Multiple sequence alignment - TraesCS6A01G162200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G162200 chr6A 100.000 3194 0 0 1 3194 157422746 157425939 0.000000e+00 5899.0
1 TraesCS6A01G162200 chr6D 94.129 2623 83 14 1 2585 123801038 123798449 0.000000e+00 3925.0
2 TraesCS6A01G162200 chr6B 96.002 1676 52 6 875 2541 219015754 219014085 0.000000e+00 2710.0
3 TraesCS6A01G162200 chr6B 94.943 870 35 2 1 870 219016769 219015909 0.000000e+00 1354.0
4 TraesCS6A01G162200 chr3D 78.488 344 39 17 2585 2895 306032456 306032797 3.250000e-45 193.0
5 TraesCS6A01G162200 chr3D 78.614 332 24 14 2614 2910 44886860 44887179 3.270000e-40 176.0
6 TraesCS6A01G162200 chr3A 78.135 311 30 10 2620 2895 56674016 56674323 2.550000e-36 163.0
7 TraesCS6A01G162200 chr3B 76.880 359 32 20 2603 2910 543895202 543895560 4.270000e-34 156.0
8 TraesCS6A01G162200 chr3B 87.407 135 11 2 2623 2751 524763832 524763698 1.980000e-32 150.0
9 TraesCS6A01G162200 chr2A 75.466 322 40 17 2623 2910 35780811 35780495 1.560000e-23 121.0
10 TraesCS6A01G162200 chr2A 78.832 137 15 7 2605 2729 65696434 65696568 2.640000e-11 80.5
11 TraesCS6A01G162200 chr4A 74.818 274 31 21 2675 2910 621735246 621734973 4.390000e-14 89.8
12 TraesCS6A01G162200 chr5B 80.159 126 11 4 2784 2895 355682697 355682822 7.340000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G162200 chr6A 157422746 157425939 3193 False 5899 5899 100.0000 1 3194 1 chr6A.!!$F1 3193
1 TraesCS6A01G162200 chr6D 123798449 123801038 2589 True 3925 3925 94.1290 1 2585 1 chr6D.!!$R1 2584
2 TraesCS6A01G162200 chr6B 219014085 219016769 2684 True 2032 2710 95.4725 1 2541 2 chr6B.!!$R1 2540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
293 294 0.037326 CCGTTCTGTTCTGCAGGCTA 60.037 55.0 15.13 0.0 45.08 3.93 F
521 522 0.842030 TGGGGCACTCTTCCATCAGT 60.842 55.0 0.00 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1181 1329 0.244721 GGTGAAGCAAGCAATGGACC 59.755 55.0 0.0 0.0 0.00 4.46 R
2306 2488 0.252558 TTCTACCCTGTCCCAGACCC 60.253 60.0 0.0 0.0 32.44 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
104 105 4.082679 AGACACAGAGTACGTTCAAGATCC 60.083 45.833 0.00 0.00 0.00 3.36
163 164 0.942252 GGCGTTTTCTTTCGTCTGGT 59.058 50.000 0.00 0.00 0.00 4.00
167 168 3.844943 GCGTTTTCTTTCGTCTGGTTCTG 60.845 47.826 0.00 0.00 0.00 3.02
170 171 3.812156 TTCTTTCGTCTGGTTCTGTGA 57.188 42.857 0.00 0.00 0.00 3.58
175 176 0.038159 CGTCTGGTTCTGTGACTCCC 60.038 60.000 0.00 0.00 0.00 4.30
211 212 6.508880 GCGTGTCAACAATTATATCGCTGTTA 60.509 38.462 0.00 0.00 38.46 2.41
293 294 0.037326 CCGTTCTGTTCTGCAGGCTA 60.037 55.000 15.13 0.00 45.08 3.93
414 415 3.901844 TCAGGTTTAGCTAGACCACTTGT 59.098 43.478 29.56 10.60 38.42 3.16
442 443 2.100916 GGCAACCGAAGCTAGATCACTA 59.899 50.000 0.00 0.00 0.00 2.74
443 444 3.243907 GGCAACCGAAGCTAGATCACTAT 60.244 47.826 0.00 0.00 0.00 2.12
468 469 8.313944 TGGTCAAGCTACTAATACCAGAATTA 57.686 34.615 0.00 0.00 33.28 1.40
503 504 3.008330 CAACTGAGCTCCCTCTTGATTG 58.992 50.000 12.15 0.66 38.93 2.67
521 522 0.842030 TGGGGCACTCTTCCATCAGT 60.842 55.000 0.00 0.00 0.00 3.41
522 523 1.204146 GGGGCACTCTTCCATCAGTA 58.796 55.000 0.00 0.00 0.00 2.74
523 524 1.771255 GGGGCACTCTTCCATCAGTAT 59.229 52.381 0.00 0.00 0.00 2.12
524 525 2.972713 GGGGCACTCTTCCATCAGTATA 59.027 50.000 0.00 0.00 0.00 1.47
525 526 3.007398 GGGGCACTCTTCCATCAGTATAG 59.993 52.174 0.00 0.00 0.00 1.31
526 527 3.556004 GGGCACTCTTCCATCAGTATAGC 60.556 52.174 0.00 0.00 0.00 2.97
527 528 3.070159 GGCACTCTTCCATCAGTATAGCA 59.930 47.826 0.00 0.00 0.00 3.49
528 529 4.054671 GCACTCTTCCATCAGTATAGCAC 58.945 47.826 0.00 0.00 0.00 4.40
712 713 6.478673 GTCTTGGGTTTCAGTTTTACATTTGG 59.521 38.462 0.00 0.00 0.00 3.28
713 714 5.941555 TGGGTTTCAGTTTTACATTTGGT 57.058 34.783 0.00 0.00 0.00 3.67
719 720 8.192110 GGTTTCAGTTTTACATTTGGTAAGTGA 58.808 33.333 0.00 0.00 42.63 3.41
870 871 8.740906 TCAAGTGGACAAATACTGTTTGTTTTA 58.259 29.630 5.48 0.00 42.11 1.52
872 873 9.528018 AAGTGGACAAATACTGTTTGTTTTATG 57.472 29.630 5.48 0.00 42.11 1.90
914 1062 4.405358 TCCAGCATAATTCAAATCCAACCC 59.595 41.667 0.00 0.00 0.00 4.11
1098 1246 3.553828 AGGGTTGTTCTCAAGTTTCGA 57.446 42.857 0.00 0.00 33.97 3.71
1104 1252 5.292589 GGTTGTTCTCAAGTTTCGAACAGTA 59.707 40.000 13.44 2.37 45.17 2.74
1134 1282 1.005340 GGCGAGACTGCATTCAAGAG 58.995 55.000 6.84 0.00 36.28 2.85
1146 1294 3.681417 GCATTCAAGAGCCCAATTTTGTC 59.319 43.478 0.00 0.00 0.00 3.18
1305 1453 2.338809 AGGTTTCAGATGTCAGACCCA 58.661 47.619 0.00 0.00 0.00 4.51
1341 1489 4.013728 TGTGCGCCTATGATTTAAAAGGT 58.986 39.130 4.18 0.00 0.00 3.50
1383 1531 5.476599 TCCAACAACAAGGATACATTTGAGG 59.523 40.000 0.00 0.00 41.41 3.86
1398 1546 0.035881 TGAGGCTGCCAGTTTCAGAG 59.964 55.000 22.65 0.00 33.54 3.35
1401 1549 0.036010 GGCTGCCAGTTTCAGAGCTA 60.036 55.000 15.17 0.00 33.54 3.32
1410 1558 4.502259 CCAGTTTCAGAGCTACAGTCACTT 60.502 45.833 0.00 0.00 0.00 3.16
1449 1597 1.338020 GGACCTGTGCCTTCAACAAAG 59.662 52.381 0.00 0.00 34.52 2.77
2012 2160 2.427506 GATTTTCGTGGAGAGCCTTGT 58.572 47.619 0.00 0.00 34.31 3.16
2064 2212 2.421424 CAGAGCAATGCTACAAAGTCCC 59.579 50.000 8.12 0.00 39.88 4.46
2215 2368 1.291184 CTCGCAAACGCCTGACATCA 61.291 55.000 0.00 0.00 39.84 3.07
2236 2389 7.823310 ACATCATATCCATGAATAGTTCTCTGC 59.177 37.037 0.00 0.00 44.27 4.26
2335 2518 4.443621 GGACAGGGTAGAACATAAGAAGC 58.556 47.826 0.00 0.00 0.00 3.86
2359 2544 7.018235 GCAAATAAGAAAGTGTCTCTGTTAGC 58.982 38.462 0.00 0.00 34.56 3.09
2362 2547 4.946478 AGAAAGTGTCTCTGTTAGCAGT 57.054 40.909 6.47 0.00 43.05 4.40
2487 2678 3.255642 ACTGTATTCCTGCGTTGCATTTT 59.744 39.130 0.00 0.00 38.13 1.82
2493 2684 3.525537 TCCTGCGTTGCATTTTTGAAAA 58.474 36.364 0.00 0.00 38.13 2.29
2509 2700 9.729281 ATTTTTGAAAATTATGATGCCAAGACT 57.271 25.926 0.00 0.00 35.16 3.24
2522 2713 7.771183 TGATGCCAAGACTAATAATTCAAACC 58.229 34.615 0.00 0.00 0.00 3.27
2553 2744 4.498009 CCGGTTGTTGCATTTATGAGGATC 60.498 45.833 0.00 0.00 0.00 3.36
2577 2768 1.717645 GCGCTGTGCTGAAAAATGAAG 59.282 47.619 5.84 0.00 41.73 3.02
2585 2776 5.237996 TGTGCTGAAAAATGAAGACTCTGAG 59.762 40.000 2.45 2.45 0.00 3.35
2586 2777 5.468072 GTGCTGAAAAATGAAGACTCTGAGA 59.532 40.000 12.44 0.00 0.00 3.27
2587 2778 5.699915 TGCTGAAAAATGAAGACTCTGAGAG 59.300 40.000 12.44 8.15 35.52 3.20
2588 2779 5.390779 GCTGAAAAATGAAGACTCTGAGAGC 60.391 44.000 12.44 2.53 32.04 4.09
2589 2780 5.614308 TGAAAAATGAAGACTCTGAGAGCA 58.386 37.500 12.44 0.00 32.04 4.26
2590 2781 6.236409 TGAAAAATGAAGACTCTGAGAGCAT 58.764 36.000 12.44 1.88 32.04 3.79
2591 2782 6.370994 TGAAAAATGAAGACTCTGAGAGCATC 59.629 38.462 12.44 6.12 32.04 3.91
2604 2795 0.678950 GAGCATCTCTAGCAGACCCC 59.321 60.000 0.00 0.00 32.26 4.95
2605 2796 0.264359 AGCATCTCTAGCAGACCCCT 59.736 55.000 0.00 0.00 32.26 4.79
2606 2797 1.127343 GCATCTCTAGCAGACCCCTT 58.873 55.000 0.00 0.00 32.26 3.95
2607 2798 1.069978 GCATCTCTAGCAGACCCCTTC 59.930 57.143 0.00 0.00 32.26 3.46
2608 2799 2.676748 CATCTCTAGCAGACCCCTTCT 58.323 52.381 0.00 0.00 32.26 2.85
2609 2800 3.838565 CATCTCTAGCAGACCCCTTCTA 58.161 50.000 0.00 0.00 32.26 2.10
2610 2801 4.219115 CATCTCTAGCAGACCCCTTCTAA 58.781 47.826 0.00 0.00 32.26 2.10
2611 2802 3.904717 TCTCTAGCAGACCCCTTCTAAG 58.095 50.000 0.00 0.00 31.12 2.18
2612 2803 2.962421 CTCTAGCAGACCCCTTCTAAGG 59.038 54.545 1.47 1.47 46.06 2.69
2623 2814 3.708403 CCTTCTAAGGGGTTTACGGTT 57.292 47.619 0.42 0.00 42.66 4.44
2624 2815 4.025040 CCTTCTAAGGGGTTTACGGTTT 57.975 45.455 0.42 0.00 42.66 3.27
2625 2816 4.005650 CCTTCTAAGGGGTTTACGGTTTC 58.994 47.826 0.42 0.00 42.66 2.78
2626 2817 3.701205 TCTAAGGGGTTTACGGTTTCC 57.299 47.619 0.00 0.00 0.00 3.13
2627 2818 2.305635 TCTAAGGGGTTTACGGTTTCCC 59.694 50.000 6.47 6.47 39.22 3.97
2628 2819 2.872818 AGGGGTTTACGGTTTCCCT 58.127 52.632 12.34 8.83 42.74 4.20
2629 2820 0.694771 AGGGGTTTACGGTTTCCCTC 59.305 55.000 12.34 0.00 44.08 4.30
2630 2821 0.694771 GGGGTTTACGGTTTCCCTCT 59.305 55.000 12.34 0.00 39.80 3.69
2631 2822 1.074405 GGGGTTTACGGTTTCCCTCTT 59.926 52.381 12.34 0.00 39.80 2.85
