Multiple sequence alignment - TraesCS6A01G162900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G162900 chr6A 100.000 3939 0 0 1 3939 158076455 158072517 0.000000e+00 7275.0
1 TraesCS6A01G162900 chr6A 100.000 319 0 0 4329 4647 158072127 158071809 1.440000e-164 590.0
2 TraesCS6A01G162900 chr6A 97.297 296 5 2 2478 2770 472393649 472393944 2.500000e-137 499.0
3 TraesCS6A01G162900 chr6B 96.432 1177 30 1 2763 3939 216691970 216693134 0.000000e+00 1930.0
4 TraesCS6A01G162900 chr6B 94.196 1051 32 11 739 1776 216690046 216691080 0.000000e+00 1576.0
5 TraesCS6A01G162900 chr6B 94.192 396 6 2 1759 2138 216691100 216691494 5.180000e-164 588.0
6 TraesCS6A01G162900 chr6B 90.060 332 21 4 1 322 704415712 704415383 2.000000e-113 420.0
7 TraesCS6A01G162900 chr6B 90.541 222 19 2 326 546 216688634 216688854 4.550000e-75 292.0
8 TraesCS6A01G162900 chr6B 90.952 210 10 7 543 747 216689795 216690000 1.650000e-69 274.0
9 TraesCS6A01G162900 chr6B 92.553 94 7 0 2336 2429 216691654 216691747 8.110000e-28 135.0
10 TraesCS6A01G162900 chr6B 94.203 69 4 0 2122 2190 216691507 216691575 6.360000e-19 106.0
11 TraesCS6A01G162900 chr6B 97.619 42 1 0 2438 2479 216691932 216691973 6.450000e-09 73.1
12 TraesCS6A01G162900 chr6D 96.452 1071 25 2 2766 3836 123058257 123059314 0.000000e+00 1755.0
13 TraesCS6A01G162900 chr6D 92.149 1210 52 19 325 1517 123055829 123057012 0.000000e+00 1668.0
14 TraesCS6A01G162900 chr6D 95.101 694 18 5 1513 2192 123057218 123057909 0.000000e+00 1079.0
15 TraesCS6A01G162900 chr6D 95.690 116 5 0 3824 3939 123115774 123115889 2.210000e-43 187.0
16 TraesCS6A01G162900 chr6D 97.115 104 3 0 2326 2429 123057923 123058026 4.780000e-40 176.0
17 TraesCS6A01G162900 chr6D 96.226 53 2 0 2423 2475 123058201 123058253 2.300000e-13 87.9
18 TraesCS6A01G162900 chr3A 93.976 332 12 2 1 324 36665351 36665682 3.230000e-136 496.0
19 TraesCS6A01G162900 chr3A 96.296 297 9 1 2474 2768 733909638 733909342 1.940000e-133 486.0
20 TraesCS6A01G162900 chr3A 96.296 297 9 1 2474 2768 733912733 733912437 1.940000e-133 486.0
21 TraesCS6A01G162900 chr3A 96.587 293 8 1 2478 2768 733914464 733914172 6.990000e-133 484.0
22 TraesCS6A01G162900 chr3A 96.271 295 7 2 2477 2767 698037291 698036997 9.040000e-132 481.0
23 TraesCS6A01G162900 chr3A 95.098 306 9 4 2478 2778 733978016 733978320 1.170000e-130 477.0
24 TraesCS6A01G162900 chr3A 91.813 342 20 3 1 334 730597947 730597606 1.960000e-128 470.0
25 TraesCS6A01G162900 chr3A 98.204 167 3 0 4462 4628 596765999 596766165 4.550000e-75 292.0
26 TraesCS6A01G162900 chr3A 96.067 178 6 1 4456 4632 217823198 217823375 5.880000e-74 289.0
27 TraesCS6A01G162900 chr3A 93.023 86 6 0 4355 4440 730597616 730597701 4.880000e-25 126.0
28 TraesCS6A01G162900 chr7A 95.395 304 11 3 2474 2775 36328898 36329200 9.040000e-132 481.0
29 TraesCS6A01G162900 chr7A 96.259 294 9 1 2477 2768 134024132 134023839 9.040000e-132 481.0
30 TraesCS6A01G162900 chr7A 95.531 179 6 2 4463 4640 50348601 50348424 7.610000e-73 285.0
31 TraesCS6A01G162900 chr7A 92.347 196 10 4 4440 4631 630046140 630046334 1.650000e-69 274.0
32 TraesCS6A01G162900 chr7A 88.000 125 13 2 1204 1327 164652603 164652480 3.750000e-31 147.0
33 TraesCS6A01G162900 chr1A 95.623 297 11 1 2478 2772 586266801 586267097 4.210000e-130 475.0
34 TraesCS6A01G162900 chr1A 91.411 326 17 3 8 325 345187785 345187463 1.990000e-118 436.0
35 TraesCS6A01G162900 chr1A 95.109 184 6 3 4460 4640 494815412 494815595 2.120000e-73 287.0
36 TraesCS6A01G162900 chr5B 91.592 333 20 2 1 325 505364592 505364924 1.970000e-123 453.0
37 TraesCS6A01G162900 chr5B 90.667 150 12 2 325 473 550767732 550767880 1.020000e-46 198.0
38 TraesCS6A01G162900 chr5B 89.535 86 9 0 4355 4440 505364923 505364838 4.920000e-20 110.0
39 TraesCS6A01G162900 chr4D 89.583 336 28 5 1 332 25387271 25387603 2.000000e-113 420.0
40 TraesCS6A01G162900 chr4D 89.697 330 24 4 9 330 51294328 51294001 3.350000e-111 412.0
41 TraesCS6A01G162900 chr4D 88.199 161 16 3 325 483 99209496 99209337 6.140000e-44 189.0
42 TraesCS6A01G162900 chr5D 89.759 332 25 3 1 323 227169011 227168680 2.590000e-112 416.0
43 TraesCS6A01G162900 chr5D 90.667 150 11 3 325 472 387660810 387660958 3.670000e-46 196.0
44 TraesCS6A01G162900 chr7D 89.458 332 26 3 1 324 449561478 449561808 1.200000e-110 411.0
45 TraesCS6A01G162900 chr7D 93.258 89 6 0 1240 1328 163359274 163359186 1.050000e-26 132.0
46 TraesCS6A01G162900 chr2A 97.661 171 4 0 4460 4630 53617118 53617288 1.260000e-75 294.0
47 TraesCS6A01G162900 chr2A 96.591 176 5 1 4460 4635 746687377 746687203 1.640000e-74 291.0
48 TraesCS6A01G162900 chr2A 90.604 149 12 2 325 472 778165126 778165273 3.670000e-46 196.0
49 TraesCS6A01G162900 chrUn 95.109 184 9 0 4448 4631 34167011 34166828 1.640000e-74 291.0
50 TraesCS6A01G162900 chr4B 96.045 177 6 1 4453 4629 143898157 143897982 2.120000e-73 287.0
51 TraesCS6A01G162900 chr4B 96.947 131 4 0 2197 2327 210282754 210282884 2.180000e-53 220.0
52 TraesCS6A01G162900 chr4B 96.269 134 5 0 2199 2332 294107573 294107706 2.180000e-53 220.0
53 TraesCS6A01G162900 chr4B 90.541 148 14 0 325 472 38635620 38635767 3.670000e-46 196.0
54 TraesCS6A01G162900 chr4A 95.714 140 5 1 2189 2327 513376021 513375882 1.680000e-54 224.0
55 TraesCS6A01G162900 chr4A 94.928 138 7 0 2190 2327 36799607 36799744 2.820000e-52 217.0
56 TraesCS6A01G162900 chr5A 97.674 129 3 0 2200 2328 519946665 519946793 6.050000e-54 222.0
57 TraesCS6A01G162900 chr5A 90.667 150 11 3 324 471 609231306 609231454 3.670000e-46 196.0
58 TraesCS6A01G162900 chr2B 96.970 132 4 0 2197 2328 171995396 171995527 6.050000e-54 222.0
59 TraesCS6A01G162900 chr2B 97.656 128 3 0 2201 2328 21749582 21749455 2.180000e-53 220.0
60 TraesCS6A01G162900 chr3B 94.928 138 7 0 2196 2333 45520746 45520883 2.820000e-52 217.0
61 TraesCS6A01G162900 chr1B 92.568 148 9 2 2181 2327 264767286 264767140 1.310000e-50 211.0
62 TraesCS6A01G162900 chr1B 88.272 162 16 3 325 485 592430659 592430500 1.710000e-44 191.0
63 TraesCS6A01G162900 chr1D 90.066 151 12 3 325 473 64894469 64894618 4.750000e-45 193.0
64 TraesCS6A01G162900 chr7B 88.095 126 13 2 1204 1328 125598691 125598567 1.040000e-31 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G162900 chr6A 158071809 158076455 4646 True 3932.500000 7275 100.0000 1 4647 2 chr6A.!!$R1 4646
1 TraesCS6A01G162900 chr6B 216688634 216693134 4500 False 621.762500 1930 93.8360 326 3939 8 chr6B.!!$F1 3613
2 TraesCS6A01G162900 chr6D 123055829 123059314 3485 False 953.180000 1755 95.4086 325 3836 5 chr6D.!!$F2 3511
3 TraesCS6A01G162900 chr3A 733909342 733914464 5122 True 485.333333 486 96.3930 2474 2768 3 chr3A.!!$R3 294

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 125 0.249699 ACCGATGAACAGTGCGAACA 60.250 50.0 0.00 0.0 0.0 3.18 F
335 336 0.900647 CCTCACTCGGTCCAACTCCT 60.901 60.0 0.00 0.0 0.0 3.69 F
688 1638 0.966920 ACAACGAGGACCACGAATCT 59.033 50.0 18.62 0.0 34.7 2.40 F
1068 2085 1.294659 CGGTGGCTGCTCTTCTGTTC 61.295 60.0 0.00 0.0 0.0 3.18 F
2216 3530 0.038744 AACTACTCCCTCCGTTCCGA 59.961 55.0 0.00 0.0 0.0 4.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1068 2085 2.631160 TACCGCCAAACATCCATAGG 57.369 50.000 0.00 0.00 0.00 2.57 R
2192 3506 0.178912 ACGGAGGGAGTAGTTGGGTT 60.179 55.000 0.00 0.00 0.00 4.11 R
2195 3509 0.535797 GGAACGGAGGGAGTAGTTGG 59.464 60.000 0.00 0.00 0.00 3.77 R
2903 9283 0.179062 GGATAGAGCTGGTGCACCTG 60.179 60.000 34.75 33.39 42.74 4.00 R
3884 10264 4.479786 AGTTCAAGAATCTAGTCTGGCC 57.520 45.455 0.00 0.00 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
104 105 5.620098 AAAAGACAAATCGCGTTTTTCAG 57.380 34.783 12.27 4.91 30.58 3.02
105 106 4.545823 AAGACAAATCGCGTTTTTCAGA 57.454 36.364 12.27 0.00 30.58 3.27
106 107 3.873529 AGACAAATCGCGTTTTTCAGAC 58.126 40.909 12.27 3.27 30.58 3.51
107 108 2.971261 GACAAATCGCGTTTTTCAGACC 59.029 45.455 12.27 0.00 0.00 3.85
108 109 1.969256 CAAATCGCGTTTTTCAGACCG 59.031 47.619 12.27 0.00 0.00 4.79
109 110 1.504359 AATCGCGTTTTTCAGACCGA 58.496 45.000 5.77 0.00 0.00 4.69
110 111 1.722011 ATCGCGTTTTTCAGACCGAT 58.278 45.000 5.77 0.00 0.00 4.18
111 112 0.787787 TCGCGTTTTTCAGACCGATG 59.212 50.000 5.77 0.00 0.00 3.84
112 113 0.787787 CGCGTTTTTCAGACCGATGA 59.212 50.000 0.00 0.00 0.00 2.92
113 114 1.193650 CGCGTTTTTCAGACCGATGAA 59.806 47.619 0.00 0.00 37.41 2.57
114 115 2.571206 GCGTTTTTCAGACCGATGAAC 58.429 47.619 0.00 0.00 38.87 3.18
