393 4.408904 TTACACCTACCTTGTACTCCCT 57.591 45.455 0.00 0.00 0.00 4.20
5320 5394 2.817665 ACACCTACCTTGTACTCCCTC 58.182 52.381 0.00 0.00 0.00 4.30
5321 5395 2.382649 ACACCTACCTTGTACTCCCTCT 59.617 50.000 0.00 0.00 0.00 3.69
5322 5396 2.761208 CACCTACCTTGTACTCCCTCTG 59.239 54.545 0.00 0.00 0.00 3.35
5323 5397 2.382649 ACCTACCTTGTACTCCCTCTGT 59.617 50.000 0.00 0.00 0.00 3.41
5324 5398 3.025262 CCTACCTTGTACTCCCTCTGTC 58.975 54.545 0.00 0.00 0.00 3.51
5325 5399 1.939980 ACCTTGTACTCCCTCTGTCC 58.060 55.000 0.00 0.00 0.00 4.02
5326 5400 0.818296 CCTTGTACTCCCTCTGTCCG 59.182 60.000 0.00 0.00 0.00 4.79
5327 5401 1.616187 CCTTGTACTCCCTCTGTCCGA 60.616 57.143 0.00 0.00 0.00 4.55
5328 5402 2.168496 CTTGTACTCCCTCTGTCCGAA 58.832 52.381 0.00 0.00 0.00 4.30
5329 5403 2.297698 TGTACTCCCTCTGTCCGAAA 57.702 50.000 0.00 0.00 0.00 3.46
5330 5404 2.600790 TGTACTCCCTCTGTCCGAAAA 58.399 47.619 0.00 0.00 0.00 2.29
5331 5405 2.967201 TGTACTCCCTCTGTCCGAAAAA 59.033 45.455 0.00 0.00 0.00 1.94
5332 5406 2.841442 ACTCCCTCTGTCCGAAAAAG 57.159 50.000 0.00 0.00 0.00 2.27
5333 5407 1.270893 ACTCCCTCTGTCCGAAAAAGC 60.271 52.381 0.00 0.00 0.00 3.51
5334 5408 1.002544 CTCCCTCTGTCCGAAAAAGCT 59.997 52.381 0.00 0.00 0.00 3.74
5335 5409 1.420138 TCCCTCTGTCCGAAAAAGCTT 59.580 47.619 0.00 0.00 0.00 3.74
5336 5410 1.537202 CCCTCTGTCCGAAAAAGCTTG 59.463 52.381 0.00 0.00 0.00 4.01
5337 5411 2.222027 CCTCTGTCCGAAAAAGCTTGT 58.778 47.619 0.00 0.00 0.00 3.16
5338 5412 2.224314 CCTCTGTCCGAAAAAGCTTGTC 59.776 50.000 0.00 0.00 0.00 3.18
5339 5413 2.218603 TCTGTCCGAAAAAGCTTGTCC 58.781 47.619 0.00 0.00 0.00 4.02
5340 5414 1.266989 CTGTCCGAAAAAGCTTGTCCC 59.733 52.381 0.00 0.00 0.00 4.46
5341 5415 1.314730 GTCCGAAAAAGCTTGTCCCA 58.685 50.000 0.00 0.00 0.00 4.37
5342 5416 1.679153 GTCCGAAAAAGCTTGTCCCAA 59.321 47.619 0.00 0.00 0.00 4.12
5343 5417 1.953686 TCCGAAAAAGCTTGTCCCAAG 59.046 47.619 0.00 0.00 0.00 3.61
5344 5418 1.602920 CCGAAAAAGCTTGTCCCAAGC 60.603 52.381 18.69 18.69 43.31 4.01
5350 5424 1.959848 GCTTGTCCCAAGCTTGTCC 59.040 57.895 24.35 12.15 40.01 4.02
5351 5425 1.527433 GCTTGTCCCAAGCTTGTCCC 61.527 60.000 24.35 11.81 40.01 4.46
5352 5426 0.111253 CTTGTCCCAAGCTTGTCCCT 59.889 55.000 24.35 0.00 0.00 4.20
5353 5427 0.110486 TTGTCCCAAGCTTGTCCCTC 59.890 55.000 24.35 10.65 0.00 4.30
5354 5428 1.059584 TGTCCCAAGCTTGTCCCTCA 61.060 55.000 24.35 12.85 0.00 3.86
5355 5429 0.110486 GTCCCAAGCTTGTCCCTCAA 59.890 55.000 24.35 0.00 34.61 3.02
5356 5430 0.850100 TCCCAAGCTTGTCCCTCAAA 59.150 50.000 24.35 0.00 35.48 2.69
5357 5431 1.428912 TCCCAAGCTTGTCCCTCAAAT 59.571 47.619 24.35 0.00 35.48 2.32
5358 5432 1.547372 CCCAAGCTTGTCCCTCAAATG 59.453 52.381 24.35 5.47 35.48 2.32
5359 5433 1.547372 CCAAGCTTGTCCCTCAAATGG 59.453 52.381 24.35 1.81 35.48 3.16
5360 5434 2.517959 CAAGCTTGTCCCTCAAATGGA 58.482 47.619 18.65 0.00 35.48 3.41
5361 5435 3.094572 CAAGCTTGTCCCTCAAATGGAT 58.905 45.455 18.65 0.00 35.48 3.41
5362 5436 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
5363 5437 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
5364 5438 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
5365 5439 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
5366 5440 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
5367 5441 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
5368 5442 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
5369 5443 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
5370 5444 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
5371 5445 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
5372 5446 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
5373 5447 5.221803 CCCTCAAATGGATGTATCTAGCACT 60.222 44.000 0.00 0.00 0.00 4.40
5374 5448 6.014242 CCCTCAAATGGATGTATCTAGCACTA 60.014 42.308 0.00 0.00 0.00 2.74
5375 5449 7.445121 CCTCAAATGGATGTATCTAGCACTAA 58.555 38.462 0.00 0.00 0.00 2.24
5376 5450 7.386299 CCTCAAATGGATGTATCTAGCACTAAC 59.614 40.741 0.00 0.00 0.00 2.34
5377 5451 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
5378 5452 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
5379 5453 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
5380 5454 7.603180 ATGGATGTATCTAGCACTAACTTGA 57.397 36.000 0.00 0.00 0.00 3.02
5381 5455 7.603180 TGGATGTATCTAGCACTAACTTGAT 57.397 36.000 0.00 0.00 36.37 2.57
5382 5456 7.436933 TGGATGTATCTAGCACTAACTTGATG 58.563 38.462 0.00 0.00 34.60 3.07
5383 5457 6.367422 GGATGTATCTAGCACTAACTTGATGC 59.633 42.308 0.00 0.00 39.74 3.91
5393 5467 7.344910 GCACTAACTTGATGCTAGATACATC 57.655 40.000 0.00 0.00 43.46 3.06
5394 5468 6.367422 GCACTAACTTGATGCTAGATACATCC 59.633 42.308 0.00 0.00 42.68 3.51
5395 5469 7.436933 CACTAACTTGATGCTAGATACATCCA 58.563 38.462 0.00 0.00 42.68 3.41
5396 5470 8.093307 CACTAACTTGATGCTAGATACATCCAT 58.907 37.037 0.00 0.00 42.68 3.41
5397 5471 8.654997 ACTAACTTGATGCTAGATACATCCATT 58.345 33.333 0.00 0.00 42.68 3.16
5398 5472 9.499479 CTAACTTGATGCTAGATACATCCATTT 57.501 33.333 0.00 0.00 42.68 2.32
5399 5473 7.741027 ACTTGATGCTAGATACATCCATTTG 57.259 36.000 0.00 0.00 42.68 2.32
5400 5474 7.512130 ACTTGATGCTAGATACATCCATTTGA 58.488 34.615 0.00 0.00 42.68 2.69
5401 5475 7.660617 ACTTGATGCTAGATACATCCATTTGAG 59.339 37.037 0.00 0.00 42.68 3.02
5402 5476 6.470278 TGATGCTAGATACATCCATTTGAGG 58.530 40.000 0.00 0.00 42.68 3.86
5403 5477 5.233083 TGCTAGATACATCCATTTGAGGG 57.767 43.478 0.00 0.00 0.00 4.30
5404 5478 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
5405 5479 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
5406 5480 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
