Multiple sequence alignment - TraesCS6A01G161300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G161300 chr6A 100.000 3340 0 0 1 3340 156209760 156206421 0.000000e+00 6168
1 TraesCS6A01G161300 chr6A 93.893 131 6 1 2 132 228059945 228060073 2.630000e-46 196
2 TraesCS6A01G161300 chr6B 92.720 1717 86 19 873 2580 222587473 222589159 0.000000e+00 2442
3 TraesCS6A01G161300 chr6B 85.366 615 51 11 2728 3340 222590050 222590627 4.770000e-168 601
4 TraesCS6A01G161300 chr6D 96.251 1467 47 4 903 2369 124897313 124898771 0.000000e+00 2398
5 TraesCS6A01G161300 chr6D 94.796 442 22 1 2720 3160 124899122 124899563 0.000000e+00 688
6 TraesCS6A01G161300 chr6D 89.450 218 10 7 2361 2576 124898918 124899124 2.560000e-66 263
7 TraesCS6A01G161300 chr6D 89.785 186 10 3 3155 3340 124904617 124904793 2.590000e-56 230
8 TraesCS6A01G161300 chr3D 95.221 272 13 0 135 406 395169518 395169247 6.620000e-117 431
9 TraesCS6A01G161300 chr3D 91.584 202 10 3 558 752 395168812 395168611 4.250000e-69 272
10 TraesCS6A01G161300 chr2A 95.420 131 4 1 2 132 731186770 731186898 1.210000e-49 207
11 TraesCS6A01G161300 chr5A 94.737 133 5 1 1 133 25606657 25606527 4.370000e-49 206
12 TraesCS6A01G161300 chr5A 94.697 132 5 1 1 132 22201335 22201464 1.570000e-48 204
13 TraesCS6A01G161300 chr5D 93.939 132 6 1 1 132 362431710 362431581 7.310000e-47 198
14 TraesCS6A01G161300 chr7A 92.424 132 8 1 1 132 628013990 628013861 1.580000e-43 187
15 TraesCS6A01G161300 chr3A 92.424 132 8 1 1 132 475399496 475399367 1.580000e-43 187
16 TraesCS6A01G161300 chr3A 92.366 131 7 2 1 131 9507307 9507434 2.050000e-42 183
17 TraesCS6A01G161300 chr7D 92.366 131 8 1 2 132 402305919 402305791 5.690000e-43 185
18 TraesCS6A01G161300 chr5B 84.354 147 20 3 2570 2715 647913426 647913570 1.250000e-29 141
19 TraesCS6A01G161300 chr2B 84.397 141 19 3 2577 2716 665455528 665455390 5.810000e-28 135
20 TraesCS6A01G161300 chr7B 83.099 142 23 1 2575 2716 193952888 193953028 9.730000e-26 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G161300 chr6A 156206421 156209760 3339 True 6168.000000 6168 100.0000 1 3340 1 chr6A.!!$R1 3339
1 TraesCS6A01G161300 chr6B 222587473 222590627 3154 False 1521.500000 2442 89.0430 873 3340 2 chr6B.!!$F1 2467
2 TraesCS6A01G161300 chr6D 124897313 124899563 2250 False 1116.333333 2398 93.4990 903 3160 3 chr6D.!!$F2 2257
3 TraesCS6A01G161300 chr3D 395168611 395169518 907 True 351.500000 431 93.4025 135 752 2 chr3D.!!$R1 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
118 119 0.110295 TGGCAAAAGCTAGAGTGGCA 59.89 50.0 9.97 9.97 43.41 4.92 F
754 1051 0.679505 GCACGGGGCATCATCTAGTA 59.32 55.0 0.00 0.00 43.97 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1445 1752 1.073897 GTTGGCTGGAACTGGAGCT 59.926 57.895 0.00 0.0 35.42 4.09 R
2586 3058 0.037697 CGGATCCACACTCAACCGAA 60.038 55.000 13.41 0.0 42.40 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.611225 ATTTTGCTTTTGCCACGGAA 57.389 40.000 0.00 0.00 46.87 4.30
20 21 2.611225 TTTTGCTTTTGCCACGGAAT 57.389 40.000 0.00 0.00 46.87 3.01
21 22 1.863267 TTTGCTTTTGCCACGGAATG 58.137 45.000 0.00 0.00 46.87 2.67
30 31 3.495124 CCACGGAATGGCAAAAGTG 57.505 52.632 0.00 0.00 43.24 3.16
31 32 0.958091 CCACGGAATGGCAAAAGTGA 59.042 50.000 14.36 0.00 43.24 3.41
32 33 1.545582 CCACGGAATGGCAAAAGTGAT 59.454 47.619 14.36 0.00 43.24 3.06
33 34 2.598589 CACGGAATGGCAAAAGTGATG 58.401 47.619 9.20 0.00 0.00 3.07
34 35 2.030007 CACGGAATGGCAAAAGTGATGT 60.030 45.455 9.20 0.00 0.00 3.06
35 36 3.190327 CACGGAATGGCAAAAGTGATGTA 59.810 43.478 9.20 0.00 0.00 2.29
36 37 4.016444 ACGGAATGGCAAAAGTGATGTAT 58.984 39.130 0.00 0.00 0.00 2.29
37 38 4.462483 ACGGAATGGCAAAAGTGATGTATT 59.538 37.500 0.00 0.00 0.00 1.89
38 39 4.799949 CGGAATGGCAAAAGTGATGTATTG 59.200 41.667 0.00 0.00 0.00 1.90
39 40 5.622007 CGGAATGGCAAAAGTGATGTATTGT 60.622 40.000 0.00 0.00 0.00 2.71
40 41 5.807011 GGAATGGCAAAAGTGATGTATTGTC 59.193 40.000 0.00 0.00 0.00 3.18
41 42 5.981088 ATGGCAAAAGTGATGTATTGTCA 57.019 34.783 0.00 0.00 41.11 3.58
42 43 5.781210 TGGCAAAAGTGATGTATTGTCAA 57.219 34.783 0.00 0.00 34.74 3.18
43 44 6.154203 TGGCAAAAGTGATGTATTGTCAAA 57.846 33.333 0.00 0.00 34.74 2.69
44 45 6.577103 TGGCAAAAGTGATGTATTGTCAAAA 58.423 32.000 0.00 0.00 34.74 2.44
45 46 6.700960 TGGCAAAAGTGATGTATTGTCAAAAG 59.299 34.615 0.00 0.00 34.74 2.27
46 47 6.346838 GGCAAAAGTGATGTATTGTCAAAAGC 60.347 38.462 0.00 0.00 0.00 3.51
47 48 6.421801 GCAAAAGTGATGTATTGTCAAAAGCT 59.578 34.615 0.00 0.00 0.00 3.74
48 49 7.594758 GCAAAAGTGATGTATTGTCAAAAGCTA 59.405 33.333 0.00 0.00 0.00 3.32
49 50 9.462174 CAAAAGTGATGTATTGTCAAAAGCTAA 57.538 29.630 0.00 0.00 0.00 3.09
50 51 9.683069 AAAAGTGATGTATTGTCAAAAGCTAAG 57.317 29.630 0.00 0.00 0.00 2.18
51 52 8.621532 AAGTGATGTATTGTCAAAAGCTAAGA 57.378 30.769 0.00 0.00 0.00 2.10
52 53 8.261492 AGTGATGTATTGTCAAAAGCTAAGAG 57.739 34.615 0.00 0.00 0.00 2.85
53 54 7.880195 AGTGATGTATTGTCAAAAGCTAAGAGT 59.120 33.333 0.00 0.00 0.00 3.24
54 55 7.959651 GTGATGTATTGTCAAAAGCTAAGAGTG 59.040 37.037 0.00 0.00 0.00 3.51
55 56 7.877612 TGATGTATTGTCAAAAGCTAAGAGTGA 59.122 33.333 0.00 0.00 0.00 3.41
56 57 7.421530 TGTATTGTCAAAAGCTAAGAGTGAC 57.578 36.000 0.00 0.00 39.22 3.67
57 58 6.989759 TGTATTGTCAAAAGCTAAGAGTGACA 59.010 34.615 11.57 11.57 45.03 3.58
60 61 6.119144 TGTCAAAAGCTAAGAGTGACAAAC 57.881 37.500 12.67 0.00 44.06 2.93
61 62 5.198274 GTCAAAAGCTAAGAGTGACAAACG 58.802 41.667 9.16 0.00 38.74 3.60
62 63 4.873827 TCAAAAGCTAAGAGTGACAAACGT 59.126 37.500 0.00 0.00 0.00 3.99
63 64 4.795970 AAAGCTAAGAGTGACAAACGTG 57.204 40.909 0.00 0.00 0.00 4.49
64 65 2.755650 AGCTAAGAGTGACAAACGTGG 58.244 47.619 0.00 0.00 0.00 4.94
65 66 1.798813 GCTAAGAGTGACAAACGTGGG 59.201 52.381 0.00 0.00 0.00 4.61
66 67 2.547218 GCTAAGAGTGACAAACGTGGGA 60.547 50.000 0.00 0.00 0.00 4.37
67 68 2.702592 AAGAGTGACAAACGTGGGAA 57.297 45.000 0.00 0.00 0.00 3.97
68 69 2.240493 AGAGTGACAAACGTGGGAAG 57.760 50.000 0.00 0.00 0.00 3.46
69 70 1.485066 AGAGTGACAAACGTGGGAAGT 59.515 47.619 0.00 0.00 0.00 3.01
70 71 1.865340 GAGTGACAAACGTGGGAAGTC 59.135 52.381 0.00 0.00 0.00 3.01
71 72 1.208535 AGTGACAAACGTGGGAAGTCA 59.791 47.619 0.00 0.00 36.92 3.41
72 73 2.011222 GTGACAAACGTGGGAAGTCAA 58.989 47.619 9.39 0.00 40.47 3.18
73 74 2.420722 GTGACAAACGTGGGAAGTCAAA 59.579 45.455 9.39 0.00 40.47 2.69
74 75 3.066203 GTGACAAACGTGGGAAGTCAAAT 59.934 43.478 9.39 0.00 40.47 2.32
75 76 3.697045 TGACAAACGTGGGAAGTCAAATT 59.303 39.130 0.00 0.00 36.39 1.82
76 77 4.201970 TGACAAACGTGGGAAGTCAAATTC 60.202 41.667 0.00 0.00 36.39 2.17
77 78 3.951680 ACAAACGTGGGAAGTCAAATTCT 59.048 39.130 0.00 0.00 0.00 2.40