2632 2823 2.305635 GGGGTTTACGGTTTCCCTCTTA 59.694 50.000 12.34 0.00 39.80 2.10
2633 2824 3.054139 GGGGTTTACGGTTTCCCTCTTAT 60.054 47.826 12.34 0.00 39.80 1.73
2634 2825 4.164030 GGGGTTTACGGTTTCCCTCTTATA 59.836 45.833 12.34 0.00 39.80 0.98
2635 2826 5.339118 GGGGTTTACGGTTTCCCTCTTATAA 60.339 44.000 12.34 0.00 39.80 0.98
2636 2827 5.819379 GGGTTTACGGTTTCCCTCTTATAAG 59.181 44.000 6.11 6.11 37.18 1.73
2637 2828 5.819379 GGTTTACGGTTTCCCTCTTATAAGG 59.181 44.000 12.54 3.66 36.08 2.69
2648 2839 3.821033 CCTCTTATAAGGGGCGAATTTGG 59.179 47.826 18.57 0.00 40.42 3.28
2649 2840 3.219281 TCTTATAAGGGGCGAATTTGGC 58.781 45.455 12.54 10.80 0.00 4.52
2650 2841 3.117663 TCTTATAAGGGGCGAATTTGGCT 60.118 43.478 18.03 2.24 34.31 4.75
2651 2842 1.402787 ATAAGGGGCGAATTTGGCTG 58.597 50.000 18.03 0.00 34.31 4.85
2652 2843 1.319614 TAAGGGGCGAATTTGGCTGC 61.320 55.000 18.03 3.35 34.31 5.25
2653 2844 4.496927 GGGGCGAATTTGGCTGCG 62.497 66.667 18.03 0.00 34.31 5.18
2654 2845 4.496927 GGGCGAATTTGGCTGCGG 62.497 66.667 18.03 0.00 34.31 5.69
2655 2846 3.747976 GGCGAATTTGGCTGCGGT 61.748 61.111 11.94 0.00 0.00 5.68
2656 2847 2.403378 GGCGAATTTGGCTGCGGTA 61.403 57.895 11.94 0.00 0.00 4.02
2657 2848 1.062525 GCGAATTTGGCTGCGGTAG 59.937 57.895 0.00 0.00 0.00 3.18
2658 2849 1.366111 GCGAATTTGGCTGCGGTAGA 61.366 55.000 0.00 0.00 0.00 2.59
2659 2850 1.083489 CGAATTTGGCTGCGGTAGAA 58.917 50.000 0.00 0.00 0.00 2.10
2660 2851 1.202031 CGAATTTGGCTGCGGTAGAAC 60.202 52.381 0.00 0.00 0.00 3.01
2661 2852 1.810151 GAATTTGGCTGCGGTAGAACA 59.190 47.619 0.00 0.00 0.00 3.18
2662 2853 1.453155 ATTTGGCTGCGGTAGAACAG 58.547 50.000 0.00 0.00 36.96 3.16
2663 2854 0.394938 TTTGGCTGCGGTAGAACAGA 59.605 50.000 0.00 0.00 35.90 3.41
2664 2855 0.394938 TTGGCTGCGGTAGAACAGAA 59.605 50.000 0.00 0.00 35.90 3.02
2665 2856 0.394938 TGGCTGCGGTAGAACAGAAA 59.605 50.000 0.00 0.00 35.90 2.52
2666 2857 0.796927 GGCTGCGGTAGAACAGAAAC 59.203 55.000 0.00 0.00 35.90 2.78
2667 2858 1.608283 GGCTGCGGTAGAACAGAAACT 60.608 52.381 0.00 0.00 35.90 2.66
2668 2859 1.461127 GCTGCGGTAGAACAGAAACTG 59.539 52.381 0.00 0.00 35.90 3.16
2669 2860 1.461127 CTGCGGTAGAACAGAAACTGC 59.539 52.381 0.00 0.00 44.14 4.40
2670 2861 1.508632 GCGGTAGAACAGAAACTGCA 58.491 50.000 0.82 0.00 43.49 4.41
2671 2862 2.076863 GCGGTAGAACAGAAACTGCAT 58.923 47.619 0.82 0.00 43.49 3.96
2672 2863 3.259064 GCGGTAGAACAGAAACTGCATA 58.741 45.455 0.82 0.00 43.49 3.14
2673 2864 3.871594 GCGGTAGAACAGAAACTGCATAT 59.128 43.478 0.82 0.00 43.49 1.78
2674 2865 4.332819 GCGGTAGAACAGAAACTGCATATT 59.667 41.667 0.82 0.00 43.49 1.28
2675 2866 5.522460 GCGGTAGAACAGAAACTGCATATTA 59.478 40.000 0.82 0.00 43.49 0.98
2676 2867 6.036735 GCGGTAGAACAGAAACTGCATATTAA 59.963 38.462 0.82 0.00 43.49 1.40
2677 2868 7.413657 GCGGTAGAACAGAAACTGCATATTAAA 60.414 37.037 0.82 0.00 43.49 1.52
2678 2869 7.903431 CGGTAGAACAGAAACTGCATATTAAAC 59.097 37.037 0.00 0.00 34.37 2.01
2679 2870 8.947115 GGTAGAACAGAAACTGCATATTAAACT 58.053 33.333 0.00 0.00 34.37 2.66
2682 2873 9.683069 AGAACAGAAACTGCATATTAAACTTTG 57.317 29.630 0.00 0.00 34.37 2.77
2683 2874 9.677567 GAACAGAAACTGCATATTAAACTTTGA 57.322 29.630 0.00 0.00 34.37 2.69
2699 2890 9.765795 TTAAACTTTGAAAAGAAAGGTTTCACA 57.234 25.926 9.71 0.00 39.36 3.58
2700 2891 8.846943 AAACTTTGAAAAGAAAGGTTTCACAT 57.153 26.923 9.71 0.00 39.36 3.21
2701 2892 7.832503 ACTTTGAAAAGAAAGGTTTCACATG 57.167 32.000 9.71 0.00 42.98 3.21
2702 2893 7.610865 ACTTTGAAAAGAAAGGTTTCACATGA 58.389 30.769 9.71 0.00 42.98 3.07
2703 2894 7.761249 ACTTTGAAAAGAAAGGTTTCACATGAG 59.239 33.333 9.71 0.00 42.98 2.90
2704 2895 7.403312 TTGAAAAGAAAGGTTTCACATGAGA 57.597 32.000 0.00 0.00 42.98 3.27
2705 2896 7.031226 TGAAAAGAAAGGTTTCACATGAGAG 57.969 36.000 0.00 0.00 39.46 3.20
2706 2897 6.828273 TGAAAAGAAAGGTTTCACATGAGAGA 59.172 34.615 0.00 0.00 39.46 3.10
2707 2898 7.503566 TGAAAAGAAAGGTTTCACATGAGAGAT 59.496 33.333 0.00 0.00 39.46 2.75
2708 2899 6.814506 AAGAAAGGTTTCACATGAGAGATG 57.185 37.500 0.00 0.00 39.61 2.90
2709 2900 6.119240 AGAAAGGTTTCACATGAGAGATGA 57.881 37.500 0.00 0.00 39.61 2.92
2710 2901 6.537355 AGAAAGGTTTCACATGAGAGATGAA 58.463 36.000 0.00 0.00 39.61 2.57
2711 2902 6.429385 AGAAAGGTTTCACATGAGAGATGAAC 59.571 38.462 0.00 0.00 39.61 3.18
2712 2903 5.233083 AGGTTTCACATGAGAGATGAACA 57.767 39.130 0.00 0.00 32.21 3.18
2713 2904 5.624159 AGGTTTCACATGAGAGATGAACAA 58.376 37.500 0.00 0.00 32.21 2.83
2714 2905 5.704515 AGGTTTCACATGAGAGATGAACAAG 59.295 40.000 0.00 0.00 32.21 3.16
2715 2906 5.702670 GGTTTCACATGAGAGATGAACAAGA 59.297 40.000 0.00 0.00 32.21 3.02
2716 2907 6.205464 GGTTTCACATGAGAGATGAACAAGAA 59.795 38.462 0.00 0.00 32.21 2.52
2717 2908 7.255242 GGTTTCACATGAGAGATGAACAAGAAA 60.255 37.037 0.00 0.00 32.21 2.52
2718 2909 6.791887 TCACATGAGAGATGAACAAGAAAC 57.208 37.500 0.00 0.00 0.00 2.78
2719 2910 6.290605 TCACATGAGAGATGAACAAGAAACA 58.709 36.000 0.00 0.00 0.00 2.83
2720 2911 6.426025 TCACATGAGAGATGAACAAGAAACAG 59.574 38.462 0.00 0.00 0.00 3.16
2721 2912 6.204301 CACATGAGAGATGAACAAGAAACAGT 59.796 38.462 0.00 0.00 0.00 3.55
2722 2913 7.386025 CACATGAGAGATGAACAAGAAACAGTA 59.614 37.037 0.00 0.00 0.00 2.74
2723 2914 7.601886 ACATGAGAGATGAACAAGAAACAGTAG 59.398 37.037 0.00 0.00 0.00 2.57
2724 2915 7.055667 TGAGAGATGAACAAGAAACAGTAGT 57.944 36.000 0.00 0.00 0.00 2.73
2725 2916 8.178313 TGAGAGATGAACAAGAAACAGTAGTA 57.822 34.615 0.00 0.00 0.00 1.82
2726 2917 8.300286 TGAGAGATGAACAAGAAACAGTAGTAG 58.700 37.037 0.00 0.00 0.00 2.57
2727 2918 8.410673 AGAGATGAACAAGAAACAGTAGTAGA 57.589 34.615 0.00 0.00 0.00 2.59
2728 2919 9.030452 AGAGATGAACAAGAAACAGTAGTAGAT 57.970 33.333 0.00 0.00 0.00 1.98
2736 2927 9.915629 ACAAGAAACAGTAGTAGATAGAAGTTG 57.084 33.333 0.00 0.00 0.00 3.16
2754 2945 8.038862 AGAAGTTGATCATTGATACATAGGGT 57.961 34.615 0.00 0.00 0.00 4.34
2755 2946 9.159254 AGAAGTTGATCATTGATACATAGGGTA 57.841 33.333 0.00 0.00 36.16 3.69
2756 2947 9.429359 GAAGTTGATCATTGATACATAGGGTAG 57.571 37.037 0.00 0.00 34.92 3.18
2757 2948 8.727100 AGTTGATCATTGATACATAGGGTAGA 57.273 34.615 0.00 0.00 34.92 2.59
2758 2949 9.331466 AGTTGATCATTGATACATAGGGTAGAT 57.669 33.333 0.00 0.00 34.92 1.98
2759 2950 9.950496 GTTGATCATTGATACATAGGGTAGATT 57.050 33.333 0.00 0.00 34.92 2.40
2761 2952 8.470002 TGATCATTGATACATAGGGTAGATTCG 58.530 37.037 0.00 0.00 34.92 3.34
2762 2953 7.776618 TCATTGATACATAGGGTAGATTCGT 57.223 36.000 0.00 0.00 34.92 3.85
2763 2954 7.827701 TCATTGATACATAGGGTAGATTCGTC 58.172 38.462 0.00 0.00 34.92 4.20
2764 2955 5.874895 TGATACATAGGGTAGATTCGTCG 57.125 43.478 0.00 0.00 34.92 5.12
2765 2956 5.554070 TGATACATAGGGTAGATTCGTCGA 58.446 41.667 0.00 0.00 34.92 4.20
2766 2957 5.999600 TGATACATAGGGTAGATTCGTCGAA 59.000 40.000 10.61 10.61 34.92 3.71
2767 2958 4.832590 ACATAGGGTAGATTCGTCGAAG 57.167 45.455 13.88 0.00 0.00 3.79
2768 2959 3.004524 ACATAGGGTAGATTCGTCGAAGC 59.995 47.826 15.18 15.18 0.00 3.86
2769 2960 1.471119 AGGGTAGATTCGTCGAAGCA 58.529 50.000 23.72 8.38 29.60 3.91
2770 2961 2.032620 AGGGTAGATTCGTCGAAGCAT 58.967 47.619 23.72 12.01 29.60 3.79
2771 2962 2.034812 AGGGTAGATTCGTCGAAGCATC 59.965 50.000 23.72 15.35 29.60 3.91
2780 2971 4.327885 CGAAGCATCGGACTAGCC 57.672 61.111 2.82 0.00 45.32 3.93
2781 2972 1.736586 CGAAGCATCGGACTAGCCT 59.263 57.895 2.82 0.00 45.32 4.58
2782 2973 0.103208 CGAAGCATCGGACTAGCCTT 59.897 55.000 2.82 0.00 45.32 4.35
2783 2974 1.337071 CGAAGCATCGGACTAGCCTTA 59.663 52.381 2.82 0.00 45.32 2.69
2784 2975 2.223735 CGAAGCATCGGACTAGCCTTAA 60.224 50.000 2.82 0.00 45.32 1.85
2785 2976 2.892784 AGCATCGGACTAGCCTTAAC 57.107 50.000 0.00 0.00 0.00 2.01
2786 2977 2.389715 AGCATCGGACTAGCCTTAACT 58.610 47.619 0.00 0.00 0.00 2.24
2787 2978 2.101582 AGCATCGGACTAGCCTTAACTG 59.898 50.000 0.00 0.00 0.00 3.16
2788 2979 2.474816 CATCGGACTAGCCTTAACTGC 58.525 52.381 0.00 0.00 0.00 4.40
2789 2980 0.822164 TCGGACTAGCCTTAACTGCC 59.178 55.000 0.00 0.00 0.00 4.85
2790 2981 0.179081 CGGACTAGCCTTAACTGCCC 60.179 60.000 0.00 0.00 0.00 5.36
2791 2982 0.909623 GGACTAGCCTTAACTGCCCA 59.090 55.000 0.00 0.00 0.00 5.36