5407 5481 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
5408 5482 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
5409 5483 3.814504 ACATCCATTTGAGGGACAAGT 57.185 42.857 0.00 0.00 39.77 3.16
5410 5484 4.118168 ACATCCATTTGAGGGACAAGTT 57.882 40.909 0.00 0.00 39.77 2.66
5411 5485 4.482990 ACATCCATTTGAGGGACAAGTTT 58.517 39.130 0.00 0.00 39.77 2.66
5412 5486 4.901250 ACATCCATTTGAGGGACAAGTTTT 59.099 37.500 0.00 0.00 39.77 2.43
5413 5487 5.366477 ACATCCATTTGAGGGACAAGTTTTT 59.634 36.000 0.00 0.00 39.77 1.94
5680 5754 2.497138 CACAAGAATGGTCAGTGCTCA 58.503 47.619 0.00 0.00 0.00 4.26
5689 5763 2.171659 TGGTCAGTGCTCAGTAACCAAA 59.828 45.455 0.00 0.00 34.02 3.28
5729 5803 9.635520 CTTTATGATCTTTTCAAGAAAGCATGT 57.364 29.630 0.00 0.00 41.63 3.21
5768 5842 6.126863 ACCTGATCATTTTGAGGACACTTA 57.873 37.500 0.00 0.00 0.00 2.24
5779 5853 6.373005 TTGAGGACACTTAAATGATCTGGA 57.627 37.500 0.00 0.00 0.00 3.86
5780 5854 6.566079 TGAGGACACTTAAATGATCTGGAT 57.434 37.500 0.00 0.00 0.00 3.41
5781 5855 6.351711 TGAGGACACTTAAATGATCTGGATG 58.648 40.000 0.00 0.00 0.00 3.51
5782 5856 5.128919 AGGACACTTAAATGATCTGGATGC 58.871 41.667 0.00 0.00 0.00 3.91
5783 5857 4.883585 GGACACTTAAATGATCTGGATGCA 59.116 41.667 0.00 0.00 0.00 3.96
5784 5858 5.533903 GGACACTTAAATGATCTGGATGCAT 59.466 40.000 0.00 0.00 0.00 3.96
5785 5859 6.040166 GGACACTTAAATGATCTGGATGCATT 59.960 38.462 0.00 0.00 33.96 3.56
5896 5993 6.755141 ACTCGTACATGTAACATGTGGTAATC 59.245 38.462 7.25 0.00 33.76 1.75
5912 6009 4.354387 TGGTAATCCTGAAGTTTTGGGGTA 59.646 41.667 0.00 0.00 34.23 3.69
5974 6071 3.135895 CCCGTTAATCTACCCATGTCCTT 59.864 47.826 0.00 0.00 0.00 3.36
6037 6134 9.625747 TTTATCCAGTTTGAATGATATACTGCA 57.374 29.630 0.00 0.00 35.93 4.41
6038 6135 6.925610 TCCAGTTTGAATGATATACTGCAC 57.074 37.500 0.00 0.00 35.93 4.57
6039 6136 6.413892 TCCAGTTTGAATGATATACTGCACA 58.586 36.000 0.00 0.00 35.93 4.57
6040 6137 6.539826 TCCAGTTTGAATGATATACTGCACAG 59.460 38.462 0.00 0.00 35.93 3.66
6041 6138 6.317140 CCAGTTTGAATGATATACTGCACAGT 59.683 38.462 8.57 8.57 45.02 3.55
6085 6182 6.798315 TTGATTTGTTGGCCATTTAACATG 57.202 33.333 6.09 0.00 36.75 3.21
6094 6191 4.402155 TGGCCATTTAACATGTCCTCATTC 59.598 41.667 0.00 0.00 31.15 2.67
6095 6192 4.202151 GGCCATTTAACATGTCCTCATTCC 60.202 45.833 0.00 0.00 31.15 3.01
6497 6594 5.794894 TCCATTCTCTTTTCTGGTACACTC 58.205 41.667 0.00 0.00 0.00 3.51
6569 6666 2.520020 TGCCCATGCTGCTATGGC 60.520 61.111 19.33 17.91 45.07 4.40
6784 6881 9.740710 AGAGCCTTAAATATTTACAAAGTCACT 57.259 29.630 7.43 2.89 0.00 3.41
6799 6896 3.424703 AGTCACTAAGCATGTGCCAAAT 58.575 40.909 0.57 0.00 43.38 2.32
6919 7016 1.016627 CCGCACATCCATGTTTCGAT 58.983 50.000 10.90 0.00 39.39 3.59
6922 7019 2.286008 CGCACATCCATGTTTCGATCAG 60.286 50.000 5.58 0.00 39.39 2.90
7012 7109 7.203255 ACAGACAAATTAGTAAAGCTTGTCC 57.797 36.000 20.94 11.09 44.42 4.02
7024 7121 1.845809 GCTTGTCCAGAGCAACACGG 61.846 60.000 0.00 0.00 39.89 4.94
7027 7124 0.753867 TGTCCAGAGCAACACGGTAA 59.246 50.000 0.00 0.00 0.00 2.85
7128 7225 5.368256 CACTTGATAGTGCAGCTTCTTTT 57.632 39.130 0.00 0.00 44.81 2.27
7165 7262 7.637519 CACATCGTAGTCTTAATTTGATTGCTG 59.362 37.037 0.00 0.00 0.00 4.41
7206 7303 0.616964 ACTGAGAGCTGCATCTCCCA 60.617 55.000 13.81 7.75 44.30 4.37
7294 7391 3.568430 TCCGAGTATATGAAGCGTCACAT 59.432 43.478 3.91 0.68 36.31 3.21
7392 7489 2.290916 ACTATGTGATGCTCGACTACGG 59.709 50.000 0.00 0.00 40.21 4.02
7393 7490 0.385751 ATGTGATGCTCGACTACGGG 59.614 55.000 0.00 0.00 43.59 5.28
7606 7703 5.916661 TCTCCACTTATGTAGTTCTGTCC 57.083 43.478 0.00 0.00 33.85 4.02
7611 7708 9.078990 CTCCACTTATGTAGTTCTGTCCATATA 57.921 37.037 0.00 0.00 33.85 0.86
7612 7709 9.429109 TCCACTTATGTAGTTCTGTCCATATAA 57.571 33.333 0.00 0.00 33.85 0.98
7618 7715 8.792830 ATGTAGTTCTGTCCATATAACCCTTA 57.207 34.615 0.00 0.00 0.00 2.69
7717 7814 3.311871 GTCCTGATCTTACAATGCTGCTG 59.688 47.826 0.00 0.00 0.00 4.41
7802 7899 3.657398 ATGATCTGTCCAGGAATGCAA 57.343 42.857 0.00 0.00 0.00 4.08
7803 7900 3.657398 TGATCTGTCCAGGAATGCAAT 57.343 42.857 0.00 0.00 0.00 3.56
7824 7921 6.458888 GCAATTAGATGCCCACTCTTTCTTAC 60.459 42.308 0.00 0.00 40.49 2.34
7826 7923 3.185455 AGATGCCCACTCTTTCTTACCT 58.815 45.455 0.00 0.00 0.00 3.08
7863 7960 8.973835 TTTTTGGTTGCGAATTACCTAATTAG 57.026 30.769 5.43 5.43 36.13 1.73
7924 8052 0.885196 CTAGTAGATGCCTCTCCCGC 59.115 60.000 0.00 0.00 32.66 6.13
7976 8104 1.003839 CTGGGTGCGTACATGGTGT 60.004 57.895 5.86 0.00 0.00 4.16
8026 8154 3.328931 GCAATGATCTCTTATCCTGGGGA 59.671 47.826 0.00 0.00 35.55 4.81
8174 8302 4.530857 GGTCGATGGTGCCCTCCG 62.531 72.222 0.00 0.00 0.00 4.63
8206 8334 0.944311 TGCCGCTGAACTTCTCGAAC 60.944 55.000 0.00 0.62 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.074727 TGTGGGGGTGTATTTGGAGTG 59.925 52.381 0.00 0.00 0.00 3.51
8 9 1.451449 TGTGGGGGTGTATTTGGAGT 58.549 50.000 0.00 0.00 0.00 3.85
29 30 8.981659 TCATCCTTGAAACTCTATATCTGACAA 58.018 33.333 0.00 0.00 0.00 3.18
30 31 8.539117 TCATCCTTGAAACTCTATATCTGACA 57.461 34.615 0.00 0.00 0.00 3.58
129 147 8.434661 GCAATGTCGTCATATGTTTTTCAAAAT 58.565 29.630 1.90 0.00 33.49 1.82
148 166 9.869844 CAGTATAATAGCAACTTTAGCAATGTC 57.130 33.333 0.00 0.00 0.00 3.06
152 170 8.506168 AAGCAGTATAATAGCAACTTTAGCAA 57.494 30.769 0.00 0.00 0.00 3.91
160 178 9.869844 CATTCACTTAAGCAGTATAATAGCAAC 57.130 33.333 1.29 0.00 32.76 4.17
166 184 6.288294 TCGGCATTCACTTAAGCAGTATAAT 58.712 36.000 1.29 0.00 32.76 1.28
171 189 2.472695 TCGGCATTCACTTAAGCAGT 57.527 45.000 1.29 0.00 35.35 4.40
173 191 3.407698 TCTTTCGGCATTCACTTAAGCA 58.592 40.909 1.29 0.00 0.00 3.91