78 79 5.127491 ACAAACGTGGGAAGTCAAATTCTA 58.873 37.500 0.00 0.00 0.00 2.10
79 80 5.238650 ACAAACGTGGGAAGTCAAATTCTAG 59.761 40.000 0.00 0.00 0.00 2.43
80 81 4.884668 ACGTGGGAAGTCAAATTCTAGA 57.115 40.909 0.00 0.00 0.00 2.43
81 82 5.223449 ACGTGGGAAGTCAAATTCTAGAA 57.777 39.130 7.82 7.82 0.00 2.10
82 83 5.805728 ACGTGGGAAGTCAAATTCTAGAAT 58.194 37.500 12.37 12.37 0.00 2.40
83 84 5.643777 ACGTGGGAAGTCAAATTCTAGAATG 59.356 40.000 18.61 9.10 0.00 2.67
84 85 5.065218 CGTGGGAAGTCAAATTCTAGAATGG 59.935 44.000 18.61 13.65 0.00 3.16
85 86 4.949856 TGGGAAGTCAAATTCTAGAATGGC 59.050 41.667 18.61 10.42 0.00 4.40
86 87 4.949856 GGGAAGTCAAATTCTAGAATGGCA 59.050 41.667 18.61 2.86 0.00 4.92
87 88 5.595952 GGGAAGTCAAATTCTAGAATGGCAT 59.404 40.000 18.61 3.46 0.00 4.40
88 89 6.772716 GGGAAGTCAAATTCTAGAATGGCATA 59.227 38.462 18.61 1.07 0.00 3.14
89 90 7.285401 GGGAAGTCAAATTCTAGAATGGCATAA 59.715 37.037 18.61 0.00 0.00 1.90
90 91 8.348507 GGAAGTCAAATTCTAGAATGGCATAAG 58.651 37.037 18.61 0.00 0.00 1.73
91 92 9.113838 GAAGTCAAATTCTAGAATGGCATAAGA 57.886 33.333 18.61 1.51 0.00 2.10
92 93 9.466497 AAGTCAAATTCTAGAATGGCATAAGAA 57.534 29.630 18.61 17.11 0.00 2.52
93 94 9.466497 AGTCAAATTCTAGAATGGCATAAGAAA 57.534 29.630 18.61 4.88 30.56 2.52
116 117 4.525912 AAATTGGCAAAAGCTAGAGTGG 57.474 40.909 3.01 0.00 0.00 4.00
117 118 1.247567 TTGGCAAAAGCTAGAGTGGC 58.752 50.000 0.00 0.00 37.09 5.01
118 119 0.110295 TGGCAAAAGCTAGAGTGGCA 59.890 50.000 9.97 9.97 43.41 4.92
119 120 1.247567 GGCAAAAGCTAGAGTGGCAA 58.752 50.000 0.00 0.00 36.61 4.52
120 121 1.613437 GGCAAAAGCTAGAGTGGCAAA 59.387 47.619 0.00 0.00 36.61 3.68
121 122 2.035832 GGCAAAAGCTAGAGTGGCAAAA 59.964 45.455 0.00 0.00 36.61 2.44
122 123 3.492482 GGCAAAAGCTAGAGTGGCAAAAA 60.492 43.478 0.00 0.00 36.61 1.94
123 124 3.490896 GCAAAAGCTAGAGTGGCAAAAAC 59.509 43.478 0.00 0.00 0.00 2.43
124 125 4.681744 CAAAAGCTAGAGTGGCAAAAACA 58.318 39.130 0.00 0.00 0.00 2.83
125 126 5.108517 CAAAAGCTAGAGTGGCAAAAACAA 58.891 37.500 0.00 0.00 0.00 2.83
126 127 5.337578 AAAGCTAGAGTGGCAAAAACAAA 57.662 34.783 0.00 0.00 0.00 2.83
127 128 4.574599 AGCTAGAGTGGCAAAAACAAAG 57.425 40.909 0.00 0.00 0.00 2.77
128 129 3.954258 AGCTAGAGTGGCAAAAACAAAGT 59.046 39.130 0.00 0.00 0.00 2.66
129 130 4.402474 AGCTAGAGTGGCAAAAACAAAGTT 59.598 37.500 0.00 0.00 0.00 2.66
130 131 5.105351 AGCTAGAGTGGCAAAAACAAAGTTT 60.105 36.000 0.00 0.00 0.00 2.66
131 132 5.580691 GCTAGAGTGGCAAAAACAAAGTTTT 59.419 36.000 0.00 2.26 0.00 2.43
132 133 6.092122 GCTAGAGTGGCAAAAACAAAGTTTTT 59.908 34.615 13.18 13.18 32.38 1.94
182 183 0.751643 AGCAACGGGAGCAAAGTGTT 60.752 50.000 0.00 0.00 0.00 3.32
185 186 0.738389 AACGGGAGCAAAGTGTTGTG 59.262 50.000 0.00 0.00 37.06 3.33
189 190 1.008538 GAGCAAAGTGTTGTGGCCG 60.009 57.895 0.00 0.00 37.06 6.13
236 237 3.821033 ACAGTAGCACCAAGAAATTGGAC 59.179 43.478 13.74 5.54 44.82 4.02
241 242 3.896888 AGCACCAAGAAATTGGACAATGA 59.103 39.130 13.74 0.00 44.82 2.57
271 272 1.272212 GGCAACACACCAAGGGTAATG 59.728 52.381 0.00 0.00 32.11 1.90
275 276 1.176527 CACACCAAGGGTAATGCCAG 58.823 55.000 0.00 0.00 39.65 4.85
342 343 2.777960 ATGGGCCACACACCAAGGT 61.778 57.895 9.28 0.00 40.73 3.50
372 373 8.602472 ACCAACATTATAGAAGTTCTCTCTCT 57.398 34.615 9.12 0.00 35.41 3.10
373 374 8.691797 ACCAACATTATAGAAGTTCTCTCTCTC 58.308 37.037 9.12 0.00 35.41 3.20
374 375 8.912988 CCAACATTATAGAAGTTCTCTCTCTCT 58.087 37.037 9.12 0.00 35.41 3.10
375 376 9.950680 CAACATTATAGAAGTTCTCTCTCTCTC 57.049 37.037 9.12 0.00 35.41 3.20
376 377 9.920946 AACATTATAGAAGTTCTCTCTCTCTCT 57.079 33.333 9.12 0.00 35.41 3.10
406 407 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
416 417 4.047166 TCTCTCTCTCTCCCTCTCTCATT 58.953 47.826 0.00 0.00 0.00 2.57
417 418 4.478317 TCTCTCTCTCTCCCTCTCTCATTT 59.522 45.833 0.00 0.00 0.00 2.32
418 419 5.044179 TCTCTCTCTCTCCCTCTCTCATTTT 60.044 44.000 0.00 0.00 0.00 1.82
419 420 5.200483 TCTCTCTCTCCCTCTCTCATTTTC 58.800 45.833 0.00 0.00 0.00 2.29
420 421 5.044179 TCTCTCTCTCCCTCTCTCATTTTCT 60.044 44.000 0.00 0.00 0.00 2.52
421 422 6.159575 TCTCTCTCTCCCTCTCTCATTTTCTA 59.840 42.308 0.00 0.00 0.00 2.10
422 423 6.736581 TCTCTCTCCCTCTCTCATTTTCTAA 58.263 40.000 0.00 0.00 0.00 2.10
423 424 7.185565 TCTCTCTCCCTCTCTCATTTTCTAAA 58.814 38.462 0.00 0.00 0.00 1.85
424 425 7.843760 TCTCTCTCCCTCTCTCATTTTCTAAAT 59.156 37.037 0.00 0.00 0.00 1.40
425 426 9.142014 CTCTCTCCCTCTCTCATTTTCTAAATA 57.858 37.037 0.00 0.00 0.00 1.40
426 427 8.919145 TCTCTCCCTCTCTCATTTTCTAAATAC 58.081 37.037 0.00 0.00 0.00 1.89
427 428 8.846423 TCTCCCTCTCTCATTTTCTAAATACT 57.154 34.615 0.00 0.00 0.00 2.12
428 429 9.273137 TCTCCCTCTCTCATTTTCTAAATACTT 57.727 33.333 0.00 0.00 0.00 2.24
429 430 9.898152 CTCCCTCTCTCATTTTCTAAATACTTT 57.102 33.333 0.00 0.00 0.00 2.66
450 451 8.519799 ACTTTTATTTGTTGTTCCTCTCTTGA 57.480 30.769 0.00 0.00 0.00 3.02
451 452 8.966868 ACTTTTATTTGTTGTTCCTCTCTTGAA 58.033 29.630 0.00 0.00 0.00 2.69
452 453 9.971922 CTTTTATTTGTTGTTCCTCTCTTGAAT 57.028 29.630 0.00 0.00 0.00 2.57
460 461 9.177608 TGTTGTTCCTCTCTTGAATTAATATGG 57.822 33.333 0.00 0.00 0.00 2.74
461 462 9.178758 GTTGTTCCTCTCTTGAATTAATATGGT 57.821 33.333 0.00 0.00 0.00 3.55
462 463 8.737168 TGTTCCTCTCTTGAATTAATATGGTG 57.263 34.615 0.00 0.00 0.00 4.17
463 464 7.775093 TGTTCCTCTCTTGAATTAATATGGTGG 59.225 37.037 0.00 0.00 0.00 4.61
464 465 6.299141 TCCTCTCTTGAATTAATATGGTGGC 58.701 40.000 0.00 0.00 0.00 5.01
465 466 6.101734 TCCTCTCTTGAATTAATATGGTGGCT 59.898 38.462 0.00 0.00 0.00 4.75
466 467 7.292356 TCCTCTCTTGAATTAATATGGTGGCTA 59.708 37.037 0.00 0.00 0.00 3.93
467 468 7.939039 CCTCTCTTGAATTAATATGGTGGCTAA 59.061 37.037 0.00 0.00 0.00 3.09
468 469 9.342308 CTCTCTTGAATTAATATGGTGGCTAAA 57.658 33.333 0.00 0.00 0.00 1.85
469 470 9.866655 TCTCTTGAATTAATATGGTGGCTAAAT 57.133 29.630 0.00 0.00 0.00 1.40
471 472 9.866655 TCTTGAATTAATATGGTGGCTAAATCT 57.133 29.630 0.00 0.00 0.00 2.40
477 478 9.740710 ATTAATATGGTGGCTAAATCTTAGACC 57.259 33.333 0.00 0.00 0.00 3.85
478 479 6.763715 ATATGGTGGCTAAATCTTAGACCA 57.236 37.500 8.58 8.58 36.48 4.02
479 480 4.216411 TGGTGGCTAAATCTTAGACCAC 57.784 45.455 20.28 20.28 45.41 4.16
480 481 3.844211 TGGTGGCTAAATCTTAGACCACT 59.156 43.478 23.75 0.00 45.44 4.00
481 482 4.081087 TGGTGGCTAAATCTTAGACCACTC 60.081 45.833 23.75 18.47 45.44 3.51
482 483 4.081087 GGTGGCTAAATCTTAGACCACTCA 60.081 45.833 23.75 0.00 45.44 3.41
483 484 5.488341 GTGGCTAAATCTTAGACCACTCAA 58.512 41.667 20.72 0.00 43.34 3.02
484 485 5.938125 GTGGCTAAATCTTAGACCACTCAAA 59.062 40.000 20.72 0.00 43.34 2.69
485 486 5.938125 TGGCTAAATCTTAGACCACTCAAAC 59.062 40.000 0.00 0.00 0.00 2.93