115 116 2.032377 GCGTTTTTCAGACCGATGAACA 60.032 45.455 0.00 0.00 38.87 3.18
116 117 3.799035 CGTTTTTCAGACCGATGAACAG 58.201 45.455 0.00 0.00 38.87 3.16
117 118 3.247648 CGTTTTTCAGACCGATGAACAGT 59.752 43.478 0.00 0.00 38.87 3.55
118 119 4.527564 GTTTTTCAGACCGATGAACAGTG 58.472 43.478 0.00 0.00 38.87 3.66
119 120 1.795768 TTCAGACCGATGAACAGTGC 58.204 50.000 0.00 0.00 34.31 4.40
120 121 0.388520 TCAGACCGATGAACAGTGCG 60.389 55.000 0.00 0.00 0.00 5.34
121 122 0.388520 CAGACCGATGAACAGTGCGA 60.389 55.000 0.00 0.00 0.00 5.10
122 123 0.317160 AGACCGATGAACAGTGCGAA 59.683 50.000 0.00 0.00 0.00 4.70
123 124 0.438830 GACCGATGAACAGTGCGAAC 59.561 55.000 0.00 0.00 0.00 3.95
124 125 0.249699 ACCGATGAACAGTGCGAACA 60.250 50.000 0.00 0.00 0.00 3.18
138 139 5.191595 GTGCGAACACTGTTCACTATTAG 57.808 43.478 19.61 4.93 43.85 1.73
139 140 4.921515 GTGCGAACACTGTTCACTATTAGA 59.078 41.667 19.61 0.00 43.85 2.10
140 141 5.404366 GTGCGAACACTGTTCACTATTAGAA 59.596 40.000 19.61 0.00 43.85 2.10
141 142 5.404366 TGCGAACACTGTTCACTATTAGAAC 59.596 40.000 19.61 0.00 44.26 3.01
142 143 5.634020 GCGAACACTGTTCACTATTAGAACT 59.366 40.000 19.61 0.00 44.30 3.01
143 144 6.400091 GCGAACACTGTTCACTATTAGAACTG 60.400 42.308 19.61 10.17 44.30 3.16
144 145 6.089551 CGAACACTGTTCACTATTAGAACTGG 59.910 42.308 19.61 7.55 44.33 4.00
145 146 6.420913 ACACTGTTCACTATTAGAACTGGT 57.579 37.500 14.44 8.02 44.33 4.00
146 147 6.827727 ACACTGTTCACTATTAGAACTGGTT 58.172 36.000 14.44 0.00 44.33 3.67
147 148 7.280356 ACACTGTTCACTATTAGAACTGGTTT 58.720 34.615 14.44 3.26 44.33 3.27
148 149 7.773690 ACACTGTTCACTATTAGAACTGGTTTT 59.226 33.333 14.44 0.00 44.33 2.43
149 150 8.621286 CACTGTTCACTATTAGAACTGGTTTTT 58.379 33.333 14.44 0.00 44.33 1.94
150 151 8.837389 ACTGTTCACTATTAGAACTGGTTTTTC 58.163 33.333 14.44 0.00 44.33 2.29
151 152 8.974060 TGTTCACTATTAGAACTGGTTTTTCT 57.026 30.769 7.47 0.00 44.30 2.52
152 153 9.052759 TGTTCACTATTAGAACTGGTTTTTCTC 57.947 33.333 7.47 0.00 44.30 2.87
153 154 9.274206 GTTCACTATTAGAACTGGTTTTTCTCT 57.726 33.333 0.00 0.00 41.56 3.10
154 155 9.847224 TTCACTATTAGAACTGGTTTTTCTCTT 57.153 29.630 0.00 0.00 34.99 2.85
155 156 9.847224 TCACTATTAGAACTGGTTTTTCTCTTT 57.153 29.630 0.00 0.00 34.99 2.52
178 179 6.741992 TTTTGTGTAGCTCTCACCATAATG 57.258 37.500 15.99 0.00 35.25 1.90
179 180 5.420725 TTGTGTAGCTCTCACCATAATGT 57.579 39.130 15.99 0.00 35.25 2.71
180 181 6.538945 TTGTGTAGCTCTCACCATAATGTA 57.461 37.500 15.99 0.00 35.25 2.29
181 182 6.731292 TGTGTAGCTCTCACCATAATGTAT 57.269 37.500 15.99 0.00 35.25 2.29
182 183 7.124573 TGTGTAGCTCTCACCATAATGTATT 57.875 36.000 15.99 0.00 35.25 1.89
183 184 7.564793 TGTGTAGCTCTCACCATAATGTATTT 58.435 34.615 15.99 0.00 35.25 1.40
184 185 7.710907 TGTGTAGCTCTCACCATAATGTATTTC 59.289 37.037 15.99 0.00 35.25 2.17
185 186 6.923508 TGTAGCTCTCACCATAATGTATTTCG 59.076 38.462 0.00 0.00 0.00 3.46
186 187 5.918608 AGCTCTCACCATAATGTATTTCGT 58.081 37.500 0.00 0.00 0.00 3.85
187 188 6.349300 AGCTCTCACCATAATGTATTTCGTT 58.651 36.000 0.00 0.00 0.00 3.85
188 189 6.258727 AGCTCTCACCATAATGTATTTCGTTG 59.741 38.462 0.00 0.00 0.00 4.10
189 190 6.037172 GCTCTCACCATAATGTATTTCGTTGT 59.963 38.462 0.00 0.00 0.00 3.32
190 191 7.534085 TCTCACCATAATGTATTTCGTTGTC 57.466 36.000 0.00 0.00 0.00 3.18
191 192 7.100409 TCTCACCATAATGTATTTCGTTGTCA 58.900 34.615 0.00 0.00 0.00 3.58
192 193 7.277760 TCTCACCATAATGTATTTCGTTGTCAG 59.722 37.037 0.00 0.00 0.00 3.51
193 194 7.100409 TCACCATAATGTATTTCGTTGTCAGA 58.900 34.615 0.00 0.00 0.00 3.27
194 195 7.768582 TCACCATAATGTATTTCGTTGTCAGAT 59.231 33.333 0.00 0.00 0.00 2.90
195 196 8.397906 CACCATAATGTATTTCGTTGTCAGATT 58.602 33.333 0.00 0.00 0.00 2.40
196 197 8.956426 ACCATAATGTATTTCGTTGTCAGATTT 58.044 29.630 0.00 0.00 0.00 2.17
197 198 9.787532 CCATAATGTATTTCGTTGTCAGATTTT 57.212 29.630 0.00 0.00 0.00 1.82
206 207 9.773328 ATTTCGTTGTCAGATTTTATACACATG 57.227 29.630 0.00 0.00 0.00 3.21
207 208 7.899178 TCGTTGTCAGATTTTATACACATGT 57.101 32.000 0.00 0.00 0.00 3.21
208 209 8.989653 TCGTTGTCAGATTTTATACACATGTA 57.010 30.769 0.00 0.00 34.67 2.29
209 210 9.425577 TCGTTGTCAGATTTTATACACATGTAA 57.574 29.630 0.00 0.00 33.76 2.41
297 298 9.452287 AATTTTTCAAAATAACCATCTCCATGG 57.548 29.630 4.97 4.97 44.83 3.66
298 299 8.824783 ATTTTTCAAAATAACCATCTCCATGGA 58.175 29.630 15.27 15.27 43.04 3.41
304 305 4.766970 CATCTCCATGGAGGTCGC 57.233 61.111 35.95 0.00 42.20 5.19
305 306 1.070445 CATCTCCATGGAGGTCGCC 59.930 63.158 35.95 0.00 42.20 5.54
306 307 2.143419 ATCTCCATGGAGGTCGCCC 61.143 63.158 35.95 0.00 42.20 6.13
307 308 4.227134 CTCCATGGAGGTCGCCCG 62.227 72.222 31.14 6.42 38.51 6.13
309 310 4.530857 CCATGGAGGTCGCCCGTC 62.531 72.222 5.56 0.00 35.12 4.79
310 311 3.770040 CATGGAGGTCGCCCGTCA 61.770 66.667 0.00 0.00 35.12 4.35
311 312 3.000819 ATGGAGGTCGCCCGTCAA 61.001 61.111 0.00 0.00 35.12 3.18
312 313 2.589157 ATGGAGGTCGCCCGTCAAA 61.589 57.895 0.00 0.00 35.12 2.69
313 314 2.031465 GGAGGTCGCCCGTCAAAA 59.969 61.111 0.00 0.00 35.12 2.44
314 315 2.033194 GGAGGTCGCCCGTCAAAAG 61.033 63.158 0.00 0.00 35.12 2.27
315 316 2.668550 AGGTCGCCCGTCAAAAGC 60.669 61.111 0.00 0.00 35.12 3.51
316 317 3.733960 GGTCGCCCGTCAAAAGCC 61.734 66.667 0.00 0.00 0.00 4.35
317 318 3.733960 GTCGCCCGTCAAAAGCCC 61.734 66.667 0.00 0.00 0.00 5.19
318 319 3.948719 TCGCCCGTCAAAAGCCCT 61.949 61.111 0.00 0.00 0.00 5.19
319 320 3.431725 CGCCCGTCAAAAGCCCTC 61.432 66.667 0.00 0.00 0.00 4.30
320 321 2.282180 GCCCGTCAAAAGCCCTCA 60.282 61.111 0.00 0.00 0.00 3.86
321 322 2.626780 GCCCGTCAAAAGCCCTCAC 61.627 63.158 0.00 0.00 0.00 3.51
322 323 1.073199 CCCGTCAAAAGCCCTCACT 59.927 57.895 0.00 0.00 0.00 3.41
323 324 0.955919 CCCGTCAAAAGCCCTCACTC 60.956 60.000 0.00 0.00 0.00 3.51
335 336 0.900647 CCTCACTCGGTCCAACTCCT 60.901 60.000 0.00 0.00 0.00 3.69
346 347 4.159879 CGGTCCAACTCCTATCAAACTAGT 59.840 45.833 0.00 0.00 0.00 2.57
379 380 8.194769 GGACTAAATTTTTGTTTCACCTCTTGA 58.805 33.333 0.00 0.00 0.00 3.02
409 410 3.134127 GGCTGCGTGGGCCTTTAG 61.134 66.667 4.53 0.00 45.57 1.85
410 411 2.359975 GCTGCGTGGGCCTTTAGT 60.360 61.111 4.53 0.00 38.85 2.24
442 443 6.248433 AGGAATTTCTGAAACTGCTATTGGA 58.752 36.000 3.77 0.00 0.00 3.53
444 445 5.904362 ATTTCTGAAACTGCTATTGGACC 57.096 39.130 4.73 0.00 0.00 4.46
633 1581 3.445096 ACCTGCTGGTAATTCAAGATTGC 59.555 43.478 14.47 0.00 46.43 3.56
647 1597 3.710209 AGATTGCTGCCTACTGAAACT 57.290 42.857 0.00 0.00 0.00 2.66
683 1633 1.157870 AAGCAACAACGAGGACCACG 61.158 55.000 9.97 9.97 0.00 4.94
685 1635 1.155424 GCAACAACGAGGACCACGAA 61.155 55.000 18.62 0.00 34.70 3.85
686 1636 1.508632 CAACAACGAGGACCACGAAT 58.491 50.000 18.62 3.56 34.70 3.34
687 1637 1.459592 CAACAACGAGGACCACGAATC 59.540 52.381 18.62 0.00 34.70 2.52
688 1638 0.966920 ACAACGAGGACCACGAATCT 59.033 50.000 18.62 0.00 34.70 2.40
733 1686 2.357637 ACCGCATTTGCACCATATACAC 59.642 45.455 3.13 0.00 42.21 2.90
734 1687 2.357323 CCGCATTTGCACCATATACACA 59.643 45.455 3.13 0.00 42.21 3.72
735 1688 3.181492 CCGCATTTGCACCATATACACAA 60.181 43.478 3.13 0.00 42.21 3.33
736 1689 3.790820 CGCATTTGCACCATATACACAAC 59.209 43.478 3.13 0.00 42.21 3.32
737 1690 4.673841 CGCATTTGCACCATATACACAACA 60.674 41.667 3.13 0.00 42.21 3.33
748 1755 7.593273 CACCATATACACAACAAAAACGTCAAT 59.407 33.333 0.00 0.00 0.00 2.57
814 1821 7.741027 ATCATAAATGCACCAGAGACTAATG 57.259 36.000 0.00 0.00 0.00 1.90
915 1922 4.103311 ACCTTTCATATGTAGCTCTTCCCC 59.897 45.833 1.90 0.00 0.00 4.81
962 1979 2.047844 CTCAGTCACACGGCCAGG 60.048 66.667 2.24 0.00 0.00 4.45
1068 2085 1.294659 CGGTGGCTGCTCTTCTGTTC 61.295 60.000 0.00 0.00 0.00 3.18
1115 2132 3.009723 GCTACATGCTGCAGTTTCCTAA 58.990 45.455 16.64 0.00 38.95 2.69
1119 2136 5.473066 ACATGCTGCAGTTTCCTAAATTT 57.527 34.783 16.64 0.00 0.00 1.82
1182 2201 6.696825 ATTTCTCACTTACGCATATCATCG 57.303 37.500 0.00 0.00 0.00 3.84
1192 2211 3.429881 ACGCATATCATCGCTATTGTGTG 59.570 43.478 0.00 0.00 0.00 3.82
1193 2212 3.429881 CGCATATCATCGCTATTGTGTGT 59.570 43.478 0.00 0.00 0.00 3.72
1301 2320 4.024048 CGTAACAAGGATGGCATCATTACC 60.024 45.833 24.97 10.36 31.28 2.85
1396 2415 4.414852 ACAAATCGCACATATCTGCAAAC 58.585 39.130 3.78 0.00 36.94 2.93
1400 2419 2.931969 TCGCACATATCTGCAAACTGAG 59.068 45.455 3.78 0.00 36.94 3.35
1477 2496 6.986904 GCCTTAGCTACAGAGTACAAATTT 57.013 37.500 0.00 0.00 35.50 1.82
1643 2873 3.181501 TGTTCAACTTTTCTTCGTGCTGG 60.182 43.478 0.00 0.00 0.00 4.85