174 192 4.622701 ATCTTTCGGCATTCACTTAAGC 57.377 40.909 1.29 0.00 0.00 3.09
175 193 5.277538 GGCTATCTTTCGGCATTCACTTAAG 60.278 44.000 0.00 0.00 0.00 1.85
186 204 1.152383 GACCGTGGCTATCTTTCGGC 61.152 60.000 0.00 0.00 44.17 5.54
187 205 0.460311 AGACCGTGGCTATCTTTCGG 59.540 55.000 0.00 0.00 45.53 4.30
205 225 2.422832 GACTAGTCCCGGTCTACACAAG 59.577 54.545 12.13 0.00 0.00 3.16
222 242 1.635817 GCTTCCCATGGCCAGGACTA 61.636 60.000 21.32 1.89 0.00 2.59
223 243 2.988839 GCTTCCCATGGCCAGGACT 61.989 63.158 21.32 0.00 0.00 3.85
224 244 2.440980 GCTTCCCATGGCCAGGAC 60.441 66.667 21.32 2.25 0.00 3.85
225 245 3.743017 GGCTTCCCATGGCCAGGA 61.743 66.667 21.32 15.01 46.84 3.86
235 255 3.879180 TTTTCGGGCTGGGCTTCCC 62.879 63.158 0.00 0.00 45.71 3.97
236 256 1.682344 ATTTTCGGGCTGGGCTTCC 60.682 57.895 0.00 0.00 0.00 3.46
237 257 1.512694 CATTTTCGGGCTGGGCTTC 59.487 57.895 0.00 0.00 0.00 3.86
238 258 2.649129 GCATTTTCGGGCTGGGCTT 61.649 57.895 0.00 0.00 0.00 4.35
239 259 3.070576 GCATTTTCGGGCTGGGCT 61.071 61.111 0.00 0.00 0.00 5.19
240 260 2.649129 AAGCATTTTCGGGCTGGGC 61.649 57.895 0.00 0.00 40.93 5.36
241 261 1.216178 CAAGCATTTTCGGGCTGGG 59.784 57.895 0.00 0.00 40.93 4.45
242 262 0.109132 GTCAAGCATTTTCGGGCTGG 60.109 55.000 0.00 0.00 40.93 4.85
243 263 0.109132 GGTCAAGCATTTTCGGGCTG 60.109 55.000 0.00 0.00 40.93 4.85
244 264 1.250840 GGGTCAAGCATTTTCGGGCT 61.251 55.000 0.00 0.00 43.46 5.19
245 265 1.215382 GGGTCAAGCATTTTCGGGC 59.785 57.895 0.00 0.00 0.00 6.13
246 266 1.506262 CGGGTCAAGCATTTTCGGG 59.494 57.895 0.00 0.00 0.00 5.14
247 267 1.506262 CCGGGTCAAGCATTTTCGG 59.494 57.895 0.00 0.00 0.00 4.30
248 268 1.154035 GCCGGGTCAAGCATTTTCG 60.154 57.895 2.18 0.00 0.00 3.46
249 269 1.215382 GGCCGGGTCAAGCATTTTC 59.785 57.895 2.18 0.00 0.00 2.29
250 270 2.282783 GGGCCGGGTCAAGCATTTT 61.283 57.895 2.18 0.00 0.00 1.82
251 271 2.679996 GGGCCGGGTCAAGCATTT 60.680 61.111 2.18 0.00 0.00 2.32
288 308 1.587547 CTCAAAATCTAGGCCCGAGC 58.412 55.000 0.00 0.00 38.76 5.03
289 309 1.139853 AGCTCAAAATCTAGGCCCGAG 59.860 52.381 0.00 0.00 0.00 4.63
290 310 1.139058 GAGCTCAAAATCTAGGCCCGA 59.861 52.381 9.40 0.00 0.00 5.14
291 311 1.587547 GAGCTCAAAATCTAGGCCCG 58.412 55.000 9.40 0.00 0.00 6.13
292 312 1.139058 TCGAGCTCAAAATCTAGGCCC 59.861 52.381 15.40 0.00 0.00 5.80
293 313 2.205911 GTCGAGCTCAAAATCTAGGCC 58.794 52.381 15.40 0.00 0.00 5.19
294 314 1.855360 CGTCGAGCTCAAAATCTAGGC 59.145 52.381 15.40 0.00 0.00 3.93
295 315 2.464865 CCGTCGAGCTCAAAATCTAGG 58.535 52.381 15.40 1.32 0.00 3.02
296 316 1.855360 GCCGTCGAGCTCAAAATCTAG 59.145 52.381 15.40 0.00 0.00 2.43
297 317 1.470979 GGCCGTCGAGCTCAAAATCTA 60.471 52.381 15.40 0.00 0.00 1.98
298 318 0.741221 GGCCGTCGAGCTCAAAATCT 60.741 55.000 15.40 0.00 0.00 2.40
299 319 1.716172 GGCCGTCGAGCTCAAAATC 59.284 57.895 15.40 0.00 0.00 2.17
300 320 2.100631 CGGCCGTCGAGCTCAAAAT 61.101 57.895 19.50 0.00 42.43 1.82
301 321 2.736995 CGGCCGTCGAGCTCAAAA 60.737 61.111 19.50 0.00 42.43 2.44
302 322 4.735132 CCGGCCGTCGAGCTCAAA 62.735 66.667 26.12 0.00 42.43 2.69
320 340 0.594796 CAAAAATGATAGGCGCGGGC 60.595 55.000 17.31 17.31 38.90 6.13
321 341 0.594796 GCAAAAATGATAGGCGCGGG 60.595 55.000 8.83 0.00 0.00 6.13
322 342 0.100325 TGCAAAAATGATAGGCGCGG 59.900 50.000 8.83 0.00 0.00 6.46
323 343 2.124011 ATGCAAAAATGATAGGCGCG 57.876 45.000 0.00 0.00 0.00 6.86
324 344 4.863152 AAAATGCAAAAATGATAGGCGC 57.137 36.364 0.00 0.00 0.00 6.53
343 363 2.920384 GGCCGGCCCCTTCAAAAA 60.920 61.111 36.64 0.00 0.00 1.94
366 386 2.359478 ACGTAAAAGCCTGCCGGG 60.359 61.111 2.18 0.00 38.36 5.73
367 387 1.512156 AACACGTAAAAGCCTGCCGG 61.512 55.000 0.00 0.00 0.00 6.13
368 388 0.309612 AAACACGTAAAAGCCTGCCG 59.690 50.000 0.00 0.00 0.00 5.69
369 389 1.601914 CCAAACACGTAAAAGCCTGCC 60.602 52.381 0.00 0.00 0.00 4.85
370 390 1.601914 CCCAAACACGTAAAAGCCTGC 60.602 52.381 0.00 0.00 0.00 4.85
371 391 1.601914 GCCCAAACACGTAAAAGCCTG 60.602 52.381 0.00 0.00 0.00 4.85
372 392 0.671796 GCCCAAACACGTAAAAGCCT 59.328 50.000 0.00 0.00 0.00 4.58
373 393 0.319211 GGCCCAAACACGTAAAAGCC 60.319 55.000 0.00 0.00 0.00 4.35
374 394 0.662077 CGGCCCAAACACGTAAAAGC 60.662 55.000 0.00 0.00 0.00 3.51
375 395 0.039888 CCGGCCCAAACACGTAAAAG 60.040 55.000 0.00 0.00 0.00 2.27
376 396 0.465097 TCCGGCCCAAACACGTAAAA 60.465 50.000 0.00 0.00 0.00 1.52
377 397 1.147824 TCCGGCCCAAACACGTAAA 59.852 52.632 0.00 0.00 0.00 2.01
378 398 1.597578 GTCCGGCCCAAACACGTAA 60.598 57.895 0.00 0.00 0.00 3.18
379 399 2.030862 GTCCGGCCCAAACACGTA 59.969 61.111 0.00 0.00 0.00 3.57
380 400 3.409605 AAGTCCGGCCCAAACACGT 62.410 57.895 0.00 0.00 0.00 4.49
381 401 2.593436 AAGTCCGGCCCAAACACG 60.593 61.111 0.00 0.00 0.00 4.49
382 402 2.561037 CCAAGTCCGGCCCAAACAC 61.561 63.158 0.00 0.00 0.00 3.32
383 403 2.203422 CCAAGTCCGGCCCAAACA 60.203 61.111 0.00 0.00 0.00 2.83
384 404 2.203437 ACCAAGTCCGGCCCAAAC 60.203 61.111 0.00 0.00 0.00 2.93
385 405 2.114411 GACCAAGTCCGGCCCAAA 59.886 61.111 0.00 0.00 0.00 3.28
386 406 3.961414 GGACCAAGTCCGGCCCAA 61.961 66.667 0.00 0.00 43.14 4.12
417 437 3.131478 GGTTTGACCCGGCCATCG 61.131 66.667 2.24 0.00 38.88 3.84
426 446 2.989253 CAAGGCCCGGGTTTGACC 60.989 66.667 26.48 17.87 37.60 4.02
427 447 2.989253 CCAAGGCCCGGGTTTGAC 60.989 66.667 30.04 12.96 0.00 3.18
428 448 3.076217 AACCAAGGCCCGGGTTTGA 62.076 57.895 30.04 0.00 44.78 2.69
429 449 2.523168 AACCAAGGCCCGGGTTTG 60.523 61.111 24.63 24.67 44.78 2.93
432 452 2.284151 AAAAACCAAGGCCCGGGT 59.716 55.556 24.63 10.09 39.65 5.28
474 494 1.921869 ATACCTGGCCAAACCTCGGG 61.922 60.000 7.01 4.92 40.22 5.14
475 495 0.834612 TATACCTGGCCAAACCTCGG 59.165 55.000 7.01 5.79 40.22 4.63