486 487 6.174049 GGCTAAATCTTAGACCACTCAAACT 58.826 40.000 0.00 0.00 0.00 2.66
487 488 7.038587 TGGCTAAATCTTAGACCACTCAAACTA 60.039 37.037 0.00 0.00 0.00 2.24
488 489 7.822822 GGCTAAATCTTAGACCACTCAAACTAA 59.177 37.037 0.00 0.00 0.00 2.24
489 490 9.216117 GCTAAATCTTAGACCACTCAAACTAAA 57.784 33.333 0.00 0.00 0.00 1.85
492 493 9.574516 AAATCTTAGACCACTCAAACTAAATGT 57.425 29.630 0.00 0.00 0.00 2.71
493 494 7.962964 TCTTAGACCACTCAAACTAAATGTG 57.037 36.000 0.00 0.00 0.00 3.21
494 495 7.506114 TCTTAGACCACTCAAACTAAATGTGT 58.494 34.615 0.00 0.00 0.00 3.72
495 496 8.644216 TCTTAGACCACTCAAACTAAATGTGTA 58.356 33.333 0.00 0.00 0.00 2.90
496 497 9.436957 CTTAGACCACTCAAACTAAATGTGTAT 57.563 33.333 0.00 0.00 0.00 2.29
497 498 9.787435 TTAGACCACTCAAACTAAATGTGTATT 57.213 29.630 0.00 0.00 0.00 1.89
498 499 8.691661 AGACCACTCAAACTAAATGTGTATTT 57.308 30.769 0.00 0.00 39.69 1.40
499 500 9.131791 AGACCACTCAAACTAAATGTGTATTTT 57.868 29.630 0.00 0.00 37.64 1.82
500 501 9.744468 GACCACTCAAACTAAATGTGTATTTTT 57.256 29.630 0.00 0.00 37.64 1.94
501 502 9.528018 ACCACTCAAACTAAATGTGTATTTTTG 57.472 29.630 0.00 0.00 37.64 2.44
502 503 9.743057 CCACTCAAACTAAATGTGTATTTTTGA 57.257 29.630 0.00 0.00 37.64 2.69
510 511 9.185680 ACTAAATGTGTATTTTTGAGATACCCC 57.814 33.333 0.00 0.00 37.64 4.95
511 512 6.693315 AATGTGTATTTTTGAGATACCCCG 57.307 37.500 0.00 0.00 0.00 5.73
512 513 3.942748 TGTGTATTTTTGAGATACCCCGC 59.057 43.478 0.00 0.00 0.00 6.13
513 514 4.196971 GTGTATTTTTGAGATACCCCGCT 58.803 43.478 0.00 0.00 0.00 5.52
514 515 4.035208 GTGTATTTTTGAGATACCCCGCTG 59.965 45.833 0.00 0.00 0.00 5.18
515 516 3.644966 ATTTTTGAGATACCCCGCTGA 57.355 42.857 0.00 0.00 0.00 4.26
516 517 3.426787 TTTTTGAGATACCCCGCTGAA 57.573 42.857 0.00 0.00 0.00 3.02
517 518 2.396590 TTTGAGATACCCCGCTGAAC 57.603 50.000 0.00 0.00 0.00 3.18
518 519 1.568504 TTGAGATACCCCGCTGAACT 58.431 50.000 0.00 0.00 0.00 3.01
519 520 1.568504 TGAGATACCCCGCTGAACTT 58.431 50.000 0.00 0.00 0.00 2.66
520 521 2.742348 TGAGATACCCCGCTGAACTTA 58.258 47.619 0.00 0.00 0.00 2.24
521 522 3.101437 TGAGATACCCCGCTGAACTTAA 58.899 45.455 0.00 0.00 0.00 1.85
522 523 3.516300 TGAGATACCCCGCTGAACTTAAA 59.484 43.478 0.00 0.00 0.00 1.52
523 524 3.869832 GAGATACCCCGCTGAACTTAAAC 59.130 47.826 0.00 0.00 0.00 2.01
524 525 3.262405 AGATACCCCGCTGAACTTAAACA 59.738 43.478 0.00 0.00 0.00 2.83
525 526 2.579410 ACCCCGCTGAACTTAAACAT 57.421 45.000 0.00 0.00 0.00 2.71
526 527 2.433436 ACCCCGCTGAACTTAAACATC 58.567 47.619 0.00 0.00 0.00 3.06
527 528 2.039879 ACCCCGCTGAACTTAAACATCT 59.960 45.455 0.00 0.00 0.00 2.90
528 529 2.678336 CCCCGCTGAACTTAAACATCTC 59.322 50.000 0.00 0.00 0.00 2.75
529 530 3.334691 CCCGCTGAACTTAAACATCTCA 58.665 45.455 0.00 0.00 0.00 3.27
530 531 3.751175 CCCGCTGAACTTAAACATCTCAA 59.249 43.478 0.00 0.00 0.00 3.02
531 532 4.215399 CCCGCTGAACTTAAACATCTCAAA 59.785 41.667 0.00 0.00 0.00 2.69
532 533 5.106157 CCCGCTGAACTTAAACATCTCAAAT 60.106 40.000 0.00 0.00 0.00 2.32
533 534 6.381801 CCGCTGAACTTAAACATCTCAAATT 58.618 36.000 0.00 0.00 0.00 1.82
534 535 6.306356 CCGCTGAACTTAAACATCTCAAATTG 59.694 38.462 0.00 0.00 0.00 2.32
535 536 7.077605 CGCTGAACTTAAACATCTCAAATTGA 58.922 34.615 0.00 0.00 0.00 2.57
536 537 7.752239 CGCTGAACTTAAACATCTCAAATTGAT 59.248 33.333 0.00 0.00 0.00 2.57
713 1004 9.745018 TTTCTCACTCCATAAATCATTCTTCTT 57.255 29.630 0.00 0.00 0.00 2.52
718 1009 6.540189 ACTCCATAAATCATTCTTCTTCACGG 59.460 38.462 0.00 0.00 0.00 4.94
733 1024 1.003112 ACGGCGCTACAAATTCCCA 60.003 52.632 6.90 0.00 0.00 4.37
734 1025 1.024579 ACGGCGCTACAAATTCCCAG 61.025 55.000 6.90 0.00 0.00 4.45
737 1034 1.312371 GCGCTACAAATTCCCAGGCA 61.312 55.000 0.00 0.00 0.00 4.75
752 1049 4.368391 GCACGGGGCATCATCTAG 57.632 61.111 0.00 0.00 43.97 2.43
753 1050 1.447643 GCACGGGGCATCATCTAGT 59.552 57.895 0.00 0.00 43.97 2.57
754 1051 0.679505 GCACGGGGCATCATCTAGTA 59.320 55.000 0.00 0.00 43.97 1.82
755 1052 1.276421 GCACGGGGCATCATCTAGTAT 59.724 52.381 0.00 0.00 43.97 2.12
756 1053 2.496070 GCACGGGGCATCATCTAGTATA 59.504 50.000 0.00 0.00 43.97 1.47
757 1054 3.056107 GCACGGGGCATCATCTAGTATAA 60.056 47.826 0.00 0.00 43.97 0.98
758 1055 4.748892 CACGGGGCATCATCTAGTATAAG 58.251 47.826 0.00 0.00 0.00 1.73
759 1056 3.769844 ACGGGGCATCATCTAGTATAAGG 59.230 47.826 0.00 0.00 0.00 2.69
760 1057 4.023980 CGGGGCATCATCTAGTATAAGGA 58.976 47.826 0.00 0.00 0.00 3.36
761 1058 4.098654 CGGGGCATCATCTAGTATAAGGAG 59.901 50.000 0.00 0.00 0.00 3.69
762 1059 5.026790 GGGGCATCATCTAGTATAAGGAGT 58.973 45.833 0.00 0.00 0.00 3.85
763 1060 5.485708 GGGGCATCATCTAGTATAAGGAGTT 59.514 44.000 0.00 0.00 0.00 3.01
764 1061 6.668283 GGGGCATCATCTAGTATAAGGAGTTA 59.332 42.308 0.00 0.00 0.00 2.24
765 1062 7.180408 GGGGCATCATCTAGTATAAGGAGTTAA 59.820 40.741 0.00 0.00 0.00 2.01
766 1063 8.763601 GGGCATCATCTAGTATAAGGAGTTAAT 58.236 37.037 0.00 0.00 0.00 1.40
767 1064 9.593134 GGCATCATCTAGTATAAGGAGTTAATG 57.407 37.037 0.00 0.00 0.00 1.90
800 1097 8.956446 AAAACAAATCATATATAAGGAGGGGG 57.044 34.615 0.00 0.00 0.00 5.40
801 1098 7.905144 AACAAATCATATATAAGGAGGGGGA 57.095 36.000 0.00 0.00 0.00 4.81
802 1099 7.905144 ACAAATCATATATAAGGAGGGGGAA 57.095 36.000 0.00 0.00 0.00 3.97
803 1100 8.300752 ACAAATCATATATAAGGAGGGGGAAA 57.699 34.615 0.00 0.00 0.00 3.13
804 1101 8.742437 ACAAATCATATATAAGGAGGGGGAAAA 58.258 33.333 0.00 0.00 0.00 2.29
805 1102 9.247861 CAAATCATATATAAGGAGGGGGAAAAG 57.752 37.037 0.00 0.00 0.00 2.27
806 1103 8.772647 AATCATATATAAGGAGGGGGAAAAGA 57.227 34.615 0.00 0.00 0.00 2.52
807 1104 7.569599 TCATATATAAGGAGGGGGAAAAGAC 57.430 40.000 0.00 0.00 0.00 3.01
808 1105 7.086260 TCATATATAAGGAGGGGGAAAAGACA 58.914 38.462 0.00 0.00 0.00 3.41
809 1106 7.574750 TCATATATAAGGAGGGGGAAAAGACAA 59.425 37.037 0.00 0.00 0.00 3.18
810 1107 6.865651 ATATAAGGAGGGGGAAAAGACAAT 57.134 37.500 0.00 0.00 0.00 2.71
811 1108 7.964730 ATATAAGGAGGGGGAAAAGACAATA 57.035 36.000 0.00 0.00 0.00 1.90
812 1109 6.865651 ATAAGGAGGGGGAAAAGACAATAT 57.134 37.500 0.00 0.00 0.00 1.28
813 1110 4.797912 AGGAGGGGGAAAAGACAATATC 57.202 45.455 0.00 0.00 0.00 1.63
814 1111 3.136626 AGGAGGGGGAAAAGACAATATCG 59.863 47.826 0.00 0.00 0.00 2.92
815 1112 3.118000 GGAGGGGGAAAAGACAATATCGT 60.118 47.826 0.00 0.00 0.00 3.73
816 1113 3.877508 GAGGGGGAAAAGACAATATCGTG 59.122 47.826 0.00 0.00 0.00 4.35
817 1114 2.357952 GGGGGAAAAGACAATATCGTGC 59.642 50.000 0.00 0.00 0.00 5.34
818 1115 2.357952 GGGGAAAAGACAATATCGTGCC 59.642 50.000 0.00 0.00 0.00 5.01
819 1116 3.013921 GGGAAAAGACAATATCGTGCCA 58.986 45.455 0.00 0.00 0.00 4.92
820 1117 3.065371 GGGAAAAGACAATATCGTGCCAG 59.935 47.826 0.00 0.00 0.00 4.85