1647 2877 4.034742 TCAACTTTTCTTCGTGCTGGTTAC 59.965 41.667 0.00 0.00 0.00 2.50
1651 2881 4.481930 TTTCTTCGTGCTGGTTACATTG 57.518 40.909 0.00 0.00 0.00 2.82
1660 2890 5.121611 CGTGCTGGTTACATTGAACTGAATA 59.878 40.000 0.00 0.00 0.00 1.75
1688 2918 6.432403 TGACATTATATCCATACCACTGCA 57.568 37.500 0.00 0.00 0.00 4.41
2196 3510 9.597170 GTTACTATATAGCTATTTGGCTAACCC 57.403 37.037 12.39 0.00 46.06 4.11
2206 3520 1.282382 TGGCTAACCCAACTACTCCC 58.718 55.000 0.00 0.00 41.82 4.30
2207 3521 1.203389 TGGCTAACCCAACTACTCCCT 60.203 52.381 0.00 0.00 41.82 4.20
2208 3522 1.485480 GGCTAACCCAACTACTCCCTC 59.515 57.143 0.00 0.00 0.00 4.30
2209 3523 1.485480 GCTAACCCAACTACTCCCTCC 59.515 57.143 0.00 0.00 0.00 4.30
2210 3524 1.755380 CTAACCCAACTACTCCCTCCG 59.245 57.143 0.00 0.00 0.00 4.63
2211 3525 0.178912 AACCCAACTACTCCCTCCGT 60.179 55.000 0.00 0.00 0.00 4.69
2212 3526 0.178912 ACCCAACTACTCCCTCCGTT 60.179 55.000 0.00 0.00 0.00 4.44
2213 3527 0.535797 CCCAACTACTCCCTCCGTTC 59.464 60.000 0.00 0.00 0.00 3.95
2214 3528 0.535797 CCAACTACTCCCTCCGTTCC 59.464 60.000 0.00 0.00 0.00 3.62
2215 3529 0.172803 CAACTACTCCCTCCGTTCCG 59.827 60.000 0.00 0.00 0.00 4.30
2216 3530 0.038744 AACTACTCCCTCCGTTCCGA 59.961 55.000 0.00 0.00 0.00 4.55
2217 3531 0.038744 ACTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
2218 3532 1.341778 ACTACTCCCTCCGTTCCGAAT 60.342 52.381 0.00 0.00 0.00 3.34
2219 3533 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
2220 3534 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
2221 3535 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
2222 3536 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
2223 3537 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
2224 3538 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2225 3539 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2226 3540 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2227 3541 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
2228 3542 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
2229 3543 5.389859 TCCGTTCCGAATTACTTGTCTTA 57.610 39.130 0.00 0.00 0.00 2.10
2230 3544 5.404946 TCCGTTCCGAATTACTTGTCTTAG 58.595 41.667 0.00 0.00 0.00 2.18
2231 3545 5.183713 TCCGTTCCGAATTACTTGTCTTAGA 59.816 40.000 0.00 0.00 0.00 2.10
2232 3546 5.515626 CCGTTCCGAATTACTTGTCTTAGAG 59.484 44.000 0.00 0.00 0.00 2.43
2233 3547 6.091437 CGTTCCGAATTACTTGTCTTAGAGT 58.909 40.000 0.00 0.00 0.00 3.24
2234 3548 6.585322 CGTTCCGAATTACTTGTCTTAGAGTT 59.415 38.462 0.00 0.00 0.00 3.01
2235 3549 7.410513 CGTTCCGAATTACTTGTCTTAGAGTTG 60.411 40.741 0.00 0.00 0.00 3.16
2236 3550 6.989659 TCCGAATTACTTGTCTTAGAGTTGT 58.010 36.000 0.00 0.00 0.00 3.32
2237 3551 7.088905 TCCGAATTACTTGTCTTAGAGTTGTC 58.911 38.462 0.00 0.00 0.00 3.18
2238 3552 7.039923 TCCGAATTACTTGTCTTAGAGTTGTCT 60.040 37.037 0.00 0.00 36.75 3.41
2239 3553 8.242053 CCGAATTACTTGTCTTAGAGTTGTCTA 58.758 37.037 0.00 0.00 33.84 2.59
2240 3554 9.279904 CGAATTACTTGTCTTAGAGTTGTCTAG 57.720 37.037 0.00 0.00 36.61 2.43
2246 3560 8.908903 ACTTGTCTTAGAGTTGTCTAGATATGG 58.091 37.037 0.00 0.00 36.61 2.74
2247 3561 9.126151 CTTGTCTTAGAGTTGTCTAGATATGGA 57.874 37.037 0.00 0.00 36.61 3.41
2248 3562 8.684386 TGTCTTAGAGTTGTCTAGATATGGAG 57.316 38.462 0.00 0.00 36.61 3.86
2249 3563 7.721842 TGTCTTAGAGTTGTCTAGATATGGAGG 59.278 40.741 0.00 0.00 36.61 4.30
2250 3564 7.722285 GTCTTAGAGTTGTCTAGATATGGAGGT 59.278 40.741 0.00 0.00 36.61 3.85
2251 3565 8.946248 TCTTAGAGTTGTCTAGATATGGAGGTA 58.054 37.037 0.00 0.00 36.61 3.08
2252 3566 9.747898 CTTAGAGTTGTCTAGATATGGAGGTAT 57.252 37.037 0.00 0.00 36.61 2.73
2253 3567 9.742144 TTAGAGTTGTCTAGATATGGAGGTATC 57.258 37.037 0.00 0.00 36.61 2.24
2254 3568 7.995663 AGAGTTGTCTAGATATGGAGGTATCT 58.004 38.462 0.00 2.43 42.50 1.98
2255 3569 9.118367 AGAGTTGTCTAGATATGGAGGTATCTA 57.882 37.037 0.00 4.21 40.79 1.98
2263 3577 9.688091 CTAGATATGGAGGTATCTAGCACTAAA 57.312 37.037 14.51 0.00 46.54 1.85
2264 3578 8.958060 AGATATGGAGGTATCTAGCACTAAAA 57.042 34.615 0.00 0.00 39.13 1.52
2265 3579 9.554053 AGATATGGAGGTATCTAGCACTAAAAT 57.446 33.333 0.00 0.00 39.13 1.82
2266 3580 9.593134 GATATGGAGGTATCTAGCACTAAAATG 57.407 37.037 0.00 0.00 0.00 2.32
2267 3581 7.618019 ATGGAGGTATCTAGCACTAAAATGA 57.382 36.000 0.00 0.00 0.00 2.57
2268 3582 7.055667 TGGAGGTATCTAGCACTAAAATGAG 57.944 40.000 0.00 0.00 0.00 2.90
2269 3583 6.611642 TGGAGGTATCTAGCACTAAAATGAGT 59.388 38.462 0.00 0.00 0.00 3.41
2270 3584 7.149307 GGAGGTATCTAGCACTAAAATGAGTC 58.851 42.308 0.00 0.00 0.00 3.36
2271 3585 7.014808 GGAGGTATCTAGCACTAAAATGAGTCT 59.985 40.741 0.00 0.00 0.00 3.24
2272 3586 8.998277 AGGTATCTAGCACTAAAATGAGTCTA 57.002 34.615 0.00 0.00 0.00 2.59
2273 3587 9.073475 AGGTATCTAGCACTAAAATGAGTCTAG 57.927 37.037 0.00 0.00 33.29 2.43
2274 3588 9.069082 GGTATCTAGCACTAAAATGAGTCTAGA 57.931 37.037 11.59 11.59 38.76 2.43
2278 3592 9.628500 TCTAGCACTAAAATGAGTCTAGATACA 57.372 33.333 0.00 0.00 34.65 2.29
2281 3595 8.364142 AGCACTAAAATGAGTCTAGATACATCC 58.636 37.037 12.66 0.00 0.00 3.51
2282 3596 7.327275 GCACTAAAATGAGTCTAGATACATCCG 59.673 40.741 12.66 6.68 0.00 4.18
2283 3597 8.353684 CACTAAAATGAGTCTAGATACATCCGT 58.646 37.037 12.66 7.10 0.00 4.69
2284 3598 9.570468 ACTAAAATGAGTCTAGATACATCCGTA 57.430 33.333 12.66 6.93 0.00 4.02
2298 3612 5.607939 ACATCCGTATCTACACAAATCCA 57.392 39.130 0.00 0.00 0.00 3.41
2299 3613 5.984725 ACATCCGTATCTACACAAATCCAA 58.015 37.500 0.00 0.00 0.00 3.53
2300 3614 6.049149 ACATCCGTATCTACACAAATCCAAG 58.951 40.000 0.00 0.00 0.00 3.61
2301 3615 5.925506 TCCGTATCTACACAAATCCAAGA 57.074 39.130 0.00 0.00 0.00 3.02
2302 3616 5.657474 TCCGTATCTACACAAATCCAAGAC 58.343 41.667 0.00 0.00 0.00 3.01
2303 3617 5.186215 TCCGTATCTACACAAATCCAAGACA 59.814 40.000 0.00 0.00 0.00 3.41
2304 3618 5.872617 CCGTATCTACACAAATCCAAGACAA 59.127 40.000 0.00 0.00 0.00 3.18
2305 3619 6.036083 CCGTATCTACACAAATCCAAGACAAG 59.964 42.308 0.00 0.00 0.00 3.16
2306 3620 6.590292 CGTATCTACACAAATCCAAGACAAGT 59.410 38.462 0.00 0.00 0.00 3.16
2307 3621 7.758076 CGTATCTACACAAATCCAAGACAAGTA 59.242 37.037 0.00 0.00 0.00 2.24
2308 3622 9.431887 GTATCTACACAAATCCAAGACAAGTAA 57.568 33.333 0.00 0.00 0.00 2.24
2310 3624 8.918202 TCTACACAAATCCAAGACAAGTAATT 57.082 30.769 0.00 0.00 0.00 1.40
2311 3625 8.999431 TCTACACAAATCCAAGACAAGTAATTC 58.001 33.333 0.00 0.00 0.00 2.17
2312 3626 6.668323 ACACAAATCCAAGACAAGTAATTCG 58.332 36.000 0.00 0.00 0.00 3.34
2313 3627 6.086222 CACAAATCCAAGACAAGTAATTCGG 58.914 40.000 0.00 0.00 0.00 4.30
2314 3628 6.001460 ACAAATCCAAGACAAGTAATTCGGA 58.999 36.000 0.00 0.00 0.00 4.55
2315 3629 6.488683 ACAAATCCAAGACAAGTAATTCGGAA 59.511 34.615 0.00 0.00 0.00 4.30
2316 3630 6.496338 AATCCAAGACAAGTAATTCGGAAC 57.504 37.500 0.00 0.00 0.00 3.62
2402 3769 7.744715 GGTTTTGTTGTGAAATAGTCTACGATG 59.255 37.037 0.00 0.00 0.00 3.84
2562 4110 6.628919 TCTCATCATTCAACATGCATAAGG 57.371 37.500 0.00 0.00 0.00 2.69
2566 4114 8.014070 TCATCATTCAACATGCATAAGGAAAT 57.986 30.769 0.00 0.00 0.00 2.17
2702 4250 8.859090 ACTATTGTTTCAAGAATTCATGTTCCA 58.141 29.630 8.44 2.12 0.00 3.53
2771 9151 4.821805 CGTGGGGCATCATCTAGTTTTATT 59.178 41.667 0.00 0.00 0.00 1.40
2798 9178 3.509967 TGTGCATCCACGGGTATATAGAG 59.490 47.826 0.00 0.00 45.04 2.43
2903 9283 2.890945 ACCAGTTTTATGCTGAACACCC 59.109 45.455 0.00 0.00 36.12 4.61
3102 9482 7.100829 TCGTATATATGCTAGTTTTTGTGCG 57.899 36.000 0.00 0.00 0.00 5.34
3113 9493 6.905609 GCTAGTTTTTGTGCGTATTTCTATCC 59.094 38.462 0.00 0.00 0.00 2.59
3228 9608 5.653769 CCAGATGGTTTGACATATTTGGAGT 59.346 40.000 0.00 0.00 32.78 3.85
3289 9669 5.719085 ACCCTGCATCATGGTAATTTGTTAA 59.281 36.000 0.00 0.00 30.89 2.01
3311 9691 5.818136 AATATGCATGCCGTGGTTATATC 57.182 39.130 16.68 0.00 0.00 1.63
3533 9913 1.202557 GGGGCGGAATATACAACGTCA 60.203 52.381 0.00 0.00 31.70 4.35
3908 10288 5.123027 GGCCAGACTAGATTCTTGAACTTTG 59.877 44.000 0.00 0.00 0.00 2.77
3912 10292 8.877779 CCAGACTAGATTCTTGAACTTTGTATG 58.122 37.037 0.00 0.00 0.00 2.39
4351 10731 6.951062 TGAGATCTAGTAGATGGAGTTGTG 57.049 41.667 17.52 0.00 34.53 3.33
4352 10732 5.300539 TGAGATCTAGTAGATGGAGTTGTGC 59.699 44.000 17.52 0.00 34.53 4.57
4353 10733 5.204292 AGATCTAGTAGATGGAGTTGTGCA 58.796 41.667 17.52 0.00 34.53 4.57
4354 10734 4.991153 TCTAGTAGATGGAGTTGTGCAG 57.009 45.455 0.00 0.00 0.00 4.41
4355 10735 4.600062 TCTAGTAGATGGAGTTGTGCAGA 58.400 43.478 0.00 0.00 0.00 4.26