476 496 2.368875 AGATATACCTGGCCAAACCTCG 59.631 50.000 7.01 0.00 40.22 4.63
477 497 3.496870 CCAGATATACCTGGCCAAACCTC 60.497 52.174 7.01 0.00 46.16 3.85
478 498 2.443255 CCAGATATACCTGGCCAAACCT 59.557 50.000 7.01 0.00 46.16 3.50
479 499 2.863809 CCAGATATACCTGGCCAAACC 58.136 52.381 7.01 0.00 46.16 3.27
487 507 3.520696 TGATGGGTCCCAGATATACCTG 58.479 50.000 17.70 0.00 36.75 4.00
488 508 3.943269 TGATGGGTCCCAGATATACCT 57.057 47.619 17.70 0.00 36.75 3.08
489 509 3.370953 GCATGATGGGTCCCAGATATACC 60.371 52.174 17.70 0.00 36.75 2.73
490 510 3.521126 AGCATGATGGGTCCCAGATATAC 59.479 47.826 17.70 5.46 36.75 1.47
491 511 3.520721 CAGCATGATGGGTCCCAGATATA 59.479 47.826 17.70 0.82 39.69 0.86
492 512 2.307980 CAGCATGATGGGTCCCAGATAT 59.692 50.000 17.70 7.58 39.69 1.63
493 513 1.701292 CAGCATGATGGGTCCCAGATA 59.299 52.381 17.70 5.36 39.69 1.98
494 514 0.477204 CAGCATGATGGGTCCCAGAT 59.523 55.000 17.70 8.06 39.69 2.90
495 515 0.915872 ACAGCATGATGGGTCCCAGA 60.916 55.000 17.70 5.77 39.69 3.86
496 516 0.033796 AACAGCATGATGGGTCCCAG 60.034 55.000 17.70 3.42 39.69 4.45
497 517 0.409092 AAACAGCATGATGGGTCCCA 59.591 50.000 14.64 14.64 39.69 4.37
498 518 1.478105 GAAAACAGCATGATGGGTCCC 59.522 52.381 16.55 0.00 39.69 4.46
499 519 2.170166 TGAAAACAGCATGATGGGTCC 58.830 47.619 16.55 2.52 39.69 4.46
500 520 4.460948 AATGAAAACAGCATGATGGGTC 57.539 40.909 16.55 9.58 39.69 4.46
501 521 4.529377 AGAAATGAAAACAGCATGATGGGT 59.471 37.500 16.55 0.00 39.69 4.51
502 522 5.080969 AGAAATGAAAACAGCATGATGGG 57.919 39.130 16.55 0.00 39.69 4.00
503 523 5.107133 GGAGAAATGAAAACAGCATGATGG 58.893 41.667 16.55 0.00 39.69 3.51
504 524 5.575606 GTGGAGAAATGAAAACAGCATGATG 59.424 40.000 9.94 9.94 39.69 3.07
505 525 5.337009 GGTGGAGAAATGAAAACAGCATGAT 60.337 40.000 0.00 0.00 39.69 2.45
506 526 4.022068 GGTGGAGAAATGAAAACAGCATGA 60.022 41.667 0.00 0.00 39.69 3.07
509 529 2.627699 GGGTGGAGAAATGAAAACAGCA 59.372 45.455 0.00 0.00 0.00 4.41
519 539 2.578480 GGAAGGAGAAGGGTGGAGAAAT 59.422 50.000 0.00 0.00 0.00 2.17
654 674 2.408565 GGGGAGAGAGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
655 675 1.421646 GGGGGAGAGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
656 676 1.010793 AGGGGGAGAGAGAGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
657 677 1.522900 AGGGGGAGAGAGAGAGAGAG 58.477 60.000 0.00 0.00 0.00 3.20
658 678 1.850345 GAAGGGGGAGAGAGAGAGAGA 59.150 57.143 0.00 0.00 0.00 3.10
659 679 1.568597 TGAAGGGGGAGAGAGAGAGAG 59.431 57.143 0.00 0.00 0.00 3.20
660 680 1.687492 TGAAGGGGGAGAGAGAGAGA 58.313 55.000 0.00 0.00 0.00 3.10
661 681 2.597455 GATGAAGGGGGAGAGAGAGAG 58.403 57.143 0.00 0.00 0.00 3.20
662 682 1.219213 GGATGAAGGGGGAGAGAGAGA 59.781 57.143 0.00 0.00 0.00 3.10
663 683 1.220236 AGGATGAAGGGGGAGAGAGAG 59.780 57.143 0.00 0.00 0.00 3.20
664 684 1.324014 AGGATGAAGGGGGAGAGAGA 58.676 55.000 0.00 0.00 0.00 3.10
665 685 2.046292 GAAGGATGAAGGGGGAGAGAG 58.954 57.143 0.00 0.00 0.00 3.20
666 686 1.344496 GGAAGGATGAAGGGGGAGAGA 60.344 57.143 0.00 0.00 0.00 3.10
667 687 1.135960 GGAAGGATGAAGGGGGAGAG 58.864 60.000 0.00 0.00 0.00 3.20
668 688 0.725133 AGGAAGGATGAAGGGGGAGA 59.275 55.000 0.00 0.00 0.00 3.71
669 689 1.135960 GAGGAAGGATGAAGGGGGAG 58.864 60.000 0.00 0.00 0.00 4.30
670 690 0.725133 AGAGGAAGGATGAAGGGGGA 59.275 55.000 0.00 0.00 0.00 4.81
671 691 1.492599 GAAGAGGAAGGATGAAGGGGG 59.507 57.143 0.00 0.00 0.00 5.40
698 718 1.743252 CCGGAGGCTTCTGTGCTTC 60.743 63.158 0.00 0.00 46.14 3.86
1334 1366 3.689347 TGACCCCAGATCTGAATGTTTG 58.311 45.455 24.62 5.13 0.00 2.93
1450 1482 1.769733 CACAAAAACATGCCCACTCG 58.230 50.000 0.00 0.00 0.00 4.18
1478 1510 1.606224 GCCATTGCACAAAGGGAAGTG 60.606 52.381 6.76 0.00 42.62 3.16
1565 1597 0.236449 CACGGTAACCAAAGAACGGC 59.764 55.000 0.00 0.00 0.00 5.68
1567 1599 0.938713 TGCACGGTAACCAAAGAACG 59.061 50.000 0.00 0.00 0.00 3.95
1687 1719 2.516930 CCCCATGCCACGATCCAC 60.517 66.667 0.00 0.00 0.00 4.02
1758 1790 9.995003 AATTTACAGGCAAAACTGATTGATAAA 57.005 25.926 0.00 0.00 40.97 1.40
2008 2040 2.265367 TGAAGCTCACATCCCTACCAA 58.735 47.619 0.00 0.00 0.00 3.67
2079 2111 7.970614 GGCAAAAAGGACAAGAAGAATATACAG 59.029 37.037 0.00 0.00 0.00 2.74
2487 2519 3.074412 AGGTCAAAGTGCAACGGAATAG 58.926 45.455 0.00 0.00 45.86 1.73
2492 2524 1.008538 GCAGGTCAAAGTGCAACGG 60.009 57.895 0.00 0.00 45.86 4.44
2597 2629 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2598 2630 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2599 2631 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2600 2632 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2601 2633 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2602 2634 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2603 2635 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2604 2636 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2605 2637 6.302313 CGTTTTGATGACAAGTATTTTCGGAC 59.698 38.462 0.00 0.00 37.32 4.79
2606 2638 6.203145 TCGTTTTGATGACAAGTATTTTCGGA 59.797 34.615 0.00 0.00 37.32 4.55
2607 2639 6.367421 TCGTTTTGATGACAAGTATTTTCGG 58.633 36.000 0.00 0.00 37.32 4.30
2608 2640 7.830217 TTCGTTTTGATGACAAGTATTTTCG 57.170 32.000 0.00 0.00 37.32 3.46
2613 2645 9.840427 CCTTTTATTCGTTTTGATGACAAGTAT 57.160 29.630 0.00 0.00 37.32 2.12
2614 2646 8.293867 CCCTTTTATTCGTTTTGATGACAAGTA 58.706 33.333 0.00 0.00 37.32 2.24
2615 2647 7.145323 CCCTTTTATTCGTTTTGATGACAAGT 58.855 34.615 0.00 0.00 37.32 3.16
2616 2648 6.586082 CCCCTTTTATTCGTTTTGATGACAAG 59.414 38.462 0.00 0.00 37.32 3.16
2617 2649 6.265649 TCCCCTTTTATTCGTTTTGATGACAA 59.734 34.615 0.00 0.00 0.00 3.18