2792 2983 1.280998 GGACTAGCCTTAACTGCCCAA 59.719 52.381 0.00 0.00 0.00 4.12
2793 2984 2.290705 GGACTAGCCTTAACTGCCCAAA 60.291 50.000 0.00 0.00 0.00 3.28
2794 2985 3.418047 GACTAGCCTTAACTGCCCAAAA 58.582 45.455 0.00 0.00 0.00 2.44
2795 2986 4.017126 GACTAGCCTTAACTGCCCAAAAT 58.983 43.478 0.00 0.00 0.00 1.82
2796 2987 3.763897 ACTAGCCTTAACTGCCCAAAATG 59.236 43.478 0.00 0.00 0.00 2.32
2797 2988 1.901833 AGCCTTAACTGCCCAAAATGG 59.098 47.619 0.00 0.00 37.25 3.16
2807 2998 2.118132 CCAAAATGGGGCTCATCGG 58.882 57.895 0.00 0.00 34.44 4.18
2808 2999 0.395586 CCAAAATGGGGCTCATCGGA 60.396 55.000 0.00 0.00 34.44 4.55
2809 3000 1.027357 CAAAATGGGGCTCATCGGAG 58.973 55.000 0.00 0.00 44.33 4.63
2839 3030 4.557605 CGCGGCATGGTGGCAATC 62.558 66.667 0.00 0.00 43.94 2.67
2840 3031 3.451004 GCGGCATGGTGGCAATCA 61.451 61.111 0.00 0.00 43.94 2.57
2841 3032 2.491152 CGGCATGGTGGCAATCAC 59.509 61.111 4.39 0.00 43.94 3.06
2842 3033 2.048023 CGGCATGGTGGCAATCACT 61.048 57.895 4.39 0.00 43.94 3.41
2843 3034 1.811860 GGCATGGTGGCAATCACTC 59.188 57.895 0.00 0.00 45.38 3.51
2844 3035 1.669999 GGCATGGTGGCAATCACTCC 61.670 60.000 0.00 0.00 45.38 3.85
2845 3036 0.682209 GCATGGTGGCAATCACTCCT 60.682 55.000 0.00 0.00 45.38 3.69
2846 3037 1.386533 CATGGTGGCAATCACTCCTC 58.613 55.000 0.00 0.00 45.38 3.71
2847 3038 0.257039 ATGGTGGCAATCACTCCTCC 59.743 55.000 0.00 0.00 45.38 4.30
2848 3039 0.842030 TGGTGGCAATCACTCCTCCT 60.842 55.000 0.00 0.00 45.38 3.69
2849 3040 0.107459 GGTGGCAATCACTCCTCCTC 60.107 60.000 0.00 0.00 45.38 3.71
2850 3041 0.460987 GTGGCAATCACTCCTCCTCG 60.461 60.000 0.00 0.00 42.86 4.63
2851 3042 0.904865 TGGCAATCACTCCTCCTCGT 60.905 55.000 0.00 0.00 0.00 4.18
2852 3043 0.179097 GGCAATCACTCCTCCTCGTC 60.179 60.000 0.00 0.00 0.00 4.20
2853 3044 0.526524 GCAATCACTCCTCCTCGTCG 60.527 60.000 0.00 0.00 0.00 5.12
2854 3045 0.101399 CAATCACTCCTCCTCGTCGG 59.899 60.000 0.00 0.00 0.00 4.79
2855 3046 0.034380 AATCACTCCTCCTCGTCGGA 60.034 55.000 0.00 0.00 40.30 4.55
2864 3055 3.188965 CTCGTCGGAGGTGAGGTC 58.811 66.667 0.00 0.00 36.61 3.85
2865 3056 2.745100 TCGTCGGAGGTGAGGTCG 60.745 66.667 0.00 0.00 0.00 4.79
2866 3057 2.745100 CGTCGGAGGTGAGGTCGA 60.745 66.667 0.00 0.00 0.00 4.20
2867 3058 2.113433 CGTCGGAGGTGAGGTCGAT 61.113 63.158 0.00 0.00 34.13 3.59
2868 3059 1.433879 GTCGGAGGTGAGGTCGATG 59.566 63.158 0.00 0.00 34.13 3.84
2869 3060 1.030488 GTCGGAGGTGAGGTCGATGA 61.030 60.000 0.00 0.00 34.13 2.92
2870 3061 0.323087 TCGGAGGTGAGGTCGATGAA 60.323 55.000 0.00 0.00 0.00 2.57
2871 3062 0.179134 CGGAGGTGAGGTCGATGAAC 60.179 60.000 0.00 0.00 0.00 3.18
2872 3063 0.895530 GGAGGTGAGGTCGATGAACA 59.104 55.000 0.00 0.00 0.00 3.18
2873 3064 1.482593 GGAGGTGAGGTCGATGAACAT 59.517 52.381 0.00 0.00 0.00 2.71
2874 3065 2.544685 GAGGTGAGGTCGATGAACATG 58.455 52.381 0.00 0.00 0.00 3.21
2875 3066 1.208052 AGGTGAGGTCGATGAACATGG 59.792 52.381 0.00 0.00 0.00 3.66
2876 3067 1.207089 GGTGAGGTCGATGAACATGGA 59.793 52.381 0.00 0.00 0.00 3.41
2877 3068 2.544685 GTGAGGTCGATGAACATGGAG 58.455 52.381 0.00 0.00 0.00 3.86
2878 3069 2.093973 GTGAGGTCGATGAACATGGAGT 60.094 50.000 0.00 0.00 0.00 3.85
2879 3070 2.166459 TGAGGTCGATGAACATGGAGTC 59.834 50.000 0.00 2.25 0.00 3.36
2880 3071 2.428890 GAGGTCGATGAACATGGAGTCT 59.571 50.000 0.00 2.22 0.00 3.24
2881 3072 2.834549 AGGTCGATGAACATGGAGTCTT 59.165 45.455 0.00 0.00 0.00 3.01
2882 3073 2.932614 GGTCGATGAACATGGAGTCTTG 59.067 50.000 0.00 0.00 0.00 3.02
2883 3074 3.589988 GTCGATGAACATGGAGTCTTGT 58.410 45.455 0.00 0.00 33.41 3.16
2884 3075 3.369147 GTCGATGAACATGGAGTCTTGTG 59.631 47.826 0.00 0.00 32.53 3.33
2885 3076 2.094894 CGATGAACATGGAGTCTTGTGC 59.905 50.000 0.00 0.15 32.53 4.57
2886 3077 1.511850 TGAACATGGAGTCTTGTGCG 58.488 50.000 0.00 0.00 31.24 5.34
2887 3078 1.202639 TGAACATGGAGTCTTGTGCGT 60.203 47.619 0.00 0.00 31.24 5.24
2888 3079 1.461127 GAACATGGAGTCTTGTGCGTC 59.539 52.381 0.00 0.00 32.53 5.19
2889 3080 0.667487 ACATGGAGTCTTGTGCGTCG 60.667 55.000 0.00 0.00 31.23 5.12
2890 3081 1.079819 ATGGAGTCTTGTGCGTCGG 60.080 57.895 0.00 0.00 0.00 4.79
2891 3082 3.112709 GGAGTCTTGTGCGTCGGC 61.113 66.667 0.00 0.00 40.52 5.54
2892 3083 2.049063 GAGTCTTGTGCGTCGGCT 60.049 61.111 0.00 0.00 40.82 5.52
2893 3084 1.664965 GAGTCTTGTGCGTCGGCTT 60.665 57.895 0.00 0.00 40.82 4.35
2894 3085 1.618640 GAGTCTTGTGCGTCGGCTTC 61.619 60.000 0.00 0.00 40.82 3.86
2895 3086 1.954146 GTCTTGTGCGTCGGCTTCA 60.954 57.895 0.00 0.00 40.82 3.02
2896 3087 1.005037 TCTTGTGCGTCGGCTTCAT 60.005 52.632 0.00 0.00 40.82 2.57
2897 3088 1.133253 CTTGTGCGTCGGCTTCATG 59.867 57.895 0.00 0.00 40.82 3.07
2898 3089 2.244436 CTTGTGCGTCGGCTTCATGG 62.244 60.000 0.00 0.00 40.82 3.66
2899 3090 2.742372 GTGCGTCGGCTTCATGGT 60.742 61.111 0.00 0.00 40.82 3.55
2900 3091 2.741985 TGCGTCGGCTTCATGGTG 60.742 61.111 0.00 0.00 40.82 4.17
2901 3092 4.166011 GCGTCGGCTTCATGGTGC 62.166 66.667 0.00 0.00 35.83 5.01
2902 3093 3.499737 CGTCGGCTTCATGGTGCC 61.500 66.667 16.51 16.51 45.25 5.01
2907 3098 4.120331 GCTTCATGGTGCCACGCC 62.120 66.667 0.00 0.00 34.12 5.68
2908 3099 2.360350 CTTCATGGTGCCACGCCT 60.360 61.111 0.00 0.00 34.70 5.52
2909 3100 2.359850 TTCATGGTGCCACGCCTC 60.360 61.111 0.00 0.00 34.70 4.70
2910 3101 4.758251 TCATGGTGCCACGCCTCG 62.758 66.667 0.00 0.00 34.70 4.63
2917 3108 4.821589 GCCACGCCTCGGAAGGAG 62.822 72.222 0.00 0.00 46.67 3.69
2918 3109 4.821589 CCACGCCTCGGAAGGAGC 62.822 72.222 0.00 0.00 45.73 4.70
2922 3113 4.459089 GCCTCGGAAGGAGCGCTT 62.459 66.667 13.26 0.00 46.67 4.68
2923 3114 2.202810 CCTCGGAAGGAGCGCTTC 60.203 66.667 13.26 10.56 46.67 3.86
2924 3115 3.724914 CCTCGGAAGGAGCGCTTCC 62.725 68.421 13.26 14.56 46.67 3.46
2952 3143 2.742372 GGCGGCGACACATCACTT 60.742 61.111 12.98 0.00 0.00 3.16
2953 3144 2.476051 GCGGCGACACATCACTTG 59.524 61.111 12.98 0.00 0.00 3.16
2954 3145 2.476051 CGGCGACACATCACTTGC 59.524 61.111 0.00 0.00 0.00 4.01
2955 3146 2.316867 CGGCGACACATCACTTGCA 61.317 57.895 0.00 0.00 0.00 4.08
2956 3147 1.840630 CGGCGACACATCACTTGCAA 61.841 55.000 0.00 0.00 0.00 4.08
2957 3148 0.523072 GGCGACACATCACTTGCAAT 59.477 50.000 0.00 0.00 0.00 3.56
2958 3149 1.466360 GGCGACACATCACTTGCAATC 60.466 52.381 0.00 0.00 0.00 2.67
2959 3150 1.466167 GCGACACATCACTTGCAATCT 59.534 47.619 0.00 0.00 0.00 2.40
2960 3151 2.095567 GCGACACATCACTTGCAATCTT 60.096 45.455 0.00 0.00 0.00 2.40
2961 3152 3.610114 GCGACACATCACTTGCAATCTTT 60.610 43.478 0.00 0.00 0.00 2.52
2962 3153 3.910170 CGACACATCACTTGCAATCTTTG 59.090 43.478 0.00 0.00 0.00 2.77
2963 3154 4.555313 CGACACATCACTTGCAATCTTTGT 60.555 41.667 0.00 0.00 0.00 2.83
2964 3155 4.863491 ACACATCACTTGCAATCTTTGTC 58.137 39.130 0.00 0.00 0.00 3.18
2965 3156 4.338964 ACACATCACTTGCAATCTTTGTCA 59.661 37.500 0.00 0.00 0.00 3.58
2966 3157 5.010314 ACACATCACTTGCAATCTTTGTCAT 59.990 36.000 0.00 0.00 0.00 3.06
2967 3158 5.924254 CACATCACTTGCAATCTTTGTCATT 59.076 36.000 0.00 0.00 0.00 2.57
2968 3159 5.924254 ACATCACTTGCAATCTTTGTCATTG 59.076 36.000 0.00 0.00 34.80 2.82
2969 3160 5.518848 TCACTTGCAATCTTTGTCATTGT 57.481 34.783 0.00 0.00 34.27 2.71
2970 3161 5.522456 TCACTTGCAATCTTTGTCATTGTC 58.478 37.500 0.00 0.00 34.27 3.18
2971 3162 5.067544 TCACTTGCAATCTTTGTCATTGTCA 59.932 36.000 0.00 0.00 34.27 3.58
2972 3163 5.174398 CACTTGCAATCTTTGTCATTGTCAC 59.826 40.000 0.00 0.00 34.27 3.67
2973 3164 4.241590 TGCAATCTTTGTCATTGTCACC 57.758 40.909 0.00 0.00 34.27 4.02
2974 3165 3.635836 TGCAATCTTTGTCATTGTCACCA 59.364 39.130 0.00 0.00 34.27 4.17
2975 3166 4.281435 TGCAATCTTTGTCATTGTCACCAT 59.719 37.500 0.00 0.00 34.27 3.55
2976 3167 4.860907 GCAATCTTTGTCATTGTCACCATC 59.139 41.667 0.00 0.00 34.27 3.51
2977 3168 5.565242 GCAATCTTTGTCATTGTCACCATCA 60.565 40.000 0.00 0.00 34.27 3.07
2978 3169 5.633830 ATCTTTGTCATTGTCACCATCAC 57.366 39.130 0.00 0.00 0.00 3.06
2979 3170 3.820467 TCTTTGTCATTGTCACCATCACC 59.180 43.478 0.00 0.00 0.00 4.02
2980 3171 3.507162 TTGTCATTGTCACCATCACCT 57.493 42.857 0.00 0.00 0.00 4.00
2981 3172 3.507162 TGTCATTGTCACCATCACCTT 57.493 42.857 0.00 0.00 0.00 3.50