4356 10736 3.883830 AGTAGATGGAGTTGTGCAGAG 57.116 47.619 0.00 0.00 0.00 3.35
4357 10737 3.169099 AGTAGATGGAGTTGTGCAGAGT 58.831 45.455 0.00 0.00 0.00 3.24
4358 10738 2.469274 AGATGGAGTTGTGCAGAGTG 57.531 50.000 0.00 0.00 0.00 3.51
4359 10739 1.973515 AGATGGAGTTGTGCAGAGTGA 59.026 47.619 0.00 0.00 0.00 3.41
4360 10740 2.028294 AGATGGAGTTGTGCAGAGTGAG 60.028 50.000 0.00 0.00 0.00 3.51
4361 10741 0.394192 TGGAGTTGTGCAGAGTGAGG 59.606 55.000 0.00 0.00 0.00 3.86
4362 10742 0.321122 GGAGTTGTGCAGAGTGAGGG 60.321 60.000 0.00 0.00 0.00 4.30
4363 10743 0.952984 GAGTTGTGCAGAGTGAGGGC 60.953 60.000 0.00 0.00 0.00 5.19
4364 10744 1.072159 GTTGTGCAGAGTGAGGGCT 59.928 57.895 0.00 0.00 0.00 5.19
4365 10745 0.536006 GTTGTGCAGAGTGAGGGCTT 60.536 55.000 0.00 0.00 0.00 4.35
4366 10746 0.183492 TTGTGCAGAGTGAGGGCTTT 59.817 50.000 0.00 0.00 0.00 3.51
4367 10747 0.183492 TGTGCAGAGTGAGGGCTTTT 59.817 50.000 0.00 0.00 0.00 2.27
4368 10748 0.595095 GTGCAGAGTGAGGGCTTTTG 59.405 55.000 0.00 0.00 0.00 2.44
4369 10749 0.538057 TGCAGAGTGAGGGCTTTTGG 60.538 55.000 0.00 0.00 0.00 3.28
4370 10750 1.871126 GCAGAGTGAGGGCTTTTGGC 61.871 60.000 0.00 0.00 45.19 4.52
4402 10782 7.938140 CTCTATGGAGGTGGTTATTTTGAAA 57.062 36.000 0.00 0.00 36.03 2.69
4403 10783 8.348285 CTCTATGGAGGTGGTTATTTTGAAAA 57.652 34.615 0.00 0.00 36.03 2.29
4404 10784 8.713708 TCTATGGAGGTGGTTATTTTGAAAAA 57.286 30.769 0.00 0.00 0.00 1.94
4405 10785 9.320295 TCTATGGAGGTGGTTATTTTGAAAAAT 57.680 29.630 6.29 6.29 41.24 1.82
4406 10786 9.942850 CTATGGAGGTGGTTATTTTGAAAAATT 57.057 29.630 6.34 0.00 39.24 1.82
4407 10787 8.846943 ATGGAGGTGGTTATTTTGAAAAATTC 57.153 30.769 6.34 1.88 39.24 2.17
4408 10788 7.796054 TGGAGGTGGTTATTTTGAAAAATTCA 58.204 30.769 6.34 1.90 39.24 2.57
4466 10846 9.935241 ACATGTTCATATGGATGTATTCTACTC 57.065 33.333 2.13 0.00 34.41 2.59
4467 10847 9.376075 CATGTTCATATGGATGTATTCTACTCC 57.624 37.037 2.13 0.00 34.41 3.85
4468 10848 7.907389 TGTTCATATGGATGTATTCTACTCCC 58.093 38.462 2.13 0.00 34.41 4.30
4469 10849 7.734865 TGTTCATATGGATGTATTCTACTCCCT 59.265 37.037 2.13 0.00 34.41 4.20
4470 10850 7.962995 TCATATGGATGTATTCTACTCCCTC 57.037 40.000 2.13 0.00 34.41 4.30
4471 10851 6.897966 TCATATGGATGTATTCTACTCCCTCC 59.102 42.308 2.13 0.00 34.41 4.30
4472 10852 3.497332 TGGATGTATTCTACTCCCTCCG 58.503 50.000 0.00 0.00 0.00 4.63
4473 10853 3.117246 TGGATGTATTCTACTCCCTCCGT 60.117 47.826 0.00 0.00 0.00 4.69
4474 10854 3.896272 GGATGTATTCTACTCCCTCCGTT 59.104 47.826 0.00 0.00 0.00 4.44
4475 10855 4.022155 GGATGTATTCTACTCCCTCCGTTC 60.022 50.000 0.00 0.00 0.00 3.95
4476 10856 3.294214 TGTATTCTACTCCCTCCGTTCC 58.706 50.000 0.00 0.00 0.00 3.62
4477 10857 2.850695 ATTCTACTCCCTCCGTTCCT 57.149 50.000 0.00 0.00 0.00 3.36
4478 10858 3.967467 ATTCTACTCCCTCCGTTCCTA 57.033 47.619 0.00 0.00 0.00 2.94
4479 10859 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
4480 10860 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
4481 10861 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
4482 10862 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
4483 10863 5.136105 TCTACTCCCTCCGTTCCTAAATAC 58.864 45.833 0.00 0.00 0.00 1.89
4484 10864 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
4485 10865 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
4486 10866 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
4487 10867 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
4488 10868 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
4489 10869 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
4490 10870 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
4491 10871 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
4492 10872 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
4493 10873 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
4494 10874 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
4495 10875 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
4496 10876 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
4497 10877 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
4498 10878 7.490657 TCCTAAATACTTGTCTTTCTAGGCA 57.509 36.000 0.00 0.00 33.22 4.75
4499 10879 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
4500 10880 8.548877 TCCTAAATACTTGTCTTTCTAGGCATT 58.451 33.333 0.00 0.00 35.56 3.56
4501 10881 9.178758 CCTAAATACTTGTCTTTCTAGGCATTT 57.821 33.333 0.00 0.00 35.56 2.32
4503 10883 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
4504 10884 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
4505 10885 6.319141 ACTTGTCTTTCTAGGCATTTCAAC 57.681 37.500 0.00 0.00 35.56 3.18
4506 10886 5.827797 ACTTGTCTTTCTAGGCATTTCAACA 59.172 36.000 0.00 0.00 35.56 3.33
4507 10887 6.321181 ACTTGTCTTTCTAGGCATTTCAACAA 59.679 34.615 0.00 0.00 35.56 2.83
4508 10888 6.707440 TGTCTTTCTAGGCATTTCAACAAA 57.293 33.333 0.00 0.00 29.10 2.83
4509 10889 7.288810 TGTCTTTCTAGGCATTTCAACAAAT 57.711 32.000 0.00 0.00 29.10 2.32
4522 10902 7.915293 ATTTCAACAAATGACTACATACGGA 57.085 32.000 0.00 0.00 37.92 4.69
4523 10903 6.961359 TTCAACAAATGACTACATACGGAG 57.039 37.500 0.00 0.00 37.92 4.63
4524 10904 4.868171 TCAACAAATGACTACATACGGAGC 59.132 41.667 0.00 0.00 35.50 4.70
4525 10905 4.465632 ACAAATGACTACATACGGAGCA 57.534 40.909 0.00 0.00 35.50 4.26
4526 10906 4.827692 ACAAATGACTACATACGGAGCAA 58.172 39.130 0.00 0.00 35.50 3.91
4527 10907 5.242434 ACAAATGACTACATACGGAGCAAA 58.758 37.500 0.00 0.00 35.50 3.68
4528 10908 5.703592 ACAAATGACTACATACGGAGCAAAA 59.296 36.000 0.00 0.00 35.50 2.44
4529 10909 6.374333 ACAAATGACTACATACGGAGCAAAAT 59.626 34.615 0.00 0.00 35.50 1.82
4530 10910 5.991328 ATGACTACATACGGAGCAAAATG 57.009 39.130 0.00 0.00 34.71 2.32
4531 10911 5.079689 TGACTACATACGGAGCAAAATGA 57.920 39.130 0.00 0.00 0.00 2.57
4532 10912 5.109210 TGACTACATACGGAGCAAAATGAG 58.891 41.667 0.00 0.00 0.00 2.90
4533 10913 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
4534 10914 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
4535 10915 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
4536 10916 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
4537 10917 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
4538 10918 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
4539 10919 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
4540 10920 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
4541 10921 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
4542 10922 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
4543 10923 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
4563 10943 9.967346 TCTACACTCTAAAATATGTCTACATGC 57.033 33.333 5.85 0.00 37.15 4.06
4564 10944 9.750125 CTACACTCTAAAATATGTCTACATGCA 57.250 33.333 5.85 0.00 37.15 3.96
4566 10946 9.265901 ACACTCTAAAATATGTCTACATGCATC 57.734 33.333 0.00 0.00 37.15 3.91
4567 10947 8.715998 CACTCTAAAATATGTCTACATGCATCC 58.284 37.037 0.00 0.00 37.15 3.51
4568 10948 7.600375 ACTCTAAAATATGTCTACATGCATCCG 59.400 37.037 0.00 0.00 37.15 4.18
4569 10949 5.362556 AAAATATGTCTACATGCATCCGC 57.637 39.130 0.00 0.00 37.15 5.54
4581 10961 3.467374 TGCATCCGCATGTAATAGTCA 57.533 42.857 0.00 0.00 45.36 3.41
4582 10962 4.006780 TGCATCCGCATGTAATAGTCAT 57.993 40.909 0.00 0.00 45.36 3.06
4583 10963 4.388485 TGCATCCGCATGTAATAGTCATT 58.612 39.130 0.00 0.00 45.36 2.57
4584 10964 4.821260 TGCATCCGCATGTAATAGTCATTT 59.179 37.500 0.00 0.00 45.36 2.32
4585 10965 5.149273 GCATCCGCATGTAATAGTCATTTG 58.851 41.667 0.00 0.00 38.36 2.32
4586 10966 5.049474 GCATCCGCATGTAATAGTCATTTGA 60.049 40.000 0.00 0.00 38.36 2.69
4587 10967 6.513230 GCATCCGCATGTAATAGTCATTTGAA 60.513 38.462 0.00 0.00 38.36 2.69
4588 10968 6.993786 TCCGCATGTAATAGTCATTTGAAA 57.006 33.333 0.00 0.00 0.00 2.69
4589 10969 7.566760 TCCGCATGTAATAGTCATTTGAAAT 57.433 32.000 0.00 0.00 0.00 2.17
4590 10970 7.416817 TCCGCATGTAATAGTCATTTGAAATG 58.583 34.615 11.54 11.54 0.00 2.32
4591 10971 7.066887 TCCGCATGTAATAGTCATTTGAAATGT 59.933 33.333 16.62 2.38 0.00 2.71
4592 10972 7.376866 CCGCATGTAATAGTCATTTGAAATGTC 59.623 37.037 16.62 11.74 0.00 3.06
4593 10973 8.124823 CGCATGTAATAGTCATTTGAAATGTCT 58.875 33.333 18.62 18.62 0.00 3.41
4617 10997 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4618 10998 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4619 10999 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
4620 11000 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
