Multiple sequence alignment - TraesCS6A01G162600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G162600 chr6A 100.000 8215 0 0 1 8215 157968768 157960554 0.000000e+00 15171.0
1 TraesCS6A01G162600 chr6A 91.503 153 12 1 1 153 157971292 157971443 8.350000e-50 209.0
2 TraesCS6A01G162600 chr6A 96.460 113 3 1 1515 1627 408886183 408886072 1.410000e-42 185.0
3 TraesCS6A01G162600 chr6D 97.370 3308 74 6 1809 5106 123156052 123159356 0.000000e+00 5614.0
4 TraesCS6A01G162600 chr6D 97.629 3121 53 10 5099 8215 123160043 123163146 0.000000e+00 5334.0
5 TraesCS6A01G162600 chr6D 90.403 1240 52 12 307 1516 123154686 123155888 0.000000e+00 1568.0
6 TraesCS6A01G162600 chr6D 93.642 173 9 1 1619 1789 123155886 123156058 2.940000e-64 257.0
7 TraesCS6A01G162600 chr6D 84.472 161 16 9 4471 4627 385564723 385564568 5.140000e-32 150.0
8 TraesCS6A01G162600 chr6D 76.991 226 37 13 5529 5749 103189035 103189250 1.870000e-21 115.0
9 TraesCS6A01G162600 chr6D 93.182 44 3 0 480 523 194805389 194805346 1.910000e-06 65.8
10 TraesCS6A01G162600 chr6B 96.177 3296 81 10 1832 5106 217166113 217169384 0.000000e+00 5347.0
11 TraesCS6A01G162600 chr6B 97.853 2003 34 4 5130 7129 217169921 217171917 0.000000e+00 3452.0
12 TraesCS6A01G162600 chr6B 94.820 888 32 6 635 1516 217164642 217165521 0.000000e+00 1373.0
13 TraesCS6A01G162600 chr6B 90.331 755 32 20 7485 8215 217172352 217173089 0.000000e+00 952.0
14 TraesCS6A01G162600 chr6B 92.814 167 11 1 7165 7331 217171916 217172081 2.960000e-59 241.0
15 TraesCS6A01G162600 chr6B 83.206 262 31 8 4727 4981 581938066 581937811 2.310000e-55 228.0
16 TraesCS6A01G162600 chr6B 90.850 153 14 0 1 153 20494259 20494411 1.080000e-48 206.0
17 TraesCS6A01G162600 chr6B 90.625 160 7 1 1638 1789 217165700 217165859 1.080000e-48 206.0
18 TraesCS6A01G162600 chr6B 98.182 110 2 0 1512 1621 706130302 706130411 8.410000e-45 193.0
19 TraesCS6A01G162600 chr6B 94.309 123 4 2 7323 7443 217172234 217172355 1.410000e-42 185.0
20 TraesCS6A01G162600 chr6B 100.000 34 0 0 1811 1844 217165855 217165888 6.880000e-06 63.9
21 TraesCS6A01G162600 chr7D 80.726 358 67 2 1041 1397 485831240 485831596 2.260000e-70 278.0
22 TraesCS6A01G162600 chr7D 88.485 165 18 1 1 165 505333193 505333356 1.810000e-46 198.0
23 TraesCS6A01G162600 chr7B 80.833 360 63 5 1041 1397 513652191 513652547 2.260000e-70 278.0
24 TraesCS6A01G162600 chr7B 91.489 47 4 0 477 523 459908339 459908385 1.910000e-06 65.8
25 TraesCS6A01G162600 chr7A 80.726 358 67 2 1041 1397 554390245 554390601 2.260000e-70 278.0
26 TraesCS6A01G162600 chr7A 96.774 155 5 0 1 155 666551676 666551522 8.180000e-65 259.0
27 TraesCS6A01G162600 chr7A 76.566 495 101 12 3931 4420 554393550 554394034 2.940000e-64 257.0
28 TraesCS6A01G162600 chr7A 97.321 112 3 0 1512 1623 192671853 192671964 3.030000e-44 191.0
29 TraesCS6A01G162600 chr7A 89.706 136 12 2 1515 1650 46523037 46522904 1.100000e-38 172.0
30 TraesCS6A01G162600 chr7A 86.525 141 14 3 4476 4613 441920803 441920665 5.140000e-32 150.0
31 TraesCS6A01G162600 chr2A 78.947 437 67 18 4636 5054 743549123 743549552 2.920000e-69 274.0
32 TraesCS6A01G162600 chr2A 85.616 146 17 2 4476 4617 622265224 622265369 5.140000e-32 150.0
33 TraesCS6A01G162600 chr2A 93.182 44 3 0 480 523 237078919 237078876 1.910000e-06 65.8
34 TraesCS6A01G162600 chr3D 84.043 282 25 7 4727 4993 347453097 347452821 3.810000e-63 254.0
35 TraesCS6A01G162600 chr2D 77.701 435 75 19 4636 5054 611219392 611219820 6.370000e-61 246.0
36 TraesCS6A01G162600 chr2D 84.496 258 29 9 4729 4981 94386424 94386675 2.290000e-60 244.0
37 TraesCS6A01G162600 chr2D 82.772 267 37 3 4727 4985 477418289 477418024 6.410000e-56 230.0
38 TraesCS6A01G162600 chr2D 90.968 155 14 0 1 155 430630252 430630406 8.350000e-50 209.0
39 TraesCS6A01G162600 chr2D 90.385 156 15 0 1 156 94716262 94716417 1.080000e-48 206.0
40 TraesCS6A01G162600 chr2D 97.222 36 1 0 480 515 502068259 502068224 2.480000e-05 62.1
41 TraesCS6A01G162600 chr4B 94.805 154 7 1 1 153 535095904 535095751 1.070000e-58 239.0
42 TraesCS6A01G162600 chr4B 94.156 154 9 0 2 155 535098074 535098227 1.380000e-57 235.0
43 TraesCS6A01G162600 chr4B 93.182 44 3 0 480 523 157157291 157157248 1.910000e-06 65.8
44 TraesCS6A01G162600 chr4B 93.182 44 2 1 480 523 438951015 438950973 6.880000e-06 63.9
45 TraesCS6A01G162600 chr3A 82.955 264 37 3 4724 4980 51742499 51742237 1.780000e-56 231.0
46 TraesCS6A01G162600 chr3A 79.498 239 34 13 5513 5748 83778031 83778257 1.100000e-33 156.0
47 TraesCS6A01G162600 chr3A 86.301 146 16 2 4476 4617 264950426 264950281 1.100000e-33 156.0
48 TraesCS6A01G162600 chr4D 90.625 160 13 1 1 158 111580163 111580004 2.320000e-50 211.0
49 TraesCS6A01G162600 chr4D 93.651 126 6 1 1515 1640 509340376 509340253 3.910000e-43 187.0
50 TraesCS6A01G162600 chr4A 98.182 110 2 0 1512 1621 466934818 466934927 8.410000e-45 193.0
51 TraesCS6A01G162600 chr4A 94.958 119 3 3 1515 1630 314669070 314669188 5.060000e-42 183.0
52 TraesCS6A01G162600 chr4A 88.811 143 12 4 1511 1652 183620113 183620252 1.100000e-38 172.0
53 TraesCS6A01G162600 chr4A 86.897 145 15 2 4476 4617 179695649 179695506 8.530000e-35 159.0
54 TraesCS6A01G162600 chr1A 96.491 114 3 1 1510 1622 119717291 119717404 3.910000e-43 187.0
55 TraesCS6A01G162600 chr2B 87.681 138 12 3 4478 4613 775120766 775120632 1.100000e-33 156.0
56 TraesCS6A01G162600 chr2B 75.598 209 36 13 5538 5742 424511377 424511574 1.140000e-13 89.8
57 TraesCS6A01G162600 chr2B 88.000 50 4 2 488 536 96387651 96387603 3.200000e-04 58.4
58 TraesCS6A01G162600 chr2B 88.000 50 4 2 488 536 357949731 357949683 3.200000e-04 58.4
59 TraesCS6A01G162600 chrUn 85.616 146 16 5 4476 4617 79187213 79187069 1.850000e-31 148.0
60 TraesCS6A01G162600 chr5D 78.151 238 39 11 5520 5748 5557726 5557959 1.110000e-28 139.0
61 TraesCS6A01G162600 chr3B 76.596 235 44 10 5514 5746 456547811 456547586 1.450000e-22 119.0
62 TraesCS6A01G162600 chr3B 78.986 138 26 3 5484 5619 201043400 201043536 3.160000e-14 91.6
63 TraesCS6A01G162600 chr5A 81.982 111 17 3 5511 5618 693408691 693408801 3.160000e-14 91.6
64 TraesCS6A01G162600 chr5B 93.023 43 1 2 480 522 542951654 542951694 2.480000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G162600 chr6A 157960554 157968768 8214 True 15171.0000 15171 100.000000 1 8215 1 chr6A.!!$R1 8214
1 TraesCS6A01G162600 chr6D 123154686 123163146 8460 False 3193.2500 5614 94.761000 307 8215 4 chr6D.!!$F2 7908
2 TraesCS6A01G162600 chr6B 217164642 217173089 8447 False 1477.4875 5347 94.616125 635 8215 8 chr6B.!!$F3 7580
3 TraesCS6A01G162600 chr7A 554390245 554394034 3789 False 267.5000 278 78.646000 1041 4420 2 chr7A.!!$F2 3379

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
27 28 0.040067 GCTCCACTTGGCGAGTTTTG 60.040 55.000 4.15 0.0 36.10 2.44 F
297 298 0.107848 CGCCTTAAACCCGGAGACAT 60.108 55.000 0.73 0.0 0.00 3.06 F
734 765 0.253044 GAGGCAACCCACATAGCTCA 59.747 55.000 0.00 0.0 37.17 4.26 F
1439 1475 0.719846 CGTTCGTCGCATTTCGCAAA 60.720 50.000 0.00 0.0 42.60 3.68 F
2225 2617 0.895530 CCGTAGTGGTGTGGATCAGT 59.104 55.000 0.00 0.0 0.00 3.41 F
2569 2979 0.034896 ACTTACCTGGTGGCGTTCTG 59.965 55.000 10.23 0.0 36.63 3.02 F
2913 3323 0.252974 ATACCAGGTACCCCAGTGCA 60.253 55.000 8.74 0.0 0.00 4.57 F
4310 5556 0.620556 TTCAGATGCCCTTGAGGTCC 59.379 55.000 0.00 0.0 38.26 4.46 F
4565 5811 2.867368 GGTACAACACATGTCACGAACA 59.133 45.455 0.00 0.0 42.70 3.18 F
5101 6356 6.485648 GGTTGACTTAGGACAAAGCTAGAAAA 59.514 38.462 0.00 0.0 0.00 2.29 F
6913 8865 0.378962 CGGCGTTGAAACCAAACTCA 59.621 50.000 0.00 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1438 1474 0.037419 GCAATCAAACATGGCGGGTT 60.037 50.000 0.00 0.00 0.00 4.11 R
1844 1967 0.179129 GGCCCGATGCAAATTCAGTG 60.179 55.000 0.00 0.00 43.89 3.66 R
2225 2617 0.394488 TCCGTGTTGCTTTGGGTCAA 60.394 50.000 0.00 0.00 0.00 3.18 R
2387 2782 1.480954 TGATGTTAGAGAAGGTCCGGC 59.519 52.381 0.00 0.00 0.00 6.13 R
4077 5322 1.688735 CCATCGAGAGGAAGCCATGTA 59.311 52.381 0.47 0.00 0.00 2.29 R
4565 5811 1.134699 CACCATGTCGACACCTGCTAT 60.135 52.381 22.71 0.00 0.00 2.97 R
4945 6200 7.069569 CGTTTCTTTTTACTCCGCATATATGG 58.930 38.462 14.51 4.78 0.00 2.74 R
5947 7899 3.581024 TCCACTGCATGAAAAGATTGC 57.419 42.857 0.00 0.00 36.91 3.56 R
5950 7902 5.623824 GCAAAGATCCACTGCATGAAAAGAT 60.624 40.000 0.00 0.00 36.09 2.40 R
7138 9090 1.025113 TTCATCAGAGCAGCAGCAGC 61.025 55.000 3.17 0.46 45.49 5.25 R
7766 9893 4.518211 GCTTCATGTAGCAATAGCCATCTT 59.482 41.667 18.39 0.00 43.56 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.528674 CCGAGATGGCTCCACTTG 57.471 61.111 0.00 0.00 37.91 3.16