2982 3173 3.148412 TGTCATTGTCACCATCACCTTG 58.852 45.455 0.00 0.00 0.00 3.61
2983 3174 2.095059 GTCATTGTCACCATCACCTTGC 60.095 50.000 0.00 0.00 0.00 4.01
2984 3175 1.135603 CATTGTCACCATCACCTTGCG 60.136 52.381 0.00 0.00 0.00 4.85
2985 3176 1.514678 TTGTCACCATCACCTTGCGC 61.515 55.000 0.00 0.00 0.00 6.09
2986 3177 1.672356 GTCACCATCACCTTGCGCT 60.672 57.895 9.73 0.00 0.00 5.92
2987 3178 1.375908 TCACCATCACCTTGCGCTC 60.376 57.895 9.73 0.00 0.00 5.03
2988 3179 2.045926 ACCATCACCTTGCGCTCC 60.046 61.111 9.73 0.00 0.00 4.70
2989 3180 2.046023 CCATCACCTTGCGCTCCA 60.046 61.111 9.73 0.00 0.00 3.86
2990 3181 2.401766 CCATCACCTTGCGCTCCAC 61.402 63.158 9.73 0.00 0.00 4.02
2991 3182 1.672030 CATCACCTTGCGCTCCACA 60.672 57.895 9.73 0.00 0.00 4.17
2992 3183 1.028330 CATCACCTTGCGCTCCACAT 61.028 55.000 9.73 0.00 0.00 3.21
2993 3184 0.745845 ATCACCTTGCGCTCCACATC 60.746 55.000 9.73 0.00 0.00 3.06
2994 3185 2.045926 ACCTTGCGCTCCACATCC 60.046 61.111 9.73 0.00 0.00 3.51
2995 3186 2.825836 CCTTGCGCTCCACATCCC 60.826 66.667 9.73 0.00 0.00 3.85
2996 3187 2.046023 CTTGCGCTCCACATCCCA 60.046 61.111 9.73 0.00 0.00 4.37
2997 3188 2.359850 TTGCGCTCCACATCCCAC 60.360 61.111 9.73 0.00 0.00 4.61
2998 3189 4.758251 TGCGCTCCACATCCCACG 62.758 66.667 9.73 0.00 0.00 4.94
3001 3192 4.408821 GCTCCACATCCCACGCCA 62.409 66.667 0.00 0.00 0.00 5.69
3002 3193 2.436646 CTCCACATCCCACGCCAC 60.437 66.667 0.00 0.00 0.00 5.01
3003 3194 3.245346 TCCACATCCCACGCCACA 61.245 61.111 0.00 0.00 0.00 4.17
3004 3195 2.045045 CCACATCCCACGCCACAT 60.045 61.111 0.00 0.00 0.00 3.21
3005 3196 2.409055 CCACATCCCACGCCACATG 61.409 63.158 0.00 0.00 0.00 3.21
3006 3197 1.377072 CACATCCCACGCCACATGA 60.377 57.895 0.00 0.00 0.00 3.07
3007 3198 1.078214 ACATCCCACGCCACATGAG 60.078 57.895 0.00 0.00 0.00 2.90
3008 3199 1.820906 CATCCCACGCCACATGAGG 60.821 63.158 4.57 4.57 0.00 3.86
3016 3207 4.631773 CCACATGAGGCAGAGTGG 57.368 61.111 0.00 0.00 44.72 4.00
3017 3208 1.681666 CCACATGAGGCAGAGTGGT 59.318 57.895 0.00 0.00 44.95 4.16
3018 3209 0.675837 CCACATGAGGCAGAGTGGTG 60.676 60.000 0.00 0.00 44.95 4.17
3019 3210 0.322648 CACATGAGGCAGAGTGGTGA 59.677 55.000 0.00 0.00 0.00 4.02
3020 3211 0.322975 ACATGAGGCAGAGTGGTGAC 59.677 55.000 0.00 0.00 0.00 3.67
3021 3212 0.738762 CATGAGGCAGAGTGGTGACG 60.739 60.000 0.00 0.00 0.00 4.35
3022 3213 1.892819 ATGAGGCAGAGTGGTGACGG 61.893 60.000 0.00 0.00 0.00 4.79
3023 3214 2.203640 AGGCAGAGTGGTGACGGA 60.204 61.111 0.00 0.00 0.00 4.69
3024 3215 1.608717 GAGGCAGAGTGGTGACGGAT 61.609 60.000 0.00 0.00 0.00 4.18
3025 3216 1.194781 AGGCAGAGTGGTGACGGATT 61.195 55.000 0.00 0.00 0.00 3.01
3026 3217 0.321653 GGCAGAGTGGTGACGGATTT 60.322 55.000 0.00 0.00 0.00 2.17
3027 3218 0.798776 GCAGAGTGGTGACGGATTTG 59.201 55.000 0.00 0.00 0.00 2.32
3028 3219 1.878102 GCAGAGTGGTGACGGATTTGT 60.878 52.381 0.00 0.00 0.00 2.83
3029 3220 2.069273 CAGAGTGGTGACGGATTTGTC 58.931 52.381 0.00 0.00 39.37 3.18
3030 3221 1.068474 GAGTGGTGACGGATTTGTCG 58.932 55.000 0.00 0.00 41.87 4.35
3031 3222 0.949105 AGTGGTGACGGATTTGTCGC 60.949 55.000 0.00 0.00 46.16 5.19
3033 3224 3.960237 GTGACGGATTTGTCGCCA 58.040 55.556 0.00 0.00 42.21 5.69
3034 3225 2.240230 GTGACGGATTTGTCGCCAA 58.760 52.632 0.00 0.00 42.21 4.52
3035 3226 0.589223 GTGACGGATTTGTCGCCAAA 59.411 50.000 0.00 0.00 44.27 3.28
3036 3227 0.871722 TGACGGATTTGTCGCCAAAG 59.128 50.000 0.00 0.00 43.45 2.77
3037 3228 0.872388 GACGGATTTGTCGCCAAAGT 59.128 50.000 0.00 0.00 43.45 2.66
3038 3229 0.872388 ACGGATTTGTCGCCAAAGTC 59.128 50.000 0.00 0.00 43.45 3.01
3039 3230 0.179225 CGGATTTGTCGCCAAAGTCG 60.179 55.000 0.00 0.33 43.45 4.18
3040 3231 0.454452 GGATTTGTCGCCAAAGTCGC 60.454 55.000 0.00 0.00 43.45 5.19
3046 3237 3.309675 CGCCAAAGTCGCGGATAG 58.690 61.111 6.13 0.00 45.80 2.08
3047 3238 2.237751 CGCCAAAGTCGCGGATAGG 61.238 63.158 6.13 3.55 45.80 2.57
3048 3239 1.887707 GCCAAAGTCGCGGATAGGG 60.888 63.158 6.13 4.33 0.00 3.53
3049 3240 1.227556 CCAAAGTCGCGGATAGGGG 60.228 63.158 6.13 0.00 0.00 4.79
3050 3241 1.520666 CAAAGTCGCGGATAGGGGT 59.479 57.895 6.13 0.00 0.00 4.95
3051 3242 0.810031 CAAAGTCGCGGATAGGGGTG 60.810 60.000 6.13 0.00 0.00 4.61
3052 3243 1.968050 AAAGTCGCGGATAGGGGTGG 61.968 60.000 6.13 0.00 0.00 4.61
3053 3244 4.603946 GTCGCGGATAGGGGTGGC 62.604 72.222 6.13 0.00 0.00 5.01
3057 3248 3.925090 CGGATAGGGGTGGCCGTC 61.925 72.222 0.00 0.00 38.99 4.79
3058 3249 3.925090 GGATAGGGGTGGCCGTCG 61.925 72.222 0.00 0.00 0.00 5.12
3059 3250 3.925090 GATAGGGGTGGCCGTCGG 61.925 72.222 6.99 6.99 0.00 4.79
3069 3260 4.223964 GCCGTCGGCGAGAAATGC 62.224 66.667 22.50 0.00 39.62 3.56
3070 3261 3.913573 CCGTCGGCGAGAAATGCG 61.914 66.667 12.93 9.33 41.33 4.73
3071 3262 2.878991 CGTCGGCGAGAAATGCGA 60.879 61.111 11.20 0.00 41.33 5.10
3072 3263 2.849966 CGTCGGCGAGAAATGCGAG 61.850 63.158 11.20 0.00 41.33 5.03
3073 3264 1.805945 GTCGGCGAGAAATGCGAGT 60.806 57.895 11.20 0.00 0.00 4.18
3074 3265 1.805539 TCGGCGAGAAATGCGAGTG 60.806 57.895 4.99 0.00 0.00 3.51
3075 3266 2.401195 GGCGAGAAATGCGAGTGC 59.599 61.111 0.00 0.00 43.20 4.40
3085 3276 4.368391 GCGAGTGCATAGGGATGG 57.632 61.111 0.00 0.00 42.15 3.51
3086 3277 1.748403 GCGAGTGCATAGGGATGGA 59.252 57.895 0.00 0.00 42.15 3.41
3087 3278 0.322975 GCGAGTGCATAGGGATGGAT 59.677 55.000 0.00 0.00 42.15 3.41
3088 3279 1.271054 GCGAGTGCATAGGGATGGATT 60.271 52.381 0.00 0.00 42.15 3.01
3089 3280 2.420642 CGAGTGCATAGGGATGGATTG 58.579 52.381 0.00 0.00 35.65 2.67
3090 3281 2.157738 GAGTGCATAGGGATGGATTGC 58.842 52.381 0.00 0.00 35.65 3.56
3091 3282 0.877071 GTGCATAGGGATGGATTGCG 59.123 55.000 0.00 0.00 35.65 4.85
3092 3283 0.250858 TGCATAGGGATGGATTGCGG 60.251 55.000 0.00 0.00 36.11 5.69
3093 3284 1.589716 GCATAGGGATGGATTGCGGC 61.590 60.000 0.00 0.00 33.26 6.53
3094 3285 0.962356 CATAGGGATGGATTGCGGCC 60.962 60.000 0.00 0.00 0.00 6.13
3095 3286 2.469465 ATAGGGATGGATTGCGGCCG 62.469 60.000 24.05 24.05 0.00 6.13
3096 3287 4.875713 GGGATGGATTGCGGCCGT 62.876 66.667 28.70 6.76 0.00 5.68
3097 3288 3.585990 GGATGGATTGCGGCCGTG 61.586 66.667 28.70 0.00 0.00 4.94
3098 3289 3.585990 GATGGATTGCGGCCGTGG 61.586 66.667 28.70 0.00 0.00 4.94
3099 3290 4.424711 ATGGATTGCGGCCGTGGT 62.425 61.111 28.70 12.77 0.00 4.16
3100 3291 2.933878 GATGGATTGCGGCCGTGGTA 62.934 60.000 28.70 10.09 0.00 3.25
3101 3292 2.437002 GGATTGCGGCCGTGGTAA 60.437 61.111 28.70 16.93 0.00 2.85
3102 3293 2.041686 GGATTGCGGCCGTGGTAAA 61.042 57.895 28.70 13.83 0.00 2.01
3103 3294 1.587933 GGATTGCGGCCGTGGTAAAA 61.588 55.000 28.70 12.02 0.00 1.52
3104 3295 0.179174 GATTGCGGCCGTGGTAAAAG 60.179 55.000 28.70 0.00 0.00 2.27
3105 3296 1.591504 ATTGCGGCCGTGGTAAAAGG 61.592 55.000 28.70 0.00 0.00 3.11
3106 3297 3.436924 GCGGCCGTGGTAAAAGGG 61.437 66.667 28.70 0.00 0.00 3.95
3107 3298 2.748647 CGGCCGTGGTAAAAGGGG 60.749 66.667 19.50 0.00 0.00 4.79
3108 3299 3.066190 GGCCGTGGTAAAAGGGGC 61.066 66.667 0.00 0.00 42.46 5.80
3109 3300 2.035155 GCCGTGGTAAAAGGGGCT 59.965 61.111 0.00 0.00 40.59 5.19
3110 3301 2.340328 GCCGTGGTAAAAGGGGCTG 61.340 63.158 0.00 0.00 40.59 4.85
3111 3302 2.340328 CCGTGGTAAAAGGGGCTGC 61.340 63.158 0.00 0.00 0.00 5.25
3112 3303 2.340328 CGTGGTAAAAGGGGCTGCC 61.340 63.158 11.05 11.05 0.00 4.85
3113 3304 1.228737 GTGGTAAAAGGGGCTGCCA 60.229 57.895 22.05 0.00 0.00 4.92
3114 3305 1.228737 TGGTAAAAGGGGCTGCCAC 60.229 57.895 22.05 18.62 0.00 5.01
3115 3306 1.982395 GGTAAAAGGGGCTGCCACC 60.982 63.158 19.26 17.23 0.00 4.61
3116 3307 1.076727 GTAAAAGGGGCTGCCACCT 59.923 57.895 19.26 19.28 39.21 4.00
3117 3308 1.076549 TAAAAGGGGCTGCCACCTG 59.923 57.895 23.77 0.00 37.13 4.00
3118 3309 1.725169 TAAAAGGGGCTGCCACCTGT 61.725 55.000 23.77 17.98 37.13 4.00
3119 3310 1.725169 AAAAGGGGCTGCCACCTGTA 61.725 55.000 23.77 0.00 37.13 2.74
3120 3311 1.509548 AAAGGGGCTGCCACCTGTAT 61.510 55.000 23.77 13.57 37.13 2.29
3121 3312 0.623324 AAGGGGCTGCCACCTGTATA 60.623 55.000 23.77 0.00 37.13 1.47
3122 3313 1.148498 GGGGCTGCCACCTGTATAC 59.852 63.158 22.05 0.00 0.00 1.47
3123 3314 1.148498 GGGCTGCCACCTGTATACC 59.852 63.158 22.05 0.00 0.00 2.73