821 1118 3.689649 GGAAAAGACAATATCGTGCCAGT 59.310 43.478 0.00 0.00 0.00 4.00
822 1119 4.201822 GGAAAAGACAATATCGTGCCAGTC 60.202 45.833 0.00 0.00 0.00 3.51
823 1120 3.610040 AAGACAATATCGTGCCAGTCA 57.390 42.857 0.00 0.00 0.00 3.41
824 1121 3.170791 AGACAATATCGTGCCAGTCAG 57.829 47.619 0.00 0.00 0.00 3.51
825 1122 2.159043 AGACAATATCGTGCCAGTCAGG 60.159 50.000 0.00 0.00 41.84 3.86
826 1123 1.831106 ACAATATCGTGCCAGTCAGGA 59.169 47.619 0.00 0.00 42.90 3.86
828 1125 3.118261 ACAATATCGTGCCAGTCAGGATT 60.118 43.478 5.59 0.00 45.11 3.01
829 1126 2.890808 TATCGTGCCAGTCAGGATTC 57.109 50.000 5.59 0.00 45.11 2.52
830 1127 0.904649 ATCGTGCCAGTCAGGATTCA 59.095 50.000 0.00 0.00 45.11 2.57
831 1128 0.904649 TCGTGCCAGTCAGGATTCAT 59.095 50.000 0.00 0.00 41.22 2.57
832 1129 1.012086 CGTGCCAGTCAGGATTCATG 58.988 55.000 0.00 0.00 41.22 3.07
833 1130 1.676916 CGTGCCAGTCAGGATTCATGT 60.677 52.381 0.00 0.00 41.22 3.21
834 1131 2.440409 GTGCCAGTCAGGATTCATGTT 58.560 47.619 0.00 0.00 41.22 2.71
835 1132 2.821969 GTGCCAGTCAGGATTCATGTTT 59.178 45.455 0.00 0.00 41.22 2.83
836 1133 4.009675 GTGCCAGTCAGGATTCATGTTTA 58.990 43.478 0.00 0.00 41.22 2.01
837 1134 4.095483 GTGCCAGTCAGGATTCATGTTTAG 59.905 45.833 0.00 0.00 41.22 1.85
838 1135 3.065925 GCCAGTCAGGATTCATGTTTAGC 59.934 47.826 0.00 0.00 41.22 3.09
839 1136 3.310774 CCAGTCAGGATTCATGTTTAGCG 59.689 47.826 0.00 0.00 41.22 4.26
840 1137 3.310774 CAGTCAGGATTCATGTTTAGCGG 59.689 47.826 0.00 0.00 0.00 5.52
841 1138 3.055094 AGTCAGGATTCATGTTTAGCGGT 60.055 43.478 0.00 0.00 0.00 5.68
842 1139 3.689649 GTCAGGATTCATGTTTAGCGGTT 59.310 43.478 0.00 0.00 0.00 4.44
843 1140 4.156008 GTCAGGATTCATGTTTAGCGGTTT 59.844 41.667 0.00 0.00 0.00 3.27
844 1141 4.764823 TCAGGATTCATGTTTAGCGGTTTT 59.235 37.500 0.00 0.00 0.00 2.43
845 1142 5.242838 TCAGGATTCATGTTTAGCGGTTTTT 59.757 36.000 0.00 0.00 0.00 1.94
869 1166 8.437443 TTTTTAACATGGTAATAAGTTTCGCG 57.563 30.769 3.54 0.00 0.00 5.87
870 1167 4.609691 AACATGGTAATAAGTTTCGCGG 57.390 40.909 6.13 0.00 0.00 6.46
871 1168 3.602483 ACATGGTAATAAGTTTCGCGGT 58.398 40.909 6.13 0.00 0.00 5.68
899 1196 1.663379 TACCGGTCTCTGCGTGATGG 61.663 60.000 12.40 0.00 0.00 3.51
900 1197 2.573869 CGGTCTCTGCGTGATGGT 59.426 61.111 0.00 0.00 0.00 3.55
901 1198 1.517257 CGGTCTCTGCGTGATGGTC 60.517 63.158 0.00 0.00 0.00 4.02
926 1226 1.588674 GAACACATCAACACGACCCA 58.411 50.000 0.00 0.00 0.00 4.51
993 1300 2.435410 CGGAACCCTACAACCGGC 60.435 66.667 0.00 0.00 41.41 6.13
1027 1334 3.631046 CGCCATCCCTAGCCTCCC 61.631 72.222 0.00 0.00 0.00 4.30
1076 1383 1.072159 CCTCTGATTCCATCCCGCC 59.928 63.158 0.00 0.00 0.00 6.13
1081 1388 1.146263 GATTCCATCCCGCCGAACT 59.854 57.895 0.00 0.00 0.00 3.01
1121 1428 2.666098 CCCCCATCGTTTCCTCCGT 61.666 63.158 0.00 0.00 0.00 4.69
1169 1476 2.039624 AGGCAGATCCACGGACCT 59.960 61.111 0.00 0.00 37.29 3.85
1170 1477 2.022240 GAGGCAGATCCACGGACCTC 62.022 65.000 5.07 5.07 37.17 3.85
1171 1478 2.501610 GCAGATCCACGGACCTCC 59.498 66.667 0.00 0.00 0.00 4.30
1470 1777 2.419990 CCAGTTCCAGCCAACGATGATA 60.420 50.000 0.00 0.00 0.00 2.15
2242 2549 1.376037 CTGTCCGCTCCTGGTTTCC 60.376 63.158 0.00 0.00 0.00 3.13
2287 2594 4.248859 TCTGCAGAGAAATTCAGTGTAGC 58.751 43.478 13.74 0.00 0.00 3.58
2309 2616 4.563374 GCCTTTGGTAGAATTGTGGCATTT 60.563 41.667 0.00 0.00 38.99 2.32
2310 2617 5.337169 GCCTTTGGTAGAATTGTGGCATTTA 60.337 40.000 0.00 0.00 38.99 1.40
2311 2618 6.099341 CCTTTGGTAGAATTGTGGCATTTAC 58.901 40.000 0.00 0.00 0.00 2.01
2425 2895 2.727278 TCATAGTACGTGTTTGTGCGTG 59.273 45.455 0.00 0.00 41.68 5.34
2455 2927 5.715279 AGCACATGTATATAGTCCCACGTAT 59.285 40.000 0.00 0.00 0.00 3.06
2460 2932 7.555554 ACATGTATATAGTCCCACGTATACCTC 59.444 40.741 0.00 0.00 31.81 3.85
2564 3036 0.322187 GCCGTTCCACCCAGTAATGT 60.322 55.000 0.00 0.00 0.00 2.71
2580 3052 2.414994 ATGTGTGGCTCTTCATCAGG 57.585 50.000 0.00 0.00 0.00 3.86
2581 3053 0.321919 TGTGTGGCTCTTCATCAGGC 60.322 55.000 0.00 0.00 36.96 4.85
2582 3054 1.028868 GTGTGGCTCTTCATCAGGCC 61.029 60.000 0.00 0.00 44.31 5.19
2583 3055 1.203441 TGTGGCTCTTCATCAGGCCT 61.203 55.000 0.00 0.00 44.36 5.19
2584 3056 0.034670 GTGGCTCTTCATCAGGCCTT 60.035 55.000 0.00 0.00 44.36 4.35
2585 3057 0.034767 TGGCTCTTCATCAGGCCTTG 60.035 55.000 0.00 0.00 44.36 3.61
2586 3058 0.034670 GGCTCTTCATCAGGCCTTGT 60.035 55.000 0.00 0.00 41.20 3.16
2587 3059 1.615384 GGCTCTTCATCAGGCCTTGTT 60.615 52.381 0.00 0.00 41.20 2.83
2588 3060 1.742268 GCTCTTCATCAGGCCTTGTTC 59.258 52.381 0.00 0.00 0.00 3.18
2589 3061 2.005451 CTCTTCATCAGGCCTTGTTCG 58.995 52.381 0.00 0.00 0.00 3.95
2594 3066 0.400213 ATCAGGCCTTGTTCGGTTGA 59.600 50.000 0.00 0.00 0.00 3.18
2595 3067 0.250295 TCAGGCCTTGTTCGGTTGAG 60.250 55.000 0.00 0.00 0.00 3.02
2596 3068 0.535102 CAGGCCTTGTTCGGTTGAGT 60.535 55.000 0.00 0.00 0.00 3.41
2598 3070 0.818040 GGCCTTGTTCGGTTGAGTGT 60.818 55.000 0.00 0.00 0.00 3.55
2601 3879 1.474320 CCTTGTTCGGTTGAGTGTGGA 60.474 52.381 0.00 0.00 0.00 4.02
2604 3882 1.270625 TGTTCGGTTGAGTGTGGATCC 60.271 52.381 4.20 4.20 0.00 3.36
2605 3883 0.037697 TTCGGTTGAGTGTGGATCCG 60.038 55.000 7.39 0.00 39.40 4.18
2607 3885 1.014044 CGGTTGAGTGTGGATCCGTG 61.014 60.000 7.39 0.00 34.38 4.94
2620 3898 2.275418 CCGTGGGGATTGAAGGGG 59.725 66.667 0.00 0.00 34.06 4.79
2622 3900 1.382629 CGTGGGGATTGAAGGGGTT 59.617 57.895 0.00 0.00 0.00 4.11
2624 3902 1.825641 CGTGGGGATTGAAGGGGTTTT 60.826 52.381 0.00 0.00 0.00 2.43
2629 3907 3.245839 GGGGATTGAAGGGGTTTTAAGGA 60.246 47.826 0.00 0.00 0.00 3.36
2631 3909 4.023980 GGATTGAAGGGGTTTTAAGGAGG 58.976 47.826 0.00 0.00 0.00 4.30
2633 3911 5.519808 GATTGAAGGGGTTTTAAGGAGGAT 58.480 41.667 0.00 0.00 0.00 3.24
2634 3912 5.348259 TTGAAGGGGTTTTAAGGAGGATT 57.652 39.130 0.00 0.00 0.00 3.01
2636 3914 6.471942 TGAAGGGGTTTTAAGGAGGATTTA 57.528 37.500 0.00 0.00 0.00 1.40
2639 3917 7.790314 TGAAGGGGTTTTAAGGAGGATTTAAAA 59.210 33.333 0.00 0.27 37.54 1.52
2645 3923 8.827177 GTTTTAAGGAGGATTTAAAACCCTTG 57.173 34.615 10.67 0.00 45.87 3.61
2646 3924 8.426489 GTTTTAAGGAGGATTTAAAACCCTTGT 58.574 33.333 10.67 4.37 45.87 3.16
2647 3925 9.657728 TTTTAAGGAGGATTTAAAACCCTTGTA 57.342 29.630 10.67 3.60 35.93 2.41
2649 3927 7.776618 AAGGAGGATTTAAAACCCTTGTAAG 57.223 36.000 10.67 0.00 33.23 2.34
2650 3928 6.860034 AGGAGGATTTAAAACCCTTGTAAGT 58.140 36.000 10.67 0.00 0.00 2.24
2651 3929 6.946583 AGGAGGATTTAAAACCCTTGTAAGTC 59.053 38.462 10.67 0.19 0.00 3.01
2652 3930 6.717997 GGAGGATTTAAAACCCTTGTAAGTCA 59.282 38.462 10.67 0.00 0.00 3.41
2653 3931 7.231925 GGAGGATTTAAAACCCTTGTAAGTCAA 59.768 37.037 10.67 0.00 34.61 3.18
2654 3932 8.541899 AGGATTTAAAACCCTTGTAAGTCAAA 57.458 30.769 10.67 0.00 35.48 2.69