18 19 1.153289 CCGAGATGGCTCCACTTGG 60.153 63.158 9.08 9.08 37.91 3.61
19 20 1.817099 CGAGATGGCTCCACTTGGC 60.817 63.158 0.00 0.00 37.91 4.52
20 21 1.817099 GAGATGGCTCCACTTGGCG 60.817 63.158 0.00 0.00 35.01 5.69
21 22 2.244117 GAGATGGCTCCACTTGGCGA 62.244 60.000 0.00 0.00 35.01 5.54
22 23 1.817099 GATGGCTCCACTTGGCGAG 60.817 63.158 0.00 0.00 34.44 5.03
23 24 2.527951 GATGGCTCCACTTGGCGAGT 62.528 60.000 0.18 0.18 39.89 4.18
24 25 2.032681 GGCTCCACTTGGCGAGTT 59.967 61.111 4.15 0.00 36.10 3.01
25 26 1.600916 GGCTCCACTTGGCGAGTTT 60.601 57.895 4.15 0.00 36.10 2.66
26 27 1.172812 GGCTCCACTTGGCGAGTTTT 61.173 55.000 4.15 0.00 36.10 2.43
27 28 0.040067 GCTCCACTTGGCGAGTTTTG 60.040 55.000 4.15 0.00 36.10 2.44
28 29 1.593196 CTCCACTTGGCGAGTTTTGA 58.407 50.000 4.15 1.70 36.10 2.69
29 30 2.154462 CTCCACTTGGCGAGTTTTGAT 58.846 47.619 4.15 0.00 36.10 2.57
30 31 2.554032 CTCCACTTGGCGAGTTTTGATT 59.446 45.455 4.15 0.00 36.10 2.57
31 32 2.293122 TCCACTTGGCGAGTTTTGATTG 59.707 45.455 4.15 0.00 36.10 2.67
32 33 2.607771 CCACTTGGCGAGTTTTGATTGG 60.608 50.000 4.15 0.00 36.10 3.16
33 34 2.293122 CACTTGGCGAGTTTTGATTGGA 59.707 45.455 4.15 0.00 36.10 3.53
34 35 2.293399 ACTTGGCGAGTTTTGATTGGAC 59.707 45.455 0.18 0.00 33.92 4.02
35 36 2.270352 TGGCGAGTTTTGATTGGACT 57.730 45.000 0.00 0.00 0.00 3.85
36 37 3.410631 TGGCGAGTTTTGATTGGACTA 57.589 42.857 0.00 0.00 0.00 2.59
37 38 3.334691 TGGCGAGTTTTGATTGGACTAG 58.665 45.455 0.00 0.00 0.00 2.57
38 39 2.678336 GGCGAGTTTTGATTGGACTAGG 59.322 50.000 0.00 0.00 0.00 3.02
39 40 3.596214 GCGAGTTTTGATTGGACTAGGA 58.404 45.455 0.00 0.00 0.00 2.94
40 41 3.371285 GCGAGTTTTGATTGGACTAGGAC 59.629 47.826 0.00 0.00 0.00 3.85
41 42 3.933332 CGAGTTTTGATTGGACTAGGACC 59.067 47.826 0.00 0.00 0.00 4.46
42 43 4.562757 CGAGTTTTGATTGGACTAGGACCA 60.563 45.833 6.80 6.80 35.47 4.02
49 50 2.561478 TGGACTAGGACCAAACTTGC 57.439 50.000 8.19 0.00 34.25 4.01
50 51 1.771854 TGGACTAGGACCAAACTTGCA 59.228 47.619 8.19 0.00 34.25 4.08
51 52 2.152016 GGACTAGGACCAAACTTGCAC 58.848 52.381 0.00 0.00 0.00 4.57
52 53 2.152016 GACTAGGACCAAACTTGCACC 58.848 52.381 0.00 0.00 0.00 5.01
53 54 1.774856 ACTAGGACCAAACTTGCACCT 59.225 47.619 0.00 9.45 36.61 4.00
54 55 2.224548 ACTAGGACCAAACTTGCACCTC 60.225 50.000 0.00 0.00 35.23 3.85
55 56 0.178990 AGGACCAAACTTGCACCTCC 60.179 55.000 0.00 0.00 30.51 4.30
56 57 0.467290 GGACCAAACTTGCACCTCCA 60.467 55.000 0.00 0.00 0.00 3.86
57 58 1.620822 GACCAAACTTGCACCTCCAT 58.379 50.000 0.00 0.00 0.00 3.41
58 59 1.270550 GACCAAACTTGCACCTCCATG 59.729 52.381 0.00 0.00 0.00 3.66
59 60 1.133513 ACCAAACTTGCACCTCCATGA 60.134 47.619 0.00 0.00 0.00 3.07
60 61 1.270550 CCAAACTTGCACCTCCATGAC 59.729 52.381 0.00 0.00 0.00 3.06
61 62 1.955778 CAAACTTGCACCTCCATGACA 59.044 47.619 0.00 0.00 0.00 3.58
62 63 2.361757 CAAACTTGCACCTCCATGACAA 59.638 45.455 0.00 0.00 0.00 3.18
63 64 1.901591 ACTTGCACCTCCATGACAAG 58.098 50.000 0.00 0.00 38.54 3.16
64 65 1.143684 ACTTGCACCTCCATGACAAGT 59.856 47.619 0.00 0.00 39.72 3.16
65 66 2.233271 CTTGCACCTCCATGACAAGTT 58.767 47.619 0.00 0.00 33.12 2.66
66 67 1.608055 TGCACCTCCATGACAAGTTG 58.392 50.000 0.00 0.00 0.00 3.16
67 68 1.142667 TGCACCTCCATGACAAGTTGA 59.857 47.619 10.54 0.00 0.00 3.18
68 69 2.229792 GCACCTCCATGACAAGTTGAA 58.770 47.619 10.54 0.00 0.00 2.69
69 70 2.227388 GCACCTCCATGACAAGTTGAAG 59.773 50.000 10.54 0.00 0.00 3.02
70 71 2.816087 CACCTCCATGACAAGTTGAAGG 59.184 50.000 10.54 8.39 0.00 3.46
71 72 2.711009 ACCTCCATGACAAGTTGAAGGA 59.289 45.455 10.54 9.54 0.00 3.36
72 73 3.331889 ACCTCCATGACAAGTTGAAGGAT 59.668 43.478 10.54 0.00 0.00 3.24
73 74 3.693085 CCTCCATGACAAGTTGAAGGATG 59.307 47.826 10.54 5.68 0.00 3.51
74 75 4.566278 CCTCCATGACAAGTTGAAGGATGA 60.566 45.833 10.54 0.00 0.00 2.92
75 76 4.984295 TCCATGACAAGTTGAAGGATGAA 58.016 39.130 10.54 0.00 0.00 2.57
76 77 5.384336 TCCATGACAAGTTGAAGGATGAAA 58.616 37.500 10.54 0.00 0.00 2.69
77 78 6.012113 TCCATGACAAGTTGAAGGATGAAAT 58.988 36.000 10.54 0.00 0.00 2.17
78 79 7.174413 TCCATGACAAGTTGAAGGATGAAATA 58.826 34.615 10.54 0.00 0.00 1.40
79 80 7.669304 TCCATGACAAGTTGAAGGATGAAATAA 59.331 33.333 10.54 0.00 0.00 1.40
80 81 8.472413 CCATGACAAGTTGAAGGATGAAATAAT 58.528 33.333 10.54 0.00 0.00 1.28
81 82 9.512435 CATGACAAGTTGAAGGATGAAATAATC 57.488 33.333 10.54 0.00 0.00 1.75
82 83 8.634335 TGACAAGTTGAAGGATGAAATAATCA 57.366 30.769 10.54 0.00 43.67 2.57
83 84 8.733458 TGACAAGTTGAAGGATGAAATAATCAG 58.267 33.333 10.54 0.00 42.53 2.90
84 85 7.542025 ACAAGTTGAAGGATGAAATAATCAGC 58.458 34.615 10.54 0.00 42.53 4.26
85 86 7.395489 ACAAGTTGAAGGATGAAATAATCAGCT 59.605 33.333 10.54 0.00 44.01 4.24
86 87 7.951347 AGTTGAAGGATGAAATAATCAGCTT 57.049 32.000 0.00 0.00 44.01 3.74
87 88 8.358582 AGTTGAAGGATGAAATAATCAGCTTT 57.641 30.769 0.00 0.00 45.17 3.51
88 89 8.810041 AGTTGAAGGATGAAATAATCAGCTTTT 58.190 29.630 0.00 0.00 42.91 2.27
89 90 9.428097 GTTGAAGGATGAAATAATCAGCTTTTT 57.572 29.630 0.00 0.00 42.91 1.94
90 91 9.643693 TTGAAGGATGAAATAATCAGCTTTTTC 57.356 29.630 0.00 0.00 42.91 2.29
91 92 8.805175 TGAAGGATGAAATAATCAGCTTTTTCA 58.195 29.630 0.00 0.00 42.91 2.69
92 93 9.643693 GAAGGATGAAATAATCAGCTTTTTCAA 57.356 29.630 8.64 0.00 42.91 2.69
93 94 9.649167 AAGGATGAAATAATCAGCTTTTTCAAG 57.351 29.630 8.64 0.00 40.39 3.02
94 95 8.810041 AGGATGAAATAATCAGCTTTTTCAAGT 58.190 29.630 8.64 0.00 44.01 3.16
95 96 9.428097 GGATGAAATAATCAGCTTTTTCAAGTT 57.572 29.630 8.64 0.00 44.01 2.66
102 103 9.914131 ATAATCAGCTTTTTCAAGTTTAAGGAC 57.086 29.630 0.00 0.00 31.86 3.85
103 104 6.144078 TCAGCTTTTTCAAGTTTAAGGACC 57.856 37.500 0.00 0.00 31.86 4.46
104 105 5.654650 TCAGCTTTTTCAAGTTTAAGGACCA 59.345 36.000 0.00 0.00 31.86 4.02
105 106 6.153680 TCAGCTTTTTCAAGTTTAAGGACCAA 59.846 34.615 0.00 0.00 31.86 3.67
106 107 6.816140 CAGCTTTTTCAAGTTTAAGGACCAAA 59.184 34.615 0.00 0.00 31.86 3.28
107 108 6.816640 AGCTTTTTCAAGTTTAAGGACCAAAC 59.183 34.615 0.00 0.00 36.37 2.93
108 109 6.036735 GCTTTTTCAAGTTTAAGGACCAAACC 59.963 38.462 4.27 0.00 36.71 3.27
109 110 6.607004 TTTTCAAGTTTAAGGACCAAACCA 57.393 33.333 4.27 0.00 36.71 3.67
110 111 6.800072 TTTCAAGTTTAAGGACCAAACCAT 57.200 33.333 4.27 0.00 36.71 3.55
111 112 6.399639 TTCAAGTTTAAGGACCAAACCATC 57.600 37.500 4.27 0.00 36.71 3.51
112 113 5.450453 TCAAGTTTAAGGACCAAACCATCA 58.550 37.500 4.27 0.00 36.71 3.07
113 114 5.300792 TCAAGTTTAAGGACCAAACCATCAC 59.699 40.000 4.27 0.00 36.71 3.06
114 115 4.149598 AGTTTAAGGACCAAACCATCACC 58.850 43.478 4.27 0.00 36.71 4.02
115 116 4.141018 AGTTTAAGGACCAAACCATCACCT 60.141 41.667 4.27 0.00 36.71 4.00
116 117 2.586648 AAGGACCAAACCATCACCTC 57.413 50.000 0.00 0.00 0.00 3.85
117 118 0.698818 AGGACCAAACCATCACCTCC 59.301 55.000 0.00 0.00 0.00 4.30
118 119 0.404040 GGACCAAACCATCACCTCCA 59.596 55.000 0.00 0.00 0.00 3.86
119 120 1.005924 GGACCAAACCATCACCTCCAT 59.994 52.381 0.00 0.00 0.00 3.41
120 121 2.094675 GACCAAACCATCACCTCCATG 58.905 52.381 0.00 0.00 0.00 3.66
121 122 1.710244 ACCAAACCATCACCTCCATGA 59.290 47.619 0.00 0.00 0.00 3.07
122 123 2.094675 CCAAACCATCACCTCCATGAC 58.905 52.381 0.00 0.00 0.00 3.06
123 124 2.555006 CCAAACCATCACCTCCATGACA 60.555 50.000 0.00 0.00 0.00 3.58
124 125 3.156293 CAAACCATCACCTCCATGACAA 58.844 45.455 0.00 0.00 0.00 3.18
125 126 2.795231 ACCATCACCTCCATGACAAG 57.205 50.000 0.00 0.00 0.00 3.16
126 127 1.988107 ACCATCACCTCCATGACAAGT 59.012 47.619 0.00 0.00 0.00 3.16
127 128 2.376518 ACCATCACCTCCATGACAAGTT 59.623 45.455 0.00 0.00 0.00 2.66
128 129 3.012518 CCATCACCTCCATGACAAGTTC 58.987 50.000 0.00 0.00 0.00 3.01
129 130 3.559811 CCATCACCTCCATGACAAGTTCA 60.560 47.826 0.00 0.00 39.11 3.18
130 131 3.407424 TCACCTCCATGACAAGTTCAG 57.593 47.619 0.00 0.00 37.77 3.02
131 132 2.038952 TCACCTCCATGACAAGTTCAGG 59.961 50.000 0.00 0.00 37.77 3.86
136 137 2.867109 CATGACAAGTTCAGGGACCT 57.133 50.000 0.00 0.00 37.77 3.85
137 138 2.430465 CATGACAAGTTCAGGGACCTG 58.570 52.381 12.16 12.16 44.86 4.00
138 139 1.507140 TGACAAGTTCAGGGACCTGT 58.493 50.000 17.34 0.00 43.96 4.00
139 140 1.140852 TGACAAGTTCAGGGACCTGTG 59.859 52.381 17.34 10.95 43.96 3.66
140 141 0.474184 ACAAGTTCAGGGACCTGTGG 59.526 55.000 17.34 6.99 43.96 4.17
141 142 0.474184 CAAGTTCAGGGACCTGTGGT 59.526 55.000 17.34 1.37 43.96 4.16
142 143 0.474184 AAGTTCAGGGACCTGTGGTG 59.526 55.000 17.34 0.00 43.96 4.17
143 144 1.600916 GTTCAGGGACCTGTGGTGC 60.601 63.158 17.34 0.00 43.47 5.01
144 145 1.770110 TTCAGGGACCTGTGGTGCT 60.770 57.895 17.34 0.00 43.70 4.40
145 146 0.472925 TTCAGGGACCTGTGGTGCTA 60.473 55.000 17.34 0.00 43.70 3.49
146 147 0.252696 TCAGGGACCTGTGGTGCTAT 60.253 55.000 17.34 0.00 43.70 2.97
147 148 0.620556 CAGGGACCTGTGGTGCTATT 59.379 55.000 10.22 0.00 43.70 1.73