3124 3315 1.227556 GGCTGCCACCTGTATACCG 60.228 63.158 15.17 0.00 0.00 4.02
3125 3316 1.887707 GCTGCCACCTGTATACCGC 60.888 63.158 0.00 0.00 0.00 5.68
3126 3317 1.227556 CTGCCACCTGTATACCGCC 60.228 63.158 0.00 0.00 0.00 6.13
3127 3318 2.110420 GCCACCTGTATACCGCCC 59.890 66.667 0.00 0.00 0.00 6.13
3128 3319 2.420043 CCACCTGTATACCGCCCG 59.580 66.667 0.00 0.00 0.00 6.13
3129 3320 2.279918 CACCTGTATACCGCCCGC 60.280 66.667 0.00 0.00 0.00 6.13
3130 3321 3.908081 ACCTGTATACCGCCCGCG 61.908 66.667 0.00 0.00 39.44 6.46
3156 3347 3.354467 GGTAGATATACCGTCCAGAGGG 58.646 54.545 0.00 4.86 41.83 4.30
3157 3348 2.606751 AGATATACCGTCCAGAGGGG 57.393 55.000 10.90 0.00 40.49 4.79
3158 3349 0.896226 GATATACCGTCCAGAGGGGC 59.104 60.000 10.90 0.00 40.49 5.80
3165 3356 2.482326 GTCCAGAGGGGCGATTTTG 58.518 57.895 0.00 0.00 36.21 2.44
3166 3357 0.322546 GTCCAGAGGGGCGATTTTGT 60.323 55.000 0.00 0.00 36.21 2.83
3167 3358 0.322456 TCCAGAGGGGCGATTTTGTG 60.322 55.000 0.00 0.00 36.21 3.33
3168 3359 1.315257 CCAGAGGGGCGATTTTGTGG 61.315 60.000 0.00 0.00 0.00 4.17
3169 3360 1.000896 AGAGGGGCGATTTTGTGGG 60.001 57.895 0.00 0.00 0.00 4.61
3170 3361 2.679996 AGGGGCGATTTTGTGGGC 60.680 61.111 0.00 0.00 0.00 5.36
3173 3364 2.261361 GGCGATTTTGTGGGCCAC 59.739 61.111 29.75 29.75 44.91 5.01
3174 3365 2.275380 GGCGATTTTGTGGGCCACT 61.275 57.895 34.69 17.05 44.91 4.00
3175 3366 1.080569 GCGATTTTGTGGGCCACTG 60.081 57.895 34.69 18.62 35.11 3.66
3176 3367 1.805428 GCGATTTTGTGGGCCACTGT 61.805 55.000 34.69 18.80 35.11 3.55
3177 3368 1.529226 CGATTTTGTGGGCCACTGTA 58.471 50.000 34.69 20.45 35.11 2.74
3178 3369 1.883275 CGATTTTGTGGGCCACTGTAA 59.117 47.619 34.69 24.71 35.11 2.41
3179 3370 2.294791 CGATTTTGTGGGCCACTGTAAA 59.705 45.455 34.69 28.38 35.11 2.01
3180 3371 3.649073 GATTTTGTGGGCCACTGTAAAC 58.351 45.455 34.69 20.17 35.11 2.01
3181 3372 1.404843 TTTGTGGGCCACTGTAAACC 58.595 50.000 34.69 8.91 35.11 3.27
3182 3373 0.820074 TTGTGGGCCACTGTAAACCG 60.820 55.000 34.69 0.00 35.11 4.44
3183 3374 1.228033 GTGGGCCACTGTAAACCGT 60.228 57.895 29.22 0.00 0.00 4.83
3184 3375 0.820482 GTGGGCCACTGTAAACCGTT 60.820 55.000 29.22 0.00 0.00 4.44
3185 3376 0.106619 TGGGCCACTGTAAACCGTTT 60.107 50.000 0.00 1.40 0.00 3.60
3186 3377 1.142465 TGGGCCACTGTAAACCGTTTA 59.858 47.619 0.00 0.00 0.00 2.01
3187 3378 1.536766 GGGCCACTGTAAACCGTTTAC 59.463 52.381 22.19 22.19 44.43 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
104 105 1.737838 TATCTTCACGGCTTTGCTGG 58.262 50.000 3.35 0.00 39.57 4.85
163 164 3.427573 TGATTCGTAGGGAGTCACAGAA 58.572 45.455 0.00 0.00 36.58 3.02
167 168 2.474816 GCATGATTCGTAGGGAGTCAC 58.525 52.381 0.00 0.00 43.19 3.67
170 171 1.112113 ACGCATGATTCGTAGGGAGT 58.888 50.000 0.00 0.00 38.52 3.85
175 176 2.666022 TGTTGACACGCATGATTCGTAG 59.334 45.455 0.00 0.00 38.19 3.51
211 212 2.629617 CAGGAAGGAACCAGCATGTTTT 59.370 45.455 0.00 0.00 0.00 2.43
293 294 3.254166 CAGCAGCAGAACACATTTAAGGT 59.746 43.478 0.00 0.00 0.00 3.50
318 319 8.859236 AGTTAGTAAAACTTTTCCTGATACCC 57.141 34.615 0.00 0.00 0.00 3.69
358 359 6.817765 ATTTACTCAATGTTCCACGTCAAT 57.182 33.333 0.00 0.00 0.00 2.57
414 415 1.904287 AGCTTCGGTTGCCAATACAA 58.096 45.000 0.00 0.00 0.00 2.41
442 443 6.808321 TTCTGGTATTAGTAGCTTGACCAT 57.192 37.500 0.00 0.00 36.42 3.55
443 444 6.808321 ATTCTGGTATTAGTAGCTTGACCA 57.192 37.500 0.00 0.00 35.69 4.02
468 469 1.074423 AGTTGCAGCTCCATGTGCT 59.926 52.632 0.00 6.16 40.54 4.40
503 504 1.204146 TACTGATGGAAGAGTGCCCC 58.796 55.000 0.00 0.00 0.00 5.80
712 713 6.071463 GTCACACGAAATGACAATCACTTAC 58.929 40.000 11.71 0.00 44.87 2.34
713 714 5.178623 GGTCACACGAAATGACAATCACTTA 59.821 40.000 16.32 0.00 46.89 2.24
719 720 5.514274 AAAAGGTCACACGAAATGACAAT 57.486 34.783 16.32 5.62 46.89 2.71
870 871 9.664332 GCTGGAACAAGAAGTATGATATATCAT 57.336 33.333 27.06 27.06 44.32 2.45
872 873 9.664332 ATGCTGGAACAAGAAGTATGATATATC 57.336 33.333 5.73 5.73 38.70 1.63
876 877 9.851686 AATTATGCTGGAACAAGAAGTATGATA 57.148 29.630 0.00 0.00 38.70 2.15
1098 1246 4.645136 TCTCGCCAGAATCTACATACTGTT 59.355 41.667 0.00 0.00 0.00 3.16
1104 1252 2.223923 GCAGTCTCGCCAGAATCTACAT 60.224 50.000 0.00 0.00 0.00 2.29
1134 1282 1.466950 TGACGATCGACAAAATTGGGC 59.533 47.619 24.34 0.00 0.00 5.36
1146 1294 1.061131 GCATTGTTGAGGTGACGATCG 59.939 52.381 14.88 14.88 0.00 3.69
1181 1329 0.244721 GGTGAAGCAAGCAATGGACC 59.755 55.000 0.00 0.00 0.00 4.46
1341 1489 2.229792 GGATTCAACACCTCAACAGCA 58.770 47.619 0.00 0.00 0.00 4.41
1383 1531 1.082690 GTAGCTCTGAAACTGGCAGC 58.917 55.000 15.89 0.00 33.45 5.25
1398 1546 3.032017 TCTGAAGCAAGTGACTGTAGC 57.968 47.619 0.00 0.00 0.00 3.58
1401 1549 7.446625 AGAAAATATTCTGAAGCAAGTGACTGT 59.553 33.333 0.00 0.00 44.25 3.55
1410 1558 6.151648 CAGGTCCAAGAAAATATTCTGAAGCA 59.848 38.462 0.00 0.00 45.19 3.91
1449 1597 3.181474 GGATACAGAGCACCTTGTACTCC 60.181 52.174 0.00 0.00 0.00 3.85
1837 1985 2.228822 CCAAAGGTAGCACAAAAGCGAT 59.771 45.455 0.00 0.00 40.15 4.58
2047 2195 1.544724 TGGGGACTTTGTAGCATTGC 58.455 50.000 0.00 0.00 0.00 3.56
2064 2212 5.533528 TGTTGGAAATGATCTAGCATCATGG 59.466 40.000 14.51 0.00 38.62 3.66
2131 2279 0.895530 TTGAAAGATCGTCGAGGGCT 59.104 50.000 5.12 0.59 0.00 5.19
2215 2368 9.044646 ACATAGCAGAGAACTATTCATGGATAT 57.955 33.333 0.00 0.00 0.00 1.63
2305 2487 1.080354 CTACCCTGTCCCAGACCCA 59.920 63.158 0.00 0.00 32.44 4.51
2306 2488 0.252558 TTCTACCCTGTCCCAGACCC 60.253 60.000 0.00 0.00 32.44 4.46
2335 2518 8.087982 TGCTAACAGAGACACTTTCTTATTTG 57.912 34.615 0.00 0.00 33.22 2.32
2359 2544 7.487829 CCCCATACGATAAAAATGAACAAACTG 59.512 37.037 0.00 0.00 0.00 3.16
2362 2547 7.704578 TCCCCATACGATAAAAATGAACAAA 57.295 32.000 0.00 0.00 0.00 2.83
2509 2700 4.569162 CGGAGACAGCGGTTTGAATTATTA 59.431 41.667 0.00 0.00 0.00 0.98
2522 2713 2.954753 GCAACAACCGGAGACAGCG 61.955 63.158 9.46 0.00 0.00 5.18
2535 2726 5.179929 CGCATAGATCCTCATAAATGCAACA 59.820 40.000 0.00 0.00 39.68 3.33
2553 2744 2.617250 TTTTTCAGCACAGCGCATAG 57.383 45.000 11.47 0.64 46.13 2.23
2577 2768 3.213506 TGCTAGAGATGCTCTCAGAGTC 58.786 50.000 2.93 0.00 45.73 3.36
2585 2776 0.678950 GGGGTCTGCTAGAGATGCTC 59.321 60.000 0.00 0.00 31.63 4.26
2586 2777 0.264359 AGGGGTCTGCTAGAGATGCT 59.736 55.000 0.00 0.00 31.63 3.79
2587 2778 1.069978 GAAGGGGTCTGCTAGAGATGC 59.930 57.143 0.00 0.00 31.63 3.91
2588 2779 2.676748 AGAAGGGGTCTGCTAGAGATG 58.323 52.381 0.00 0.00 34.29 2.90
2589 2780 4.479158 CTTAGAAGGGGTCTGCTAGAGAT 58.521 47.826 0.00 0.00 37.12 2.75
2590 2781 3.373220 CCTTAGAAGGGGTCTGCTAGAGA 60.373 52.174 0.00 0.00 42.66 3.10
2591 2782 2.962421 CCTTAGAAGGGGTCTGCTAGAG 59.038 54.545 0.00 0.00 42.66 2.43
2592 2783 3.033659 CCTTAGAAGGGGTCTGCTAGA 57.966 52.381 0.00 0.00 42.66 2.43
2603 2794 3.708403 AACCGTAAACCCCTTAGAAGG 57.292 47.619 0.92 0.92 46.06 3.46
2604 2795 4.005650 GGAAACCGTAAACCCCTTAGAAG 58.994 47.826 0.00 0.00 0.00 2.85
2605 2796 3.244875 GGGAAACCGTAAACCCCTTAGAA 60.245 47.826 0.00 0.00 43.64 2.10
2606 2797 2.305635 GGGAAACCGTAAACCCCTTAGA 59.694 50.000 0.00 0.00 43.64 2.10
2607 2798 2.715046 GGGAAACCGTAAACCCCTTAG 58.285 52.381 0.00 0.00 43.64 2.18
2608 2799 2.877097 GGGAAACCGTAAACCCCTTA 57.123 50.000 0.00 0.00 43.64 2.69
2609 2800 3.751767 GGGAAACCGTAAACCCCTT 57.248 52.632 0.00 0.00 43.64 3.95
2626 2817 3.821033 CCAAATTCGCCCCTTATAAGAGG 59.179 47.826 14.28 11.40 36.52 3.69
2627 2818 3.253432 GCCAAATTCGCCCCTTATAAGAG 59.747 47.826 14.28 0.00 0.00 2.85
2628 2819 3.117663 AGCCAAATTCGCCCCTTATAAGA 60.118 43.478 14.28 0.00 0.00 2.10
2629 2820 3.004734 CAGCCAAATTCGCCCCTTATAAG 59.995 47.826 5.43 5.43 0.00 1.73
2630 2821 2.955660 CAGCCAAATTCGCCCCTTATAA 59.044 45.455 0.00 0.00 0.00 0.98
2631 2822 2.582052 CAGCCAAATTCGCCCCTTATA 58.418 47.619 0.00 0.00 0.00 0.98
2632 2823 1.402787 CAGCCAAATTCGCCCCTTAT 58.597 50.000 0.00 0.00 0.00 1.73
2633 2824 1.319614 GCAGCCAAATTCGCCCCTTA 61.320 55.000 0.00 0.00 0.00 2.69
2634 2825 2.649129 GCAGCCAAATTCGCCCCTT 61.649 57.895 0.00 0.00 0.00 3.95
2635 2826 3.070576 GCAGCCAAATTCGCCCCT 61.071 61.111 0.00 0.00 0.00 4.79
2636 2827 4.496927 CGCAGCCAAATTCGCCCC 62.497 66.667 0.00 0.00 0.00 5.80