2618 2650 5.770663 TCCCCTTTTATTCGTTTTGATGACA 59.229 36.000 0.00 0.00 0.00 3.58
2619 2651 6.262193 TCCCCTTTTATTCGTTTTGATGAC 57.738 37.500 0.00 0.00 0.00 3.06
2620 2652 6.435904 ACATCCCCTTTTATTCGTTTTGATGA 59.564 34.615 0.00 0.00 32.39 2.92
2621 2653 6.630071 ACATCCCCTTTTATTCGTTTTGATG 58.370 36.000 0.00 0.00 33.80 3.07
2622 2654 6.850752 ACATCCCCTTTTATTCGTTTTGAT 57.149 33.333 0.00 0.00 0.00 2.57
2623 2655 7.832187 AGATACATCCCCTTTTATTCGTTTTGA 59.168 33.333 0.00 0.00 0.00 2.69
2624 2656 7.996385 AGATACATCCCCTTTTATTCGTTTTG 58.004 34.615 0.00 0.00 0.00 2.44
2625 2657 9.338622 CTAGATACATCCCCTTTTATTCGTTTT 57.661 33.333 0.00 0.00 0.00 2.43
2626 2658 8.711170 TCTAGATACATCCCCTTTTATTCGTTT 58.289 33.333 0.00 0.00 0.00 3.60
2627 2659 8.258850 TCTAGATACATCCCCTTTTATTCGTT 57.741 34.615 0.00 0.00 0.00 3.85
2628 2660 7.850935 TCTAGATACATCCCCTTTTATTCGT 57.149 36.000 0.00 0.00 0.00 3.85
2629 2661 8.314751 ACATCTAGATACATCCCCTTTTATTCG 58.685 37.037 4.54 0.00 0.00 3.34
2637 2669 9.845214 ACTAAAATACATCTAGATACATCCCCT 57.155 33.333 4.54 0.00 0.00 4.79
2661 2693 8.816894 TGGACAAAAAGAGATGTATCTAGAACT 58.183 33.333 0.00 0.00 37.25 3.01
2662 2694 9.606631 ATGGACAAAAAGAGATGTATCTAGAAC 57.393 33.333 0.00 0.00 37.25 3.01
2667 2699 9.300681 TCAAAATGGACAAAAAGAGATGTATCT 57.699 29.630 0.00 0.00 40.50 1.98
2669 2701 9.865321 CATCAAAATGGACAAAAAGAGATGTAT 57.135 29.630 0.00 0.00 0.00 2.29
2670 2702 9.076781 TCATCAAAATGGACAAAAAGAGATGTA 57.923 29.630 0.00 0.00 33.42 2.29
2671 2703 7.869429 GTCATCAAAATGGACAAAAAGAGATGT 59.131 33.333 0.00 0.00 33.42 3.06
2672 2704 7.868922 TGTCATCAAAATGGACAAAAAGAGATG 59.131 33.333 0.00 0.00 33.42 2.90
2673 2705 7.954835 TGTCATCAAAATGGACAAAAAGAGAT 58.045 30.769 0.00 0.00 33.42 2.75
2674 2706 7.345422 TGTCATCAAAATGGACAAAAAGAGA 57.655 32.000 0.00 0.00 33.42 3.10
2675 2707 7.707893 ACTTGTCATCAAAATGGACAAAAAGAG 59.292 33.333 7.70 0.00 34.98 2.85
2676 2708 7.492020 CACTTGTCATCAAAATGGACAAAAAGA 59.508 33.333 7.70 0.00 34.98 2.52
2677 2709 7.278424 ACACTTGTCATCAAAATGGACAAAAAG 59.722 33.333 7.70 0.11 34.98 2.27
2678 2710 7.102346 ACACTTGTCATCAAAATGGACAAAAA 58.898 30.769 7.70 0.00 34.98 1.94
2679 2711 6.638610 ACACTTGTCATCAAAATGGACAAAA 58.361 32.000 7.70 0.00 34.98 2.44
2680 2712 6.219417 ACACTTGTCATCAAAATGGACAAA 57.781 33.333 7.70 0.00 34.98 2.83
2681 2713 5.850557 ACACTTGTCATCAAAATGGACAA 57.149 34.783 0.00 0.00 34.59 3.18
2682 2714 5.850557 AACACTTGTCATCAAAATGGACA 57.149 34.783 0.00 0.00 33.42 4.02
2683 2715 6.074888 CGAAAACACTTGTCATCAAAATGGAC 60.075 38.462 0.00 0.00 33.42 4.02
2684 2716 5.976534 CGAAAACACTTGTCATCAAAATGGA 59.023 36.000 0.00 0.00 33.42 3.41
2685 2717 5.175491 CCGAAAACACTTGTCATCAAAATGG 59.825 40.000 0.00 0.00 33.42 3.16
2686 2718 5.976534 TCCGAAAACACTTGTCATCAAAATG 59.023 36.000 0.00 0.00 32.87 2.32
2687 2719 5.977129 GTCCGAAAACACTTGTCATCAAAAT 59.023 36.000 0.00 0.00 32.87 1.82
2688 2720 5.336744 GTCCGAAAACACTTGTCATCAAAA 58.663 37.500 0.00 0.00 32.87 2.44
2689 2721 4.495019 CGTCCGAAAACACTTGTCATCAAA 60.495 41.667 0.00 0.00 32.87 2.69
2690 2722 3.001838 CGTCCGAAAACACTTGTCATCAA 59.998 43.478 0.00 0.00 0.00 2.57
2691 2723 2.542178 CGTCCGAAAACACTTGTCATCA 59.458 45.455 0.00 0.00 0.00 3.07
2692 2724 2.096417 CCGTCCGAAAACACTTGTCATC 60.096 50.000 0.00 0.00 0.00 2.92
2693 2725 1.871039 CCGTCCGAAAACACTTGTCAT 59.129 47.619 0.00 0.00 0.00 3.06
2694 2726 1.134759 TCCGTCCGAAAACACTTGTCA 60.135 47.619 0.00 0.00 0.00 3.58
2695 2727 1.525619 CTCCGTCCGAAAACACTTGTC 59.474 52.381 0.00 0.00 0.00 3.18
2696 2728 1.578583 CTCCGTCCGAAAACACTTGT 58.421 50.000 0.00 0.00 0.00 3.16
2697 2729 0.865769 CCTCCGTCCGAAAACACTTG 59.134 55.000 0.00 0.00 0.00 3.16
2698 2730 0.250166 CCCTCCGTCCGAAAACACTT 60.250 55.000 0.00 0.00 0.00 3.16
2699 2731 1.117142 TCCCTCCGTCCGAAAACACT 61.117 55.000 0.00 0.00 0.00 3.55
2700 2732 0.669625 CTCCCTCCGTCCGAAAACAC 60.670 60.000 0.00 0.00 0.00 3.32
2701 2733 1.117142 ACTCCCTCCGTCCGAAAACA 61.117 55.000 0.00 0.00 0.00 2.83
2702 2734 0.890683 TACTCCCTCCGTCCGAAAAC 59.109 55.000 0.00 0.00 0.00 2.43
2703 2735 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
2704 2736 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
2705 2737 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
2706 2738 1.135094 ATACTACTCCCTCCGTCCGA 58.865 55.000 0.00 0.00 0.00 4.55
2707 2739 1.236628 CATACTACTCCCTCCGTCCG 58.763 60.000 0.00 0.00 0.00 4.79
2708 2740 0.960286 GCATACTACTCCCTCCGTCC 59.040 60.000 0.00 0.00 0.00 4.79
2709 2741 1.688772 TGCATACTACTCCCTCCGTC 58.311 55.000 0.00 0.00 0.00 4.79
2710 2742 1.755380 GTTGCATACTACTCCCTCCGT 59.245 52.381 0.00 0.00 0.00 4.69
2711 2743 2.032620 AGTTGCATACTACTCCCTCCG 58.967 52.381 0.00 0.00 34.56 4.63
2712 2744 2.766828 ACAGTTGCATACTACTCCCTCC 59.233 50.000 0.00 0.00 34.56 4.30
2713 2745 3.447586 TGACAGTTGCATACTACTCCCTC 59.552 47.826 0.00 0.00 34.56 4.30
2714 2746 3.441101 TGACAGTTGCATACTACTCCCT 58.559 45.455 0.00 0.00 34.56 4.20
2715 2747 3.430929 CCTGACAGTTGCATACTACTCCC 60.431 52.174 0.93 0.00 34.56 4.30
2716 2748 3.195825 ACCTGACAGTTGCATACTACTCC 59.804 47.826 0.93 0.00 34.56 3.85
2717 2749 4.082190 TCACCTGACAGTTGCATACTACTC 60.082 45.833 0.93 0.00 34.56 2.59
2718 2750 3.832490 TCACCTGACAGTTGCATACTACT 59.168 43.478 0.93 0.00 34.56 2.57
2719 2751 4.188247 TCACCTGACAGTTGCATACTAC 57.812 45.455 0.93 0.00 34.56 2.73
2720 2752 4.882842 TTCACCTGACAGTTGCATACTA 57.117 40.909 0.93 0.00 34.56 1.82
2721 2753 3.769739 TTCACCTGACAGTTGCATACT 57.230 42.857 0.93 0.00 37.68 2.12
2736 2768 1.797537 GCGCACGAAGCATTTCACC 60.798 57.895 0.30 0.00 46.13 4.02