148 149 1.837439 CAGGGACCTGTGGTGCTATTA 59.163 52.381 10.22 0.00 43.70 0.98
149 150 1.838077 AGGGACCTGTGGTGCTATTAC 59.162 52.381 8.09 0.00 43.70 1.89
150 151 1.134189 GGGACCTGTGGTGCTATTACC 60.134 57.143 8.09 0.00 43.70 2.85
151 152 1.838077 GGACCTGTGGTGCTATTACCT 59.162 52.381 0.94 0.00 40.95 3.08
152 153 2.158943 GGACCTGTGGTGCTATTACCTC 60.159 54.545 0.94 0.00 40.95 3.85
153 154 2.766828 GACCTGTGGTGCTATTACCTCT 59.233 50.000 0.00 0.00 41.43 3.69
154 155 3.182152 ACCTGTGGTGCTATTACCTCTT 58.818 45.455 0.00 0.00 41.43 2.85
155 156 3.197983 ACCTGTGGTGCTATTACCTCTTC 59.802 47.826 0.00 0.00 41.43 2.87
156 157 3.197766 CCTGTGGTGCTATTACCTCTTCA 59.802 47.826 0.00 0.00 41.43 3.02
157 158 4.141620 CCTGTGGTGCTATTACCTCTTCAT 60.142 45.833 0.00 0.00 41.43 2.57
158 159 5.070446 CCTGTGGTGCTATTACCTCTTCATA 59.930 44.000 0.00 0.00 41.43 2.15
159 160 6.239714 CCTGTGGTGCTATTACCTCTTCATAT 60.240 42.308 0.00 0.00 41.43 1.78
160 161 7.136822 TGTGGTGCTATTACCTCTTCATATT 57.863 36.000 0.00 0.00 41.43 1.28
161 162 7.573710 TGTGGTGCTATTACCTCTTCATATTT 58.426 34.615 0.00 0.00 41.43 1.40
162 163 8.052748 TGTGGTGCTATTACCTCTTCATATTTT 58.947 33.333 0.00 0.00 41.43 1.82
163 164 8.345565 GTGGTGCTATTACCTCTTCATATTTTG 58.654 37.037 0.00 0.00 41.43 2.44
164 165 7.502226 TGGTGCTATTACCTCTTCATATTTTGG 59.498 37.037 0.00 0.00 41.43 3.28
165 166 7.502561 GGTGCTATTACCTCTTCATATTTTGGT 59.497 37.037 0.00 0.00 37.74 3.67
166 167 8.560374 GTGCTATTACCTCTTCATATTTTGGTC 58.440 37.037 0.00 0.00 0.00 4.02
167 168 8.494433 TGCTATTACCTCTTCATATTTTGGTCT 58.506 33.333 0.00 0.00 0.00 3.85
168 169 9.343539 GCTATTACCTCTTCATATTTTGGTCTT 57.656 33.333 0.00 0.00 0.00 3.01
174 175 9.588096 ACCTCTTCATATTTTGGTCTTTTTAGT 57.412 29.630 0.00 0.00 0.00 2.24
184 185 9.946165 ATTTTGGTCTTTTTAGTTCTTTAGTCG 57.054 29.630 0.00 0.00 0.00 4.18
185 186 7.486802 TTGGTCTTTTTAGTTCTTTAGTCGG 57.513 36.000 0.00 0.00 0.00 4.79
186 187 5.467735 TGGTCTTTTTAGTTCTTTAGTCGGC 59.532 40.000 0.00 0.00 0.00 5.54
187 188 5.467735 GGTCTTTTTAGTTCTTTAGTCGGCA 59.532 40.000 0.00 0.00 0.00 5.69
188 189 6.017687 GGTCTTTTTAGTTCTTTAGTCGGCAA 60.018 38.462 0.00 0.00 0.00 4.52
189 190 7.412063 GTCTTTTTAGTTCTTTAGTCGGCAAA 58.588 34.615 0.00 0.00 0.00 3.68
190 191 7.586664 GTCTTTTTAGTTCTTTAGTCGGCAAAG 59.413 37.037 5.83 5.83 34.87 2.77
191 192 5.352643 TTTAGTTCTTTAGTCGGCAAAGC 57.647 39.130 6.96 0.00 33.82 3.51
192 193 2.846193 AGTTCTTTAGTCGGCAAAGCA 58.154 42.857 6.96 0.00 33.82 3.91
193 194 3.412386 AGTTCTTTAGTCGGCAAAGCAT 58.588 40.909 6.96 0.00 33.82 3.79
194 195 3.189287 AGTTCTTTAGTCGGCAAAGCATG 59.811 43.478 6.96 0.00 33.82 4.06
195 196 2.778299 TCTTTAGTCGGCAAAGCATGT 58.222 42.857 6.96 0.00 33.82 3.21
196 197 3.146066 TCTTTAGTCGGCAAAGCATGTT 58.854 40.909 6.96 0.00 33.82 2.71
197 198 3.188460 TCTTTAGTCGGCAAAGCATGTTC 59.812 43.478 6.96 0.00 33.82 3.18
198 199 2.177394 TAGTCGGCAAAGCATGTTCA 57.823 45.000 0.00 0.00 0.00 3.18
199 200 1.317613 AGTCGGCAAAGCATGTTCAA 58.682 45.000 0.00 0.00 0.00 2.69
200 201 1.001378 AGTCGGCAAAGCATGTTCAAC 60.001 47.619 0.00 0.00 0.00 3.18
201 202 1.001378 GTCGGCAAAGCATGTTCAACT 60.001 47.619 0.00 0.00 0.00 3.16
202 203 1.680735 TCGGCAAAGCATGTTCAACTT 59.319 42.857 0.00 0.00 0.00 2.66
203 204 2.100584 TCGGCAAAGCATGTTCAACTTT 59.899 40.909 0.00 0.00 34.03 2.66
207 208 4.680934 CAAAGCATGTTCAACTTTGTCG 57.319 40.909 16.47 0.00 43.28 4.35
208 209 3.354089 AAGCATGTTCAACTTTGTCGG 57.646 42.857 0.00 0.00 0.00 4.79
209 210 1.608590 AGCATGTTCAACTTTGTCGGG 59.391 47.619 0.00 0.00 0.00 5.14
210 211 1.606668 GCATGTTCAACTTTGTCGGGA 59.393 47.619 0.00 0.00 0.00 5.14
211 212 2.034053 GCATGTTCAACTTTGTCGGGAA 59.966 45.455 0.00 0.00 0.00 3.97
212 213 3.853307 GCATGTTCAACTTTGTCGGGAAG 60.853 47.826 0.00 0.00 0.00 3.46
213 214 1.673920 TGTTCAACTTTGTCGGGAAGC 59.326 47.619 0.00 0.00 0.00 3.86
214 215 1.947456 GTTCAACTTTGTCGGGAAGCT 59.053 47.619 0.00 0.00 0.00 3.74
215 216 3.135994 GTTCAACTTTGTCGGGAAGCTA 58.864 45.455 0.00 0.00 0.00 3.32
216 217 3.040147 TCAACTTTGTCGGGAAGCTAG 57.960 47.619 0.00 0.00 0.00 3.42
217 218 2.367567 TCAACTTTGTCGGGAAGCTAGT 59.632 45.455 0.00 0.00 0.00 2.57
218 219 2.457366 ACTTTGTCGGGAAGCTAGTG 57.543 50.000 0.00 0.00 0.00 2.74
219 220 1.968493 ACTTTGTCGGGAAGCTAGTGA 59.032 47.619 0.00 0.00 0.00 3.41
220 221 2.028930 ACTTTGTCGGGAAGCTAGTGAG 60.029 50.000 0.00 0.00 0.00 3.51
221 222 0.895530 TTGTCGGGAAGCTAGTGAGG 59.104 55.000 0.00 0.00 0.00 3.86
222 223 0.251653 TGTCGGGAAGCTAGTGAGGT 60.252 55.000 0.00 0.00 33.85 3.85
223 224 1.005097 TGTCGGGAAGCTAGTGAGGTA 59.995 52.381 0.00 0.00 31.56 3.08
224 225 2.097825 GTCGGGAAGCTAGTGAGGTAA 58.902 52.381 0.00 0.00 31.56 2.85
225 226 2.099427 GTCGGGAAGCTAGTGAGGTAAG 59.901 54.545 0.00 0.00 31.56 2.34
226 227 1.409427 CGGGAAGCTAGTGAGGTAAGG 59.591 57.143 0.00 0.00 31.56 2.69
227 228 2.468915 GGGAAGCTAGTGAGGTAAGGT 58.531 52.381 0.00 0.00 31.56 3.50
228 229 2.431419 GGGAAGCTAGTGAGGTAAGGTC 59.569 54.545 0.00 0.00 31.56 3.85
229 230 3.367321 GGAAGCTAGTGAGGTAAGGTCT 58.633 50.000 0.00 0.00 31.56 3.85
230 231 3.382227 GGAAGCTAGTGAGGTAAGGTCTC 59.618 52.174 0.00 0.00 31.56 3.36
231 232 3.021177 AGCTAGTGAGGTAAGGTCTCC 57.979 52.381 0.00 0.00 0.00 3.71
232 233 2.583566 AGCTAGTGAGGTAAGGTCTCCT 59.416 50.000 0.00 0.00 36.70 3.69
233 234 3.011934 AGCTAGTGAGGTAAGGTCTCCTT 59.988 47.826 6.30 6.30 46.63 3.36
234 235 3.131400 GCTAGTGAGGTAAGGTCTCCTTG 59.869 52.174 10.82 0.00 44.44 3.61
235 236 2.541466 AGTGAGGTAAGGTCTCCTTGG 58.459 52.381 10.82 0.00 44.44 3.61
236 237 2.158143 AGTGAGGTAAGGTCTCCTTGGT 60.158 50.000 10.82 0.00 44.44 3.67
237 238 2.234168 GTGAGGTAAGGTCTCCTTGGTC 59.766 54.545 10.82 5.75 44.44 4.02
238 239 1.832366 GAGGTAAGGTCTCCTTGGTCC 59.168 57.143 10.82 9.98 44.44 4.46
239 240 1.437547 AGGTAAGGTCTCCTTGGTCCT 59.562 52.381 10.82 11.66 44.44 3.85
240 241 1.555533 GGTAAGGTCTCCTTGGTCCTG 59.444 57.143 10.82 0.00 44.44 3.86
241 242 2.258109 GTAAGGTCTCCTTGGTCCTGT 58.742 52.381 10.82 0.00 44.44 4.00
242 243 1.821088 AAGGTCTCCTTGGTCCTGTT 58.179 50.000 0.00 0.00 42.96 3.16
243 244 1.821088 AGGTCTCCTTGGTCCTGTTT 58.179 50.000 0.00 0.00 0.00 2.83
244 245 1.421646 AGGTCTCCTTGGTCCTGTTTG 59.578 52.381 0.00 0.00 0.00 2.93
245 246 1.545651 GGTCTCCTTGGTCCTGTTTGG 60.546 57.143 0.00 0.00 37.10 3.28
246 247 0.110486 TCTCCTTGGTCCTGTTTGGC 59.890 55.000 0.00 0.00 35.26 4.52
247 248 0.111253 CTCCTTGGTCCTGTTTGGCT 59.889 55.000 0.00 0.00 35.26 4.75
248 249 0.178992 TCCTTGGTCCTGTTTGGCTG 60.179 55.000 0.00 0.00 35.26 4.85
249 250 1.181098 CCTTGGTCCTGTTTGGCTGG 61.181 60.000 0.00 0.00 37.52 4.85
250 251 0.178992 CTTGGTCCTGTTTGGCTGGA 60.179 55.000 0.00 0.00 42.01 3.86
251 252 0.482446 TTGGTCCTGTTTGGCTGGAT 59.518 50.000 0.00 0.00 45.14 3.41
252 253 1.367346 TGGTCCTGTTTGGCTGGATA 58.633 50.000 0.00 0.00 45.14 2.59
253 254 1.922447 TGGTCCTGTTTGGCTGGATAT 59.078 47.619 0.00 0.00 45.14 1.63
254 255 2.301346 GGTCCTGTTTGGCTGGATATG 58.699 52.381 0.00 0.00 45.14 1.78
255 256 2.301346 GTCCTGTTTGGCTGGATATGG 58.699 52.381 0.00 0.00 45.14 2.74
256 257 1.215173 TCCTGTTTGGCTGGATATGGG 59.785 52.381 0.00 0.00 39.82 4.00
257 258 1.215173 CCTGTTTGGCTGGATATGGGA 59.785 52.381 0.00 0.00 38.33 4.37
258 259 2.158415 CCTGTTTGGCTGGATATGGGAT 60.158 50.000 0.00 0.00 38.33 3.85
259 260 2.889045 CTGTTTGGCTGGATATGGGATG 59.111 50.000 0.00 0.00 0.00 3.51
260 261 2.242043 GTTTGGCTGGATATGGGATGG 58.758 52.381 0.00 0.00 0.00 3.51
261 262 1.533187 TTGGCTGGATATGGGATGGT 58.467 50.000 0.00 0.00 0.00 3.55
262 263 1.533187 TGGCTGGATATGGGATGGTT 58.467 50.000 0.00 0.00 0.00 3.67
263 264 1.425066 TGGCTGGATATGGGATGGTTC 59.575 52.381 0.00 0.00 0.00 3.62
264 265 1.707427 GGCTGGATATGGGATGGTTCT 59.293 52.381 0.00 0.00 0.00 3.01
265 266 2.290577 GGCTGGATATGGGATGGTTCTC 60.291 54.545 0.00 0.00 0.00 2.87
266 267 2.641815 GCTGGATATGGGATGGTTCTCT 59.358 50.000 0.00 0.00 0.00 3.10
267 268 3.840666 GCTGGATATGGGATGGTTCTCTA 59.159 47.826 0.00 0.00 0.00 2.43
268 269 4.081198 GCTGGATATGGGATGGTTCTCTAG 60.081 50.000 0.00 0.00 0.00 2.43
269 270 3.840666 TGGATATGGGATGGTTCTCTAGC 59.159 47.826 0.00 0.00 0.00 3.42
270 271 3.198853 GGATATGGGATGGTTCTCTAGCC 59.801 52.174 0.00 0.00 0.00 3.93
272 273 2.146779 GGGATGGTTCTCTAGCCCC 58.853 63.158 0.00 0.00 43.60 5.80
273 274 0.400670 GGGATGGTTCTCTAGCCCCT 60.401 60.000 0.00 0.00 43.60 4.79
274 275 1.512735 GGATGGTTCTCTAGCCCCTT 58.487 55.000 0.00 0.00 0.00 3.95
275 276 1.418264 GGATGGTTCTCTAGCCCCTTC 59.582 57.143 0.00 0.00 0.00 3.46
276 277 2.119495 GATGGTTCTCTAGCCCCTTCA 58.881 52.381 0.00 0.00 0.00 3.02
277 278 1.276622 TGGTTCTCTAGCCCCTTCAC 58.723 55.000 0.00 0.00 0.00 3.18