4621 11001 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4622 11002 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4623 11003 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4624 11004 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
4625 11005 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
4626 11006 6.416631 AATATTTAGGAACGGAGGGAGTAC 57.583 41.667 0.00 0.00 0.00 2.73
4627 11007 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
4628 11008 3.393426 TTAGGAACGGAGGGAGTACAT 57.607 47.619 0.00 0.00 0.00 2.29
4629 11009 1.486211 AGGAACGGAGGGAGTACATG 58.514 55.000 0.00 0.00 0.00 3.21
4630 11010 1.192428 GGAACGGAGGGAGTACATGT 58.808 55.000 2.69 2.69 0.00 3.21
4631 11011 1.134788 GGAACGGAGGGAGTACATGTG 60.135 57.143 9.11 0.00 0.00 3.21
4632 11012 1.549170 GAACGGAGGGAGTACATGTGT 59.451 52.381 9.11 0.00 0.00 3.72
4633 11013 2.519771 ACGGAGGGAGTACATGTGTA 57.480 50.000 9.11 0.00 0.00 2.90
4634 11014 3.028094 ACGGAGGGAGTACATGTGTAT 57.972 47.619 9.11 0.00 32.54 2.29
4635 11015 4.174704 ACGGAGGGAGTACATGTGTATA 57.825 45.455 9.11 0.00 32.54 1.47
4636 11016 4.539726 ACGGAGGGAGTACATGTGTATAA 58.460 43.478 9.11 0.00 32.54 0.98
4637 11017 4.957954 ACGGAGGGAGTACATGTGTATAAA 59.042 41.667 9.11 0.00 32.54 1.40
4638 11018 5.422970 ACGGAGGGAGTACATGTGTATAAAA 59.577 40.000 9.11 0.00 32.54 1.52
4639 11019 6.099269 ACGGAGGGAGTACATGTGTATAAAAT 59.901 38.462 9.11 0.00 32.54 1.82
4640 11020 6.645415 CGGAGGGAGTACATGTGTATAAAATC 59.355 42.308 9.11 0.00 32.54 2.17
4641 11021 7.471539 CGGAGGGAGTACATGTGTATAAAATCT 60.472 40.741 9.11 0.00 32.54 2.40
4642 11022 7.657761 GGAGGGAGTACATGTGTATAAAATCTG 59.342 40.741 9.11 0.00 32.54 2.90
4643 11023 8.319057 AGGGAGTACATGTGTATAAAATCTGA 57.681 34.615 9.11 0.00 32.54 3.27
4644 11024 8.204836 AGGGAGTACATGTGTATAAAATCTGAC 58.795 37.037 9.11 0.00 32.54 3.51
4645 11025 7.985184 GGGAGTACATGTGTATAAAATCTGACA 59.015 37.037 9.11 0.00 32.54 3.58
4646 11026 9.378551 GGAGTACATGTGTATAAAATCTGACAA 57.621 33.333 9.11 0.00 32.54 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 5.802956 TCTGAAAAACGCGATTTGTCTTTTT 59.197 32.000 15.93 13.47 35.74 1.94
82 83 5.229260 GTCTGAAAAACGCGATTTGTCTTTT 59.771 36.000 15.93 4.05 35.74 2.27
83 84 4.733405 GTCTGAAAAACGCGATTTGTCTTT 59.267 37.500 15.93 0.00 35.74 2.52
84 85 4.279659 GTCTGAAAAACGCGATTTGTCTT 58.720 39.130 15.93 0.00 35.74 3.01
85 86 3.303791 GGTCTGAAAAACGCGATTTGTCT 60.304 43.478 15.93 0.00 35.74 3.41
86 87 2.971261 GGTCTGAAAAACGCGATTTGTC 59.029 45.455 15.93 14.53 35.34 3.18
87 88 2.601266 CGGTCTGAAAAACGCGATTTGT 60.601 45.455 15.93 4.66 0.00 2.83
88 89 1.969256 CGGTCTGAAAAACGCGATTTG 59.031 47.619 15.93 1.74 0.00 2.32
89 90 1.868498 TCGGTCTGAAAAACGCGATTT 59.132 42.857 15.93 11.81 0.00 2.17
90 91 1.504359 TCGGTCTGAAAAACGCGATT 58.496 45.000 15.93 3.59 0.00 3.34
91 92 1.393539 CATCGGTCTGAAAAACGCGAT 59.606 47.619 15.93 0.00 33.39 4.58
92 93 0.787787 CATCGGTCTGAAAAACGCGA 59.212 50.000 15.93 0.00 0.00 5.87
93 94 0.787787 TCATCGGTCTGAAAAACGCG 59.212 50.000 3.53 3.53 0.00 6.01
94 95 2.032377 TGTTCATCGGTCTGAAAAACGC 60.032 45.455 5.52 0.00 36.92 4.84
95 96 3.247648 ACTGTTCATCGGTCTGAAAAACG 59.752 43.478 5.52 0.00 36.92 3.60
96 97 4.527564 CACTGTTCATCGGTCTGAAAAAC 58.472 43.478 3.63 3.63 36.92 2.43
97 98 3.003275 GCACTGTTCATCGGTCTGAAAAA 59.997 43.478 0.00 0.00 36.92 1.94
98 99 2.548057 GCACTGTTCATCGGTCTGAAAA 59.452 45.455 0.00 0.00 36.92 2.29
99 100 2.143122 GCACTGTTCATCGGTCTGAAA 58.857 47.619 0.00 0.00 36.92 2.69
100 101 1.795768 GCACTGTTCATCGGTCTGAA 58.204 50.000 0.00 0.00 32.67 3.02
101 102 0.388520 CGCACTGTTCATCGGTCTGA 60.389 55.000 0.00 0.00 32.67 3.27
102 103 0.388520 TCGCACTGTTCATCGGTCTG 60.389 55.000 0.00 0.00 32.67 3.51
103 104 0.317160 TTCGCACTGTTCATCGGTCT 59.683 50.000 0.00 0.00 32.67 3.85
104 105 0.438830 GTTCGCACTGTTCATCGGTC 59.561 55.000 0.00 0.00 32.67 4.79
105 106 0.249699 TGTTCGCACTGTTCATCGGT 60.250 50.000 0.00 0.00 35.83 4.69
106 107 0.163788 GTGTTCGCACTGTTCATCGG 59.836 55.000 0.00 0.00 44.38 4.18
107 108 3.639222 GTGTTCGCACTGTTCATCG 57.361 52.632 0.00 0.00 44.38 3.84
116 117 6.615839 GTTCTAATAGTGAACAGTGTTCGCAC 60.616 42.308 37.60 27.42 42.22 5.34
117 118 5.128992 TCTAATAGTGAACAGTGTTCGCA 57.871 39.130 37.60 27.43 0.00 5.10
118 119 5.634020 AGTTCTAATAGTGAACAGTGTTCGC 59.366 40.000 32.70 32.70 44.30 4.70
119 120 6.089551 CCAGTTCTAATAGTGAACAGTGTTCG 59.910 42.308 26.59 13.35 44.30 3.95
120 121 6.929606 ACCAGTTCTAATAGTGAACAGTGTTC 59.070 38.462 25.99 25.99 44.30 3.18
121 122 6.827727 ACCAGTTCTAATAGTGAACAGTGTT 58.172 36.000 8.61 8.61 44.30 3.32
122 123 6.420913 ACCAGTTCTAATAGTGAACAGTGT 57.579 37.500 8.91 0.00 44.30 3.55
123 124 7.730364 AAACCAGTTCTAATAGTGAACAGTG 57.270 36.000 8.91 0.00 44.30 3.66
124 125 8.747538 AAAAACCAGTTCTAATAGTGAACAGT 57.252 30.769 8.91 3.75 44.30 3.55
125 126 9.057089 AGAAAAACCAGTTCTAATAGTGAACAG 57.943 33.333 8.91 1.63 44.30 3.16
126 127 8.974060 AGAAAAACCAGTTCTAATAGTGAACA 57.026 30.769 8.91 0.00 44.30 3.18
127 128 9.274206 AGAGAAAAACCAGTTCTAATAGTGAAC 57.726 33.333 0.00 0.00 42.77 3.18
128 129 9.847224 AAGAGAAAAACCAGTTCTAATAGTGAA 57.153 29.630 0.00 0.00 35.46 3.18
129 130 9.847224 AAAGAGAAAAACCAGTTCTAATAGTGA 57.153 29.630 0.00 0.00 35.46 3.41
154 155 6.714810 ACATTATGGTGAGAGCTACACAAAAA 59.285 34.615 20.12 12.71 39.65 1.94
155 156 6.237901 ACATTATGGTGAGAGCTACACAAAA 58.762 36.000 20.12 12.96 39.65 2.44
156 157 5.804639 ACATTATGGTGAGAGCTACACAAA 58.195 37.500 20.12 13.22 39.65 2.83
157 158 5.420725 ACATTATGGTGAGAGCTACACAA 57.579 39.130 20.12 12.68 39.65 3.33
158 159 6.731292 ATACATTATGGTGAGAGCTACACA 57.269 37.500 20.12 10.28 39.65 3.72
159 160 7.096023 CGAAATACATTATGGTGAGAGCTACAC 60.096 40.741 13.12 13.12 37.51 2.90
160 161 6.923508 CGAAATACATTATGGTGAGAGCTACA 59.076 38.462 0.00 0.00 0.00 2.74
161 162 6.924060 ACGAAATACATTATGGTGAGAGCTAC 59.076 38.462 0.00 0.00 0.00 3.58
162 163 7.050970 ACGAAATACATTATGGTGAGAGCTA 57.949 36.000 0.00 0.00 0.00 3.32
163 164 5.918608 ACGAAATACATTATGGTGAGAGCT 58.081 37.500 0.00 0.00 0.00 4.09
164 165 6.037172 ACAACGAAATACATTATGGTGAGAGC 59.963 38.462 0.00 0.00 0.00 4.09
165 166 7.277760 TGACAACGAAATACATTATGGTGAGAG 59.722 37.037 0.00 0.00 0.00 3.20
166 167 7.100409 TGACAACGAAATACATTATGGTGAGA 58.900 34.615 0.00 0.00 0.00 3.27
167 168 7.277760 TCTGACAACGAAATACATTATGGTGAG 59.722 37.037 0.00 0.00 0.00 3.51
168 169 7.100409 TCTGACAACGAAATACATTATGGTGA 58.900 34.615 0.00 0.00 0.00 4.02
169 170 7.302350 TCTGACAACGAAATACATTATGGTG 57.698 36.000 0.00 0.00 0.00 4.17
170 171 8.506168 AATCTGACAACGAAATACATTATGGT 57.494 30.769 0.00 0.00 0.00 3.55
171 172 9.787532 AAAATCTGACAACGAAATACATTATGG 57.212 29.630 0.00 0.00 0.00 2.74
180 181 9.773328 CATGTGTATAAAATCTGACAACGAAAT 57.227 29.630 0.00 0.00 0.00 2.17
181 182 8.779303 ACATGTGTATAAAATCTGACAACGAAA 58.221 29.630 0.00 0.00 0.00 3.46
182 183 8.317891 ACATGTGTATAAAATCTGACAACGAA 57.682 30.769 0.00 0.00 0.00 3.85
183 184 7.899178 ACATGTGTATAAAATCTGACAACGA 57.101 32.000 0.00 0.00 0.00 3.85
271 272 9.452287 CCATGGAGATGGTTATTTTGAAAAATT 57.548 29.630 5.56 0.00 43.98 1.82
287 288 1.070445 GGCGACCTCCATGGAGATG 59.930 63.158 38.37 27.17 44.53 2.90
288 289 3.555967 GGCGACCTCCATGGAGAT 58.444 61.111 38.37 26.96 44.53 2.75
300 301 3.733960 GGGCTTTTGACGGGCGAC 61.734 66.667 0.00 0.00 0.00 5.19
301 302 3.894547 GAGGGCTTTTGACGGGCGA 62.895 63.158 0.00 0.00 0.00 5.54
302 303 3.431725 GAGGGCTTTTGACGGGCG 61.432 66.667 0.00 0.00 0.00 6.13
303 304 2.282180 TGAGGGCTTTTGACGGGC 60.282 61.111 0.00 0.00 0.00 6.13
304 305 0.955919 GAGTGAGGGCTTTTGACGGG 60.956 60.000 0.00 0.00 0.00 5.28
305 306 1.291877 CGAGTGAGGGCTTTTGACGG 61.292 60.000 0.00 0.00 0.00 4.79
306 307 1.291877 CCGAGTGAGGGCTTTTGACG 61.292 60.000 0.00 0.00 0.00 4.35
307 308 0.250338 ACCGAGTGAGGGCTTTTGAC 60.250 55.000 0.00 0.00 35.02 3.18
308 309 0.034896 GACCGAGTGAGGGCTTTTGA 59.965 55.000 0.00 0.00 36.04 2.69
309 310 0.955919 GGACCGAGTGAGGGCTTTTG 60.956 60.000 0.00 0.00 39.91 2.44
310 311 1.375326 GGACCGAGTGAGGGCTTTT 59.625 57.895 0.00 0.00 39.91 2.27
311 312 1.415672 TTGGACCGAGTGAGGGCTTT 61.416 55.000 0.00 0.00 39.91 3.51
312 313 1.841556 TTGGACCGAGTGAGGGCTT 60.842 57.895 0.00 0.00 39.91 4.35
313 314 2.203788 TTGGACCGAGTGAGGGCT 60.204 61.111 0.00 0.00 39.91 5.19
314 315 2.047179 GTTGGACCGAGTGAGGGC 60.047 66.667 0.00 0.00 39.05 5.19