2655 3933 8.983789 AGGATTTAAAACCCTTGTAAGTCAAAA 58.016 29.630 10.67 0.00 35.48 2.44
2656 3934 9.772973 GGATTTAAAACCCTTGTAAGTCAAAAT 57.227 29.630 3.13 0.00 35.48 1.82
2662 3940 8.706322 AAACCCTTGTAAGTCAAAATACATCT 57.294 30.769 0.00 0.00 35.48 2.90
2664 3942 9.802039 AACCCTTGTAAGTCAAAATACATCTTA 57.198 29.630 0.00 0.00 35.48 2.10
2665 3943 9.802039 ACCCTTGTAAGTCAAAATACATCTTAA 57.198 29.630 0.00 0.00 35.48 1.85
2673 3951 7.920738 AGTCAAAATACATCTTAATTCTCGCC 58.079 34.615 0.00 0.00 0.00 5.54
2674 3952 7.552687 AGTCAAAATACATCTTAATTCTCGCCA 59.447 33.333 0.00 0.00 0.00 5.69
2675 3953 8.181573 GTCAAAATACATCTTAATTCTCGCCAA 58.818 33.333 0.00 0.00 0.00 4.52
2676 3954 8.902806 TCAAAATACATCTTAATTCTCGCCAAT 58.097 29.630 0.00 0.00 0.00 3.16
2677 3955 9.173939 CAAAATACATCTTAATTCTCGCCAATC 57.826 33.333 0.00 0.00 0.00 2.67
2678 3956 7.440523 AATACATCTTAATTCTCGCCAATCC 57.559 36.000 0.00 0.00 0.00 3.01
2679 3957 4.137543 ACATCTTAATTCTCGCCAATCCC 58.862 43.478 0.00 0.00 0.00 3.85
2680 3958 3.208747 TCTTAATTCTCGCCAATCCCC 57.791 47.619 0.00 0.00 0.00 4.81
2681 3959 2.777692 TCTTAATTCTCGCCAATCCCCT 59.222 45.455 0.00 0.00 0.00 4.79
2682 3960 2.930826 TAATTCTCGCCAATCCCCTC 57.069 50.000 0.00 0.00 0.00 4.30
2683 3961 0.183731 AATTCTCGCCAATCCCCTCC 59.816 55.000 0.00 0.00 0.00 4.30
2684 3962 0.988145 ATTCTCGCCAATCCCCTCCA 60.988 55.000 0.00 0.00 0.00 3.86
2685 3963 1.204786 TTCTCGCCAATCCCCTCCAA 61.205 55.000 0.00 0.00 0.00 3.53
2686 3964 0.988145 TCTCGCCAATCCCCTCCAAT 60.988 55.000 0.00 0.00 0.00 3.16
2687 3965 0.106519 CTCGCCAATCCCCTCCAATT 60.107 55.000 0.00 0.00 0.00 2.32
2688 3966 0.106719 TCGCCAATCCCCTCCAATTC 60.107 55.000 0.00 0.00 0.00 2.17
2689 3967 0.106519 CGCCAATCCCCTCCAATTCT 60.107 55.000 0.00 0.00 0.00 2.40
2690 3968 1.697284 GCCAATCCCCTCCAATTCTC 58.303 55.000 0.00 0.00 0.00 2.87
2691 3969 1.216427 GCCAATCCCCTCCAATTCTCT 59.784 52.381 0.00 0.00 0.00 3.10
2692 3970 2.358615 GCCAATCCCCTCCAATTCTCTT 60.359 50.000 0.00 0.00 0.00 2.85
2693 3971 3.294214 CCAATCCCCTCCAATTCTCTTG 58.706 50.000 0.00 0.00 0.00 3.02
2694 3972 3.294214 CAATCCCCTCCAATTCTCTTGG 58.706 50.000 0.00 0.00 40.87 3.61
2695 3973 1.298953 TCCCCTCCAATTCTCTTGGG 58.701 55.000 4.28 0.00 39.96 4.12
2696 3974 0.259938 CCCCTCCAATTCTCTTGGGG 59.740 60.000 0.00 0.00 46.89 4.96
2697 3975 1.298953 CCCTCCAATTCTCTTGGGGA 58.701 55.000 5.43 0.00 42.70 4.81
2698 3976 1.213926 CCCTCCAATTCTCTTGGGGAG 59.786 57.143 5.43 0.00 42.70 4.30
2699 3977 2.200081 CCTCCAATTCTCTTGGGGAGA 58.800 52.381 5.43 0.00 46.38 3.71
2709 3987 3.906720 TCTTGGGGAGAGAATTAACCG 57.093 47.619 0.00 0.00 0.00 4.44
2710 3988 3.446968 TCTTGGGGAGAGAATTAACCGA 58.553 45.455 0.00 0.00 0.00 4.69
2711 3989 3.841845 TCTTGGGGAGAGAATTAACCGAA 59.158 43.478 0.00 0.00 0.00 4.30
2712 3990 3.622166 TGGGGAGAGAATTAACCGAAC 57.378 47.619 0.00 0.00 0.00 3.95
2713 3991 2.907696 TGGGGAGAGAATTAACCGAACA 59.092 45.455 0.00 0.00 0.00 3.18
2714 3992 3.328343 TGGGGAGAGAATTAACCGAACAA 59.672 43.478 0.00 0.00 0.00 2.83
2715 3993 3.939592 GGGGAGAGAATTAACCGAACAAG 59.060 47.826 0.00 0.00 0.00 3.16
2716 3994 4.565028 GGGGAGAGAATTAACCGAACAAGT 60.565 45.833 0.00 0.00 0.00 3.16
2717 3995 4.392138 GGGAGAGAATTAACCGAACAAGTG 59.608 45.833 0.00 0.00 0.00 3.16
2718 3996 4.142881 GGAGAGAATTAACCGAACAAGTGC 60.143 45.833 0.00 0.00 0.00 4.40
2719 3997 4.642429 AGAGAATTAACCGAACAAGTGCT 58.358 39.130 0.00 0.00 0.00 4.40
2720 3998 4.691216 AGAGAATTAACCGAACAAGTGCTC 59.309 41.667 0.00 0.00 0.00 4.26
2721 3999 4.385825 AGAATTAACCGAACAAGTGCTCA 58.614 39.130 0.00 0.00 0.00 4.26
2722 4000 4.452455 AGAATTAACCGAACAAGTGCTCAG 59.548 41.667 0.00 0.00 0.00 3.35
2723 4001 2.902705 TAACCGAACAAGTGCTCAGT 57.097 45.000 0.00 0.00 0.00 3.41
2777 4055 0.810016 AGGGACGAAAGCTAGACGAC 59.190 55.000 12.63 7.36 0.00 4.34
2781 4059 3.251571 GGACGAAAGCTAGACGACAATT 58.748 45.455 12.63 0.00 0.00 2.32
2782 4060 4.418392 GGACGAAAGCTAGACGACAATTA 58.582 43.478 12.63 0.00 0.00 1.40
2828 4107 0.250295 TTCCTCTGGTTGAGTTGCGG 60.250 55.000 0.00 0.00 41.11 5.69
2855 4134 3.043635 GTGCGATGATAGTTTGCACTG 57.956 47.619 8.27 0.00 46.49 3.66
3049 4328 9.003658 TCTCCTTCTGAAATTGTAGTTCATTTC 57.996 33.333 0.00 0.00 34.59 2.17
3072 4351 7.624223 TCAAACGACTTGGAGCAAATTGCAA 62.624 40.000 20.82 0.00 39.73 4.08
3133 4413 5.581126 AAAAAGATCTGCTGTGTCAAACA 57.419 34.783 0.00 0.00 37.22 2.83
3179 4459 9.130661 TCTTGTTTGTTGAGAAGGATAAAATGA 57.869 29.630 0.00 0.00 0.00 2.57
3188 4468 7.761409 TGAGAAGGATAAAATGAATCGGTTTG 58.239 34.615 0.00 0.00 0.00 2.93
3189 4469 7.393234 TGAGAAGGATAAAATGAATCGGTTTGT 59.607 33.333 0.00 0.00 0.00 2.83
3190 4470 8.122472 AGAAGGATAAAATGAATCGGTTTGTT 57.878 30.769 0.00 0.00 0.00 2.83
3191 4471 9.238368 AGAAGGATAAAATGAATCGGTTTGTTA 57.762 29.630 0.00 0.00 0.00 2.41
3192 4472 9.285770 GAAGGATAAAATGAATCGGTTTGTTAC 57.714 33.333 0.00 0.00 0.00 2.50
3193 4473 8.575649 AGGATAAAATGAATCGGTTTGTTACT 57.424 30.769 0.00 0.00 0.00 2.24
3194 4474 8.674607 AGGATAAAATGAATCGGTTTGTTACTC 58.325 33.333 0.00 0.00 0.00 2.59
3195 4475 7.913821 GGATAAAATGAATCGGTTTGTTACTCC 59.086 37.037 0.00 0.00 0.00 3.85
3196 4476 6.642707 AAAATGAATCGGTTTGTTACTCCA 57.357 33.333 0.00 0.00 0.00 3.86
3197 4477 6.834168 AAATGAATCGGTTTGTTACTCCAT 57.166 33.333 0.00 0.00 0.00 3.41
3198 4478 6.834168 AATGAATCGGTTTGTTACTCCATT 57.166 33.333 0.00 0.00 0.00 3.16
3199 4479 7.931578 AATGAATCGGTTTGTTACTCCATTA 57.068 32.000 0.00 0.00 0.00 1.90
3200 4480 8.519799 AATGAATCGGTTTGTTACTCCATTAT 57.480 30.769 0.00 0.00 0.00 1.28
3255 4535 4.642437 TCATGTCAAGCAGTGGTTTGTTAA 59.358 37.500 4.45 0.00 36.68 2.01
3260 4540 7.721402 TGTCAAGCAGTGGTTTGTTAATTTAT 58.279 30.769 4.45 0.00 36.68 1.40
3263 4543 6.664428 AGCAGTGGTTTGTTAATTTATGGT 57.336 33.333 0.00 0.00 0.00 3.55
3267 4547 8.085909 GCAGTGGTTTGTTAATTTATGGTTACT 58.914 33.333 0.00 0.00 0.00 2.24
3270 4550 8.578151 GTGGTTTGTTAATTTATGGTTACTGGA 58.422 33.333 0.00 0.00 0.00 3.86
3271 4551 9.144298 TGGTTTGTTAATTTATGGTTACTGGAA 57.856 29.630 0.00 0.00 0.00 3.53
3272 4552 9.984190 GGTTTGTTAATTTATGGTTACTGGAAA 57.016 29.630 0.00 0.00 0.00 3.13
3322 4602 7.205515 AGACCTGGATAGATCAAAACAAGAT 57.794 36.000 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.611225 TTCCGTGGCAAAAGCAAAAT 57.389 40.000 0.00 0.00 0.00 1.82
1 2 2.208431 CATTCCGTGGCAAAAGCAAAA 58.792 42.857 0.00 0.00 0.00 2.44
2 3 1.539929 CCATTCCGTGGCAAAAGCAAA 60.540 47.619 0.00 0.00 42.12 3.68
3 4 0.033228 CCATTCCGTGGCAAAAGCAA 59.967 50.000 0.00 0.00 42.12 3.91
4 5 1.664873 CCATTCCGTGGCAAAAGCA 59.335 52.632 0.00 0.00 42.12 3.91
5 6 4.576993 CCATTCCGTGGCAAAAGC 57.423 55.556 0.00 0.00 42.12 3.51