2766 2798 7.706607 GGACAAAAAGAACTGCAAGAAGTTTAT 59.293 33.333 0.00 0.00 40.48 1.40
2796 2828 8.535335 AGCTGAAAGATTGTTCTAGAACAGATA 58.465 33.333 31.23 21.03 44.46 1.98
2882 2914 7.417612 AGTACTTTAGCTTCAAAATGTGTGTG 58.582 34.615 0.00 0.00 0.00 3.82
2883 2915 7.568199 AGTACTTTAGCTTCAAAATGTGTGT 57.432 32.000 0.00 0.00 0.00 3.72
3016 3049 4.713792 ATGACAAGTCCCTGAAAGAGTT 57.286 40.909 0.00 0.00 34.07 3.01
3019 3052 4.705110 TGAATGACAAGTCCCTGAAAGA 57.295 40.909 0.00 0.00 34.07 2.52
3124 3157 1.750206 ACAGCTGTGTGTGCATGAAAA 59.250 42.857 20.97 0.00 34.75 2.29
3265 3298 6.627065 GCAAATAAAGTATAAGTGCAGCCCAA 60.627 38.462 0.00 0.00 0.00 4.12
3424 3457 1.630878 GATCCTCAAGGGTGACAAGGT 59.369 52.381 0.00 0.00 36.25 3.50
3616 3649 2.294078 GGTGGAGGTGGAGGTGGAG 61.294 68.421 0.00 0.00 0.00 3.86
3617 3650 2.203938 GGTGGAGGTGGAGGTGGA 60.204 66.667 0.00 0.00 0.00 4.02
3618 3651 1.842381 GAAGGTGGAGGTGGAGGTGG 61.842 65.000 0.00 0.00 0.00 4.61
3619 3652 1.127567 TGAAGGTGGAGGTGGAGGTG 61.128 60.000 0.00 0.00 0.00 4.00
3620 3653 1.128188 GTGAAGGTGGAGGTGGAGGT 61.128 60.000 0.00 0.00 0.00 3.85
3621 3654 1.679898 GTGAAGGTGGAGGTGGAGG 59.320 63.158 0.00 0.00 0.00 4.30
3662 3701 4.265056 AGAGGTTTTGGCCCGCGT 62.265 61.111 4.92 0.00 0.00 6.01
3895 3934 6.770785 TGAAGAAACTAATAAAGTGCCAGTGT 59.229 34.615 0.00 0.00 38.88 3.55
4136 4182 1.074405 TGGAAGAATGCAAGTCTGGCT 59.926 47.619 0.00 0.00 42.57 4.75
4165 4211 5.349543 GGGACTGCAATTGACAAATGAATTC 59.650 40.000 10.34 0.00 0.00 2.17
4489 4535 3.916989 ACTTATTTTGGGACAGAGGGAGT 59.083 43.478 0.00 0.00 42.39 3.85
4490 4536 4.576330 ACTTATTTTGGGACAGAGGGAG 57.424 45.455 0.00 0.00 42.39 4.30
4491 4537 6.652205 AATACTTATTTTGGGACAGAGGGA 57.348 37.500 0.00 0.00 42.39 4.20
4492 4538 6.889722 TGAAATACTTATTTTGGGACAGAGGG 59.110 38.462 0.00 0.00 42.39 4.30
4493 4539 7.415653 GCTGAAATACTTATTTTGGGACAGAGG 60.416 40.741 0.00 0.00 42.39 3.69
4494 4540 7.415653 GGCTGAAATACTTATTTTGGGACAGAG 60.416 40.741 0.00 0.00 42.39 3.35
4495 4541 6.377146 GGCTGAAATACTTATTTTGGGACAGA 59.623 38.462 0.00 0.00 42.39 3.41
4496 4542 6.378280 AGGCTGAAATACTTATTTTGGGACAG 59.622 38.462 0.00 0.00 42.39 3.51
4497 4543 6.252995 AGGCTGAAATACTTATTTTGGGACA 58.747 36.000 0.00 0.00 36.13 4.02
4498 4544 6.775594 AGGCTGAAATACTTATTTTGGGAC 57.224 37.500 0.00 0.00 36.13 4.46
4499 4545 8.113462 ACTAAGGCTGAAATACTTATTTTGGGA 58.887 33.333 0.00 0.00 36.13 4.37
4500 4546 8.293699 ACTAAGGCTGAAATACTTATTTTGGG 57.706 34.615 0.00 0.00 36.13 4.12
4508 4554 8.784043 CAAAGTTGTACTAAGGCTGAAATACTT 58.216 33.333 0.00 0.00 0.00 2.24
4509 4555 7.937394 ACAAAGTTGTACTAAGGCTGAAATACT 59.063 33.333 0.00 0.00 40.16 2.12
4510 4556 8.095937 ACAAAGTTGTACTAAGGCTGAAATAC 57.904 34.615 0.00 0.00 40.16 1.89
4535 4581 8.689061 TGTCTCAACTTTGTACTAACTTCAGTA 58.311 33.333 0.00 0.00 0.00 2.74
4536 4582 7.491696 GTGTCTCAACTTTGTACTAACTTCAGT 59.508 37.037 0.00 0.00 0.00 3.41
4537 4583 7.707035 AGTGTCTCAACTTTGTACTAACTTCAG 59.293 37.037 0.00 0.00 0.00 3.02
4538 4584 7.553334 AGTGTCTCAACTTTGTACTAACTTCA 58.447 34.615 0.00 0.00 0.00 3.02
4539 4585 8.421673 AAGTGTCTCAACTTTGTACTAACTTC 57.578 34.615 0.00 0.00 37.05 3.01
4545 4591 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
4546 4592 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
4547 4593 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
4548 4594 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
4549 4595 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
4550 4596 6.605594 TGTCCCAAAATAAGTGTCTCAACTTT 59.394 34.615 0.00 0.00 40.77 2.66
4551 4597 6.126409 TGTCCCAAAATAAGTGTCTCAACTT 58.874 36.000 0.00 0.00 42.89 2.66
4552 4598 5.690865 TGTCCCAAAATAAGTGTCTCAACT 58.309 37.500 0.00 0.00 0.00 3.16
4553 4599 5.763204 TCTGTCCCAAAATAAGTGTCTCAAC 59.237 40.000 0.00 0.00 0.00 3.18
4554 4600 5.935945 TCTGTCCCAAAATAAGTGTCTCAA 58.064 37.500 0.00 0.00 0.00 3.02
4555 4601 5.513094 CCTCTGTCCCAAAATAAGTGTCTCA 60.513 44.000 0.00 0.00 0.00 3.27
4556 4602 4.938226 CCTCTGTCCCAAAATAAGTGTCTC 59.062 45.833 0.00 0.00 0.00 3.36
4557 4603 4.263506 CCCTCTGTCCCAAAATAAGTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
4558 4604 4.010349 CCCTCTGTCCCAAAATAAGTGTC 58.990 47.826 0.00 0.00 0.00 3.67
4559 4605 3.655777 TCCCTCTGTCCCAAAATAAGTGT 59.344 43.478 0.00 0.00 0.00 3.55
4560 4606 4.265073 CTCCCTCTGTCCCAAAATAAGTG 58.735 47.826 0.00 0.00 0.00 3.16
4561 4607 3.308473 GCTCCCTCTGTCCCAAAATAAGT 60.308 47.826 0.00 0.00 0.00 2.24
4562 4608 3.282885 GCTCCCTCTGTCCCAAAATAAG 58.717 50.000 0.00 0.00 0.00 1.73
4563 4609 2.647299 TGCTCCCTCTGTCCCAAAATAA 59.353 45.455 0.00 0.00 0.00 1.40
4564 4610 2.274542 TGCTCCCTCTGTCCCAAAATA 58.725 47.619 0.00 0.00 0.00 1.40
4565 4611 1.075601 TGCTCCCTCTGTCCCAAAAT 58.924 50.000 0.00 0.00 0.00 1.82
4566 4612 1.075601 ATGCTCCCTCTGTCCCAAAA 58.924 50.000 0.00 0.00 0.00 2.44
4567 4613 1.965414 TATGCTCCCTCTGTCCCAAA 58.035 50.000 0.00 0.00 0.00 3.28
4568 4614 2.196742 ATATGCTCCCTCTGTCCCAA 57.803 50.000 0.00 0.00 0.00 4.12
4569 4615 2.196742 AATATGCTCCCTCTGTCCCA 57.803 50.000 0.00 0.00 0.00 4.37
4570 4616 4.917906 AATAATATGCTCCCTCTGTCCC 57.082 45.455 0.00 0.00 0.00 4.46
4571 4617 7.335422 CACATTAATAATATGCTCCCTCTGTCC 59.665 40.741 0.00 0.00 0.00 4.02
4572 4618 7.880195 ACACATTAATAATATGCTCCCTCTGTC 59.120 37.037 0.00 0.00 0.00 3.51
4573 4619 7.749666 ACACATTAATAATATGCTCCCTCTGT 58.250 34.615 0.00 0.00 0.00 3.41
4574 4620 8.627208 AACACATTAATAATATGCTCCCTCTG 57.373 34.615 0.00 0.00 0.00 3.35
4701 4747 4.152580 GTCTTGTCGATGAGGAAAGGAAAC 59.847 45.833 0.00 0.00 0.00 2.78
4866 4939 6.746120 TGATACCTTCGCTACTTAGGAAATC 58.254 40.000 0.00 0.00 33.21 2.17