278 279 0.542333 GGTTCTCTAGCCCCTTCACC 59.458 60.000 0.00 0.00 0.00 4.02
279 280 0.175989 GTTCTCTAGCCCCTTCACCG 59.824 60.000 0.00 0.00 0.00 4.94
280 281 1.614241 TTCTCTAGCCCCTTCACCGC 61.614 60.000 0.00 0.00 0.00 5.68
281 282 3.081409 TCTAGCCCCTTCACCGCC 61.081 66.667 0.00 0.00 0.00 6.13
282 283 3.083997 CTAGCCCCTTCACCGCCT 61.084 66.667 0.00 0.00 0.00 5.52
283 284 2.609610 TAGCCCCTTCACCGCCTT 60.610 61.111 0.00 0.00 0.00 4.35
284 285 1.306312 TAGCCCCTTCACCGCCTTA 60.306 57.895 0.00 0.00 0.00 2.69
285 286 0.910566 TAGCCCCTTCACCGCCTTAA 60.911 55.000 0.00 0.00 0.00 1.85
286 287 1.303806 GCCCCTTCACCGCCTTAAA 60.304 57.895 0.00 0.00 0.00 1.52
287 288 1.592400 GCCCCTTCACCGCCTTAAAC 61.592 60.000 0.00 0.00 0.00 2.01
288 289 0.963856 CCCCTTCACCGCCTTAAACC 60.964 60.000 0.00 0.00 0.00 3.27
289 290 0.963856 CCCTTCACCGCCTTAAACCC 60.964 60.000 0.00 0.00 0.00 4.11
290 291 1.303091 CCTTCACCGCCTTAAACCCG 61.303 60.000 0.00 0.00 0.00 5.28
291 292 1.302671 TTCACCGCCTTAAACCCGG 60.303 57.895 0.00 0.00 46.97 5.73
292 293 1.766625 TTCACCGCCTTAAACCCGGA 61.767 55.000 0.73 0.00 44.55 5.14
293 294 1.743995 CACCGCCTTAAACCCGGAG 60.744 63.158 0.73 0.00 44.55 4.63
294 295 1.914764 ACCGCCTTAAACCCGGAGA 60.915 57.895 0.73 0.00 44.55 3.71
295 296 1.449070 CCGCCTTAAACCCGGAGAC 60.449 63.158 0.73 0.00 44.55 3.36
296 297 1.294138 CGCCTTAAACCCGGAGACA 59.706 57.895 0.73 0.00 0.00 3.41
297 298 0.107848 CGCCTTAAACCCGGAGACAT 60.108 55.000 0.73 0.00 0.00 3.06
298 299 1.379527 GCCTTAAACCCGGAGACATG 58.620 55.000 0.73 0.00 0.00 3.21
299 300 1.065709 GCCTTAAACCCGGAGACATGA 60.066 52.381 0.73 0.00 0.00 3.07
300 301 2.421529 GCCTTAAACCCGGAGACATGAT 60.422 50.000 0.73 0.00 0.00 2.45
301 302 3.886123 CCTTAAACCCGGAGACATGATT 58.114 45.455 0.73 0.00 0.00 2.57
302 303 4.270008 CCTTAAACCCGGAGACATGATTT 58.730 43.478 0.73 0.00 0.00 2.17
303 304 4.096382 CCTTAAACCCGGAGACATGATTTG 59.904 45.833 0.73 0.00 0.00 2.32
304 305 3.433306 AAACCCGGAGACATGATTTGA 57.567 42.857 0.73 0.00 0.00 2.69
305 306 3.652057 AACCCGGAGACATGATTTGAT 57.348 42.857 0.73 0.00 0.00 2.57
306 307 3.199880 ACCCGGAGACATGATTTGATC 57.800 47.619 0.73 0.00 0.00 2.92
307 308 2.158755 ACCCGGAGACATGATTTGATCC 60.159 50.000 0.73 0.00 33.83 3.36
308 309 2.105477 CCCGGAGACATGATTTGATCCT 59.895 50.000 0.73 0.00 34.53 3.24
309 310 3.397482 CCGGAGACATGATTTGATCCTC 58.603 50.000 0.00 0.00 34.53 3.71
310 311 3.055591 CGGAGACATGATTTGATCCTCG 58.944 50.000 0.00 0.00 34.53 4.63
311 312 3.243535 CGGAGACATGATTTGATCCTCGA 60.244 47.826 0.00 0.00 34.53 4.04
312 313 4.560311 CGGAGACATGATTTGATCCTCGAT 60.560 45.833 0.00 0.00 34.53 3.59
313 314 5.303971 GGAGACATGATTTGATCCTCGATT 58.696 41.667 0.00 0.00 34.14 3.34
314 315 5.407995 GGAGACATGATTTGATCCTCGATTC 59.592 44.000 0.00 0.00 34.14 2.52
315 316 4.987285 AGACATGATTTGATCCTCGATTCG 59.013 41.667 0.00 0.00 0.00 3.34
322 323 2.876091 TGATCCTCGATTCGTTGTCAC 58.124 47.619 5.89 0.00 0.00 3.67
325 326 1.341852 TCCTCGATTCGTTGTCACCAA 59.658 47.619 5.89 0.00 0.00 3.67
332 333 0.542333 TCGTTGTCACCAAACTCCCA 59.458 50.000 0.00 0.00 30.94 4.37
334 335 1.029681 GTTGTCACCAAACTCCCACC 58.970 55.000 0.00 0.00 30.94 4.61
340 341 1.613437 CACCAAACTCCCACCATCAAC 59.387 52.381 0.00 0.00 0.00 3.18
377 386 1.535462 CAACAAAGGTACCTTGGCTCG 59.465 52.381 27.75 15.44 36.26 5.03
378 387 1.053424 ACAAAGGTACCTTGGCTCGA 58.947 50.000 27.75 0.00 36.26 4.04
423 432 4.156008 GGTGGTATTGAACTTTGCTAGGTG 59.844 45.833 0.00 0.00 0.00 4.00
434 443 1.211969 GCTAGGTGCGTCGTCAAGA 59.788 57.895 0.00 0.00 0.00 3.02
454 472 3.118261 AGAAGTGCAGGAGAAAGACAACA 60.118 43.478 0.00 0.00 0.00 3.33
462 480 5.410924 CAGGAGAAAGACAACATCGACATA 58.589 41.667 0.00 0.00 0.00 2.29
468 486 7.036220 AGAAAGACAACATCGACATACCTAAG 58.964 38.462 0.00 0.00 0.00 2.18
475 493 4.649674 ACATCGACATACCTAAGGACATGT 59.350 41.667 0.00 0.00 35.70 3.21
503 521 7.677454 TTTTTATTTTCTACTCCCTCCGTTC 57.323 36.000 0.00 0.00 0.00 3.95
524 554 6.575942 CGTTCCTAAATGTAAGACGTTTTTGG 59.424 38.462 0.00 0.00 38.23 3.28
526 556 5.766174 TCCTAAATGTAAGACGTTTTTGGCT 59.234 36.000 0.00 0.00 38.23 4.75
530 560 4.705337 TGTAAGACGTTTTTGGCTGTTT 57.295 36.364 0.00 0.00 0.00 2.83
534 564 7.928103 TGTAAGACGTTTTTGGCTGTTTAATA 58.072 30.769 0.00 0.00 0.00 0.98
547 577 7.428020 TGGCTGTTTAATATAGGTAGTACGTG 58.572 38.462 0.00 0.00 0.00 4.49
548 578 6.364435 GGCTGTTTAATATAGGTAGTACGTGC 59.636 42.308 0.00 0.00 0.00 5.34
549 579 6.919662 GCTGTTTAATATAGGTAGTACGTGCA 59.080 38.462 6.38 0.00 0.00 4.57
563 593 7.691050 GGTAGTACGTGCATTTTAAGAATGTTC 59.309 37.037 6.38 0.00 0.00 3.18
569 599 8.015658 ACGTGCATTTTAAGAATGTTCTTAGAC 58.984 33.333 13.22 5.76 46.84 2.59
663 693 8.986929 AAATAGCTTTATCTGAATTAGGCACT 57.013 30.769 0.00 0.00 46.37 4.40
664 694 8.986929 AATAGCTTTATCTGAATTAGGCACTT 57.013 30.769 0.00 0.00 41.75 3.16
676 706 8.450578 TGAATTAGGCACTTATTATCAGGTTG 57.549 34.615 0.00 0.00 37.84 3.77
734 765 0.253044 GAGGCAACCCACATAGCTCA 59.747 55.000 0.00 0.00 37.17 4.26
758 789 1.065600 CCTGCAACGTGTTTGGTGG 59.934 57.895 0.00 0.00 35.51 4.61
872 903 1.200020 GCCTCTCCAATTCAAACGGTG 59.800 52.381 0.00 0.00 0.00 4.94
888 919 4.113815 TGGCGGGCAATCCTCTGG 62.114 66.667 0.01 0.00 0.00 3.86
987 1023 4.439901 GCCTCCCCCTTCCCCTCT 62.440 72.222 0.00 0.00 0.00 3.69
1421 1457 3.717350 GGTACAACCTTCATTCGTTCG 57.283 47.619 0.00 0.00 34.73 3.95
1422 1458 3.062042 GGTACAACCTTCATTCGTTCGT 58.938 45.455 0.00 0.00 34.73 3.85
1423 1459 3.495753 GGTACAACCTTCATTCGTTCGTT 59.504 43.478 0.00 0.00 34.73 3.85
1438 1474 1.154745 CGTTCGTCGCATTTCGCAA 60.155 52.632 0.00 0.00 42.60 4.85
1439 1475 0.719846 CGTTCGTCGCATTTCGCAAA 60.720 50.000 0.00 0.00 42.60 3.68
1473 1509 5.801350 TGATTGCTTTAGATGTTTCCGAG 57.199 39.130 0.00 0.00 0.00 4.63
1528 1583 3.670625 TGAAATGTACTCCCTCCGTTTG 58.329 45.455 0.00 0.00 0.00 2.93
1529 1584 2.781681 AATGTACTCCCTCCGTTTGG 57.218 50.000 0.00 0.00 0.00 3.28
1535 1590 3.345508 ACTCCCTCCGTTTGGAATTAC 57.654 47.619 0.00 0.00 45.87 1.89
1542 1597 4.083484 CCTCCGTTTGGAATTACTTGTCAC 60.083 45.833 0.00 0.00 45.87 3.67
1543 1598 4.452825 TCCGTTTGGAATTACTTGTCACA 58.547 39.130 0.00 0.00 42.85 3.58
1544 1599 4.513692 TCCGTTTGGAATTACTTGTCACAG 59.486 41.667 0.00 0.00 42.85 3.66
1545 1600 4.513692 CCGTTTGGAATTACTTGTCACAGA 59.486 41.667 0.00 0.00 37.49 3.41
1557 1636 6.992063 ACTTGTCACAGAAATGGATGTATC 57.008 37.500 0.00 0.00 0.00 2.24
1599 1712 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
1602 1715 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
1605 1718 7.752695 ACATCCATTTTCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
1606 1719 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
1607 1720 5.350365 TCCATTTTCGAGACAAGTAATTCCG 59.650 40.000 0.00 0.00 0.00 4.30
1616 1729 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1617 1730 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1618 1731 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1625 1738 1.171308 CGAACGGAGGGAGTAGTCAA 58.829 55.000 0.00 0.00 0.00 3.18
1627 1740 2.444421 GAACGGAGGGAGTAGTCAAGA 58.556 52.381 0.00 0.00 0.00 3.02
1632 1745 5.209659 ACGGAGGGAGTAGTCAAGATAAAT 58.790 41.667 0.00 0.00 0.00 1.40
1682 1797 3.334583 TGAGCATCCTGTCCTGTTTAC 57.665 47.619 0.00 0.00 0.00 2.01
1737 1860 2.288395 GCTGTTCAAATTGGGTGTCAGG 60.288 50.000 0.00 0.00 0.00 3.86
1783 1906 5.899299 TCCGAGAAGTTTGCTAAGGTATAC 58.101 41.667 0.00 0.00 0.00 1.47
1784 1907 4.738740 CCGAGAAGTTTGCTAAGGTATACG 59.261 45.833 0.00 0.00 0.00 3.06
1785 1908 5.338365 CGAGAAGTTTGCTAAGGTATACGT 58.662 41.667 0.00 0.00 0.00 3.57
1786 1909 6.458751 CCGAGAAGTTTGCTAAGGTATACGTA 60.459 42.308 0.00 0.00 0.00 3.57
1787 1910 6.413235 CGAGAAGTTTGCTAAGGTATACGTAC 59.587 42.308 0.00 0.00 0.00 3.67
1788 1911 7.161773 AGAAGTTTGCTAAGGTATACGTACA 57.838 36.000 0.00 0.00 32.25 2.90
1789 1912 7.031975 AGAAGTTTGCTAAGGTATACGTACAC 58.968 38.462 0.00 0.00 32.25 2.90
1790 1913 6.521151 AGTTTGCTAAGGTATACGTACACT 57.479 37.500 3.68 0.00 32.25 3.55
1791 1914 6.558909 AGTTTGCTAAGGTATACGTACACTC 58.441 40.000 3.68 0.00 32.25 3.51
1792 1915 5.505173 TTGCTAAGGTATACGTACACTCC 57.495 43.478 3.68 1.96 32.25 3.85
1793 1916 4.785301 TGCTAAGGTATACGTACACTCCT 58.215 43.478 3.68 4.19 32.25 3.69
1794 1917 4.818546 TGCTAAGGTATACGTACACTCCTC 59.181 45.833 3.68 0.00 32.25 3.71
1795 1918 4.215185 GCTAAGGTATACGTACACTCCTCC 59.785 50.000 3.68 0.00 32.25 4.30
1796 1919 4.516652 AAGGTATACGTACACTCCTCCT 57.483 45.455 3.68 0.00 32.25 3.69
1797 1920 4.516652 AGGTATACGTACACTCCTCCTT 57.483 45.455 3.68 0.00 32.25 3.36
1798 1921 4.864726 AGGTATACGTACACTCCTCCTTT 58.135 43.478 3.68 0.00 32.25 3.11
1799 1922 5.267587 AGGTATACGTACACTCCTCCTTTT 58.732 41.667 3.68 0.00 32.25 2.27