315 316 1.592223 GAGTTGGACCGAGTGAGGG 59.408 63.158 0.00 0.00 35.02 4.30
316 317 0.900647 AGGAGTTGGACCGAGTGAGG 60.901 60.000 0.00 0.00 37.30 3.86
317 318 1.835494 TAGGAGTTGGACCGAGTGAG 58.165 55.000 0.00 0.00 0.00 3.51
318 319 2.291346 TGATAGGAGTTGGACCGAGTGA 60.291 50.000 0.00 0.00 0.00 3.41
319 320 2.100197 TGATAGGAGTTGGACCGAGTG 58.900 52.381 0.00 0.00 0.00 3.51
320 321 2.526888 TGATAGGAGTTGGACCGAGT 57.473 50.000 0.00 0.00 0.00 4.18
321 322 3.195825 AGTTTGATAGGAGTTGGACCGAG 59.804 47.826 0.00 0.00 0.00 4.63
322 323 3.170717 AGTTTGATAGGAGTTGGACCGA 58.829 45.455 0.00 0.00 0.00 4.69
323 324 3.611766 AGTTTGATAGGAGTTGGACCG 57.388 47.619 0.00 0.00 0.00 4.79
346 347 9.535878 GTGAAACAAAAATTTAGTCCCACATTA 57.464 29.630 15.48 0.00 36.32 1.90
365 366 2.997980 TGCAAGTCAAGAGGTGAAACA 58.002 42.857 0.00 0.00 39.98 2.83
369 370 3.490439 TTCATGCAAGTCAAGAGGTGA 57.510 42.857 0.00 0.00 0.00 4.02
379 380 1.895238 GCAGCCCATTCATGCAAGT 59.105 52.632 0.00 0.00 39.75 3.16
442 443 6.041069 TGAAATTTTGTCTATTTTGGGTCGGT 59.959 34.615 0.00 0.00 0.00 4.69
444 445 6.089417 GCTGAAATTTTGTCTATTTTGGGTCG 59.911 38.462 0.00 0.00 0.00 4.79
503 504 7.410120 AACTGAAAAGAAAGGAACAACTGAT 57.590 32.000 0.00 0.00 0.00 2.90
561 1507 5.751586 TGGAGAAAAATAATCTAAGCGGGT 58.248 37.500 0.00 0.00 0.00 5.28
633 1581 4.083271 GCTAAACCAAGTTTCAGTAGGCAG 60.083 45.833 0.00 0.00 37.01 4.85
733 1686 6.595794 ACTACCGATATTGACGTTTTTGTTG 58.404 36.000 0.00 0.00 0.00 3.33
734 1687 6.424509 TGACTACCGATATTGACGTTTTTGTT 59.575 34.615 0.00 0.00 0.00 2.83
735 1688 5.927689 TGACTACCGATATTGACGTTTTTGT 59.072 36.000 0.00 0.00 0.00 2.83
736 1689 6.397831 TGACTACCGATATTGACGTTTTTG 57.602 37.500 0.00 0.00 0.00 2.44
737 1690 8.882415 ATATGACTACCGATATTGACGTTTTT 57.118 30.769 0.00 0.00 0.00 1.94
748 1755 9.472361 GAGCAAACTTTTATATGACTACCGATA 57.528 33.333 0.00 0.00 0.00 2.92
889 1896 5.163301 GGAAGAGCTACATATGAAAGGTCCA 60.163 44.000 24.92 0.00 38.27 4.02
915 1922 1.463444 GGTGCACTGTTTAAGTAGCCG 59.537 52.381 17.98 0.00 36.83 5.52
962 1979 1.077930 GCCGGTAACCCCTTCTTCC 60.078 63.158 1.90 0.00 0.00 3.46
986 2003 3.877357 CCATCGCTGCTGCTGCTG 61.877 66.667 25.43 18.42 40.48 4.41
1068 2085 2.631160 TACCGCCAAACATCCATAGG 57.369 50.000 0.00 0.00 0.00 2.57
1125 2142 8.455903 AGTTTGCAATAGTTATCATGCATAGT 57.544 30.769 0.00 0.00 46.97 2.12
1126 2143 9.740239 AAAGTTTGCAATAGTTATCATGCATAG 57.260 29.630 0.00 0.00 46.97 2.23
1128 2145 9.090692 GAAAAGTTTGCAATAGTTATCATGCAT 57.909 29.630 0.00 0.00 46.97 3.96
1129 2146 8.306038 AGAAAAGTTTGCAATAGTTATCATGCA 58.694 29.630 0.00 0.00 46.21 3.96
1182 2201 6.636850 CCTTCAAGTTACAAACACACAATAGC 59.363 38.462 0.00 0.00 0.00 2.97
1572 2802 6.857451 GGCATGACCAAATGAAAATGTTTTTC 59.143 34.615 0.00 5.90 38.86 2.29
1604 2834 3.243168 TGAACACAGCAGCAAAATCACTC 60.243 43.478 0.00 0.00 0.00 3.51
1817 3086 5.161943 ACAGACCCTACATTCCAAAGTAC 57.838 43.478 0.00 0.00 0.00 2.73
2069 3354 3.435601 GGTATCACTCCCATGCATTCCTT 60.436 47.826 0.00 0.00 0.00 3.36
2126 3411 3.744530 GCTCCGTCCCTAAATAGCACATT 60.745 47.826 0.00 0.00 0.00 2.71
2128 3413 1.138266 GCTCCGTCCCTAAATAGCACA 59.862 52.381 0.00 0.00 0.00 4.57
2182 3496 5.123936 GGAGTAGTTGGGTTAGCCAAATAG 58.876 45.833 21.14 0.00 36.17 1.73
2192 3506 0.178912 ACGGAGGGAGTAGTTGGGTT 60.179 55.000 0.00 0.00 0.00 4.11
2193 3507 0.178912 AACGGAGGGAGTAGTTGGGT 60.179 55.000 0.00 0.00 0.00 4.51
2195 3509 0.535797 GGAACGGAGGGAGTAGTTGG 59.464 60.000 0.00 0.00 0.00 3.77
2210 3524 7.384387 ACAACTCTAAGACAAGTAATTCGGAAC 59.616 37.037 0.00 0.00 0.00 3.62
2211 3525 7.439381 ACAACTCTAAGACAAGTAATTCGGAA 58.561 34.615 0.00 0.00 0.00 4.30
2212 3526 6.989659 ACAACTCTAAGACAAGTAATTCGGA 58.010 36.000 0.00 0.00 0.00 4.55
2213 3527 7.091443 AGACAACTCTAAGACAAGTAATTCGG 58.909 38.462 0.00 0.00 0.00 4.30
2214 3528 9.279904 CTAGACAACTCTAAGACAAGTAATTCG 57.720 37.037 0.00 0.00 0.00 3.34
2220 3534 8.908903 CCATATCTAGACAACTCTAAGACAAGT 58.091 37.037 0.00 0.00 0.00 3.16
2221 3535 9.126151 TCCATATCTAGACAACTCTAAGACAAG 57.874 37.037 0.00 0.00 0.00 3.16
2222 3536 9.126151 CTCCATATCTAGACAACTCTAAGACAA 57.874 37.037 0.00 0.00 0.00 3.18
2223 3537 7.721842 CCTCCATATCTAGACAACTCTAAGACA 59.278 40.741 0.00 0.00 0.00 3.41
2224 3538 7.722285 ACCTCCATATCTAGACAACTCTAAGAC 59.278 40.741 0.00 0.00 0.00 3.01
2225 3539 7.817440 ACCTCCATATCTAGACAACTCTAAGA 58.183 38.462 0.00 0.00 0.00 2.10
2226 3540 9.747898 ATACCTCCATATCTAGACAACTCTAAG 57.252 37.037 0.00 0.00 0.00 2.18
2227 3541 9.742144 GATACCTCCATATCTAGACAACTCTAA 57.258 37.037 0.00 0.00 0.00 2.10
2228 3542 9.118367 AGATACCTCCATATCTAGACAACTCTA 57.882 37.037 0.00 0.00 39.63 2.43
2229 3543 7.995663 AGATACCTCCATATCTAGACAACTCT 58.004 38.462 0.00 0.00 39.63 3.24
2239 3553 8.958060 TTTTAGTGCTAGATACCTCCATATCT 57.042 34.615 0.00 1.26 43.08 1.98
2240 3554 9.593134 CATTTTAGTGCTAGATACCTCCATATC 57.407 37.037 0.00 0.00 32.55 1.63
2241 3555 9.326489 TCATTTTAGTGCTAGATACCTCCATAT 57.674 33.333 0.00 0.00 0.00 1.78
2242 3556 8.721133 TCATTTTAGTGCTAGATACCTCCATA 57.279 34.615 0.00 0.00 0.00 2.74
2243 3557 7.291182 ACTCATTTTAGTGCTAGATACCTCCAT 59.709 37.037 0.00 0.00 0.00 3.41
2244 3558 6.611642 ACTCATTTTAGTGCTAGATACCTCCA 59.388 38.462 0.00 0.00 0.00 3.86
2245 3559 7.014808 AGACTCATTTTAGTGCTAGATACCTCC 59.985 40.741 0.00 0.00 0.00 4.30
2246 3560 7.947282 AGACTCATTTTAGTGCTAGATACCTC 58.053 38.462 0.00 0.00 0.00 3.85
2247 3561 7.906199 AGACTCATTTTAGTGCTAGATACCT 57.094 36.000 0.00 0.00 0.00 3.08
2248 3562 9.069082 TCTAGACTCATTTTAGTGCTAGATACC 57.931 37.037 0.00 0.00 34.69 2.73
2252 3566 9.628500 TGTATCTAGACTCATTTTAGTGCTAGA 57.372 33.333 0.00 0.00 38.76 2.43
2255 3569 8.364142 GGATGTATCTAGACTCATTTTAGTGCT 58.636 37.037 11.25 0.00 0.00 4.40
2256 3570 7.327275 CGGATGTATCTAGACTCATTTTAGTGC 59.673 40.741 11.25 0.00 0.00 4.40
2257 3571 8.353684 ACGGATGTATCTAGACTCATTTTAGTG 58.646 37.037 11.25 3.85 0.00 2.74
2258 3572 8.466617 ACGGATGTATCTAGACTCATTTTAGT 57.533 34.615 11.25 7.70 0.00 2.24
2274 3588 7.297936 TGGATTTGTGTAGATACGGATGTAT 57.702 36.000 0.00 0.00 43.97 2.29
2275 3589 6.718522 TGGATTTGTGTAGATACGGATGTA 57.281 37.500 0.00 0.00 34.45 2.29
2276 3590 5.607939 TGGATTTGTGTAGATACGGATGT 57.392 39.130 0.00 0.00 0.00 3.06
2277 3591 6.201044 GTCTTGGATTTGTGTAGATACGGATG 59.799 42.308 0.00 0.00 0.00 3.51
2278 3592 6.127168 TGTCTTGGATTTGTGTAGATACGGAT 60.127 38.462 0.00 0.00 0.00 4.18
2279 3593 5.186215 TGTCTTGGATTTGTGTAGATACGGA 59.814 40.000 0.00 0.00 0.00 4.69
2280 3594 5.416083 TGTCTTGGATTTGTGTAGATACGG 58.584 41.667 0.00 0.00 0.00 4.02
2281 3595 6.590292 ACTTGTCTTGGATTTGTGTAGATACG 59.410 38.462 0.00 0.00 0.00 3.06
2282 3596 7.907214 ACTTGTCTTGGATTTGTGTAGATAC 57.093 36.000 0.00 0.00 0.00 2.24
2284 3598 9.520515 AATTACTTGTCTTGGATTTGTGTAGAT 57.479 29.630 0.00 0.00 0.00 1.98
2285 3599 8.918202 AATTACTTGTCTTGGATTTGTGTAGA 57.082 30.769 0.00 0.00 0.00 2.59
2286 3600 7.957484 CGAATTACTTGTCTTGGATTTGTGTAG 59.043 37.037 0.00 0.00 0.00 2.74
2287 3601 7.094975 CCGAATTACTTGTCTTGGATTTGTGTA 60.095 37.037 0.00 0.00 0.00 2.90
2288 3602 6.293955 CCGAATTACTTGTCTTGGATTTGTGT 60.294 38.462 0.00 0.00 0.00 3.72
2289 3603 6.072728 TCCGAATTACTTGTCTTGGATTTGTG 60.073 38.462 0.00 0.00 0.00 3.33
2290 3604 6.001460 TCCGAATTACTTGTCTTGGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
2291 3605 6.494893 TCCGAATTACTTGTCTTGGATTTG 57.505 37.500 0.00 0.00 0.00 2.32
2292 3606 6.348213 CGTTCCGAATTACTTGTCTTGGATTT 60.348 38.462 0.00 0.00 0.00 2.17
2293 3607 5.121768 CGTTCCGAATTACTTGTCTTGGATT 59.878 40.000 0.00 0.00 0.00 3.01
2294 3608 4.630069 CGTTCCGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
2295 3609 3.991773 CGTTCCGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
2296 3610 3.124636 CCGTTCCGAATTACTTGTCTTGG 59.875 47.826 0.00 0.00 0.00 3.61
2297 3611 3.991773 TCCGTTCCGAATTACTTGTCTTG 59.008 43.478 0.00 0.00 0.00 3.02
2298 3612 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
2299 3613 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
2300 3614 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2301 3615 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2302 3616 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2303 3617 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
2304 3618 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
2305 3619 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
2306 3620 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