2637 2828 4.496927 CCGCAGCCAAATTCGCCC 62.497 66.667 0.00 0.00 0.00 6.13
2638 2829 2.322999 CTACCGCAGCCAAATTCGCC 62.323 60.000 0.00 0.00 0.00 5.54
2639 2830 1.062525 CTACCGCAGCCAAATTCGC 59.937 57.895 0.00 0.00 0.00 4.70
2640 2831 1.083489 TTCTACCGCAGCCAAATTCG 58.917 50.000 0.00 0.00 0.00 3.34
2641 2832 1.810151 TGTTCTACCGCAGCCAAATTC 59.190 47.619 0.00 0.00 0.00 2.17
2642 2833 1.812571 CTGTTCTACCGCAGCCAAATT 59.187 47.619 0.00 0.00 0.00 1.82
2643 2834 1.003118 TCTGTTCTACCGCAGCCAAAT 59.997 47.619 0.00 0.00 33.09 2.32
2644 2835 0.394938 TCTGTTCTACCGCAGCCAAA 59.605 50.000 0.00 0.00 33.09 3.28
2645 2836 0.394938 TTCTGTTCTACCGCAGCCAA 59.605 50.000 0.00 0.00 33.09 4.52
2646 2837 0.394938 TTTCTGTTCTACCGCAGCCA 59.605 50.000 0.00 0.00 33.09 4.75
2647 2838 0.796927 GTTTCTGTTCTACCGCAGCC 59.203 55.000 0.00 0.00 33.09 4.85
2648 2839 1.461127 CAGTTTCTGTTCTACCGCAGC 59.539 52.381 0.00 0.00 33.09 5.25
2649 2840 1.461127 GCAGTTTCTGTTCTACCGCAG 59.539 52.381 0.00 0.00 33.43 5.18
2650 2841 1.202592 TGCAGTTTCTGTTCTACCGCA 60.203 47.619 0.00 0.00 33.43 5.69
2651 2842 1.508632 TGCAGTTTCTGTTCTACCGC 58.491 50.000 0.00 0.00 33.43 5.68
2652 2843 7.534085 TTAATATGCAGTTTCTGTTCTACCG 57.466 36.000 0.00 0.00 33.43 4.02
2653 2844 8.947115 AGTTTAATATGCAGTTTCTGTTCTACC 58.053 33.333 0.00 0.00 33.43 3.18
2656 2847 9.683069 CAAAGTTTAATATGCAGTTTCTGTTCT 57.317 29.630 0.00 0.00 33.43 3.01
2657 2848 9.677567 TCAAAGTTTAATATGCAGTTTCTGTTC 57.322 29.630 0.00 0.00 33.43 3.18
2673 2864 9.765795 TGTGAAACCTTTCTTTTCAAAGTTTAA 57.234 25.926 0.00 0.00 42.98 1.52
2674 2865 9.936759 ATGTGAAACCTTTCTTTTCAAAGTTTA 57.063 25.926 0.00 0.00 42.98 2.01
2675 2866 8.720562 CATGTGAAACCTTTCTTTTCAAAGTTT 58.279 29.630 0.00 0.00 42.98 2.66
2676 2867 8.093927 TCATGTGAAACCTTTCTTTTCAAAGTT 58.906 29.630 0.00 0.00 42.98 2.66
2677 2868 7.610865 TCATGTGAAACCTTTCTTTTCAAAGT 58.389 30.769 0.00 0.00 42.98 2.66
2678 2869 7.975616 TCTCATGTGAAACCTTTCTTTTCAAAG 59.024 33.333 0.00 0.00 42.98 2.77
2679 2870 7.835822 TCTCATGTGAAACCTTTCTTTTCAAA 58.164 30.769 0.00 0.00 42.98 2.69
2680 2871 7.339212 TCTCTCATGTGAAACCTTTCTTTTCAA 59.661 33.333 0.00 0.00 42.98 2.69
2681 2872 6.828273 TCTCTCATGTGAAACCTTTCTTTTCA 59.172 34.615 0.00 0.00 39.99 2.69
2682 2873 7.264373 TCTCTCATGTGAAACCTTTCTTTTC 57.736 36.000 0.00 0.00 38.02 2.29
2683 2874 7.503566 TCATCTCTCATGTGAAACCTTTCTTTT 59.496 33.333 0.00 0.00 38.02 2.27
2684 2875 7.000472 TCATCTCTCATGTGAAACCTTTCTTT 59.000 34.615 0.00 0.00 38.02 2.52
2685 2876 6.537355 TCATCTCTCATGTGAAACCTTTCTT 58.463 36.000 0.00 0.00 38.02 2.52
2686 2877 6.119240 TCATCTCTCATGTGAAACCTTTCT 57.881 37.500 0.00 0.00 38.02 2.52
2687 2878 6.205464 TGTTCATCTCTCATGTGAAACCTTTC 59.795 38.462 0.00 0.00 34.04 2.62
2688 2879 6.064060 TGTTCATCTCTCATGTGAAACCTTT 58.936 36.000 0.00 0.00 34.04 3.11
2689 2880 5.624159 TGTTCATCTCTCATGTGAAACCTT 58.376 37.500 0.00 0.00 34.04 3.50
2690 2881 5.233083 TGTTCATCTCTCATGTGAAACCT 57.767 39.130 0.00 0.00 34.04 3.50
2691 2882 5.702670 TCTTGTTCATCTCTCATGTGAAACC 59.297 40.000 0.00 0.00 34.04 3.27
2692 2883 6.791887 TCTTGTTCATCTCTCATGTGAAAC 57.208 37.500 0.00 1.71 34.04 2.78
2693 2884 7.282901 TGTTTCTTGTTCATCTCTCATGTGAAA 59.717 33.333 0.00 0.00 34.04 2.69
2694 2885 6.767423 TGTTTCTTGTTCATCTCTCATGTGAA 59.233 34.615 0.00 0.00 0.00 3.18
2695 2886 6.290605 TGTTTCTTGTTCATCTCTCATGTGA 58.709 36.000 0.00 0.00 0.00 3.58
2696 2887 6.204301 ACTGTTTCTTGTTCATCTCTCATGTG 59.796 38.462 0.00 0.00 0.00 3.21
2697 2888 6.294473 ACTGTTTCTTGTTCATCTCTCATGT 58.706 36.000 0.00 0.00 0.00 3.21
2698 2889 6.798315 ACTGTTTCTTGTTCATCTCTCATG 57.202 37.500 0.00 0.00 0.00 3.07
2699 2890 7.675062 ACTACTGTTTCTTGTTCATCTCTCAT 58.325 34.615 0.00 0.00 0.00 2.90
2700 2891 7.055667 ACTACTGTTTCTTGTTCATCTCTCA 57.944 36.000 0.00 0.00 0.00 3.27
2701 2892 8.516234 TCTACTACTGTTTCTTGTTCATCTCTC 58.484 37.037 0.00 0.00 0.00 3.20
2702 2893 8.410673 TCTACTACTGTTTCTTGTTCATCTCT 57.589 34.615 0.00 0.00 0.00 3.10
2710 2901 9.915629 CAACTTCTATCTACTACTGTTTCTTGT 57.084 33.333 0.00 0.00 0.00 3.16
2728 2919 9.159254 ACCCTATGTATCAATGATCAACTTCTA 57.841 33.333 0.00 0.00 0.00 2.10
2729 2920 8.038862 ACCCTATGTATCAATGATCAACTTCT 57.961 34.615 0.00 0.00 0.00 2.85
2730 2921 9.429359 CTACCCTATGTATCAATGATCAACTTC 57.571 37.037 0.00 0.00 0.00 3.01
2731 2922 9.159254 TCTACCCTATGTATCAATGATCAACTT 57.841 33.333 0.00 0.00 0.00 2.66
2732 2923 8.727100 TCTACCCTATGTATCAATGATCAACT 57.273 34.615 0.00 0.00 0.00 3.16
2733 2924 9.950496 AATCTACCCTATGTATCAATGATCAAC 57.050 33.333 0.00 0.00 0.00 3.18
2735 2926 8.470002 CGAATCTACCCTATGTATCAATGATCA 58.530 37.037 0.00 0.00 0.00 2.92
2736 2927 8.470805 ACGAATCTACCCTATGTATCAATGATC 58.529 37.037 0.00 0.00 0.00 2.92
2737 2928 8.367660 ACGAATCTACCCTATGTATCAATGAT 57.632 34.615 0.00 0.00 0.00 2.45
2738 2929 7.361799 CGACGAATCTACCCTATGTATCAATGA 60.362 40.741 0.00 0.00 0.00 2.57
2739 2930 6.747739 CGACGAATCTACCCTATGTATCAATG 59.252 42.308 0.00 0.00 0.00 2.82
2740 2931 6.657966 TCGACGAATCTACCCTATGTATCAAT 59.342 38.462 0.00 0.00 0.00 2.57
2741 2932 5.999600 TCGACGAATCTACCCTATGTATCAA 59.000 40.000 0.00 0.00 0.00 2.57
2742 2933 5.554070 TCGACGAATCTACCCTATGTATCA 58.446 41.667 0.00 0.00 0.00 2.15
2743 2934 6.492007 TTCGACGAATCTACCCTATGTATC 57.508 41.667 6.10 0.00 0.00 2.24
2744 2935 5.106237 GCTTCGACGAATCTACCCTATGTAT 60.106 44.000 11.30 0.00 0.00 2.29
2745 2936 4.214971 GCTTCGACGAATCTACCCTATGTA 59.785 45.833 11.30 0.00 0.00 2.29
2746 2937 3.004524 GCTTCGACGAATCTACCCTATGT 59.995 47.826 11.30 0.00 0.00 2.29
2747 2938 3.004419 TGCTTCGACGAATCTACCCTATG 59.996 47.826 11.30 0.00 0.00 2.23
2748 2939 3.220110 TGCTTCGACGAATCTACCCTAT 58.780 45.455 11.30 0.00 0.00 2.57
2749 2940 2.646930 TGCTTCGACGAATCTACCCTA 58.353 47.619 11.30 0.00 0.00 3.53
2750 2941 1.471119 TGCTTCGACGAATCTACCCT 58.529 50.000 11.30 0.00 0.00 4.34
2751 2942 2.395654 GATGCTTCGACGAATCTACCC 58.604 52.381 11.30 0.00 0.00 3.69
2763 2954 0.103208 AAGGCTAGTCCGATGCTTCG 59.897 55.000 14.61 14.61 45.08 3.79
2764 2955 3.124560 GTTAAGGCTAGTCCGATGCTTC 58.875 50.000 0.00 0.00 40.77 3.86
2765 2956 2.766828 AGTTAAGGCTAGTCCGATGCTT 59.233 45.455 0.00 0.00 40.77 3.91
2766 2957 2.101582 CAGTTAAGGCTAGTCCGATGCT 59.898 50.000 0.00 0.00 40.77 3.79
2767 2958 2.474816 CAGTTAAGGCTAGTCCGATGC 58.525 52.381 0.00 0.00 40.77 3.91
2768 2959 2.474816 GCAGTTAAGGCTAGTCCGATG 58.525 52.381 0.00 0.00 40.77 3.84
2769 2960 1.413077 GGCAGTTAAGGCTAGTCCGAT 59.587 52.381 0.00 0.00 40.77 4.18
2770 2961 0.822164 GGCAGTTAAGGCTAGTCCGA 59.178 55.000 0.00 0.00 40.77 4.55
2771 2962 0.179081 GGGCAGTTAAGGCTAGTCCG 60.179 60.000 0.00 0.00 40.77 4.79
2772 2963 0.909623 TGGGCAGTTAAGGCTAGTCC 59.090 55.000 0.00 0.00 0.00 3.85
2773 2964 2.781681 TTGGGCAGTTAAGGCTAGTC 57.218 50.000 0.00 0.00 0.00 2.59
2774 2965 3.518992 TTTTGGGCAGTTAAGGCTAGT 57.481 42.857 0.00 0.00 0.00 2.57
2775 2966 3.131046 CCATTTTGGGCAGTTAAGGCTAG 59.869 47.826 0.00 0.00 32.67 3.42
2776 2967 3.096092 CCATTTTGGGCAGTTAAGGCTA 58.904 45.455 0.00 0.00 32.67 3.93
2777 2968 1.901833 CCATTTTGGGCAGTTAAGGCT 59.098 47.619 0.00 0.00 32.67 4.58
2778 2969 2.385013 CCATTTTGGGCAGTTAAGGC 57.615 50.000 0.00 0.00 32.67 4.35
2789 2980 0.395586 TCCGATGAGCCCCATTTTGG 60.396 55.000 0.00 0.00 35.17 3.28
2790 2981 1.027357 CTCCGATGAGCCCCATTTTG 58.973 55.000 0.00 0.00 35.17 2.44
2791 2982 3.502164 CTCCGATGAGCCCCATTTT 57.498 52.632 0.00 0.00 35.17 1.82
2822 3013 4.557605 GATTGCCACCATGCCGCG 62.558 66.667 0.00 0.00 0.00 6.46
2823 3014 3.451004 TGATTGCCACCATGCCGC 61.451 61.111 0.00 0.00 0.00 6.53
2824 3015 1.996786 GAGTGATTGCCACCATGCCG 61.997 60.000 0.00 0.00 46.87 5.69
2825 3016 1.669999 GGAGTGATTGCCACCATGCC 61.670 60.000 0.00 0.00 46.87 4.40
2826 3017 0.682209 AGGAGTGATTGCCACCATGC 60.682 55.000 0.00 0.00 46.87 4.06
2827 3018 1.386533 GAGGAGTGATTGCCACCATG 58.613 55.000 0.00 0.00 46.87 3.66
2828 3019 0.257039 GGAGGAGTGATTGCCACCAT 59.743 55.000 0.00 0.00 46.87 3.55
2829 3020 0.842030 AGGAGGAGTGATTGCCACCA 60.842 55.000 0.00 0.00 46.87 4.17