1800 1923 5.359292 AGGTATACGTACACTCCTCCTTTTC 59.641 44.000 3.68 0.00 32.25 2.29
1801 1924 5.359292 GGTATACGTACACTCCTCCTTTTCT 59.641 44.000 3.68 0.00 32.25 2.52
1802 1925 6.543831 GGTATACGTACACTCCTCCTTTTCTA 59.456 42.308 3.68 0.00 32.25 2.10
1803 1926 7.067494 GGTATACGTACACTCCTCCTTTTCTAA 59.933 40.741 3.68 0.00 32.25 2.10
1804 1927 5.796424 ACGTACACTCCTCCTTTTCTAAA 57.204 39.130 0.00 0.00 0.00 1.85
1805 1928 6.165700 ACGTACACTCCTCCTTTTCTAAAA 57.834 37.500 0.00 0.00 0.00 1.52
1806 1929 6.585416 ACGTACACTCCTCCTTTTCTAAAAA 58.415 36.000 0.00 0.00 0.00 1.94
1910 2270 5.289595 TCACAAGTATTAGCTGCTATTCCG 58.710 41.667 10.64 0.58 0.00 4.30
2156 2527 3.736433 CGAGTCCTCCTTATCAGCAGTTG 60.736 52.174 0.00 0.00 0.00 3.16
2225 2617 0.895530 CCGTAGTGGTGTGGATCAGT 59.104 55.000 0.00 0.00 0.00 3.41
2387 2782 2.350522 ACTTCCGTAAAGCTGCTGATG 58.649 47.619 1.35 0.00 38.67 3.07
2389 2784 0.744414 TCCGTAAAGCTGCTGATGCC 60.744 55.000 1.35 0.00 38.71 4.40
2416 2811 3.314307 TCTCTAACATCAGACCCCGAT 57.686 47.619 0.00 0.00 0.00 4.18
2538 2948 3.935828 GAGTCTAAAGATCAAGGTGGTGC 59.064 47.826 0.00 0.00 0.00 5.01
2569 2979 0.034896 ACTTACCTGGTGGCGTTCTG 59.965 55.000 10.23 0.00 36.63 3.02
2857 3267 1.903183 AGTACTCCTGAAGTTCCCTGC 59.097 52.381 0.00 0.00 39.55 4.85
2909 3319 5.152934 ACTGTATAATACCAGGTACCCCAG 58.847 45.833 8.74 6.74 0.00 4.45
2913 3323 0.252974 ATACCAGGTACCCCAGTGCA 60.253 55.000 8.74 0.00 0.00 4.57
2918 3328 1.837439 CAGGTACCCCAGTGCAATCTA 59.163 52.381 8.74 0.00 0.00 1.98
3037 3447 5.016051 TCAGAGAAGGATATGCACAGTTC 57.984 43.478 0.00 0.00 0.00 3.01
3044 3454 5.108187 AGGATATGCACAGTTCACTGAAT 57.892 39.130 14.00 6.82 46.59 2.57
3082 3492 5.255710 TCAAAGTAGCTGAGCTAGATGAC 57.744 43.478 15.54 5.21 42.11 3.06
3083 3493 4.706962 TCAAAGTAGCTGAGCTAGATGACA 59.293 41.667 15.54 0.00 42.11 3.58
3515 4321 7.125053 CCTCATCCCTCTCTAACTACTCTTTTT 59.875 40.741 0.00 0.00 0.00 1.94
4010 5255 2.240414 TGCATGATTCAGATGGACCACT 59.760 45.455 0.00 0.00 0.00 4.00
4077 5322 9.563748 AAAAACAATTTGTCAGATTTGGATGAT 57.436 25.926 1.83 0.00 0.00 2.45
4305 5551 3.438216 TGAATGTTCAGATGCCCTTGA 57.562 42.857 0.00 0.00 32.50 3.02
4310 5556 0.620556 TTCAGATGCCCTTGAGGTCC 59.379 55.000 0.00 0.00 38.26 4.46
4441 5687 3.312421 AGGTGTGTTGAGTTGAATTCACG 59.688 43.478 7.89 0.00 0.00 4.35
4565 5811 2.867368 GGTACAACACATGTCACGAACA 59.133 45.455 0.00 0.00 42.70 3.18
4984 6239 6.616237 AAAAGAAACGGAGGGAGTATCTAA 57.384 37.500 0.00 0.00 33.73 2.10
5101 6356 6.485648 GGTTGACTTAGGACAAAGCTAGAAAA 59.514 38.462 0.00 0.00 0.00 2.29
5124 7073 6.808008 ATCAATCGAGAAACTGAACATTGT 57.192 33.333 0.00 0.00 0.00 2.71
5126 7075 7.905604 TCAATCGAGAAACTGAACATTGTAT 57.094 32.000 0.00 0.00 0.00 2.29
5127 7076 8.322906 TCAATCGAGAAACTGAACATTGTATT 57.677 30.769 0.00 0.00 0.00 1.89
5128 7077 8.783093 TCAATCGAGAAACTGAACATTGTATTT 58.217 29.630 0.00 0.00 0.00 1.40
5839 7791 7.202038 CCTCCATCTAGAAATGTAGGTCATTCA 60.202 40.741 0.00 0.00 44.85 2.57
5849 7801 7.581213 AATGTAGGTCATTCAACTTGTTTGA 57.419 32.000 0.00 0.00 42.35 2.69
5950 7902 9.328845 AGAATTTGCAAGAAAAATCTAAAGCAA 57.671 25.926 0.00 0.00 38.76 3.91
6079 8031 4.787260 TTCACAATAACACAGCATGCAT 57.213 36.364 21.98 4.26 42.53 3.96
6500 8452 9.362539 GTTTAAACCTCTTCGATTATGTACTCA 57.637 33.333 7.12 0.00 0.00 3.41
6642 8594 1.140652 AGAGGCAGATCAGCTTTAGGC 59.859 52.381 10.16 0.00 42.19 3.93
6780 8732 8.614346 ACTATTCGAGTGTGAGATAACTTAGAC 58.386 37.037 0.00 0.00 36.87 2.59
6820 8772 7.820386 TCTGATGAAAATGCTTGCATGTTTAAT 59.180 29.630 11.73 9.11 30.17 1.40
6821 8773 8.999220 TGATGAAAATGCTTGCATGTTTAATA 57.001 26.923 11.73 0.66 30.17 0.98
6896 8848 3.667497 AGTACCATATGATGAGCACGG 57.333 47.619 3.65 0.00 0.00 4.94
6913 8865 0.378962 CGGCGTTGAAACCAAACTCA 59.621 50.000 0.00 0.00 0.00 3.41
6916 8868 2.223711 GGCGTTGAAACCAAACTCATGT 60.224 45.455 0.00 0.00 0.00 3.21
7137 9089 3.012518 CTGGGCTCAATTCGACAGAAAT 58.987 45.455 0.00 0.00 40.15 2.17
7138 9090 2.749076 TGGGCTCAATTCGACAGAAATG 59.251 45.455 0.00 0.00 40.15 2.32
7139 9091 2.478539 GGGCTCAATTCGACAGAAATGC 60.479 50.000 0.00 0.00 40.15 3.56
7176 9128 8.975410 TGATGAAAAATAATCTTTCAGTGCTG 57.025 30.769 4.53 0.00 43.89 4.41
7452 9567 7.675161 TCAATCTGATGTTACCTTGATAGGA 57.325 36.000 0.00 0.00 45.05 2.94
7665 9792 6.365970 AGTACCAGAATGACAGAACTCAAT 57.634 37.500 0.00 0.00 39.69 2.57
8109 10252 1.300542 GATACCGAGAGCAGCTGCC 60.301 63.158 34.39 24.64 43.38 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.817099 CGCCAAGTGGAGCCATCTC 60.817 63.158 0.18 0.00 37.39 2.75
3 4 2.249413 CTCGCCAAGTGGAGCCATCT 62.249 60.000 0.18 0.00 37.39 2.90
7 8 1.172812 AAAACTCGCCAAGTGGAGCC 61.173 55.000 0.18 0.00 38.58 4.70
8 9 0.040067 CAAAACTCGCCAAGTGGAGC 60.040 55.000 0.18 0.00 38.58 4.70
9 10 1.593196 TCAAAACTCGCCAAGTGGAG 58.407 50.000 0.18 0.00 38.58 3.86
10 11 2.270352 ATCAAAACTCGCCAAGTGGA 57.730 45.000 0.18 0.00 38.58 4.02
11 12 2.607771 CCAATCAAAACTCGCCAAGTGG 60.608 50.000 0.00 0.00 38.58 4.00
12 13 2.293122 TCCAATCAAAACTCGCCAAGTG 59.707 45.455 0.00 0.00 38.58 3.16
13 14 2.293399 GTCCAATCAAAACTCGCCAAGT 59.707 45.455 0.00 0.00 41.10 3.16
14 15 2.554032 AGTCCAATCAAAACTCGCCAAG 59.446 45.455 0.00 0.00 0.00 3.61
15 16 2.582052 AGTCCAATCAAAACTCGCCAA 58.418 42.857 0.00 0.00 0.00 4.52
16 17 2.270352 AGTCCAATCAAAACTCGCCA 57.730 45.000 0.00 0.00 0.00 5.69
17 18 2.678336 CCTAGTCCAATCAAAACTCGCC 59.322 50.000 0.00 0.00 0.00 5.54
18 19 3.371285 GTCCTAGTCCAATCAAAACTCGC 59.629 47.826 0.00 0.00 0.00 5.03
19 20 3.933332 GGTCCTAGTCCAATCAAAACTCG 59.067 47.826 0.00 0.00 0.00 4.18
20 21 4.906618 TGGTCCTAGTCCAATCAAAACTC 58.093 43.478 2.00 0.00 31.50 3.01
21 22 4.993705 TGGTCCTAGTCCAATCAAAACT 57.006 40.909 2.00 0.00 31.50 2.66
22 23 5.535030 AGTTTGGTCCTAGTCCAATCAAAAC 59.465 40.000 18.64 13.15 43.25 2.43
23 24 5.701224 AGTTTGGTCCTAGTCCAATCAAAA 58.299 37.500 18.64 5.21 43.25 2.44
24 25 5.319043 AGTTTGGTCCTAGTCCAATCAAA 57.681 39.130 18.64 6.79 43.25 2.69
25 26 4.993705 AGTTTGGTCCTAGTCCAATCAA 57.006 40.909 18.64 5.71 43.25 2.57
26 27 4.651778 CAAGTTTGGTCCTAGTCCAATCA 58.348 43.478 18.64 6.21 43.25 2.57
27 28 3.440522 GCAAGTTTGGTCCTAGTCCAATC 59.559 47.826 14.57 13.70 43.25 2.67
28 29 3.181434 TGCAAGTTTGGTCCTAGTCCAAT 60.181 43.478 14.57 2.24 43.25 3.16
29 30 2.173782 TGCAAGTTTGGTCCTAGTCCAA 59.826 45.455 11.14 11.14 42.29 3.53
30 31 1.771854 TGCAAGTTTGGTCCTAGTCCA 59.228 47.619 0.50 0.50 0.00 4.02
31 32 2.152016 GTGCAAGTTTGGTCCTAGTCC 58.848 52.381 0.00 0.00 0.00 3.85
32 33 2.152016 GGTGCAAGTTTGGTCCTAGTC 58.848 52.381 0.00 0.00 0.00 2.59
33 34 1.774856 AGGTGCAAGTTTGGTCCTAGT 59.225 47.619 0.00 0.00 0.00 2.57
34 35 2.427506 GAGGTGCAAGTTTGGTCCTAG 58.572 52.381 0.00 0.00 0.00 3.02
35 36 1.073284 GGAGGTGCAAGTTTGGTCCTA 59.927 52.381 0.00 0.00 0.00 2.94
36 37 0.178990 GGAGGTGCAAGTTTGGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
37 38 0.467290 TGGAGGTGCAAGTTTGGTCC 60.467 55.000 0.00 0.00 0.00 4.46
38 39 1.270550 CATGGAGGTGCAAGTTTGGTC 59.729 52.381 0.00 0.00 0.00 4.02
39 40 1.133513 TCATGGAGGTGCAAGTTTGGT 60.134 47.619 0.00 0.00 0.00 3.67
40 41 1.270550 GTCATGGAGGTGCAAGTTTGG 59.729 52.381 0.00 0.00 0.00 3.28
41 42 1.955778 TGTCATGGAGGTGCAAGTTTG 59.044 47.619 0.00 0.00 0.00 2.93
42 43 2.363306 TGTCATGGAGGTGCAAGTTT 57.637 45.000 0.00 0.00 0.00 2.66
43 44 2.233271 CTTGTCATGGAGGTGCAAGTT 58.767 47.619 0.00 0.00 33.03 2.66
44 45 1.143684 ACTTGTCATGGAGGTGCAAGT 59.856 47.619 0.00 0.00 39.41 3.16
45 46 1.901591 ACTTGTCATGGAGGTGCAAG 58.098 50.000 0.00 0.00 38.27 4.01
46 47 1.955778 CAACTTGTCATGGAGGTGCAA 59.044 47.619 0.00 0.00 0.00 4.08
47 48 1.142667 TCAACTTGTCATGGAGGTGCA 59.857 47.619 0.00 0.00 30.67 4.57
48 49 1.896220 TCAACTTGTCATGGAGGTGC 58.104 50.000 0.00 0.00 30.67 5.01
49 50 2.816087 CCTTCAACTTGTCATGGAGGTG 59.184 50.000 0.00 0.00 37.52 4.00
50 51 2.711009 TCCTTCAACTTGTCATGGAGGT 59.289 45.455 0.27 0.00 42.17 3.85
51 52 3.423539 TCCTTCAACTTGTCATGGAGG 57.576 47.619 0.00 0.00 42.79 4.30
52 53 4.582869 TCATCCTTCAACTTGTCATGGAG 58.417 43.478 0.00 0.00 0.00 3.86
53 54 4.639078 TCATCCTTCAACTTGTCATGGA 57.361 40.909 0.00 0.00 0.00 3.41
54 55 5.710513 TTTCATCCTTCAACTTGTCATGG 57.289 39.130 0.00 0.00 0.00 3.66
55 56 9.512435 GATTATTTCATCCTTCAACTTGTCATG 57.488 33.333 0.00 0.00 0.00 3.07
56 57 9.246670 TGATTATTTCATCCTTCAACTTGTCAT 57.753 29.630 0.00 0.00 0.00 3.06
57 58 8.634335 TGATTATTTCATCCTTCAACTTGTCA 57.366 30.769 0.00 0.00 0.00 3.58
58 59 7.699812 GCTGATTATTTCATCCTTCAACTTGTC 59.300 37.037 0.00 0.00 32.72 3.18
59 60 7.395489 AGCTGATTATTTCATCCTTCAACTTGT 59.605 33.333 0.00 0.00 32.72 3.16
60 61 7.769220 AGCTGATTATTTCATCCTTCAACTTG 58.231 34.615 0.00 0.00 32.72 3.16