2307 3621 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
2308 3622 1.856629 TTACTCCCTCCGTTCCGAAT 58.143 50.000 0.00 0.00 0.00 3.34
2309 3623 1.631405 TTTACTCCCTCCGTTCCGAA 58.369 50.000 0.00 0.00 0.00 4.30
2310 3624 1.631405 TTTTACTCCCTCCGTTCCGA 58.369 50.000 0.00 0.00 0.00 4.55
2311 3625 2.460757 TTTTTACTCCCTCCGTTCCG 57.539 50.000 0.00 0.00 0.00 4.30
2312 3626 3.946606 TGATTTTTACTCCCTCCGTTCC 58.053 45.455 0.00 0.00 0.00 3.62
2313 3627 5.619309 GCTTTGATTTTTACTCCCTCCGTTC 60.619 44.000 0.00 0.00 0.00 3.95
2314 3628 4.217767 GCTTTGATTTTTACTCCCTCCGTT 59.782 41.667 0.00 0.00 0.00 4.44
2315 3629 3.756963 GCTTTGATTTTTACTCCCTCCGT 59.243 43.478 0.00 0.00 0.00 4.69
2316 3630 4.010349 AGCTTTGATTTTTACTCCCTCCG 58.990 43.478 0.00 0.00 0.00 4.63
2317 3631 5.010282 TCAGCTTTGATTTTTACTCCCTCC 58.990 41.667 0.00 0.00 0.00 4.30
2318 3632 6.382608 GTTCAGCTTTGATTTTTACTCCCTC 58.617 40.000 0.00 0.00 0.00 4.30
2319 3633 5.243954 GGTTCAGCTTTGATTTTTACTCCCT 59.756 40.000 0.00 0.00 0.00 4.20
2320 3634 5.470368 GGTTCAGCTTTGATTTTTACTCCC 58.530 41.667 0.00 0.00 0.00 4.30
2321 3635 5.010617 TGGGTTCAGCTTTGATTTTTACTCC 59.989 40.000 0.00 0.00 0.00 3.85
2322 3636 6.084326 TGGGTTCAGCTTTGATTTTTACTC 57.916 37.500 0.00 0.00 0.00 2.59
2323 3637 6.670695 ATGGGTTCAGCTTTGATTTTTACT 57.329 33.333 0.00 0.00 0.00 2.24
2324 3638 8.708742 GTTAATGGGTTCAGCTTTGATTTTTAC 58.291 33.333 0.00 0.00 0.00 2.01
2402 3769 7.933215 AATTTGGGTGTGAACTAACTATACC 57.067 36.000 0.00 0.00 0.00 2.73
2429 3796 1.112315 GCACACAATCCAACCCACCA 61.112 55.000 0.00 0.00 0.00 4.17
2430 3797 0.827507 AGCACACAATCCAACCCACC 60.828 55.000 0.00 0.00 0.00 4.61
2478 4026 9.191479 GGGTGCTAGCTATTTAGATATAGAAGA 57.809 37.037 17.23 0.00 31.10 2.87
2479 4027 8.972127 TGGGTGCTAGCTATTTAGATATAGAAG 58.028 37.037 17.23 0.00 31.10 2.85
2480 4028 8.750298 GTGGGTGCTAGCTATTTAGATATAGAA 58.250 37.037 17.23 0.00 31.10 2.10
2481 4029 8.116669 AGTGGGTGCTAGCTATTTAGATATAGA 58.883 37.037 17.23 0.00 31.10 1.98
2501 4049 7.496346 TGTTGAGAGAAATATCTTAGTGGGT 57.504 36.000 0.00 0.00 35.54 4.51
2536 4084 7.040686 CCTTATGCATGTTGAATGATGAGATGA 60.041 37.037 10.16 0.00 0.00 2.92
2539 4087 6.358991 TCCTTATGCATGTTGAATGATGAGA 58.641 36.000 10.16 0.00 0.00 3.27
2562 4110 1.404583 GCATGTTGAGGTGGGCATTTC 60.405 52.381 0.00 0.00 0.00 2.17
2566 4114 1.152589 TTGCATGTTGAGGTGGGCA 60.153 52.632 0.00 0.00 0.00 5.36
2895 9275 2.194597 GGTGCACCTGGGTGTTCA 59.805 61.111 29.12 8.47 46.90 3.18
2903 9283 0.179062 GGATAGAGCTGGTGCACCTG 60.179 60.000 34.75 33.39 42.74 4.00
3113 9493 8.683550 TGTTTAGCATATATACGGATTCGAAG 57.316 34.615 0.00 0.00 40.11 3.79
3183 9563 5.768317 TGGTCTAGTTTTTGCATGCTTTAC 58.232 37.500 20.33 11.41 0.00 2.01
3289 9669 5.355071 CAGATATAACCACGGCATGCATATT 59.645 40.000 21.36 8.44 0.00 1.28
3533 9913 4.836825 AGAAATCCATCATTGTCACTCGT 58.163 39.130 0.00 0.00 0.00 4.18
3837 10217 8.293867 GCGGCACATTTCTTACCAATATAAATA 58.706 33.333 0.00 0.00 0.00 1.40
3884 10264 4.479786 AGTTCAAGAATCTAGTCTGGCC 57.520 45.455 0.00 0.00 0.00 5.36
3908 10288 9.994432 CAGTTGTTCTTTCTATGGAATTCATAC 57.006 33.333 7.93 0.00 37.30 2.39
3912 10292 6.803807 GTGCAGTTGTTCTTTCTATGGAATTC 59.196 38.462 0.00 0.00 0.00 2.17
4328 10708 5.300539 GCACAACTCCATCTACTAGATCTCA 59.699 44.000 0.00 0.00 31.32 3.27
4329 10709 5.300539 TGCACAACTCCATCTACTAGATCTC 59.699 44.000 0.00 0.00 31.32 2.75
4330 10710 5.204292 TGCACAACTCCATCTACTAGATCT 58.796 41.667 0.00 0.00 31.32 2.75
4331 10711 5.300539 TCTGCACAACTCCATCTACTAGATC 59.699 44.000 0.00 0.00 31.32 2.75
4332 10712 5.204292 TCTGCACAACTCCATCTACTAGAT 58.796 41.667 0.00 0.00 34.74 1.98
4333 10713 4.600062 TCTGCACAACTCCATCTACTAGA 58.400 43.478 0.00 0.00 0.00 2.43
4334 10714 4.400884 ACTCTGCACAACTCCATCTACTAG 59.599 45.833 0.00 0.00 0.00 2.57
4335 10715 4.158579 CACTCTGCACAACTCCATCTACTA 59.841 45.833 0.00 0.00 0.00 1.82
4336 10716 3.056250 CACTCTGCACAACTCCATCTACT 60.056 47.826 0.00 0.00 0.00 2.57
4337 10717 3.056536 TCACTCTGCACAACTCCATCTAC 60.057 47.826 0.00 0.00 0.00 2.59
4338 10718 3.165071 TCACTCTGCACAACTCCATCTA 58.835 45.455 0.00 0.00 0.00 1.98
4339 10719 1.973515 TCACTCTGCACAACTCCATCT 59.026 47.619 0.00 0.00 0.00 2.90
4340 10720 2.344950 CTCACTCTGCACAACTCCATC 58.655 52.381 0.00 0.00 0.00 3.51
4341 10721 1.002888 CCTCACTCTGCACAACTCCAT 59.997 52.381 0.00 0.00 0.00 3.41
4342 10722 0.394192 CCTCACTCTGCACAACTCCA 59.606 55.000 0.00 0.00 0.00 3.86
4343 10723 0.321122 CCCTCACTCTGCACAACTCC 60.321 60.000 0.00 0.00 0.00 3.85
4344 10724 0.952984 GCCCTCACTCTGCACAACTC 60.953 60.000 0.00 0.00 0.00 3.01
4345 10725 1.072159 GCCCTCACTCTGCACAACT 59.928 57.895 0.00 0.00 0.00 3.16
4346 10726 0.536006 AAGCCCTCACTCTGCACAAC 60.536 55.000 0.00 0.00 0.00 3.32
4347 10727 0.183492 AAAGCCCTCACTCTGCACAA 59.817 50.000 0.00 0.00 0.00 3.33
4348 10728 0.183492 AAAAGCCCTCACTCTGCACA 59.817 50.000 0.00 0.00 0.00 4.57
4349 10729 0.595095 CAAAAGCCCTCACTCTGCAC 59.405 55.000 0.00 0.00 0.00 4.57
4350 10730 0.538057 CCAAAAGCCCTCACTCTGCA 60.538 55.000 0.00 0.00 0.00 4.41
4351 10731 1.871126 GCCAAAAGCCCTCACTCTGC 61.871 60.000 0.00 0.00 34.35 4.26
4352 10732 1.580845 CGCCAAAAGCCCTCACTCTG 61.581 60.000 0.00 0.00 38.78 3.35
4353 10733 1.302832 CGCCAAAAGCCCTCACTCT 60.303 57.895 0.00 0.00 38.78 3.24
4354 10734 2.335712 CCGCCAAAAGCCCTCACTC 61.336 63.158 0.00 0.00 38.78 3.51
4355 10735 2.282462 CCGCCAAAAGCCCTCACT 60.282 61.111 0.00 0.00 38.78 3.41
4356 10736 3.373565 CCCGCCAAAAGCCCTCAC 61.374 66.667 0.00 0.00 38.78 3.51
4359 10739 4.932105 TTGCCCGCCAAAAGCCCT 62.932 61.111 0.00 0.00 38.78 5.19
4360 10740 4.680237 GTTGCCCGCCAAAAGCCC 62.680 66.667 0.00 0.00 38.78 5.19
4361 10741 4.680237 GGTTGCCCGCCAAAAGCC 62.680 66.667 0.00 0.00 38.78 4.35
4362 10742 3.573772 GAGGTTGCCCGCCAAAAGC 62.574 63.158 0.00 0.00 34.68 3.51
4363 10743 0.608035 TAGAGGTTGCCCGCCAAAAG 60.608 55.000 0.00 0.00 34.68 2.27
4364 10744 0.039035 ATAGAGGTTGCCCGCCAAAA 59.961 50.000 0.00 0.00 34.68 2.44
4365 10745 0.679640 CATAGAGGTTGCCCGCCAAA 60.680 55.000 0.00 0.00 34.68 3.28
4366 10746 1.077787 CATAGAGGTTGCCCGCCAA 60.078 57.895 0.00 0.00 35.12 4.52
4367 10747 2.589540 CATAGAGGTTGCCCGCCA 59.410 61.111 0.00 0.00 35.12 5.69
4368 10748 2.203209 CCATAGAGGTTGCCCGCC 60.203 66.667 0.00 0.00 35.12 6.13
4369 10749 1.227674 CTCCATAGAGGTTGCCCGC 60.228 63.158 0.00 0.00 39.02 6.13
4378 10758 7.938140 TTTCAAAATAACCACCTCCATAGAG 57.062 36.000 0.00 0.00 40.09 2.43
4379 10759 8.713708 TTTTTCAAAATAACCACCTCCATAGA 57.286 30.769 0.00 0.00 0.00 1.98
4380 10760 9.942850 AATTTTTCAAAATAACCACCTCCATAG 57.057 29.630 0.00 0.00 37.62 2.23
4381 10761 9.936759 GAATTTTTCAAAATAACCACCTCCATA 57.063 29.630 0.00 0.00 37.62 2.74
4382 10762 8.435982 TGAATTTTTCAAAATAACCACCTCCAT 58.564 29.630 0.00 0.00 37.62 3.41
4383 10763 7.796054 TGAATTTTTCAAAATAACCACCTCCA 58.204 30.769 0.00 0.00 37.62 3.86
4384 10764 8.669946 TTGAATTTTTCAAAATAACCACCTCC 57.330 30.769 0.37 0.00 45.94 4.30
4440 10820 9.935241 GAGTAGAATACATCCATATGAACATGT 57.065 33.333 3.65 11.35 46.26 3.21
4441 10821 9.376075 GGAGTAGAATACATCCATATGAACATG 57.624 37.037 3.65 6.06 46.26 3.21
4442 10822 8.543774 GGGAGTAGAATACATCCATATGAACAT 58.456 37.037 3.65 0.00 46.26 2.71
4443 10823 7.734865 AGGGAGTAGAATACATCCATATGAACA 59.265 37.037 3.65 0.00 46.26 3.18
4444 10824 8.140112 AGGGAGTAGAATACATCCATATGAAC 57.860 38.462 3.65 0.00 46.26 3.18
4445 10825 7.400339 GGAGGGAGTAGAATACATCCATATGAA 59.600 40.741 3.65 0.00 46.26 2.57
4446 10826 6.897966 GGAGGGAGTAGAATACATCCATATGA 59.102 42.308 3.65 0.00 46.26 2.15
4447 10827 6.183360 CGGAGGGAGTAGAATACATCCATATG 60.183 46.154 0.00 0.00 46.26 1.78
4448 10828 5.894393 CGGAGGGAGTAGAATACATCCATAT 59.106 44.000 0.00 0.00 46.26 1.78
4449 10829 5.222275 ACGGAGGGAGTAGAATACATCCATA 60.222 44.000 0.00 0.00 46.26 2.74
4450 10830 4.090090 CGGAGGGAGTAGAATACATCCAT 58.910 47.826 0.00 0.00 46.26 3.41
4451 10831 3.117246 ACGGAGGGAGTAGAATACATCCA 60.117 47.826 0.00 0.00 46.26 3.41
4452 10832 3.498334 ACGGAGGGAGTAGAATACATCC 58.502 50.000 0.00 0.00 46.26 3.51
4453 10833 4.022155 GGAACGGAGGGAGTAGAATACATC 60.022 50.000 0.00 0.00 46.26 3.06
4454 10834 3.896272 GGAACGGAGGGAGTAGAATACAT 59.104 47.826 0.00 0.00 46.26 2.29
4455 10835 3.053095 AGGAACGGAGGGAGTAGAATACA 60.053 47.826 0.00 0.00 46.26 2.29
4456 10836 3.564264 AGGAACGGAGGGAGTAGAATAC 58.436 50.000 0.00 0.00 43.47 1.89
4457 10837 3.967467 AGGAACGGAGGGAGTAGAATA 57.033 47.619 0.00 0.00 0.00 1.75