13 14 2.030007 ACATCACTTTTGCCATTCCGTG 60.030 45.455 0.00 0.00 0.00 4.94
14 15 2.238521 ACATCACTTTTGCCATTCCGT 58.761 42.857 0.00 0.00 0.00 4.69
15 16 4.637483 ATACATCACTTTTGCCATTCCG 57.363 40.909 0.00 0.00 0.00 4.30
16 17 5.723295 ACAATACATCACTTTTGCCATTCC 58.277 37.500 0.00 0.00 0.00 3.01
17 18 6.389091 TGACAATACATCACTTTTGCCATTC 58.611 36.000 0.00 0.00 0.00 2.67
18 19 6.343716 TGACAATACATCACTTTTGCCATT 57.656 33.333 0.00 0.00 0.00 3.16
19 20 5.981088 TGACAATACATCACTTTTGCCAT 57.019 34.783 0.00 0.00 0.00 4.40
20 21 5.781210 TTGACAATACATCACTTTTGCCA 57.219 34.783 0.00 0.00 0.00 4.92
21 22 6.346838 GCTTTTGACAATACATCACTTTTGCC 60.347 38.462 0.00 0.00 0.00 4.52
22 23 6.421801 AGCTTTTGACAATACATCACTTTTGC 59.578 34.615 0.00 0.00 0.00 3.68
23 24 7.935338 AGCTTTTGACAATACATCACTTTTG 57.065 32.000 0.00 0.00 0.00 2.44
24 25 9.683069 CTTAGCTTTTGACAATACATCACTTTT 57.317 29.630 0.00 0.00 0.00 2.27
25 26 9.066892 TCTTAGCTTTTGACAATACATCACTTT 57.933 29.630 0.00 0.00 0.00 2.66
26 27 8.621532 TCTTAGCTTTTGACAATACATCACTT 57.378 30.769 0.00 0.00 0.00 3.16
27 28 7.880195 ACTCTTAGCTTTTGACAATACATCACT 59.120 33.333 0.00 0.00 0.00 3.41
28 29 7.959651 CACTCTTAGCTTTTGACAATACATCAC 59.040 37.037 0.00 0.00 0.00 3.06
29 30 7.877612 TCACTCTTAGCTTTTGACAATACATCA 59.122 33.333 0.00 0.00 0.00 3.07
30 31 8.171840 GTCACTCTTAGCTTTTGACAATACATC 58.828 37.037 0.00 0.00 37.20 3.06
31 32 7.661437 TGTCACTCTTAGCTTTTGACAATACAT 59.339 33.333 11.08 0.00 42.68 2.29
32 33 6.989759 TGTCACTCTTAGCTTTTGACAATACA 59.010 34.615 11.08 0.00 42.68 2.29
33 34 7.421530 TGTCACTCTTAGCTTTTGACAATAC 57.578 36.000 11.08 0.00 42.68 1.89
35 36 6.942532 TTGTCACTCTTAGCTTTTGACAAT 57.057 33.333 17.37 0.00 46.87 2.71
37 38 5.220586 CGTTTGTCACTCTTAGCTTTTGACA 60.221 40.000 0.00 1.31 43.65 3.58
38 39 5.198274 CGTTTGTCACTCTTAGCTTTTGAC 58.802 41.667 0.00 0.00 37.65 3.18
39 40 4.873827 ACGTTTGTCACTCTTAGCTTTTGA 59.126 37.500 0.00 0.00 0.00 2.69
40 41 4.963953 CACGTTTGTCACTCTTAGCTTTTG 59.036 41.667 0.00 0.00 0.00 2.44
41 42 4.035208 CCACGTTTGTCACTCTTAGCTTTT 59.965 41.667 0.00 0.00 0.00 2.27
42 43 3.560068 CCACGTTTGTCACTCTTAGCTTT 59.440 43.478 0.00 0.00 0.00 3.51
43 44 3.131396 CCACGTTTGTCACTCTTAGCTT 58.869 45.455 0.00 0.00 0.00 3.74
44 45 2.548067 CCCACGTTTGTCACTCTTAGCT 60.548 50.000 0.00 0.00 0.00 3.32
45 46 1.798813 CCCACGTTTGTCACTCTTAGC 59.201 52.381 0.00 0.00 0.00 3.09
46 47 3.380479 TCCCACGTTTGTCACTCTTAG 57.620 47.619 0.00 0.00 0.00 2.18
47 48 3.133362 ACTTCCCACGTTTGTCACTCTTA 59.867 43.478 0.00 0.00 0.00 2.10
48 49 2.093128 ACTTCCCACGTTTGTCACTCTT 60.093 45.455 0.00 0.00 0.00 2.85
49 50 1.485066 ACTTCCCACGTTTGTCACTCT 59.515 47.619 0.00 0.00 0.00 3.24
50 51 1.865340 GACTTCCCACGTTTGTCACTC 59.135 52.381 0.00 0.00 0.00 3.51
51 52 1.208535 TGACTTCCCACGTTTGTCACT 59.791 47.619 0.00 0.00 33.45 3.41
52 53 1.658994 TGACTTCCCACGTTTGTCAC 58.341 50.000 0.00 0.00 33.45 3.67
53 54 2.404923 TTGACTTCCCACGTTTGTCA 57.595 45.000 0.00 0.00 36.10 3.58
54 55 3.982576 ATTTGACTTCCCACGTTTGTC 57.017 42.857 0.00 0.00 0.00 3.18
55 56 3.951680 AGAATTTGACTTCCCACGTTTGT 59.048 39.130 0.00 0.00 0.00 2.83
56 57 4.568152 AGAATTTGACTTCCCACGTTTG 57.432 40.909 0.00 0.00 0.00 2.93
57 58 5.617252 TCTAGAATTTGACTTCCCACGTTT 58.383 37.500 0.00 0.00 0.00 3.60
58 59 5.223449 TCTAGAATTTGACTTCCCACGTT 57.777 39.130 0.00 0.00 0.00 3.99
59 60 4.884668 TCTAGAATTTGACTTCCCACGT 57.115 40.909 0.00 0.00 0.00 4.49
60 61 5.065218 CCATTCTAGAATTTGACTTCCCACG 59.935 44.000 15.49 0.00 0.00 4.94
61 62 5.163612 GCCATTCTAGAATTTGACTTCCCAC 60.164 44.000 15.49 0.00 0.00 4.61
62 63 4.949856 GCCATTCTAGAATTTGACTTCCCA 59.050 41.667 15.49 0.00 0.00 4.37
63 64 4.949856 TGCCATTCTAGAATTTGACTTCCC 59.050 41.667 15.49 0.00 0.00 3.97
64 65 6.705863 ATGCCATTCTAGAATTTGACTTCC 57.294 37.500 15.49 0.00 0.00 3.46
65 66 9.113838 TCTTATGCCATTCTAGAATTTGACTTC 57.886 33.333 15.49 1.39 0.00 3.01
66 67 9.466497 TTCTTATGCCATTCTAGAATTTGACTT 57.534 29.630 15.49 6.39 0.00 3.01
67 68 9.466497 TTTCTTATGCCATTCTAGAATTTGACT 57.534 29.630 15.49 2.96 0.00 3.41
102 103 4.681744 TGTTTTTGCCACTCTAGCTTTTG 58.318 39.130 0.00 0.00 0.00 2.44
103 104 5.337578 TTGTTTTTGCCACTCTAGCTTTT 57.662 34.783 0.00 0.00 0.00 2.27
104 105 5.105351 ACTTTGTTTTTGCCACTCTAGCTTT 60.105 36.000 0.00 0.00 0.00 3.51
105 106 4.402474 ACTTTGTTTTTGCCACTCTAGCTT 59.598 37.500 0.00 0.00 0.00 3.74
106 107 3.954258 ACTTTGTTTTTGCCACTCTAGCT 59.046 39.130 0.00 0.00 0.00 3.32
107 108 4.307443 ACTTTGTTTTTGCCACTCTAGC 57.693 40.909 0.00 0.00 0.00 3.42
108 109 7.595311 AAAAACTTTGTTTTTGCCACTCTAG 57.405 32.000 16.98 0.00 31.17 2.43
156 157 0.394938 TGCTCCCGTTGCTTCTACAA 59.605 50.000 0.00 0.00 0.00 2.41
169 170 1.363807 GCCACAACACTTTGCTCCC 59.636 57.895 0.00 0.00 36.00 4.30
241 242 0.250901 GTGTGTTGCCCATGAGTCCT 60.251 55.000 0.00 0.00 0.00 3.85
271 272 3.137533 TGTTTGCCTTAAAAATGCTGGC 58.862 40.909 0.00 0.00 43.49 4.85
275 276 4.987912 TGCTACTGTTTGCCTTAAAAATGC 59.012 37.500 0.00 0.00 0.00 3.56
330 331 4.580995 TGTTGGTATTAACCTTGGTGTGTG 59.419 41.667 0.00 0.00 46.91 3.82
371 372 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
372 373 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
373 374 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
374 375 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
375 376 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
376 377 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
424 425 9.621629 TCAAGAGAGGAACAACAAATAAAAGTA 57.378 29.630 0.00 0.00 0.00 2.24
425 426 8.519799 TCAAGAGAGGAACAACAAATAAAAGT 57.480 30.769 0.00 0.00 0.00 2.66
426 427 9.971922 ATTCAAGAGAGGAACAACAAATAAAAG 57.028 29.630 0.00 0.00 0.00 2.27
434 435 9.177608 CCATATTAATTCAAGAGAGGAACAACA 57.822 33.333 0.00 0.00 0.00 3.33
435 436 9.178758 ACCATATTAATTCAAGAGAGGAACAAC 57.821 33.333 0.00 0.00 0.00 3.32
436 437 9.177608 CACCATATTAATTCAAGAGAGGAACAA 57.822 33.333 0.00 0.00 0.00 2.83
437 438 7.775093 CCACCATATTAATTCAAGAGAGGAACA 59.225 37.037 0.00 0.00 0.00 3.18
438 439 7.255277 GCCACCATATTAATTCAAGAGAGGAAC 60.255 40.741 0.00 0.00 0.00 3.62
439 440 6.772716 GCCACCATATTAATTCAAGAGAGGAA 59.227 38.462 0.00 0.00 0.00 3.36
440 441 6.101734 AGCCACCATATTAATTCAAGAGAGGA 59.898 38.462 0.00 0.00 0.00 3.71
441 442 6.302269 AGCCACCATATTAATTCAAGAGAGG 58.698 40.000 0.00 0.00 0.00 3.69
442 443 8.908786 TTAGCCACCATATTAATTCAAGAGAG 57.091 34.615 0.00 0.00 0.00 3.20
443 444 9.866655 ATTTAGCCACCATATTAATTCAAGAGA 57.133 29.630 0.00 0.00 0.00 3.10
445 446 9.866655 AGATTTAGCCACCATATTAATTCAAGA 57.133 29.630 0.00 0.00 0.00 3.02
451 452 9.740710 GGTCTAAGATTTAGCCACCATATTAAT 57.259 33.333 0.00 0.00 0.00 1.40