61 62 7.951347 AGCTGATTATTTCATCCTTCAACTT 57.049 32.000 0.00 0.00 32.72 2.66
62 63 7.951347 AAGCTGATTATTTCATCCTTCAACT 57.049 32.000 0.00 0.00 32.72 3.16
63 64 8.992835 AAAAGCTGATTATTTCATCCTTCAAC 57.007 30.769 0.00 0.00 32.72 3.18
64 65 9.643693 GAAAAAGCTGATTATTTCATCCTTCAA 57.356 29.630 0.00 0.00 32.72 2.69
65 66 8.805175 TGAAAAAGCTGATTATTTCATCCTTCA 58.195 29.630 9.99 0.00 36.99 3.02
66 67 9.643693 TTGAAAAAGCTGATTATTTCATCCTTC 57.356 29.630 12.92 0.00 40.36 3.46
67 68 9.649167 CTTGAAAAAGCTGATTATTTCATCCTT 57.351 29.630 12.92 0.00 40.36 3.36
68 69 8.810041 ACTTGAAAAAGCTGATTATTTCATCCT 58.190 29.630 12.92 2.36 40.36 3.24
69 70 8.992835 ACTTGAAAAAGCTGATTATTTCATCC 57.007 30.769 12.92 0.00 40.36 3.51
76 77 9.914131 GTCCTTAAACTTGAAAAAGCTGATTAT 57.086 29.630 0.00 0.00 0.00 1.28
77 78 8.357402 GGTCCTTAAACTTGAAAAAGCTGATTA 58.643 33.333 0.00 0.00 0.00 1.75
78 79 7.147742 TGGTCCTTAAACTTGAAAAAGCTGATT 60.148 33.333 0.00 0.00 0.00 2.57
79 80 6.323739 TGGTCCTTAAACTTGAAAAAGCTGAT 59.676 34.615 0.00 0.00 0.00 2.90
80 81 5.654650 TGGTCCTTAAACTTGAAAAAGCTGA 59.345 36.000 0.00 0.00 0.00 4.26
81 82 5.901552 TGGTCCTTAAACTTGAAAAAGCTG 58.098 37.500 0.00 0.00 0.00 4.24
82 83 6.538945 TTGGTCCTTAAACTTGAAAAAGCT 57.461 33.333 0.00 0.00 0.00 3.74
83 84 6.036735 GGTTTGGTCCTTAAACTTGAAAAAGC 59.963 38.462 5.15 0.00 37.96 3.51
84 85 7.100409 TGGTTTGGTCCTTAAACTTGAAAAAG 58.900 34.615 5.15 0.00 37.96 2.27
85 86 7.005709 TGGTTTGGTCCTTAAACTTGAAAAA 57.994 32.000 5.15 0.00 37.96 1.94
86 87 6.607004 TGGTTTGGTCCTTAAACTTGAAAA 57.393 33.333 5.15 0.00 37.96 2.29
87 88 6.381420 TGATGGTTTGGTCCTTAAACTTGAAA 59.619 34.615 5.15 0.00 37.96 2.69
88 89 5.894393 TGATGGTTTGGTCCTTAAACTTGAA 59.106 36.000 5.15 0.00 37.96 2.69
89 90 5.300792 GTGATGGTTTGGTCCTTAAACTTGA 59.699 40.000 5.15 0.00 37.96 3.02
90 91 5.508994 GGTGATGGTTTGGTCCTTAAACTTG 60.509 44.000 5.15 0.00 37.96 3.16
91 92 4.587262 GGTGATGGTTTGGTCCTTAAACTT 59.413 41.667 5.15 0.00 37.96 2.66
92 93 4.141018 AGGTGATGGTTTGGTCCTTAAACT 60.141 41.667 5.15 0.00 37.96 2.66
93 94 4.149598 AGGTGATGGTTTGGTCCTTAAAC 58.850 43.478 0.00 0.00 37.31 2.01
94 95 4.403734 GAGGTGATGGTTTGGTCCTTAAA 58.596 43.478 0.00 0.00 0.00 1.52
95 96 3.245122 GGAGGTGATGGTTTGGTCCTTAA 60.245 47.826 0.00 0.00 0.00 1.85
96 97 2.307686 GGAGGTGATGGTTTGGTCCTTA 59.692 50.000 0.00 0.00 0.00 2.69
97 98 1.075536 GGAGGTGATGGTTTGGTCCTT 59.924 52.381 0.00 0.00 0.00 3.36
98 99 0.698818 GGAGGTGATGGTTTGGTCCT 59.301 55.000 0.00 0.00 0.00 3.85
99 100 0.404040 TGGAGGTGATGGTTTGGTCC 59.596 55.000 0.00 0.00 0.00 4.46
100 101 2.094675 CATGGAGGTGATGGTTTGGTC 58.905 52.381 0.00 0.00 0.00 4.02
101 102 1.710244 TCATGGAGGTGATGGTTTGGT 59.290 47.619 0.00 0.00 0.00 3.67
102 103 2.094675 GTCATGGAGGTGATGGTTTGG 58.905 52.381 0.00 0.00 0.00 3.28
103 104 2.794103 TGTCATGGAGGTGATGGTTTG 58.206 47.619 0.00 0.00 0.00 2.93
104 105 3.181429 ACTTGTCATGGAGGTGATGGTTT 60.181 43.478 0.00 0.00 0.00 3.27
105 106 2.376518 ACTTGTCATGGAGGTGATGGTT 59.623 45.455 0.00 0.00 0.00 3.67
106 107 1.988107 ACTTGTCATGGAGGTGATGGT 59.012 47.619 0.00 0.00 0.00 3.55
107 108 2.795231 ACTTGTCATGGAGGTGATGG 57.205 50.000 0.00 0.00 0.00 3.51
108 109 3.678289 TGAACTTGTCATGGAGGTGATG 58.322 45.455 0.00 0.00 0.00 3.07
109 110 3.307975 CCTGAACTTGTCATGGAGGTGAT 60.308 47.826 0.00 0.00 35.07 3.06
110 111 2.038952 CCTGAACTTGTCATGGAGGTGA 59.961 50.000 0.00 0.00 35.07 4.02
111 112 2.430465 CCTGAACTTGTCATGGAGGTG 58.570 52.381 0.00 0.00 35.07 4.00
112 113 1.352352 CCCTGAACTTGTCATGGAGGT 59.648 52.381 0.00 0.00 43.01 3.85
113 114 1.630369 TCCCTGAACTTGTCATGGAGG 59.370 52.381 0.00 0.00 43.79 4.30
115 116 1.351017 GGTCCCTGAACTTGTCATGGA 59.649 52.381 0.00 0.00 45.74 3.41
116 117 1.352352 AGGTCCCTGAACTTGTCATGG 59.648 52.381 0.00 0.00 42.02 3.66
117 118 2.224621 ACAGGTCCCTGAACTTGTCATG 60.225 50.000 19.95 0.00 46.30 3.07
118 119 2.057922 ACAGGTCCCTGAACTTGTCAT 58.942 47.619 19.95 0.00 46.30 3.06
119 120 1.140852 CACAGGTCCCTGAACTTGTCA 59.859 52.381 19.95 0.00 46.30 3.58
120 121 1.543429 CCACAGGTCCCTGAACTTGTC 60.543 57.143 19.95 0.00 46.30 3.18
121 122 0.474184 CCACAGGTCCCTGAACTTGT 59.526 55.000 19.95 0.00 46.30 3.16
122 123 0.474184 ACCACAGGTCCCTGAACTTG 59.526 55.000 19.95 7.42 46.30 3.16
123 124 0.474184 CACCACAGGTCCCTGAACTT 59.526 55.000 19.95 0.00 46.30 2.66
124 125 2.056906 GCACCACAGGTCCCTGAACT 62.057 60.000 19.95 0.00 46.30 3.01
125 126 1.600916 GCACCACAGGTCCCTGAAC 60.601 63.158 19.95 0.00 46.30 3.18
126 127 0.472925 TAGCACCACAGGTCCCTGAA 60.473 55.000 19.95 0.00 46.30 3.02
127 128 0.252696 ATAGCACCACAGGTCCCTGA 60.253 55.000 19.95 0.00 46.30 3.86
129 130 1.838077 GTAATAGCACCACAGGTCCCT 59.162 52.381 0.00 0.00 31.02 4.20
130 131 1.134189 GGTAATAGCACCACAGGTCCC 60.134 57.143 0.00 0.00 38.55 4.46
131 132 1.838077 AGGTAATAGCACCACAGGTCC 59.162 52.381 0.00 0.00 41.40 4.46
132 133 2.766828 AGAGGTAATAGCACCACAGGTC 59.233 50.000 0.00 0.00 41.40 3.85
133 134 2.834113 AGAGGTAATAGCACCACAGGT 58.166 47.619 0.00 0.00 41.40 4.00
134 135 3.197766 TGAAGAGGTAATAGCACCACAGG 59.802 47.826 0.00 0.00 41.40 4.00
135 136 4.471904 TGAAGAGGTAATAGCACCACAG 57.528 45.455 0.00 0.00 41.40 3.66
136 137 6.747414 ATATGAAGAGGTAATAGCACCACA 57.253 37.500 0.00 0.00 41.40 4.17
137 138 8.345565 CAAAATATGAAGAGGTAATAGCACCAC 58.654 37.037 0.00 0.00 41.40 4.16
138 139 7.502226 CCAAAATATGAAGAGGTAATAGCACCA 59.498 37.037 0.00 0.00 41.40 4.17
139 140 7.502561 ACCAAAATATGAAGAGGTAATAGCACC 59.497 37.037 0.00 0.00 39.02 5.01
140 141 8.451908 ACCAAAATATGAAGAGGTAATAGCAC 57.548 34.615 0.00 0.00 0.00 4.40
141 142 8.494433 AGACCAAAATATGAAGAGGTAATAGCA 58.506 33.333 0.00 0.00 0.00 3.49
142 143 8.910351 AGACCAAAATATGAAGAGGTAATAGC 57.090 34.615 0.00 0.00 0.00 2.97
148 149 9.588096 ACTAAAAAGACCAAAATATGAAGAGGT 57.412 29.630 0.00 0.00 0.00 3.85
158 159 9.946165 CGACTAAAGAACTAAAAAGACCAAAAT 57.054 29.630 0.00 0.00 0.00 1.82
159 160 8.400186 CCGACTAAAGAACTAAAAAGACCAAAA 58.600 33.333 0.00 0.00 0.00 2.44
160 161 7.467675 GCCGACTAAAGAACTAAAAAGACCAAA 60.468 37.037 0.00 0.00 0.00 3.28
161 162 6.017687 GCCGACTAAAGAACTAAAAAGACCAA 60.018 38.462 0.00 0.00 0.00 3.67
162 163 5.467735 GCCGACTAAAGAACTAAAAAGACCA 59.532 40.000 0.00 0.00 0.00 4.02
163 164 5.467735 TGCCGACTAAAGAACTAAAAAGACC 59.532 40.000 0.00 0.00 0.00 3.85
164 165 6.535274 TGCCGACTAAAGAACTAAAAAGAC 57.465 37.500 0.00 0.00 0.00 3.01
165 166 7.556733 TTTGCCGACTAAAGAACTAAAAAGA 57.443 32.000 0.00 0.00 0.00 2.52
166 167 6.359883 GCTTTGCCGACTAAAGAACTAAAAAG 59.640 38.462 9.27 0.00 37.33 2.27
167 168 6.183360 TGCTTTGCCGACTAAAGAACTAAAAA 60.183 34.615 9.27 0.00 37.33 1.94
168 169 5.297278 TGCTTTGCCGACTAAAGAACTAAAA 59.703 36.000 9.27 0.00 37.33 1.52
169 170 4.817464 TGCTTTGCCGACTAAAGAACTAAA 59.183 37.500 9.27 0.00 37.33 1.85
170 171 4.382291 TGCTTTGCCGACTAAAGAACTAA 58.618 39.130 9.27 0.00 37.33 2.24
171 172 3.997762 TGCTTTGCCGACTAAAGAACTA 58.002 40.909 9.27 0.00 37.33 2.24
172 173 2.846193 TGCTTTGCCGACTAAAGAACT 58.154 42.857 9.27 0.00 37.33 3.01
173 174 3.058224 ACATGCTTTGCCGACTAAAGAAC 60.058 43.478 9.27 0.00 37.33 3.01
174 175 3.146066 ACATGCTTTGCCGACTAAAGAA 58.854 40.909 9.27 1.06 37.33 2.52
175 176 2.778299 ACATGCTTTGCCGACTAAAGA 58.222 42.857 9.27 0.00 37.33 2.52
176 177 3.058293 TGAACATGCTTTGCCGACTAAAG 60.058 43.478 0.00 0.00 38.00 1.85
177 178 2.881513 TGAACATGCTTTGCCGACTAAA 59.118 40.909 0.00 0.00 0.00 1.85
178 179 2.499197 TGAACATGCTTTGCCGACTAA 58.501 42.857 0.00 0.00 0.00 2.24
179 180 2.177394 TGAACATGCTTTGCCGACTA 57.823 45.000 0.00 0.00 0.00 2.59
180 181 1.001378 GTTGAACATGCTTTGCCGACT 60.001 47.619 0.00 0.00 0.00 4.18
181 182 1.001378 AGTTGAACATGCTTTGCCGAC 60.001 47.619 0.00 0.00 0.00 4.79
182 183 1.317613 AGTTGAACATGCTTTGCCGA 58.682 45.000 0.00 0.00 0.00 5.54
183 184 2.138596 AAGTTGAACATGCTTTGCCG 57.861 45.000 0.00 0.00 0.00 5.69
184 185 3.865224 CAAAGTTGAACATGCTTTGCC 57.135 42.857 9.02 0.00 41.35 4.52
187 188 3.490761 CCCGACAAAGTTGAACATGCTTT 60.491 43.478 0.00 0.00 33.28 3.51
188 189 2.034558 CCCGACAAAGTTGAACATGCTT 59.965 45.455 0.00 0.00 0.00 3.91
189 190 1.608590 CCCGACAAAGTTGAACATGCT 59.391 47.619 0.00 0.00 0.00 3.79
190 191 1.606668 TCCCGACAAAGTTGAACATGC 59.393 47.619 0.00 0.00 0.00 4.06
191 192 3.853307 GCTTCCCGACAAAGTTGAACATG 60.853 47.826 0.00 0.00 0.00 3.21
192 193 2.293399 GCTTCCCGACAAAGTTGAACAT 59.707 45.455 0.00 0.00 0.00 2.71
193 194 1.673920 GCTTCCCGACAAAGTTGAACA 59.326 47.619 0.00 0.00 0.00 3.18
194 195 1.947456 AGCTTCCCGACAAAGTTGAAC 59.053 47.619 0.00 0.00 0.00 3.18
195 196 2.341846 AGCTTCCCGACAAAGTTGAA 57.658 45.000 0.00 0.00 0.00 2.69
196 197 2.367567 ACTAGCTTCCCGACAAAGTTGA 59.632 45.455 0.00 0.00 0.00 3.18