4458 10838 2.850695 AGGAACGGAGGGAGTAGAAT 57.149 50.000 0.00 0.00 0.00 2.40
4459 10839 3.744940 TTAGGAACGGAGGGAGTAGAA 57.255 47.619 0.00 0.00 0.00 2.10
4460 10840 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
4461 10841 5.139001 AGTATTTAGGAACGGAGGGAGTAG 58.861 45.833 0.00 0.00 0.00 2.57
4462 10842 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
4463 10843 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
4464 10844 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
4465 10845 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
4466 10846 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
4467 10847 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
4468 10848 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
4469 10849 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
4470 10850 7.491696 CCTAGAAAGACAAGTATTTAGGAACGG 59.508 40.741 4.01 0.00 26.70 4.44
4471 10851 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
4472 10852 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
4473 10853 7.913789 TGCCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 11.40 1.02 26.70 3.36
4474 10854 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
4475 10855 8.738645 AATGCCTAGAAAGACAAGTATTTAGG 57.261 34.615 5.26 5.26 0.00 2.69
4477 10857 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
4478 10858 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
4479 10859 8.515414 GTTGAAATGCCTAGAAAGACAAGTATT 58.485 33.333 0.00 0.00 0.00 1.89
4480 10860 7.665559 TGTTGAAATGCCTAGAAAGACAAGTAT 59.334 33.333 0.00 0.00 0.00 2.12
4481 10861 6.995686 TGTTGAAATGCCTAGAAAGACAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
4482 10862 5.827797 TGTTGAAATGCCTAGAAAGACAAGT 59.172 36.000 0.00 0.00 0.00 3.16
4483 10863 6.317789 TGTTGAAATGCCTAGAAAGACAAG 57.682 37.500 0.00 0.00 0.00 3.16
4484 10864 6.707440 TTGTTGAAATGCCTAGAAAGACAA 57.293 33.333 0.00 0.00 0.00 3.18
4485 10865 6.707440 TTTGTTGAAATGCCTAGAAAGACA 57.293 33.333 0.00 0.00 0.00 3.41
4486 10866 7.327032 GTCATTTGTTGAAATGCCTAGAAAGAC 59.673 37.037 0.00 0.00 45.61 3.01
4487 10867 7.231317 AGTCATTTGTTGAAATGCCTAGAAAGA 59.769 33.333 0.00 0.00 45.61 2.52
4488 10868 7.373493 AGTCATTTGTTGAAATGCCTAGAAAG 58.627 34.615 0.00 0.00 45.61 2.62
4489 10869 7.288810 AGTCATTTGTTGAAATGCCTAGAAA 57.711 32.000 0.00 0.00 45.61 2.52
4490 10870 6.899393 AGTCATTTGTTGAAATGCCTAGAA 57.101 33.333 0.00 0.00 45.61 2.10
4491 10871 6.939730 TGTAGTCATTTGTTGAAATGCCTAGA 59.060 34.615 0.00 0.00 45.61 2.43
4492 10872 7.144722 TGTAGTCATTTGTTGAAATGCCTAG 57.855 36.000 0.00 0.00 45.61 3.02
4493 10873 7.701539 ATGTAGTCATTTGTTGAAATGCCTA 57.298 32.000 0.00 0.00 45.61 3.93
4494 10874 6.594788 ATGTAGTCATTTGTTGAAATGCCT 57.405 33.333 0.00 0.00 45.61 4.75
4495 10875 6.468956 CGTATGTAGTCATTTGTTGAAATGCC 59.531 38.462 0.00 0.00 45.61 4.40
4496 10876 6.468956 CCGTATGTAGTCATTTGTTGAAATGC 59.531 38.462 0.00 0.00 45.61 3.56
4497 10877 7.747888 TCCGTATGTAGTCATTTGTTGAAATG 58.252 34.615 0.00 0.00 46.84 2.32
4498 10878 7.414098 GCTCCGTATGTAGTCATTTGTTGAAAT 60.414 37.037 0.00 0.00 35.70 2.17
4499 10879 6.128391 GCTCCGTATGTAGTCATTTGTTGAAA 60.128 38.462 0.00 0.00 35.70 2.69
4500 10880 5.350365 GCTCCGTATGTAGTCATTTGTTGAA 59.650 40.000 0.00 0.00 35.70 2.69
4501 10881 4.868171 GCTCCGTATGTAGTCATTTGTTGA 59.132 41.667 0.00 0.00 35.70 3.18
4502 10882 4.629634 TGCTCCGTATGTAGTCATTTGTTG 59.370 41.667 0.00 0.00 35.70 3.33
4503 10883 4.827692 TGCTCCGTATGTAGTCATTTGTT 58.172 39.130 0.00 0.00 35.70 2.83
4504 10884 4.465632 TGCTCCGTATGTAGTCATTTGT 57.534 40.909 0.00 0.00 35.70 2.83
4505 10885 5.794687 TTTGCTCCGTATGTAGTCATTTG 57.205 39.130 0.00 0.00 35.70 2.32
4506 10886 6.597672 TCATTTTGCTCCGTATGTAGTCATTT 59.402 34.615 0.00 0.00 35.70 2.32
4507 10887 6.112734 TCATTTTGCTCCGTATGTAGTCATT 58.887 36.000 0.00 0.00 35.70 2.57
4508 10888 5.670485 TCATTTTGCTCCGTATGTAGTCAT 58.330 37.500 0.00 0.00 38.00 3.06
4509 10889 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
4510 10890 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
4511 10891 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
4512 10892 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
4513 10893 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
4514 10894 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
4515 10895 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
4516 10896 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
4517 10897 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
4518 10898 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
4519 10899 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
4520 10900 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
4521 10901 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
4537 10917 9.967346 GCATGTAGACATATTTTAGAGTGTAGA 57.033 33.333 0.00 0.00 34.26 2.59
4538 10918 9.750125 TGCATGTAGACATATTTTAGAGTGTAG 57.250 33.333 0.00 0.00 34.26 2.74
4540 10920 9.265901 GATGCATGTAGACATATTTTAGAGTGT 57.734 33.333 2.46 0.00 34.26 3.55
4541 10921 8.715998 GGATGCATGTAGACATATTTTAGAGTG 58.284 37.037 2.46 0.00 34.26 3.51
4542 10922 7.600375 CGGATGCATGTAGACATATTTTAGAGT 59.400 37.037 2.46 0.00 34.26 3.24
4543 10923 7.412346 GCGGATGCATGTAGACATATTTTAGAG 60.412 40.741 2.46 0.00 42.15 2.43
4544 10924 6.368791 GCGGATGCATGTAGACATATTTTAGA 59.631 38.462 2.46 0.00 42.15 2.10
4545 10925 6.537566 GCGGATGCATGTAGACATATTTTAG 58.462 40.000 2.46 0.00 42.15 1.85
4546 10926 6.480524 GCGGATGCATGTAGACATATTTTA 57.519 37.500 2.46 0.00 42.15 1.52
4547 10927 5.362556 GCGGATGCATGTAGACATATTTT 57.637 39.130 2.46 0.00 42.15 1.82
4562 10942 5.049474 TCAAATGACTATTACATGCGGATGC 60.049 40.000 17.63 0.00 43.20 3.91
4563 10943 6.544038 TCAAATGACTATTACATGCGGATG 57.456 37.500 16.07 16.07 35.49 3.51
4564 10944 7.566760 TTTCAAATGACTATTACATGCGGAT 57.433 32.000 0.00 0.00 0.00 4.18
4565 10945 6.993786 TTTCAAATGACTATTACATGCGGA 57.006 33.333 0.00 0.00 0.00 5.54
4566 10946 7.195646 ACATTTCAAATGACTATTACATGCGG 58.804 34.615 17.30 0.00 0.00 5.69
4567 10947 8.124823 AGACATTTCAAATGACTATTACATGCG 58.875 33.333 17.30 0.00 0.00 4.73
4591 10971 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4592 10972 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4593 10973 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4594 10974 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4595 10975 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
4596 10976 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4597 10977 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4598 10978 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4599 10979 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4600 10980 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
4601 10981 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
4602 10982 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
4603 10983 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
4604 10984 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
4605 10985 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
4606 10986 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
4607 10987 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
4608 10988 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
4609 10989 2.024655 ACATGTACTCCCTCCGTTCCTA 60.025 50.000 0.00 0.00 0.00 2.94
4610 10990 1.273098 ACATGTACTCCCTCCGTTCCT 60.273 52.381 0.00 0.00 0.00 3.36
4611 10991 1.134788 CACATGTACTCCCTCCGTTCC 60.135 57.143 0.00 0.00 0.00 3.62
4612 10992 1.549170 ACACATGTACTCCCTCCGTTC 59.451 52.381 0.00 0.00 0.00 3.95
4613 10993 1.640917 ACACATGTACTCCCTCCGTT 58.359 50.000 0.00 0.00 0.00 4.44
4614 10994 2.519771 TACACATGTACTCCCTCCGT 57.480 50.000 0.00 0.00 0.00 4.69
4615 10995 5.524971 TTTATACACATGTACTCCCTCCG 57.475 43.478 0.00 0.00 32.72 4.63
4616 10996 7.657761 CAGATTTTATACACATGTACTCCCTCC 59.342 40.741 0.00 0.00 32.72 4.30
4617 10997 8.421784 TCAGATTTTATACACATGTACTCCCTC 58.578 37.037 0.00 0.00 32.72 4.30
4618 10998 8.204836 GTCAGATTTTATACACATGTACTCCCT 58.795 37.037 0.00 0.00 32.72 4.20
4619 10999 7.985184 TGTCAGATTTTATACACATGTACTCCC 59.015 37.037 0.00 0.00 32.72 4.30
4620 11000 8.942338 TGTCAGATTTTATACACATGTACTCC 57.058 34.615 0.00 0.00 32.72 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.