2830 3021 0.107459 GAGGAGGAGTGATTGCCACC 60.107 60.000 0.00 0.00 46.87 4.61
2831 3022 0.460987 CGAGGAGGAGTGATTGCCAC 60.461 60.000 0.00 0.00 46.03 5.01
2832 3023 0.904865 ACGAGGAGGAGTGATTGCCA 60.905 55.000 0.00 0.00 0.00 4.92
2833 3024 0.179097 GACGAGGAGGAGTGATTGCC 60.179 60.000 0.00 0.00 0.00 4.52
2834 3025 0.526524 CGACGAGGAGGAGTGATTGC 60.527 60.000 0.00 0.00 0.00 3.56
2835 3026 0.101399 CCGACGAGGAGGAGTGATTG 59.899 60.000 0.00 0.00 45.00 2.67
2836 3027 0.034380 TCCGACGAGGAGGAGTGATT 60.034 55.000 0.00 0.00 45.98 2.57
2837 3028 1.608154 TCCGACGAGGAGGAGTGAT 59.392 57.895 0.00 0.00 45.98 3.06
2838 3029 3.075186 TCCGACGAGGAGGAGTGA 58.925 61.111 0.00 0.00 45.98 3.41
2847 3038 2.751913 CGACCTCACCTCCGACGAG 61.752 68.421 0.00 0.00 35.72 4.18
2848 3039 2.532465 ATCGACCTCACCTCCGACGA 62.532 60.000 0.00 0.00 33.69 4.20
2849 3040 2.113433 ATCGACCTCACCTCCGACG 61.113 63.158 0.00 0.00 33.69 5.12
2850 3041 1.030488 TCATCGACCTCACCTCCGAC 61.030 60.000 0.00 0.00 33.69 4.79
2851 3042 0.323087 TTCATCGACCTCACCTCCGA 60.323 55.000 0.00 0.00 35.43 4.55
2852 3043 0.179134 GTTCATCGACCTCACCTCCG 60.179 60.000 0.00 0.00 0.00 4.63
2853 3044 0.895530 TGTTCATCGACCTCACCTCC 59.104 55.000 0.00 0.00 0.00 4.30
2854 3045 2.544685 CATGTTCATCGACCTCACCTC 58.455 52.381 0.00 0.00 0.00 3.85
2855 3046 1.208052 CCATGTTCATCGACCTCACCT 59.792 52.381 0.00 0.00 0.00 4.00
2856 3047 1.207089 TCCATGTTCATCGACCTCACC 59.793 52.381 0.00 0.00 0.00 4.02
2857 3048 2.093973 ACTCCATGTTCATCGACCTCAC 60.094 50.000 0.00 0.00 0.00 3.51
2858 3049 2.166459 GACTCCATGTTCATCGACCTCA 59.834 50.000 0.00 0.00 0.00 3.86
2859 3050 2.428890 AGACTCCATGTTCATCGACCTC 59.571 50.000 0.00 0.00 0.00 3.85
2860 3051 2.461695 AGACTCCATGTTCATCGACCT 58.538 47.619 0.00 0.00 0.00 3.85
2861 3052 2.932614 CAAGACTCCATGTTCATCGACC 59.067 50.000 0.00 0.00 0.00 4.79
2862 3053 3.369147 CACAAGACTCCATGTTCATCGAC 59.631 47.826 0.00 0.00 0.00 4.20
2863 3054 3.588955 CACAAGACTCCATGTTCATCGA 58.411 45.455 0.00 0.00 0.00 3.59
2864 3055 2.094894 GCACAAGACTCCATGTTCATCG 59.905 50.000 0.00 0.00 0.00 3.84
2865 3056 2.094894 CGCACAAGACTCCATGTTCATC 59.905 50.000 0.00 0.00 0.00 2.92
2866 3057 2.079158 CGCACAAGACTCCATGTTCAT 58.921 47.619 0.00 0.00 0.00 2.57
2867 3058 1.202639 ACGCACAAGACTCCATGTTCA 60.203 47.619 0.00 0.00 0.00 3.18
2868 3059 1.461127 GACGCACAAGACTCCATGTTC 59.539 52.381 0.00 0.00 0.00 3.18
2869 3060 1.512926 GACGCACAAGACTCCATGTT 58.487 50.000 0.00 0.00 0.00 2.71
2870 3061 0.667487 CGACGCACAAGACTCCATGT 60.667 55.000 0.00 0.00 0.00 3.21
2871 3062 1.354337 CCGACGCACAAGACTCCATG 61.354 60.000 0.00 0.00 0.00 3.66
2872 3063 1.079819 CCGACGCACAAGACTCCAT 60.080 57.895 0.00 0.00 0.00 3.41
2873 3064 2.338620 CCGACGCACAAGACTCCA 59.661 61.111 0.00 0.00 0.00 3.86
2874 3065 3.112709 GCCGACGCACAAGACTCC 61.113 66.667 0.00 0.00 34.03 3.85
2875 3066 1.618640 GAAGCCGACGCACAAGACTC 61.619 60.000 0.00 0.00 37.52 3.36
2876 3067 1.664965 GAAGCCGACGCACAAGACT 60.665 57.895 0.00 0.00 37.52 3.24
2877 3068 1.291877 ATGAAGCCGACGCACAAGAC 61.292 55.000 0.00 0.00 37.52 3.01
2878 3069 1.005037 ATGAAGCCGACGCACAAGA 60.005 52.632 0.00 0.00 37.52 3.02
2879 3070 1.133253 CATGAAGCCGACGCACAAG 59.867 57.895 0.00 0.00 37.52 3.16
2880 3071 2.324330 CCATGAAGCCGACGCACAA 61.324 57.895 0.00 0.00 37.52 3.33
2881 3072 2.741985 CCATGAAGCCGACGCACA 60.742 61.111 0.00 0.00 37.52 4.57
2882 3073 2.742372 ACCATGAAGCCGACGCAC 60.742 61.111 0.00 0.00 37.52 5.34
2883 3074 2.741985 CACCATGAAGCCGACGCA 60.742 61.111 0.00 0.00 37.52 5.24
2884 3075 4.166011 GCACCATGAAGCCGACGC 62.166 66.667 0.00 0.00 0.00 5.19
2885 3076 3.499737 GGCACCATGAAGCCGACG 61.500 66.667 11.78 0.00 41.70 5.12
2890 3081 4.120331 GGCGTGGCACCATGAAGC 62.120 66.667 12.86 8.23 35.09 3.86
2891 3082 2.360350 AGGCGTGGCACCATGAAG 60.360 61.111 12.86 0.00 35.09 3.02
2892 3083 2.359850 GAGGCGTGGCACCATGAA 60.360 61.111 12.86 0.00 35.09 2.57
2893 3084 4.758251 CGAGGCGTGGCACCATGA 62.758 66.667 12.86 0.00 35.09 3.07
2900 3091 4.821589 CTCCTTCCGAGGCGTGGC 62.822 72.222 0.00 0.00 43.21 5.01
2901 3092 4.821589 GCTCCTTCCGAGGCGTGG 62.822 72.222 0.00 0.00 43.21 4.94
2905 3096 4.459089 AAGCGCTCCTTCCGAGGC 62.459 66.667 12.06 0.00 43.21 4.70
2906 3097 2.202810 GAAGCGCTCCTTCCGAGG 60.203 66.667 12.06 0.00 43.39 4.63
2935 3126 2.742372 AAGTGATGTGTCGCCGCC 60.742 61.111 0.00 0.00 35.43 6.13
2936 3127 2.476051 CAAGTGATGTGTCGCCGC 59.524 61.111 0.00 0.00 35.43 6.53
2937 3128 1.840630 TTGCAAGTGATGTGTCGCCG 61.841 55.000 0.00 0.00 35.43 6.46
2938 3129 0.523072 ATTGCAAGTGATGTGTCGCC 59.477 50.000 4.94 0.00 35.43 5.54
2939 3130 1.466167 AGATTGCAAGTGATGTGTCGC 59.534 47.619 4.94 0.00 35.06 5.19
2940 3131 3.818961 AAGATTGCAAGTGATGTGTCG 57.181 42.857 4.94 0.00 0.00 4.35
2941 3132 4.863491 ACAAAGATTGCAAGTGATGTGTC 58.137 39.130 4.94 0.00 0.00 3.67
2942 3133 4.338964 TGACAAAGATTGCAAGTGATGTGT 59.661 37.500 4.94 4.20 0.00 3.72
2943 3134 4.862350 TGACAAAGATTGCAAGTGATGTG 58.138 39.130 4.94 0.84 0.00 3.21
2944 3135 5.717078 ATGACAAAGATTGCAAGTGATGT 57.283 34.783 4.94 7.82 0.00 3.06
2945 3136 5.924254 ACAATGACAAAGATTGCAAGTGATG 59.076 36.000 4.94 4.48 34.67 3.07
2946 3137 6.092955 ACAATGACAAAGATTGCAAGTGAT 57.907 33.333 4.94 0.00 34.67 3.06
2947 3138 5.067544 TGACAATGACAAAGATTGCAAGTGA 59.932 36.000 4.94 0.00 34.67 3.41
2948 3139 5.174398 GTGACAATGACAAAGATTGCAAGTG 59.826 40.000 4.94 3.04 34.67 3.16
2949 3140 5.284079 GTGACAATGACAAAGATTGCAAGT 58.716 37.500 4.94 0.00 34.67 3.16
2950 3141 4.682860 GGTGACAATGACAAAGATTGCAAG 59.317 41.667 4.94 0.00 34.67 4.01
2951 3142 4.099113 TGGTGACAATGACAAAGATTGCAA 59.901 37.500 0.00 0.00 37.44 4.08
2952 3143 3.635836 TGGTGACAATGACAAAGATTGCA 59.364 39.130 0.00 0.00 37.44 4.08
2953 3144 4.241590 TGGTGACAATGACAAAGATTGC 57.758 40.909 0.00 0.00 37.44 3.56
2964 3155 4.887029 GCGCAAGGTGATGGTGACAATG 62.887 54.545 0.30 0.00 41.36 2.82
2965 3156 2.817680 GCGCAAGGTGATGGTGACAAT 61.818 52.381 0.30 0.00 41.36 2.71
2966 3157 1.514678 GCGCAAGGTGATGGTGACAA 61.515 55.000 0.30 0.00 41.36 3.18
2967 3158 1.965930 GCGCAAGGTGATGGTGACA 60.966 57.895 0.30 0.00 42.19 3.58
2968 3159 2.870372 GCGCAAGGTGATGGTGAC 59.130 61.111 0.30 0.00 38.28 3.67
2978 3169 2.825836 GGGATGTGGAGCGCAAGG 60.826 66.667 11.47 0.00 38.28 3.61
2979 3170 2.046023 TGGGATGTGGAGCGCAAG 60.046 61.111 11.47 0.00 43.44 4.01
2980 3171 2.359850 GTGGGATGTGGAGCGCAA 60.360 61.111 11.47 0.00 31.48 4.85
2981 3172 4.758251 CGTGGGATGTGGAGCGCA 62.758 66.667 11.47 0.00 0.00 6.09
2984 3175 4.408821 TGGCGTGGGATGTGGAGC 62.409 66.667 0.00 0.00 0.00 4.70
2985 3176 2.436646 GTGGCGTGGGATGTGGAG 60.437 66.667 0.00 0.00 0.00 3.86
2986 3177 2.601702 ATGTGGCGTGGGATGTGGA 61.602 57.895 0.00 0.00 0.00 4.02
2987 3178 2.045045 ATGTGGCGTGGGATGTGG 60.045 61.111 0.00 0.00 0.00 4.17
2988 3179 1.371337 CTCATGTGGCGTGGGATGTG 61.371 60.000 0.00 0.00 0.00 3.21
2989 3180 1.078214 CTCATGTGGCGTGGGATGT 60.078 57.895 0.00 0.00 0.00 3.06
2990 3181 1.820906 CCTCATGTGGCGTGGGATG 60.821 63.158 0.00 0.00 0.00 3.51
2991 3182 2.591753 CCTCATGTGGCGTGGGAT 59.408 61.111 0.00 0.00 0.00 3.85
2992 3183 4.408821 GCCTCATGTGGCGTGGGA 62.409 66.667 22.08 0.00 43.74 4.37
2999 3190 4.631773 CCACTCTGCCTCATGTGG 57.368 61.111 9.54 9.54 42.98 4.17
3000 3191 0.322648 TCACCACTCTGCCTCATGTG 59.677 55.000 0.00 0.00 0.00 3.21
3001 3192 0.322975 GTCACCACTCTGCCTCATGT 59.677 55.000 0.00 0.00 0.00 3.21
3002 3193 0.738762 CGTCACCACTCTGCCTCATG 60.739 60.000 0.00 0.00 0.00 3.07
3003 3194 1.593787 CGTCACCACTCTGCCTCAT 59.406 57.895 0.00 0.00 0.00 2.90
3004 3195 2.574018 CCGTCACCACTCTGCCTCA 61.574 63.158 0.00 0.00 0.00 3.86
3005 3196 1.608717 ATCCGTCACCACTCTGCCTC 61.609 60.000 0.00 0.00 0.00 4.70
3006 3197 1.194781 AATCCGTCACCACTCTGCCT 61.195 55.000 0.00 0.00 0.00 4.75
3007 3198 0.321653 AAATCCGTCACCACTCTGCC 60.322 55.000 0.00 0.00 0.00 4.85
3008 3199 0.798776 CAAATCCGTCACCACTCTGC 59.201 55.000 0.00 0.00 0.00 4.26
3009 3200 2.069273 GACAAATCCGTCACCACTCTG 58.931 52.381 0.00 0.00 35.88 3.35
3010 3201 1.336887 CGACAAATCCGTCACCACTCT 60.337 52.381 0.00 0.00 35.54 3.24