197 198 2.480419 CACTAGCTTCCCGACAAAGTTG 59.520 50.000 0.00 0.00 0.00 3.16
198 199 2.367567 TCACTAGCTTCCCGACAAAGTT 59.632 45.455 0.00 0.00 0.00 2.66
199 200 1.968493 TCACTAGCTTCCCGACAAAGT 59.032 47.619 0.00 0.00 0.00 2.66
200 201 2.611518 CTCACTAGCTTCCCGACAAAG 58.388 52.381 0.00 0.00 0.00 2.77
201 202 1.275291 CCTCACTAGCTTCCCGACAAA 59.725 52.381 0.00 0.00 0.00 2.83
202 203 0.895530 CCTCACTAGCTTCCCGACAA 59.104 55.000 0.00 0.00 0.00 3.18
203 204 0.251653 ACCTCACTAGCTTCCCGACA 60.252 55.000 0.00 0.00 0.00 4.35
204 205 1.760192 TACCTCACTAGCTTCCCGAC 58.240 55.000 0.00 0.00 0.00 4.79
205 206 2.376109 CTTACCTCACTAGCTTCCCGA 58.624 52.381 0.00 0.00 0.00 5.14
206 207 1.409427 CCTTACCTCACTAGCTTCCCG 59.591 57.143 0.00 0.00 0.00 5.14
207 208 2.431419 GACCTTACCTCACTAGCTTCCC 59.569 54.545 0.00 0.00 0.00 3.97
208 209 3.367321 AGACCTTACCTCACTAGCTTCC 58.633 50.000 0.00 0.00 0.00 3.46
209 210 3.382227 GGAGACCTTACCTCACTAGCTTC 59.618 52.174 0.00 0.00 32.48 3.86
210 211 3.011934 AGGAGACCTTACCTCACTAGCTT 59.988 47.826 0.00 0.00 32.48 3.74
211 212 2.583566 AGGAGACCTTACCTCACTAGCT 59.416 50.000 0.00 0.00 32.48 3.32
212 213 3.021177 AGGAGACCTTACCTCACTAGC 57.979 52.381 0.00 0.00 32.48 3.42
213 214 3.702045 CCAAGGAGACCTTACCTCACTAG 59.298 52.174 2.62 0.00 42.67 2.57
214 215 3.077088 ACCAAGGAGACCTTACCTCACTA 59.923 47.826 2.62 0.00 42.67 2.74
215 216 2.158143 ACCAAGGAGACCTTACCTCACT 60.158 50.000 2.62 0.00 42.67 3.41
216 217 2.234168 GACCAAGGAGACCTTACCTCAC 59.766 54.545 2.62 0.00 42.67 3.51
217 218 2.537143 GACCAAGGAGACCTTACCTCA 58.463 52.381 2.62 0.00 42.67 3.86
218 219 1.832366 GGACCAAGGAGACCTTACCTC 59.168 57.143 2.62 0.00 42.67 3.85
219 220 1.437547 AGGACCAAGGAGACCTTACCT 59.562 52.381 2.62 9.20 42.67 3.08
220 221 1.555533 CAGGACCAAGGAGACCTTACC 59.444 57.143 2.62 7.38 42.67 2.85
221 222 2.258109 ACAGGACCAAGGAGACCTTAC 58.742 52.381 2.62 0.00 42.67 2.34
222 223 2.715763 ACAGGACCAAGGAGACCTTA 57.284 50.000 2.62 0.00 42.67 2.69
223 224 1.821088 AACAGGACCAAGGAGACCTT 58.179 50.000 0.00 0.00 45.88 3.50
224 225 1.421646 CAAACAGGACCAAGGAGACCT 59.578 52.381 0.00 0.00 33.87 3.85
225 226 1.545651 CCAAACAGGACCAAGGAGACC 60.546 57.143 0.00 0.00 41.22 3.85
226 227 1.897560 CCAAACAGGACCAAGGAGAC 58.102 55.000 0.00 0.00 41.22 3.36
227 228 0.110486 GCCAAACAGGACCAAGGAGA 59.890 55.000 0.00 0.00 41.22 3.71
228 229 0.111253 AGCCAAACAGGACCAAGGAG 59.889 55.000 0.00 0.00 41.22 3.69
229 230 0.178992 CAGCCAAACAGGACCAAGGA 60.179 55.000 0.00 0.00 41.22 3.36
230 231 1.181098 CCAGCCAAACAGGACCAAGG 61.181 60.000 0.00 0.00 41.22 3.61
231 232 0.178992 TCCAGCCAAACAGGACCAAG 60.179 55.000 0.00 0.00 41.22 3.61
232 233 0.482446 ATCCAGCCAAACAGGACCAA 59.518 50.000 0.00 0.00 36.66 3.67
233 234 1.367346 TATCCAGCCAAACAGGACCA 58.633 50.000 0.00 0.00 36.66 4.02
234 235 2.301346 CATATCCAGCCAAACAGGACC 58.699 52.381 0.00 0.00 36.66 4.46
235 236 2.301346 CCATATCCAGCCAAACAGGAC 58.699 52.381 0.00 0.00 36.66 3.85
236 237 1.215173 CCCATATCCAGCCAAACAGGA 59.785 52.381 0.00 0.00 41.22 3.86
237 238 1.215173 TCCCATATCCAGCCAAACAGG 59.785 52.381 0.00 0.00 41.84 4.00
238 239 2.734755 TCCCATATCCAGCCAAACAG 57.265 50.000 0.00 0.00 0.00 3.16
239 240 2.424667 CCATCCCATATCCAGCCAAACA 60.425 50.000 0.00 0.00 0.00 2.83
240 241 2.242043 CCATCCCATATCCAGCCAAAC 58.758 52.381 0.00 0.00 0.00 2.93
241 242 1.858910 ACCATCCCATATCCAGCCAAA 59.141 47.619 0.00 0.00 0.00 3.28
242 243 1.533187 ACCATCCCATATCCAGCCAA 58.467 50.000 0.00 0.00 0.00 4.52
243 244 1.425066 GAACCATCCCATATCCAGCCA 59.575 52.381 0.00 0.00 0.00 4.75
244 245 1.707427 AGAACCATCCCATATCCAGCC 59.293 52.381 0.00 0.00 0.00 4.85
245 246 2.641815 AGAGAACCATCCCATATCCAGC 59.358 50.000 0.00 0.00 0.00 4.85
246 247 4.081198 GCTAGAGAACCATCCCATATCCAG 60.081 50.000 0.00 0.00 0.00 3.86
247 248 3.840666 GCTAGAGAACCATCCCATATCCA 59.159 47.826 0.00 0.00 0.00 3.41
248 249 3.198853 GGCTAGAGAACCATCCCATATCC 59.801 52.174 0.00 0.00 0.00 2.59
249 250 3.198853 GGGCTAGAGAACCATCCCATATC 59.801 52.174 0.00 0.00 34.01 1.63
250 251 3.185455 GGGCTAGAGAACCATCCCATAT 58.815 50.000 0.00 0.00 34.01 1.78
251 252 2.621070 GGGCTAGAGAACCATCCCATA 58.379 52.381 0.00 0.00 34.01 2.74
252 253 1.439543 GGGCTAGAGAACCATCCCAT 58.560 55.000 0.00 0.00 34.01 4.00
253 254 0.694444 GGGGCTAGAGAACCATCCCA 60.694 60.000 0.00 0.00 35.49 4.37
254 255 0.400670 AGGGGCTAGAGAACCATCCC 60.401 60.000 0.00 0.00 0.00 3.85
255 256 1.418264 GAAGGGGCTAGAGAACCATCC 59.582 57.143 0.00 0.00 0.00 3.51
256 257 2.119495 TGAAGGGGCTAGAGAACCATC 58.881 52.381 0.00 0.00 0.00 3.51
257 258 1.840635 GTGAAGGGGCTAGAGAACCAT 59.159 52.381 0.00 0.00 0.00 3.55
258 259 1.276622 GTGAAGGGGCTAGAGAACCA 58.723 55.000 0.00 0.00 0.00 3.67
259 260 0.542333 GGTGAAGGGGCTAGAGAACC 59.458 60.000 0.00 0.00 0.00 3.62
260 261 0.175989 CGGTGAAGGGGCTAGAGAAC 59.824 60.000 0.00 0.00 0.00 3.01
261 262 1.614241 GCGGTGAAGGGGCTAGAGAA 61.614 60.000 0.00 0.00 0.00 2.87
262 263 2.058595 GCGGTGAAGGGGCTAGAGA 61.059 63.158 0.00 0.00 0.00 3.10
263 264 2.501610 GCGGTGAAGGGGCTAGAG 59.498 66.667 0.00 0.00 0.00 2.43
264 265 3.081409 GGCGGTGAAGGGGCTAGA 61.081 66.667 0.00 0.00 0.00 2.43
265 266 1.335132 TAAGGCGGTGAAGGGGCTAG 61.335 60.000 0.00 0.00 38.20 3.42
266 267 0.910566 TTAAGGCGGTGAAGGGGCTA 60.911 55.000 0.00 0.00 38.20 3.93
267 268 1.785353 TTTAAGGCGGTGAAGGGGCT 61.785 55.000 0.00 0.00 41.27 5.19
268 269 1.303806 TTTAAGGCGGTGAAGGGGC 60.304 57.895 0.00 0.00 0.00 5.80
269 270 0.963856 GGTTTAAGGCGGTGAAGGGG 60.964 60.000 0.00 0.00 0.00 4.79
270 271 0.963856 GGGTTTAAGGCGGTGAAGGG 60.964 60.000 0.00 0.00 0.00 3.95
271 272 1.303091 CGGGTTTAAGGCGGTGAAGG 61.303 60.000 0.00 0.00 0.00 3.46
272 273 1.303091 CCGGGTTTAAGGCGGTGAAG 61.303 60.000 0.00 0.00 0.00 3.02
273 274 1.302671 CCGGGTTTAAGGCGGTGAA 60.303 57.895 0.00 0.00 0.00 3.18
274 275 2.175035 CTCCGGGTTTAAGGCGGTGA 62.175 60.000 0.00 0.00 0.00 4.02
275 276 1.743995 CTCCGGGTTTAAGGCGGTG 60.744 63.158 0.00 0.00 0.00 4.94
276 277 1.914764 TCTCCGGGTTTAAGGCGGT 60.915 57.895 0.00 0.00 0.00 5.68
277 278 1.449070 GTCTCCGGGTTTAAGGCGG 60.449 63.158 0.00 0.00 0.00 6.13
278 279 0.107848 ATGTCTCCGGGTTTAAGGCG 60.108 55.000 0.00 0.00 0.00 5.52
279 280 1.065709 TCATGTCTCCGGGTTTAAGGC 60.066 52.381 0.00 0.00 0.00 4.35
280 281 3.560636 ATCATGTCTCCGGGTTTAAGG 57.439 47.619 0.00 0.00 0.00 2.69
281 282 4.941263 TCAAATCATGTCTCCGGGTTTAAG 59.059 41.667 0.00 0.00 0.00 1.85
282 283 4.912586 TCAAATCATGTCTCCGGGTTTAA 58.087 39.130 0.00 0.00 0.00 1.52
283 284 4.561500 TCAAATCATGTCTCCGGGTTTA 57.438 40.909 0.00 0.00 0.00 2.01
284 285 3.433306 TCAAATCATGTCTCCGGGTTT 57.567 42.857 0.00 0.00 0.00 3.27
285 286 3.545703 GATCAAATCATGTCTCCGGGTT 58.454 45.455 0.00 0.00 0.00 4.11
286 287 2.158755 GGATCAAATCATGTCTCCGGGT 60.159 50.000 0.00 0.00 0.00 5.28
287 288 2.105477 AGGATCAAATCATGTCTCCGGG 59.895 50.000 0.00 0.00 37.17 5.73
288 289 3.397482 GAGGATCAAATCATGTCTCCGG 58.603 50.000 0.00 0.00 37.17 5.14
289 290 3.055591 CGAGGATCAAATCATGTCTCCG 58.944 50.000 0.00 0.00 37.17 4.63
290 291 4.327982 TCGAGGATCAAATCATGTCTCC 57.672 45.455 0.00 0.00 34.28 3.71
291 292 5.118357 CGAATCGAGGATCAAATCATGTCTC 59.882 44.000 0.00 0.00 33.17 3.36
292 293 4.987285 CGAATCGAGGATCAAATCATGTCT 59.013 41.667 0.00 0.00 33.17 3.41
293 294 4.747108 ACGAATCGAGGATCAAATCATGTC 59.253 41.667 10.55 0.00 33.17 3.06
294 295 4.697514 ACGAATCGAGGATCAAATCATGT 58.302 39.130 10.55 0.00 33.17 3.21
295 296 5.007039 ACAACGAATCGAGGATCAAATCATG 59.993 40.000 10.55 0.00 33.17 3.07
296 297 5.118990 ACAACGAATCGAGGATCAAATCAT 58.881 37.500 10.55 0.00 33.17 2.45
297 298 4.503910 ACAACGAATCGAGGATCAAATCA 58.496 39.130 10.55 0.00 33.17 2.57
298 299 4.566759 TGACAACGAATCGAGGATCAAATC 59.433 41.667 10.55 0.00 33.17 2.17
299 300 4.330074 GTGACAACGAATCGAGGATCAAAT 59.670 41.667 10.55 0.00 33.17 2.32
300 301 3.678072 GTGACAACGAATCGAGGATCAAA 59.322 43.478 10.55 0.00 33.17 2.69
301 302 3.250744 GTGACAACGAATCGAGGATCAA 58.749 45.455 10.55 0.00 33.17 2.57
302 303 2.416836 GGTGACAACGAATCGAGGATCA 60.417 50.000 10.55 4.67 33.17 2.92
303 304 2.194271 GGTGACAACGAATCGAGGATC 58.806 52.381 10.55 1.93 0.00 3.36
304 305 1.548719 TGGTGACAACGAATCGAGGAT 59.451 47.619 10.55 0.00 37.44 3.24
305 306 0.963225 TGGTGACAACGAATCGAGGA 59.037 50.000 10.55 0.00 37.44 3.71
306 307 3.507597 TGGTGACAACGAATCGAGG 57.492 52.632 10.55 3.01 37.44 4.63
322 323 2.292828 AGTTGATGGTGGGAGTTTGG 57.707 50.000 0.00 0.00 0.00 3.28
325 326 3.424703 CATGAAGTTGATGGTGGGAGTT 58.575 45.455 0.00 0.00 0.00 3.01
334 335 2.725759 CGCAACGACCATGAAGTTGATG 60.726 50.000 22.79 11.54 45.66 3.07
340 341 0.865111 TTGACGCAACGACCATGAAG 59.135 50.000 0.00 0.00 0.00 3.02