4936 5010 0.179215 GCAGCTGTGCGTACAATGAC 60.179 55.000 16.64 8.94 40.71 3.06
5023 5097 5.049405 GTGCTTTAATCTGGACATATTCCCG 60.049 44.000 0.00 0.00 45.17 5.14
5310 5384 2.297698 TTTCGGACAGAGGGAGTACA 57.702 50.000 0.00 0.00 0.00 2.90
5311 5385 3.586892 CTTTTTCGGACAGAGGGAGTAC 58.413 50.000 0.00 0.00 0.00 2.73
5312 5386 2.028385 GCTTTTTCGGACAGAGGGAGTA 60.028 50.000 0.00 0.00 0.00 2.59
5313 5387 1.270893 GCTTTTTCGGACAGAGGGAGT 60.271 52.381 0.00 0.00 0.00 3.85
5314 5388 1.002544 AGCTTTTTCGGACAGAGGGAG 59.997 52.381 0.00 0.00 0.00 4.30
5315 5389 1.056660 AGCTTTTTCGGACAGAGGGA 58.943 50.000 0.00 0.00 0.00 4.20
5316 5390 1.537202 CAAGCTTTTTCGGACAGAGGG 59.463 52.381 0.00 0.00 0.00 4.30
5317 5391 2.222027 ACAAGCTTTTTCGGACAGAGG 58.778 47.619 0.00 0.00 0.00 3.69
5318 5392 2.224314 GGACAAGCTTTTTCGGACAGAG 59.776 50.000 0.00 0.00 0.00 3.35
5319 5393 2.218603 GGACAAGCTTTTTCGGACAGA 58.781 47.619 0.00 0.00 0.00 3.41
5320 5394 1.266989 GGGACAAGCTTTTTCGGACAG 59.733 52.381 0.00 0.00 0.00 3.51
5321 5395 1.314730 GGGACAAGCTTTTTCGGACA 58.685 50.000 0.00 0.00 0.00 4.02
5322 5396 1.314730 TGGGACAAGCTTTTTCGGAC 58.685 50.000 0.00 0.00 31.92 4.79
5323 5397 3.811031 TGGGACAAGCTTTTTCGGA 57.189 47.368 0.00 0.00 31.92 4.55
5333 5407 5.893518 TTGAGGGACAAGCTTGGGACAAG 62.894 52.174 29.18 3.71 37.48 3.16
5334 5408 4.092026 TTGAGGGACAAGCTTGGGACAA 62.092 50.000 29.18 21.59 37.48 3.18
5335 5409 1.059584 TGAGGGACAAGCTTGGGACA 61.060 55.000 29.18 17.71 0.00 4.02
5336 5410 0.110486 TTGAGGGACAAGCTTGGGAC 59.890 55.000 29.18 18.90 34.20 4.46
5337 5411 0.850100 TTTGAGGGACAAGCTTGGGA 59.150 50.000 29.18 4.51 39.77 4.37
5338 5412 1.547372 CATTTGAGGGACAAGCTTGGG 59.453 52.381 29.18 6.83 39.77 4.12
5339 5413 1.547372 CCATTTGAGGGACAAGCTTGG 59.453 52.381 29.18 12.28 39.77 3.61
5340 5414 2.517959 TCCATTTGAGGGACAAGCTTG 58.482 47.619 24.84 24.84 39.77 4.01
5341 5415 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
5342 5416 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
5343 5417 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
5344 5418 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
5345 5419 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
5346 5420 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
5347 5421 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
5348 5422 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
5349 5423 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
5350 5424 5.862845 AGTGCTAGATACATCCATTTGAGG 58.137 41.667 0.00 0.00 0.00 3.86
5351 5425 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
5352 5426 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
5353 5427 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
5354 5428 8.486210 TCAAGTTAGTGCTAGATACATCCATTT 58.514 33.333 0.00 0.00 0.00 2.32
5355 5429 8.023021 TCAAGTTAGTGCTAGATACATCCATT 57.977 34.615 0.00 0.00 0.00 3.16
5356 5430 7.603180 TCAAGTTAGTGCTAGATACATCCAT 57.397 36.000 0.00 0.00 0.00 3.41
5357 5431 7.436933 CATCAAGTTAGTGCTAGATACATCCA 58.563 38.462 0.00 0.00 0.00 3.41
5358 5432 6.367422 GCATCAAGTTAGTGCTAGATACATCC 59.633 42.308 0.00 0.00 36.02 3.51
5359 5433 7.151308 AGCATCAAGTTAGTGCTAGATACATC 58.849 38.462 11.30 0.00 46.54 3.06
5360 5434 7.060383 AGCATCAAGTTAGTGCTAGATACAT 57.940 36.000 11.30 0.00 46.54 2.29
5361 5435 6.471233 AGCATCAAGTTAGTGCTAGATACA 57.529 37.500 11.30 0.00 46.54 2.29
5367 5441 7.582667 TGTATCTAGCATCAAGTTAGTGCTA 57.417 36.000 16.22 16.22 46.54 3.49
5369 5443 6.367422 GGATGTATCTAGCATCAAGTTAGTGC 59.633 42.308 9.99 4.02 43.17 4.40
5370 5444 7.436933 TGGATGTATCTAGCATCAAGTTAGTG 58.563 38.462 9.99 0.00 43.17 2.74
5371 5445 7.603180 TGGATGTATCTAGCATCAAGTTAGT 57.397 36.000 9.99 0.00 43.17 2.24
5372 5446 9.499479 AAATGGATGTATCTAGCATCAAGTTAG 57.501 33.333 9.99 0.00 43.17 2.34
5373 5447 9.276590 CAAATGGATGTATCTAGCATCAAGTTA 57.723 33.333 9.99 0.00 43.17 2.24
5374 5448 7.994911 TCAAATGGATGTATCTAGCATCAAGTT 59.005 33.333 9.99 3.16 43.17 2.66
5375 5449 7.512130 TCAAATGGATGTATCTAGCATCAAGT 58.488 34.615 9.99 0.00 43.17 3.16
5376 5450 7.119407 CCTCAAATGGATGTATCTAGCATCAAG 59.881 40.741 9.99 0.59 43.17 3.02
5377 5451 6.938596 CCTCAAATGGATGTATCTAGCATCAA 59.061 38.462 9.99 0.98 43.17 2.57
5378 5452 6.470278 CCTCAAATGGATGTATCTAGCATCA 58.530 40.000 9.99 0.00 43.17 3.07
5379 5453 5.879223 CCCTCAAATGGATGTATCTAGCATC 59.121 44.000 1.37 1.37 41.30 3.91
5380 5454 5.549228 TCCCTCAAATGGATGTATCTAGCAT 59.451 40.000 0.00 0.00 0.00 3.79
5381 5455 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
5382 5456 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
5383 5457 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
5384 5458 6.386927 ACTTGTCCCTCAAATGGATGTATCTA 59.613 38.462 0.00 0.00 35.48 1.98
5385 5459 5.192522 ACTTGTCCCTCAAATGGATGTATCT 59.807 40.000 0.00 0.00 35.48 1.98
5386 5460 5.440610 ACTTGTCCCTCAAATGGATGTATC 58.559 41.667 0.00 0.00 35.48 2.24
5387 5461 5.456921 ACTTGTCCCTCAAATGGATGTAT 57.543 39.130 0.00 0.00 35.48 2.29
5388 5462 4.927267 ACTTGTCCCTCAAATGGATGTA 57.073 40.909 0.00 0.00 35.48 2.29
5389 5463 3.814504 ACTTGTCCCTCAAATGGATGT 57.185 42.857 0.00 0.00 35.48 3.06
5390 5464 5.473066 AAAACTTGTCCCTCAAATGGATG 57.527 39.130 0.00 0.00 35.48 3.51
5410 5484 3.967332 ATACTCCCTCCGTTCGAAAAA 57.033 42.857 0.00 0.00 0.00 1.94
5411 5485 3.967332 AATACTCCCTCCGTTCGAAAA 57.033 42.857 0.00 0.00 0.00 2.29
5412 5486 5.603170 AATAATACTCCCTCCGTTCGAAA 57.397 39.130 0.00 0.00 0.00 3.46
5413 5487 5.603170 AAATAATACTCCCTCCGTTCGAA 57.397 39.130 0.00 0.00 0.00 3.71