3011 3202 1.068474 CGACAAATCCGTCACCACTC 58.932 55.000 0.00 0.00 35.54 3.51
3012 3203 0.949105 GCGACAAATCCGTCACCACT 60.949 55.000 0.00 0.00 35.54 4.00
3013 3204 1.495951 GCGACAAATCCGTCACCAC 59.504 57.895 0.00 0.00 35.54 4.16
3014 3205 1.669760 GGCGACAAATCCGTCACCA 60.670 57.895 0.00 0.00 37.91 4.17
3015 3206 1.669760 TGGCGACAAATCCGTCACC 60.670 57.895 0.00 0.00 36.67 4.02
3016 3207 3.960237 TGGCGACAAATCCGTCAC 58.040 55.556 0.00 0.00 36.67 3.67
3030 3221 1.887707 CCCTATCCGCGACTTTGGC 60.888 63.158 8.23 0.00 0.00 4.52
3031 3222 1.227556 CCCCTATCCGCGACTTTGG 60.228 63.158 8.23 1.80 0.00 3.28
3032 3223 0.810031 CACCCCTATCCGCGACTTTG 60.810 60.000 8.23 0.00 0.00 2.77
3033 3224 1.520666 CACCCCTATCCGCGACTTT 59.479 57.895 8.23 0.00 0.00 2.66
3034 3225 2.432300 CCACCCCTATCCGCGACTT 61.432 63.158 8.23 0.00 0.00 3.01
3035 3226 2.838225 CCACCCCTATCCGCGACT 60.838 66.667 8.23 0.00 0.00 4.18
3036 3227 4.603946 GCCACCCCTATCCGCGAC 62.604 72.222 8.23 0.00 0.00 5.19
3040 3231 3.925090 GACGGCCACCCCTATCCG 61.925 72.222 2.24 0.00 46.61 4.18
3041 3232 3.925090 CGACGGCCACCCCTATCC 61.925 72.222 2.24 0.00 0.00 2.59
3042 3233 3.925090 CCGACGGCCACCCCTATC 61.925 72.222 2.24 0.00 0.00 2.08
3052 3243 4.223964 GCATTTCTCGCCGACGGC 62.224 66.667 29.10 29.10 46.75 5.68
3053 3244 3.913573 CGCATTTCTCGCCGACGG 61.914 66.667 10.29 10.29 40.63 4.79
3054 3245 2.849966 CTCGCATTTCTCGCCGACG 61.850 63.158 0.00 0.00 42.01 5.12
3055 3246 1.805945 ACTCGCATTTCTCGCCGAC 60.806 57.895 0.00 0.00 0.00 4.79
3056 3247 1.805539 CACTCGCATTTCTCGCCGA 60.806 57.895 0.00 0.00 0.00 5.54
3057 3248 2.697425 CACTCGCATTTCTCGCCG 59.303 61.111 0.00 0.00 0.00 6.46
3058 3249 2.390599 TGCACTCGCATTTCTCGCC 61.391 57.895 0.00 0.00 45.36 5.54
3059 3250 3.168271 TGCACTCGCATTTCTCGC 58.832 55.556 0.00 0.00 45.36 5.03
3068 3259 0.322975 ATCCATCCCTATGCACTCGC 59.677 55.000 0.00 0.00 39.24 5.03
3069 3260 2.420642 CAATCCATCCCTATGCACTCG 58.579 52.381 0.00 0.00 0.00 4.18
3070 3261 2.157738 GCAATCCATCCCTATGCACTC 58.842 52.381 0.00 0.00 37.00 3.51
3071 3262 1.544093 CGCAATCCATCCCTATGCACT 60.544 52.381 0.00 0.00 36.84 4.40
3072 3263 0.877071 CGCAATCCATCCCTATGCAC 59.123 55.000 0.00 0.00 36.84 4.57
3073 3264 0.250858 CCGCAATCCATCCCTATGCA 60.251 55.000 0.00 0.00 36.84 3.96
3074 3265 1.589716 GCCGCAATCCATCCCTATGC 61.590 60.000 0.00 0.00 0.00 3.14
3075 3266 0.962356 GGCCGCAATCCATCCCTATG 60.962 60.000 0.00 0.00 0.00 2.23
3076 3267 1.380302 GGCCGCAATCCATCCCTAT 59.620 57.895 0.00 0.00 0.00 2.57
3077 3268 2.836154 GGCCGCAATCCATCCCTA 59.164 61.111 0.00 0.00 0.00 3.53
3078 3269 4.569180 CGGCCGCAATCCATCCCT 62.569 66.667 14.67 0.00 0.00 4.20
3079 3270 4.875713 ACGGCCGCAATCCATCCC 62.876 66.667 28.58 0.00 0.00 3.85
3080 3271 3.585990 CACGGCCGCAATCCATCC 61.586 66.667 28.58 0.00 0.00 3.51
3081 3272 2.933878 TACCACGGCCGCAATCCATC 62.934 60.000 28.58 0.00 0.00 3.51
3082 3273 2.544590 TTACCACGGCCGCAATCCAT 62.545 55.000 28.58 0.00 0.00 3.41
3083 3274 2.749706 TTTACCACGGCCGCAATCCA 62.750 55.000 28.58 2.10 0.00 3.41
3084 3275 1.587933 TTTTACCACGGCCGCAATCC 61.588 55.000 28.58 0.00 0.00 3.01
3085 3276 0.179174 CTTTTACCACGGCCGCAATC 60.179 55.000 28.58 0.00 0.00 2.67
3086 3277 1.591504 CCTTTTACCACGGCCGCAAT 61.592 55.000 28.58 13.43 0.00 3.56
3087 3278 2.262303 CCTTTTACCACGGCCGCAA 61.262 57.895 28.58 11.73 0.00 4.85
3088 3279 2.670251 CCTTTTACCACGGCCGCA 60.670 61.111 28.58 4.92 0.00 5.69
3089 3280 3.436924 CCCTTTTACCACGGCCGC 61.437 66.667 28.58 0.00 0.00 6.53
3090 3281 2.748647 CCCCTTTTACCACGGCCG 60.749 66.667 26.86 26.86 0.00 6.13
3091 3282 3.066190 GCCCCTTTTACCACGGCC 61.066 66.667 0.00 0.00 33.30 6.13
3092 3283 2.035155 AGCCCCTTTTACCACGGC 59.965 61.111 0.00 0.00 40.03 5.68
3093 3284 2.340328 GCAGCCCCTTTTACCACGG 61.340 63.158 0.00 0.00 0.00 4.94
3094 3285 2.340328 GGCAGCCCCTTTTACCACG 61.340 63.158 0.00 0.00 0.00 4.94
3095 3286 1.228737 TGGCAGCCCCTTTTACCAC 60.229 57.895 9.64 0.00 0.00 4.16
3096 3287 1.228737 GTGGCAGCCCCTTTTACCA 60.229 57.895 9.64 0.00 0.00 3.25
3097 3288 1.982395 GGTGGCAGCCCCTTTTACC 60.982 63.158 9.64 4.59 0.00 2.85
3098 3289 1.076727 AGGTGGCAGCCCCTTTTAC 59.923 57.895 13.95 0.00 0.00 2.01
3099 3290 1.076549 CAGGTGGCAGCCCCTTTTA 59.923 57.895 16.75 0.00 0.00 1.52
3100 3291 1.725169 TACAGGTGGCAGCCCCTTTT 61.725 55.000 16.75 10.57 0.00 2.27
3101 3292 1.509548 ATACAGGTGGCAGCCCCTTT 61.510 55.000 16.75 13.82 0.00 3.11
3102 3293 0.623324 TATACAGGTGGCAGCCCCTT 60.623 55.000 16.75 11.66 0.00 3.95
3103 3294 1.004230 TATACAGGTGGCAGCCCCT 59.996 57.895 13.95 12.41 0.00 4.79
3104 3295 1.148498 GTATACAGGTGGCAGCCCC 59.852 63.158 13.95 10.04 0.00 5.80
3105 3296 1.148498 GGTATACAGGTGGCAGCCC 59.852 63.158 13.95 2.11 0.00 5.19
3106 3297 1.227556 CGGTATACAGGTGGCAGCC 60.228 63.158 13.95 3.66 0.00 4.85
3107 3298 1.887707 GCGGTATACAGGTGGCAGC 60.888 63.158 9.02 9.02 0.00 5.25
3108 3299 1.227556 GGCGGTATACAGGTGGCAG 60.228 63.158 5.01 0.00 0.00 4.85
3109 3300 2.737881 GGGCGGTATACAGGTGGCA 61.738 63.158 5.01 0.00 0.00 4.92
3110 3301 2.110420 GGGCGGTATACAGGTGGC 59.890 66.667 5.01 3.71 0.00 5.01
3111 3302 2.420043 CGGGCGGTATACAGGTGG 59.580 66.667 5.01 0.00 0.00 4.61
3112 3303 2.279918 GCGGGCGGTATACAGGTG 60.280 66.667 5.01 0.00 0.00 4.00
3113 3304 3.908081 CGCGGGCGGTATACAGGT 61.908 66.667 4.92 0.00 35.56 4.00
3127 3318 0.449388 GGTATATCTACCGTCCCGCG 59.551 60.000 0.00 0.00 38.23 6.46
3135 3326 3.354467 CCCTCTGGACGGTATATCTACC 58.646 54.545 0.00 0.00 43.55 3.18
3136 3327 3.354467 CCCCTCTGGACGGTATATCTAC 58.646 54.545 0.00 0.00 35.39 2.59
3137 3328 2.291411 GCCCCTCTGGACGGTATATCTA 60.291 54.545 0.00 0.00 35.39 1.98
3138 3329 1.550409 GCCCCTCTGGACGGTATATCT 60.550 57.143 0.00 0.00 35.39 1.98
3139 3330 0.896226 GCCCCTCTGGACGGTATATC 59.104 60.000 0.00 0.00 35.39 1.63
3140 3331 0.898789 CGCCCCTCTGGACGGTATAT 60.899 60.000 0.00 0.00 35.39 0.86
3141 3332 1.529948 CGCCCCTCTGGACGGTATA 60.530 63.158 0.00 0.00 35.39 1.47
3142 3333 2.658321 ATCGCCCCTCTGGACGGTAT 62.658 60.000 0.00 0.00 35.30 2.73
3143 3334 2.866523 AATCGCCCCTCTGGACGGTA 62.867 60.000 0.00 0.00 35.30 4.02
3144 3335 4.779733 ATCGCCCCTCTGGACGGT 62.780 66.667 0.00 0.00 35.30 4.83
3145 3336 2.536997 AAAATCGCCCCTCTGGACGG 62.537 60.000 0.00 0.00 35.30 4.79
3146 3337 1.078426 AAAATCGCCCCTCTGGACG 60.078 57.895 0.00 0.00 35.39 4.79
3147 3338 0.322546 ACAAAATCGCCCCTCTGGAC 60.323 55.000 0.00 0.00 35.39 4.02
3148 3339 0.322456 CACAAAATCGCCCCTCTGGA 60.322 55.000 0.00 0.00 35.39 3.86
3149 3340 1.315257 CCACAAAATCGCCCCTCTGG 61.315 60.000 0.00 0.00 37.09 3.86
3150 3341 1.315257 CCCACAAAATCGCCCCTCTG 61.315 60.000 0.00 0.00 0.00 3.35
3151 3342 1.000896 CCCACAAAATCGCCCCTCT 60.001 57.895 0.00 0.00 0.00 3.69
3152 3343 2.710902 GCCCACAAAATCGCCCCTC 61.711 63.158 0.00 0.00 0.00 4.30
3153 3344 2.679996 GCCCACAAAATCGCCCCT 60.680 61.111 0.00 0.00 0.00 4.79
3154 3345 3.770040 GGCCCACAAAATCGCCCC 61.770 66.667 0.00 0.00 35.23 5.80
3155 3346 2.994417 TGGCCCACAAAATCGCCC 60.994 61.111 0.00 0.00 40.87 6.13
3156 3347 2.261361 GTGGCCCACAAAATCGCC 59.739 61.111 9.55 0.00 41.99 5.54
3157 3348 1.080569 CAGTGGCCCACAAAATCGC 60.081 57.895 17.80 0.00 36.74 4.58
3158 3349 1.529226 TACAGTGGCCCACAAAATCG 58.471 50.000 17.80 0.00 36.74 3.34
3159 3350 3.554129 GGTTTACAGTGGCCCACAAAATC 60.554 47.826 17.80 9.91 36.74 2.17
3160 3351 2.367241 GGTTTACAGTGGCCCACAAAAT 59.633 45.455 17.80 0.37 36.74 1.82
3161 3352 1.757699 GGTTTACAGTGGCCCACAAAA 59.242 47.619 17.80 10.49 36.74 2.44
3162 3353 1.404843 GGTTTACAGTGGCCCACAAA 58.595 50.000 17.80 5.15 36.74 2.83
3163 3354 0.820074 CGGTTTACAGTGGCCCACAA 60.820 55.000 17.80 0.00 36.74 3.33
3164 3355 1.228003 CGGTTTACAGTGGCCCACA 60.228 57.895 17.80 0.00 36.74 4.17
3165 3356 0.820482 AACGGTTTACAGTGGCCCAC 60.820 55.000 5.50 5.50 34.10 4.61
3166 3357 0.106619 AAACGGTTTACAGTGGCCCA 60.107 50.000 3.90 0.00 0.00 5.36
3167 3358 1.536766 GTAAACGGTTTACAGTGGCCC 59.463 52.381 29.44 8.00 43.79 5.80
3168 3359 2.975410 GTAAACGGTTTACAGTGGCC 57.025 50.000 29.44 0.00 43.79 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.