377 386 7.810759 CACCTCTAGAACTTTAGAACACTCTTC 59.189 40.741 0.00 0.00 32.70 2.87
378 387 7.256012 CCACCTCTAGAACTTTAGAACACTCTT 60.256 40.741 0.00 0.00 32.70 2.85
387 396 8.532819 AGTTCAATACCACCTCTAGAACTTTAG 58.467 37.037 0.00 0.00 40.71 1.85
423 432 1.488957 CTGCACTTCTTGACGACGC 59.511 57.895 0.00 0.00 0.00 5.19
434 443 3.281727 TGTTGTCTTTCTCCTGCACTT 57.718 42.857 0.00 0.00 0.00 3.16
454 472 5.871396 AACATGTCCTTAGGTATGTCGAT 57.129 39.130 18.51 6.41 33.31 3.59
482 500 5.028131 AGGAACGGAGGGAGTAGAAAATAA 58.972 41.667 0.00 0.00 0.00 1.40
503 521 5.856455 CAGCCAAAAACGTCTTACATTTAGG 59.144 40.000 0.00 0.00 0.00 2.69
524 554 6.919662 TGCACGTACTACCTATATTAAACAGC 59.080 38.462 0.00 0.00 0.00 4.40
526 556 9.820725 AAATGCACGTACTACCTATATTAAACA 57.179 29.630 0.00 0.00 0.00 2.83
534 564 9.042008 CATTCTTAAAATGCACGTACTACCTAT 57.958 33.333 0.00 0.00 0.00 2.57
635 665 9.632638 TGCCTAATTCAGATAAAGCTATTTCTT 57.367 29.630 0.00 0.00 0.00 2.52
636 666 9.061435 GTGCCTAATTCAGATAAAGCTATTTCT 57.939 33.333 0.00 0.00 0.00 2.52
637 667 9.061435 AGTGCCTAATTCAGATAAAGCTATTTC 57.939 33.333 0.00 0.00 0.00 2.17
638 668 8.986929 AGTGCCTAATTCAGATAAAGCTATTT 57.013 30.769 0.00 0.00 0.00 1.40
651 681 8.052748 ACAACCTGATAATAAGTGCCTAATTCA 58.947 33.333 0.00 0.00 0.00 2.57
676 706 2.845363 TTCAGGAACGGGTTAAGGAC 57.155 50.000 0.00 0.00 0.00 3.85
734 765 0.748005 AAACACGTTGCAGGTGCTCT 60.748 50.000 17.02 2.97 42.66 4.09
798 829 3.785859 TGCGGGATGAGGTGGAGC 61.786 66.667 0.00 0.00 0.00 4.70
1419 1455 2.767059 GCGAAATGCGACGAACGA 59.233 55.556 0.00 0.00 45.77 3.85
1438 1474 0.037419 GCAATCAAACATGGCGGGTT 60.037 50.000 0.00 0.00 0.00 4.11
1439 1475 0.899717 AGCAATCAAACATGGCGGGT 60.900 50.000 0.00 0.00 0.00 5.28
1473 1509 9.709495 AATCTCATCTTCAGTAAAGCATCTATC 57.291 33.333 0.00 0.00 34.76 2.08
1528 1583 6.817765 TCCATTTCTGTGACAAGTAATTCC 57.182 37.500 0.00 0.00 0.00 3.01
1529 1584 7.820648 ACATCCATTTCTGTGACAAGTAATTC 58.179 34.615 0.00 0.00 0.00 2.17
1535 1590 8.200120 TCTAGATACATCCATTTCTGTGACAAG 58.800 37.037 0.00 0.00 0.00 3.16
1571 1650 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
1572 1651 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
1573 1652 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
1574 1653 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
1575 1654 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
1576 1655 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
1577 1656 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
1578 1657 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
1579 1658 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
1580 1659 7.148239 GGAATTACTTGTCTCGAAAATGGATGT 60.148 37.037 0.00 0.00 0.00 3.06
1581 1660 7.189512 GGAATTACTTGTCTCGAAAATGGATG 58.810 38.462 0.00 0.00 0.00 3.51
1583 1662 5.350365 CGGAATTACTTGTCTCGAAAATGGA 59.650 40.000 0.00 0.00 0.00 3.41
1585 1664 6.403333 TCGGAATTACTTGTCTCGAAAATG 57.597 37.500 0.00 0.00 0.00 2.32
1586 1665 6.400727 CGTTCGGAATTACTTGTCTCGAAAAT 60.401 38.462 0.00 0.00 37.00 1.82
1587 1666 5.107760 CGTTCGGAATTACTTGTCTCGAAAA 60.108 40.000 0.00 0.00 37.00 2.29
1591 1670 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
1599 1712 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1602 1715 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
1605 1718 0.679002 TGACTACTCCCTCCGTTCGG 60.679 60.000 4.74 4.74 0.00 4.30
1606 1719 1.132643 CTTGACTACTCCCTCCGTTCG 59.867 57.143 0.00 0.00 0.00 3.95
1607 1720 2.444421 TCTTGACTACTCCCTCCGTTC 58.556 52.381 0.00 0.00 0.00 3.95
1682 1797 1.538047 CACTCCCTTTCACCCACATG 58.462 55.000 0.00 0.00 0.00 3.21
1737 1860 7.148289 CGGAGAAATTTCCTACTTCTAAAACCC 60.148 40.741 14.61 0.00 34.96 4.11
1804 1927 8.547069 CAAAATTCCATGAACATGTACGTTTTT 58.453 29.630 12.74 8.66 37.11 1.94
1805 1928 7.923344 TCAAAATTCCATGAACATGTACGTTTT 59.077 29.630 12.74 10.73 37.11 2.43
1806 1929 7.429633 TCAAAATTCCATGAACATGTACGTTT 58.570 30.769 12.74 6.16 37.11 3.60
1807 1930 6.976088 TCAAAATTCCATGAACATGTACGTT 58.024 32.000 12.74 0.00 37.11 3.99
1844 1967 0.179129 GGCCCGATGCAAATTCAGTG 60.179 55.000 0.00 0.00 43.89 3.66
1910 2270 7.761249 ACTGACCTTATCATAAAAGCATTTTGC 59.239 33.333 0.00 0.00 41.23 3.68
2156 2527 1.202734 TGATTGATCCAGGCTGCTAGC 60.203 52.381 9.56 8.10 41.46 3.42
2225 2617 0.394488 TCCGTGTTGCTTTGGGTCAA 60.394 50.000 0.00 0.00 0.00 3.18
2387 2782 1.480954 TGATGTTAGAGAAGGTCCGGC 59.519 52.381 0.00 0.00 0.00 6.13
2389 2784 3.181485 GGTCTGATGTTAGAGAAGGTCCG 60.181 52.174 0.00 0.00 0.00 4.79
2416 2811 6.778821 TGTTTCTTGAAACTGATCTATGGGA 58.221 36.000 21.81 0.72 33.95 4.37
2538 2948 3.855689 CAGGTAAGTTTCCTGGCATTG 57.144 47.619 18.36 0.00 46.03 2.82
2569 2979 7.862873 GGTTTAATAATGTAAGATTGCTCCAGC 59.137 37.037 0.00 0.00 42.50 4.85
2857 3267 4.069304 TCTCCACCTTGAAACAATTACCG 58.931 43.478 0.00 0.00 0.00 4.02
2909 3319 5.915196 GTGAGGTTTGTTCTTTAGATTGCAC 59.085 40.000 0.00 0.00 0.00 4.57
2913 3323 6.016777 CAGCTGTGAGGTTTGTTCTTTAGATT 60.017 38.462 5.25 0.00 0.00 2.40
2918 3328 3.378427 GTCAGCTGTGAGGTTTGTTCTTT 59.622 43.478 14.67 0.00 31.53 2.52
3037 3447 6.702723 TGATTTTCTTGGAAAGCAATTCAGTG 59.297 34.615 4.87 0.00 45.70 3.66
3044 3454 6.701400 GCTACTTTGATTTTCTTGGAAAGCAA 59.299 34.615 1.43 1.43 45.70 3.91
3082 3492 5.845985 TCTTGTCTTTGCTCGATTTAGTG 57.154 39.130 0.00 0.00 0.00 2.74
3083 3493 6.876257 AGAATCTTGTCTTTGCTCGATTTAGT 59.124 34.615 0.00 0.00 0.00 2.24
3515 4321 7.984422 TCTCAACAATTGAAGCAATTCTAGA 57.016 32.000 13.59 0.00 41.40 2.43
3581 4387 5.178096 TGAGTAGCAATGAAGGGAATGAA 57.822 39.130 0.00 0.00 0.00 2.57
4010 5255 3.926527 GCGACCAATAGCATTATCATCGA 59.073 43.478 0.00 0.00 0.00 3.59
4077 5322 1.688735 CCATCGAGAGGAAGCCATGTA 59.311 52.381 0.47 0.00 0.00 2.29
4158 5403 8.328758 AGATAATTCATAACAACTTCAGTCCCA 58.671 33.333 0.00 0.00 0.00 4.37
4305 5551 4.533707 TGATGAATTTGTCTGAGAGGACCT 59.466 41.667 0.00 0.00 35.54 3.85
4310 5556 5.583854 ACGGAATGATGAATTTGTCTGAGAG 59.416 40.000 0.00 0.00 0.00 3.20
4527 5773 6.183360 TGTTGTACCACCACTTGTATTCACTA 60.183 38.462 0.00 0.00 0.00 2.74
4534 5780 3.908643 TGTGTTGTACCACCACTTGTA 57.091 42.857 7.79 0.00 34.35 2.41
4557 5803 1.402325 CGACACCTGCTATGTTCGTGA 60.402 52.381 0.00 0.00 0.00 4.35
4565 5811 1.134699 CACCATGTCGACACCTGCTAT 60.135 52.381 22.71 0.00 0.00 2.97
4945 6200 7.069569 CGTTTCTTTTTACTCCGCATATATGG 58.930 38.462 14.51 4.78 0.00 2.74
5037 6292 7.985476 ACCAAGTCCAGAAAAATATATCAACG 58.015 34.615 0.00 0.00 0.00 4.10
5101 6356 6.808008 ACAATGTTCAGTTTCTCGATTGAT 57.192 33.333 0.00 0.00 0.00 2.57
5788 7740 4.273480 AGTGTCTTTCTATTGTGTGTGTGC 59.727 41.667 0.00 0.00 0.00 4.57
5789 7741 5.050091 GGAGTGTCTTTCTATTGTGTGTGTG 60.050 44.000 0.00 0.00 0.00 3.82
5839 7791 5.964758 TGCATGAAAGACTTCAAACAAGTT 58.035 33.333 0.00 0.00 44.64 2.66
5870 7822 7.099266 TGTCATGTTCAGAAAAATGTTGTCT 57.901 32.000 6.88 0.00 32.69 3.41
5947 7899 3.581024 TCCACTGCATGAAAAGATTGC 57.419 42.857 0.00 0.00 36.91 3.56
5950 7902 5.623824 GCAAAGATCCACTGCATGAAAAGAT 60.624 40.000 0.00 0.00 36.09 2.40
6642 8594 6.367422 GTCGCTTCTCCTCCATATTTTGATAG 59.633 42.308 0.00 0.00 0.00 2.08
6651 8603 1.480954 GGTTGTCGCTTCTCCTCCATA 59.519 52.381 0.00 0.00 0.00 2.74
6704 8656 2.606519 TCCTCAAGGACCCACCCG 60.607 66.667 0.00 0.00 39.78 5.28
6780 8732 4.732672 TCATCAGATCCAGTCTTGACTG 57.267 45.455 20.36 20.36 34.00 3.51
6820 8772 8.326529 AGAATGTCATGATCCTGCAATATGATA 58.673 33.333 0.00 0.00 31.28 2.15
6821 8773 7.175797 AGAATGTCATGATCCTGCAATATGAT 58.824 34.615 0.00 0.00 31.28 2.45
6896 8848 3.078594 ACATGAGTTTGGTTTCAACGC 57.921 42.857 0.00 0.00 31.78 4.84
6913 8865 5.371526 CCTAACATCACCTGAATGCTACAT 58.628 41.667 0.00 0.00 0.00 2.29
6916 8868 4.037222 TCCCTAACATCACCTGAATGCTA 58.963 43.478 0.00 0.00 0.00 3.49
7137 9089 1.745489 CATCAGAGCAGCAGCAGCA 60.745 57.895 12.92 0.00 45.49 4.41
7138 9090 1.025113 TTCATCAGAGCAGCAGCAGC 61.025 55.000 3.17 0.46 45.49 5.25
7139 9091 1.450025 TTTCATCAGAGCAGCAGCAG 58.550 50.000 3.17 0.00 45.49 4.24
7176 9128 6.128526 GGAACAACATTGCAGAAGTACTAGTC 60.129 42.308 0.00 0.00 0.00 2.59
7234 9186 6.108687 TGAGCGACAGAATCAAACAATCTAT 58.891 36.000 0.00 0.00 0.00 1.98
7452 9567 3.692257 ATACACAGCTCTGCTTGAGTT 57.308 42.857 8.61 1.03 44.41 3.01
7637 9764 9.862149 TGAGTTCTGTCATTCTGGTACTATATA 57.138 33.333 0.00 0.00 0.00 0.86
7660 9787 4.492570 GCTTGATGGTCGTACGAAATTGAG 60.493 45.833 21.39 16.84 0.00 3.02
7665 9792 2.029739 TCAGCTTGATGGTCGTACGAAA 60.030 45.455 21.39 12.05 0.00 3.46
7766 9893 4.518211 GCTTCATGTAGCAATAGCCATCTT 59.482 41.667 18.39 0.00 43.56 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.