5414 5488 5.603170 AAAATAATACTCCCTCCGTTCGA 57.397 39.130 0.00 0.00 0.00 3.71
5415 5489 5.051240 CGAAAAATAATACTCCCTCCGTTCG 60.051 44.000 0.00 0.00 0.00 3.95
5416 5490 5.814188 ACGAAAAATAATACTCCCTCCGTTC 59.186 40.000 0.00 0.00 0.00 3.95
5417 5491 5.737860 ACGAAAAATAATACTCCCTCCGTT 58.262 37.500 0.00 0.00 0.00 4.44
5418 5492 5.349061 ACGAAAAATAATACTCCCTCCGT 57.651 39.130 0.00 0.00 0.00 4.69
5419 5493 6.510536 ACTACGAAAAATAATACTCCCTCCG 58.489 40.000 0.00 0.00 0.00 4.63
5420 5494 8.728337 AAACTACGAAAAATAATACTCCCTCC 57.272 34.615 0.00 0.00 0.00 4.30
5729 5803 5.883115 TGATCAGGTAAATTAACGGCATCAA 59.117 36.000 0.00 0.00 0.00 2.57
5768 5842 7.343833 AGGTTCTAAAATGCATCCAGATCATTT 59.656 33.333 0.00 0.00 40.80 2.32
5784 5858 9.569122 AGCAGTTCTATGTTTTAGGTTCTAAAA 57.431 29.630 8.30 8.30 0.00 1.52
5785 5859 9.216117 GAGCAGTTCTATGTTTTAGGTTCTAAA 57.784 33.333 0.00 0.00 0.00 1.85
5896 5993 6.106003 GCAAATATTACCCCAAAACTTCAGG 58.894 40.000 0.00 0.00 0.00 3.86
5912 6009 6.488715 GGGGAATCTCTCCTATGCAAATATT 58.511 40.000 0.00 0.00 44.68 1.28
5974 6071 6.245408 GCCTATTGTGTATATTTGGATGGGA 58.755 40.000 0.00 0.00 0.00 4.37
6085 6182 0.462759 CCTGCTTCCGGAATGAGGAC 60.463 60.000 27.04 11.48 37.53 3.85
6094 6191 1.661341 CTTCTGAATCCTGCTTCCGG 58.339 55.000 0.00 0.00 0.00 5.14
6095 6192 1.012841 GCTTCTGAATCCTGCTTCCG 58.987 55.000 0.00 0.00 0.00 4.30
6241 6338 6.593770 CACAAGTGCAAGTGATAACATACCTA 59.406 38.462 8.98 0.00 37.97 3.08
6285 6382 7.643579 ACTGAAGAAGACAATAAACTTTCAGC 58.356 34.615 9.95 0.00 35.85 4.26
6291 6388 8.964476 TCTTGAACTGAAGAAGACAATAAACT 57.036 30.769 0.00 0.00 0.00 2.66
6497 6594 6.876257 AGCAAGGATAAGAAACTACAGAACAG 59.124 38.462 0.00 0.00 0.00 3.16
6848 6945 1.342819 GAGCTGTCAGTTGTCCAGTCT 59.657 52.381 0.93 0.00 0.00 3.24
6849 6946 1.789506 GAGCTGTCAGTTGTCCAGTC 58.210 55.000 0.93 0.00 0.00 3.51
6852 6949 0.315251 CTCGAGCTGTCAGTTGTCCA 59.685 55.000 0.00 0.00 0.00 4.02
7012 7109 5.382303 CAACTTATTTACCGTGTTGCTCTG 58.618 41.667 0.00 0.00 32.99 3.35
7024 7121 4.884164 AGCATCAGCCTCCAACTTATTTAC 59.116 41.667 0.00 0.00 43.56 2.01
7027 7124 3.054139 TGAGCATCAGCCTCCAACTTATT 60.054 43.478 0.00 0.00 42.56 1.40
7145 7242 8.668353 TGATCACAGCAATCAAATTAAGACTAC 58.332 33.333 0.00 0.00 30.37 2.73
7165 7262 0.392193 CACCCTGGCTGACTGATCAC 60.392 60.000 0.00 0.00 0.00 3.06
7294 7391 6.128282 GGCATCGACAGAAAATTGTAAAGAGA 60.128 38.462 0.00 0.00 0.00 3.10
7392 7489 4.404640 AGTTTACTTTGCTTACTTCCCCC 58.595 43.478 0.00 0.00 0.00 5.40
7393 7490 5.181433 CAGAGTTTACTTTGCTTACTTCCCC 59.819 44.000 0.00 0.00 0.00 4.81
7611 7708 6.264518 CCACACATTTACAAGACTTAAGGGTT 59.735 38.462 7.53 0.00 0.00 4.11
7612 7709 5.768164 CCACACATTTACAAGACTTAAGGGT 59.232 40.000 7.53 2.35 0.00 4.34
7644 7741 0.520404 GTGTCGACTGGCTAACGAGA 59.480 55.000 17.92 0.00 36.74 4.04
7802 7899 5.430089 AGGTAAGAAAGAGTGGGCATCTAAT 59.570 40.000 0.00 0.00 0.00 1.73
7803 7900 4.783227 AGGTAAGAAAGAGTGGGCATCTAA 59.217 41.667 0.00 0.00 0.00 2.10
7838 7935 8.030106 CCTAATTAGGTAATTCGCAACCAAAAA 58.970 33.333 21.62 0.00 38.30 1.94
7839 7936 7.393796 TCCTAATTAGGTAATTCGCAACCAAAA 59.606 33.333 27.14 2.89 44.02 2.44
7840 7937 6.885376 TCCTAATTAGGTAATTCGCAACCAAA 59.115 34.615 27.14 3.25 44.02 3.28
7841 7938 6.416415 TCCTAATTAGGTAATTCGCAACCAA 58.584 36.000 27.14 3.86 44.02 3.67
7842 7939 5.991861 TCCTAATTAGGTAATTCGCAACCA 58.008 37.500 27.14 4.27 44.02 3.67
7843 7940 7.506328 AATCCTAATTAGGTAATTCGCAACC 57.494 36.000 27.14 0.00 44.02 3.77
7844 7941 7.288672 CGAATCCTAATTAGGTAATTCGCAAC 58.711 38.462 33.22 16.59 45.11 4.17
7845 7942 7.416154 CGAATCCTAATTAGGTAATTCGCAA 57.584 36.000 33.22 16.39 45.11 4.85
7849 7946 7.541437 CCTCGTCGAATCCTAATTAGGTAATTC 59.459 40.741 27.14 25.22 44.02 2.17
7850 7947 7.015001 ACCTCGTCGAATCCTAATTAGGTAATT 59.985 37.037 27.14 20.77 44.02 1.40
7851 7948 6.492772 ACCTCGTCGAATCCTAATTAGGTAAT 59.507 38.462 27.14 14.27 44.02 1.89
7852 7949 5.829924 ACCTCGTCGAATCCTAATTAGGTAA 59.170 40.000 27.14 12.65 44.02 2.85
7853 7950 5.380043 ACCTCGTCGAATCCTAATTAGGTA 58.620 41.667 27.14 16.25 44.02 3.08
7854 7951 4.213513 ACCTCGTCGAATCCTAATTAGGT 58.786 43.478 27.14 12.32 44.02 3.08
7855 7952 4.277672 TGACCTCGTCGAATCCTAATTAGG 59.722 45.833 23.54 23.54 38.96 2.69
7856 7953 5.213675 GTGACCTCGTCGAATCCTAATTAG 58.786 45.833 5.43 5.43 34.95 1.73
7857 7954 4.641541 TGTGACCTCGTCGAATCCTAATTA 59.358 41.667 0.00 0.00 34.95 1.40
7858 7955 3.446161 TGTGACCTCGTCGAATCCTAATT 59.554 43.478 0.00 0.00 34.95 1.40
7859 7956 3.021695 TGTGACCTCGTCGAATCCTAAT 58.978 45.455 0.00 0.00 34.95 1.73
7860 7957 2.439409 TGTGACCTCGTCGAATCCTAA 58.561 47.619 0.00 0.00 34.95 2.69
7861 7958 2.118313 TGTGACCTCGTCGAATCCTA 57.882 50.000 0.00 0.00 34.95 2.94
7862 7959 1.254026 TTGTGACCTCGTCGAATCCT 58.746 50.000 0.00 0.00 34.95 3.24
7863 7960 2.295253 ATTGTGACCTCGTCGAATCC 57.705 50.000 0.00 0.00 34.95 3.01
7871 7968 5.880054 AGGTTATTTGAATTGTGACCTCG 57.120 39.130 0.00 0.00 30.59 4.63
7990 8118 9.584008 AAGAGATCATTGCATGTAGGATTATTT 57.416 29.630 0.00 0.00 0.00 1.40
8012 8140 3.181406 TGATAGGGTCCCCAGGATAAGAG 60.181 52.174 3.51 0.00 38.92 2.85
8026 8154 2.905085 CAGCATCTCCATCTGATAGGGT 59.095 50.000 0.00 0.00 0.00 4.34
8028 8156 4.316645 CAACAGCATCTCCATCTGATAGG 58.683 47.826 0.00 0.00 0.00 2.57
8030 8158 3.072038 CCCAACAGCATCTCCATCTGATA 59.928 47.826 0.00 0.00 0.00 2.15
8031 8159 2.158652 CCCAACAGCATCTCCATCTGAT 60.159 50.000 0.00 0.00 0.00 2.90
8122 8250 0.868406 CGGAGAACAAGAACAGGTGC 59.132 55.000 0.00 0.00 0.00 5.01
8191 8319 1.782181 GGCGTTCGAGAAGTTCAGC 59.218 57.895 5.50 0.91 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.