452 453 8.719596 TGGTCTAAGATTTAGCCACCATATTAA 58.280 33.333 5.69 0.00 0.00 1.40
453 454 8.154856 GTGGTCTAAGATTTAGCCACCATATTA 58.845 37.037 20.04 0.00 36.57 0.98
454 455 6.998673 GTGGTCTAAGATTTAGCCACCATATT 59.001 38.462 20.04 0.00 36.57 1.28
455 456 6.330250 AGTGGTCTAAGATTTAGCCACCATAT 59.670 38.462 23.44 12.54 39.90 1.78
456 457 5.665812 AGTGGTCTAAGATTTAGCCACCATA 59.334 40.000 23.44 2.88 39.90 2.74
457 458 4.475016 AGTGGTCTAAGATTTAGCCACCAT 59.525 41.667 23.44 13.18 39.90 3.55
458 459 3.844211 AGTGGTCTAAGATTTAGCCACCA 59.156 43.478 23.44 15.90 39.90 4.17
459 460 4.081087 TGAGTGGTCTAAGATTTAGCCACC 60.081 45.833 23.44 18.76 39.90 4.61
460 461 5.086104 TGAGTGGTCTAAGATTTAGCCAC 57.914 43.478 21.58 21.58 39.63 5.01
461 462 5.755409 TTGAGTGGTCTAAGATTTAGCCA 57.245 39.130 7.46 7.46 0.00 4.75
462 463 6.174049 AGTTTGAGTGGTCTAAGATTTAGCC 58.826 40.000 0.00 0.00 0.00 3.93
463 464 8.773404 TTAGTTTGAGTGGTCTAAGATTTAGC 57.227 34.615 0.00 0.00 0.00 3.09
466 467 9.574516 ACATTTAGTTTGAGTGGTCTAAGATTT 57.425 29.630 0.00 0.00 0.00 2.17
467 468 9.003658 CACATTTAGTTTGAGTGGTCTAAGATT 57.996 33.333 0.00 0.00 0.00 2.40
468 469 8.157476 ACACATTTAGTTTGAGTGGTCTAAGAT 58.843 33.333 0.00 0.00 34.65 2.40
469 470 7.506114 ACACATTTAGTTTGAGTGGTCTAAGA 58.494 34.615 0.00 0.00 34.65 2.10
470 471 7.730364 ACACATTTAGTTTGAGTGGTCTAAG 57.270 36.000 0.00 0.00 34.65 2.18
471 472 9.787435 AATACACATTTAGTTTGAGTGGTCTAA 57.213 29.630 0.00 0.00 34.65 2.10
472 473 9.787435 AAATACACATTTAGTTTGAGTGGTCTA 57.213 29.630 0.00 0.00 32.46 2.59
473 474 8.691661 AAATACACATTTAGTTTGAGTGGTCT 57.308 30.769 0.00 0.00 32.46 3.85
474 475 9.744468 AAAAATACACATTTAGTTTGAGTGGTC 57.256 29.630 0.00 0.00 33.09 4.02
475 476 9.528018 CAAAAATACACATTTAGTTTGAGTGGT 57.472 29.630 0.00 0.00 33.09 4.16
476 477 9.743057 TCAAAAATACACATTTAGTTTGAGTGG 57.257 29.630 0.00 0.00 33.09 4.00
484 485 9.185680 GGGGTATCTCAAAAATACACATTTAGT 57.814 33.333 0.00 0.00 35.17 2.24
485 486 8.342634 CGGGGTATCTCAAAAATACACATTTAG 58.657 37.037 0.00 0.00 35.17 1.85
486 487 7.201750 GCGGGGTATCTCAAAAATACACATTTA 60.202 37.037 0.00 0.00 35.17 1.40
487 488 6.405397 GCGGGGTATCTCAAAAATACACATTT 60.405 38.462 0.00 0.00 35.17 2.32
488 489 5.067283 GCGGGGTATCTCAAAAATACACATT 59.933 40.000 0.00 0.00 35.17 2.71
489 490 4.578928 GCGGGGTATCTCAAAAATACACAT 59.421 41.667 0.00 0.00 35.17 3.21
490 491 3.942748 GCGGGGTATCTCAAAAATACACA 59.057 43.478 0.00 0.00 35.17 3.72
491 492 4.035208 CAGCGGGGTATCTCAAAAATACAC 59.965 45.833 0.00 0.00 33.15 2.90
492 493 4.080807 TCAGCGGGGTATCTCAAAAATACA 60.081 41.667 0.00 0.00 32.35 2.29
493 494 4.448210 TCAGCGGGGTATCTCAAAAATAC 58.552 43.478 0.00 0.00 0.00 1.89
494 495 4.764050 TCAGCGGGGTATCTCAAAAATA 57.236 40.909 0.00 0.00 0.00 1.40
495 496 3.644966 TCAGCGGGGTATCTCAAAAAT 57.355 42.857 0.00 0.00 0.00 1.82
496 497 3.078837 GTTCAGCGGGGTATCTCAAAAA 58.921 45.455 0.00 0.00 0.00 1.94
497 498 2.304761 AGTTCAGCGGGGTATCTCAAAA 59.695 45.455 0.00 0.00 0.00 2.44
498 499 1.906574 AGTTCAGCGGGGTATCTCAAA 59.093 47.619 0.00 0.00 0.00 2.69
499 500 1.568504 AGTTCAGCGGGGTATCTCAA 58.431 50.000 0.00 0.00 0.00 3.02
500 501 1.568504 AAGTTCAGCGGGGTATCTCA 58.431 50.000 0.00 0.00 0.00 3.27
501 502 3.814005 TTAAGTTCAGCGGGGTATCTC 57.186 47.619 0.00 0.00 0.00 2.75
502 503 3.262405 TGTTTAAGTTCAGCGGGGTATCT 59.738 43.478 0.00 0.00 0.00 1.98
503 504 3.602483 TGTTTAAGTTCAGCGGGGTATC 58.398 45.455 0.00 0.00 0.00 2.24
504 505 3.706600 TGTTTAAGTTCAGCGGGGTAT 57.293 42.857 0.00 0.00 0.00 2.73
505 506 3.262405 AGATGTTTAAGTTCAGCGGGGTA 59.738 43.478 0.00 0.00 0.00 3.69
506 507 2.039879 AGATGTTTAAGTTCAGCGGGGT 59.960 45.455 0.00 0.00 0.00 4.95
507 508 2.678336 GAGATGTTTAAGTTCAGCGGGG 59.322 50.000 0.00 0.00 0.00 5.73
508 509 3.334691 TGAGATGTTTAAGTTCAGCGGG 58.665 45.455 0.00 0.00 0.00 6.13
509 510 5.356882 TTTGAGATGTTTAAGTTCAGCGG 57.643 39.130 0.00 0.00 0.00 5.52
510 511 7.077605 TCAATTTGAGATGTTTAAGTTCAGCG 58.922 34.615 0.00 0.00 0.00 5.18
511 512 8.976986 ATCAATTTGAGATGTTTAAGTTCAGC 57.023 30.769 5.21 0.00 0.00 4.26
548 549 9.582648 TGTGTAGACTGGTAGAATGCTTATATA 57.417 33.333 0.00 0.00 0.00 0.86
549 550 8.478775 TGTGTAGACTGGTAGAATGCTTATAT 57.521 34.615 0.00 0.00 0.00 0.86
550 551 7.891498 TGTGTAGACTGGTAGAATGCTTATA 57.109 36.000 0.00 0.00 0.00 0.98
551 552 6.791867 TGTGTAGACTGGTAGAATGCTTAT 57.208 37.500 0.00 0.00 0.00 1.73
552 553 6.791867 ATGTGTAGACTGGTAGAATGCTTA 57.208 37.500 0.00 0.00 0.00 3.09
553 554 5.683876 ATGTGTAGACTGGTAGAATGCTT 57.316 39.130 0.00 0.00 0.00 3.91
554 555 5.683876 AATGTGTAGACTGGTAGAATGCT 57.316 39.130 0.00 0.00 0.00 3.79
555 556 5.463724 GCTAATGTGTAGACTGGTAGAATGC 59.536 44.000 0.00 0.00 0.00 3.56
556 557 6.573434 TGCTAATGTGTAGACTGGTAGAATG 58.427 40.000 0.00 0.00 0.00 2.67
565 855 7.042456 CGATAAAGCATTGCTAATGTGTAGACT 60.042 37.037 12.39 0.00 38.25 3.24
566 856 7.042725 TCGATAAAGCATTGCTAATGTGTAGAC 60.043 37.037 12.39 0.00 38.25 2.59
568 858 7.042456 AGTCGATAAAGCATTGCTAATGTGTAG 60.042 37.037 12.39 0.00 38.25 2.74
615 906 6.795144 TGATGGAATGGAATAATGCAAACT 57.205 33.333 0.00 0.00 0.00 2.66
687 978 9.745018 AAGAAGAATGATTTATGGAGTGAGAAA 57.255 29.630 0.00 0.00 0.00 2.52
713 1004 1.022451 GGGAATTTGTAGCGCCGTGA 61.022 55.000 2.29 0.00 0.00 4.35
718 1009 1.312371 TGCCTGGGAATTTGTAGCGC 61.312 55.000 0.00 0.00 0.00 5.92
733 1024 1.762522 CTAGATGATGCCCCGTGCCT 61.763 60.000 0.00 0.00 40.16 4.75
734 1025 1.302033 CTAGATGATGCCCCGTGCC 60.302 63.158 0.00 0.00 40.16 5.01
737 1034 3.769844 CCTTATACTAGATGATGCCCCGT 59.230 47.826 0.00 0.00 0.00 5.28
774 1071 9.379770 CCCCCTCCTTATATATGATTTGTTTTT 57.620 33.333 0.00 0.00 0.00 1.94
775 1072 8.742437 TCCCCCTCCTTATATATGATTTGTTTT 58.258 33.333 0.00 0.00 0.00 2.43
776 1073 8.300752 TCCCCCTCCTTATATATGATTTGTTT 57.699 34.615 0.00 0.00 0.00 2.83
777 1074 7.905144 TCCCCCTCCTTATATATGATTTGTT 57.095 36.000 0.00 0.00 0.00 2.83
778 1075 7.905144 TTCCCCCTCCTTATATATGATTTGT 57.095 36.000 0.00 0.00 0.00 2.83
779 1076 9.247861 CTTTTCCCCCTCCTTATATATGATTTG 57.752 37.037 0.00 0.00 0.00 2.32
780 1077 9.194512 TCTTTTCCCCCTCCTTATATATGATTT 57.805 33.333 0.00 0.00 0.00 2.17
781 1078 8.615705 GTCTTTTCCCCCTCCTTATATATGATT 58.384 37.037 0.00 0.00 0.00 2.57
782 1079 7.744068 TGTCTTTTCCCCCTCCTTATATATGAT 59.256 37.037 0.00 0.00 0.00 2.45
783 1080 7.086260 TGTCTTTTCCCCCTCCTTATATATGA 58.914 38.462 0.00 0.00 0.00 2.15
784 1081 7.329746 TGTCTTTTCCCCCTCCTTATATATG 57.670 40.000 0.00 0.00 0.00 1.78
785 1082 7.964730 TTGTCTTTTCCCCCTCCTTATATAT 57.035 36.000 0.00 0.00 0.00 0.86
786 1083 7.964730 ATTGTCTTTTCCCCCTCCTTATATA 57.035 36.000 0.00 0.00 0.00 0.86
787 1084 6.865651 ATTGTCTTTTCCCCCTCCTTATAT 57.134 37.500 0.00 0.00 0.00 0.86
788 1085 7.256547 CGATATTGTCTTTTCCCCCTCCTTATA 60.257 40.741 0.00 0.00 0.00 0.98
789 1086 6.465894 CGATATTGTCTTTTCCCCCTCCTTAT 60.466 42.308 0.00 0.00 0.00 1.73
790 1087 5.163237 CGATATTGTCTTTTCCCCCTCCTTA 60.163 44.000 0.00 0.00 0.00 2.69
791 1088 4.385310 CGATATTGTCTTTTCCCCCTCCTT 60.385 45.833 0.00 0.00 0.00 3.36
792 1089 3.136626 CGATATTGTCTTTTCCCCCTCCT 59.863 47.826 0.00 0.00 0.00 3.69
793 1090 3.118000 ACGATATTGTCTTTTCCCCCTCC 60.118 47.826 0.00 0.00 0.00 4.30
794 1091 3.877508 CACGATATTGTCTTTTCCCCCTC 59.122 47.826 0.00 0.00 0.00 4.30
795 1092 3.886123 CACGATATTGTCTTTTCCCCCT 58.114 45.455 0.00 0.00 0.00 4.79
796 1093 2.357952 GCACGATATTGTCTTTTCCCCC 59.642 50.000 0.00 0.00 0.00 5.40
797 1094 2.357952 GGCACGATATTGTCTTTTCCCC 59.642 50.000 0.00 0.00 0.00 4.81
798 1095 3.013921 TGGCACGATATTGTCTTTTCCC 58.986 45.455 0.00 0.00 0.00 3.97
799 1096 3.689649 ACTGGCACGATATTGTCTTTTCC 59.310 43.478 0.00 0.00 0.00 3.13
800 1097 4.391830 TGACTGGCACGATATTGTCTTTTC 59.608 41.667 0.00 0.00 0.00 2.29
801 1098 4.323417 TGACTGGCACGATATTGTCTTTT 58.677 39.130 0.00 0.00 0.00 2.27
802 1099 3.935203 CTGACTGGCACGATATTGTCTTT 59.065 43.478 0.00 0.00 0.00 2.52
803 1100 3.525537 CTGACTGGCACGATATTGTCTT 58.474 45.455 0.00 0.00 0.00 3.01
804 1101 2.159043 CCTGACTGGCACGATATTGTCT 60.159 50.000 0.00 0.00 0.00 3.41
805 1102 2.159099 TCCTGACTGGCACGATATTGTC 60.159 50.000 0.00 0.00 35.26 3.18
806 1103 1.831106 TCCTGACTGGCACGATATTGT 59.169 47.619 0.00 0.00 35.26 2.71
807 1104 2.602257 TCCTGACTGGCACGATATTG 57.398 50.000 0.00 0.00 35.26 1.90
808 1105 3.134623 TGAATCCTGACTGGCACGATATT 59.865 43.478 0.00 0.00 35.26 1.28
809 1106 2.700371 TGAATCCTGACTGGCACGATAT 59.300 45.455 0.00 0.00 35.26 1.63
810 1107 2.107366 TGAATCCTGACTGGCACGATA 58.893 47.619 0.00 0.00 35.26 2.92
811 1108 0.904649 TGAATCCTGACTGGCACGAT 59.095 50.000 0.00 0.00 35.26 3.73
812 1109 0.904649 ATGAATCCTGACTGGCACGA 59.095 50.000 0.00 0.00 35.26 4.35
813 1110 1.012086 CATGAATCCTGACTGGCACG 58.988 55.000 0.00 0.00 35.26 5.34
814 1111 2.119801 ACATGAATCCTGACTGGCAC 57.880 50.000 0.00 0.00 35.26 5.01
815 1112 2.885135 AACATGAATCCTGACTGGCA 57.115 45.000 0.00 0.00 35.26 4.92
816 1113 3.065925 GCTAAACATGAATCCTGACTGGC 59.934 47.826 0.00 0.00 35.26 4.85
817 1114 3.310774 CGCTAAACATGAATCCTGACTGG 59.689 47.826 0.00 0.00 37.10 4.00
818 1115 3.310774 CCGCTAAACATGAATCCTGACTG 59.689 47.826 0.00 0.00 0.00 3.51
819 1116 3.055094 ACCGCTAAACATGAATCCTGACT 60.055 43.478 0.00 0.00 0.00 3.41
820 1117 3.270877 ACCGCTAAACATGAATCCTGAC 58.729 45.455 0.00 0.00 0.00 3.51
821 1118 3.627395 ACCGCTAAACATGAATCCTGA 57.373 42.857 0.00 0.00 0.00 3.86
822 1119 4.701956 AAACCGCTAAACATGAATCCTG 57.298 40.909 0.00 0.00 0.00 3.86
823 1120 5.722021 AAAAACCGCTAAACATGAATCCT 57.278 34.783 0.00 0.00 0.00 3.24
844 1141 7.537991 CCGCGAAACTTATTACCATGTTAAAAA 59.462 33.333 8.23 0.00 0.00 1.94
845 1142 7.022384 CCGCGAAACTTATTACCATGTTAAAA 58.978 34.615 8.23 0.00 0.00 1.52
846 1143 6.149142 ACCGCGAAACTTATTACCATGTTAAA 59.851 34.615 8.23 0.00 0.00 1.52
847 1144 5.642919 ACCGCGAAACTTATTACCATGTTAA 59.357 36.000 8.23 0.00 0.00 2.01
848 1145 5.177326 ACCGCGAAACTTATTACCATGTTA 58.823 37.500 8.23 0.00 0.00 2.41
849 1146 4.004982 ACCGCGAAACTTATTACCATGTT 58.995 39.130 8.23 0.00 0.00 2.71
850 1147 3.602483 ACCGCGAAACTTATTACCATGT 58.398 40.909 8.23 0.00 0.00 3.21
851 1148 4.609691 AACCGCGAAACTTATTACCATG 57.390 40.909 8.23 0.00 0.00 3.66
852 1149 6.050432 TCATAACCGCGAAACTTATTACCAT 58.950 36.000 8.23 0.00 0.00 3.55
853 1150 5.417811 TCATAACCGCGAAACTTATTACCA 58.582 37.500 8.23 0.00 0.00 3.25
854 1151 5.750067 TCTCATAACCGCGAAACTTATTACC 59.250 40.000 8.23 0.00 0.00 2.85
855 1152 6.474751 AGTCTCATAACCGCGAAACTTATTAC 59.525 38.462 8.23 0.00 0.00 1.89
856 1153 6.567050 AGTCTCATAACCGCGAAACTTATTA 58.433 36.000 8.23 0.00 0.00 0.98
857 1154 5.416947 AGTCTCATAACCGCGAAACTTATT 58.583 37.500 8.23 0.00 0.00 1.40
858 1155 5.007385 AGTCTCATAACCGCGAAACTTAT 57.993 39.130 8.23 0.00 0.00 1.73
859 1156 4.445452 AGTCTCATAACCGCGAAACTTA 57.555 40.909 8.23 0.00 0.00 2.24
860 1157 3.314541 AGTCTCATAACCGCGAAACTT 57.685 42.857 8.23 0.00 0.00 2.66
861 1158 3.428589 GGTAGTCTCATAACCGCGAAACT 60.429 47.826 8.23 1.38 0.00 2.66
862 1159 2.856557 GGTAGTCTCATAACCGCGAAAC 59.143 50.000 8.23 0.00 0.00 2.78
863 1160 3.155093 GGTAGTCTCATAACCGCGAAA 57.845 47.619 8.23 0.00 0.00 3.46
864 1161 2.857592 GGTAGTCTCATAACCGCGAA 57.142 50.000 8.23 0.00 0.00 4.70
899 1196 4.035017 CGTGTTGATGTGTTCCTTTTGAC 58.965 43.478 0.00 0.00 0.00 3.18
900 1197 3.942115 TCGTGTTGATGTGTTCCTTTTGA 59.058 39.130 0.00 0.00 0.00 2.69
901 1198 4.035017 GTCGTGTTGATGTGTTCCTTTTG 58.965 43.478 0.00 0.00 0.00 2.44
926 1226 2.167219 CGGTCTGCGTGATTGCGAT 61.167 57.895 0.00 0.00 37.81 4.58
973 1280 2.751688 GGTTGTAGGGTTCCGGCA 59.248 61.111 0.00 0.00 0.00 5.69
1064 1371 1.146263 GAGTTCGGCGGGATGGAAT 59.854 57.895 7.21 0.00 0.00 3.01
1076 1383 1.173913 GATTTGGGGGTTGGAGTTCG 58.826 55.000 0.00 0.00 0.00 3.95
1081 1388 2.562998 GGGGGATTTGGGGGTTGGA 61.563 63.158 0.00 0.00 0.00 3.53
1137 1444 2.183555 CCTCCCGTAACAGCCGAC 59.816 66.667 0.00 0.00 0.00 4.79
1145 1452 1.672854 CGTGGATCTGCCTCCCGTAA 61.673 60.000 0.00 0.00 37.63 3.18
1313 1620 1.450312 GGGAAGGTCATCTGCGTGG 60.450 63.158 0.00 0.00 0.00 4.94
1445 1752 1.073897 GTTGGCTGGAACTGGAGCT 59.926 57.895 0.00 0.00 35.42 4.09
1727 2034 1.081892 CTGGCGTTGATGTGGAGAAG 58.918 55.000 0.00 0.00 0.00 2.85
1821 2128 1.568504 TAAGATGGGGAAGTCGCTGT 58.431 50.000 0.00 0.00 0.00 4.40
2242 2549 2.502947 TCATTCACATCCTCTCCTGTGG 59.497 50.000 3.14 0.00 42.37 4.17
2287 2594 4.806640 AATGCCACAATTCTACCAAAGG 57.193 40.909 0.00 0.00 0.00 3.11
2309 2616 7.254227 ACAATTCACGCTTTTCAAAGTAGTA 57.746 32.000 1.37 0.00 38.28 1.82
2310 2617 6.131544 ACAATTCACGCTTTTCAAAGTAGT 57.868 33.333 1.37 0.10 38.28 2.73
2311 2618 8.728088 AATACAATTCACGCTTTTCAAAGTAG 57.272 30.769 1.37 0.00 38.28 2.57
2383 2845 9.794719 CTATGACTAATGGGAGGTATATCGATA 57.205 37.037 7.75 7.75 0.00 2.92
2425 2895 5.395768 GGGACTATATACATGTGCTCCATCC 60.396 48.000 9.11 8.81 0.00 3.51
2472 2944 0.038526 GTCAGGTACGTGGGACTGTG 60.039 60.000 15.15 0.00 32.92 3.66
2473 2945 1.521450 CGTCAGGTACGTGGGACTGT 61.521 60.000 15.15 0.00 46.72 3.55
2474 2946 1.211969 CGTCAGGTACGTGGGACTG 59.788 63.158 15.15 1.09 46.72 3.51
2497 2969 5.104982 TGTCAGATGGCATTGTACATAGTGA 60.105 40.000 0.00 0.00 0.00 3.41
2509 2981 5.336690 GGTGTACAAAAATGTCAGATGGCAT 60.337 40.000 0.00 0.00 43.07 4.40
2564 3036 1.203441 AGGCCTGATGAAGAGCCACA 61.203 55.000 3.11 0.00 41.96 4.17
2580 3052 0.307760 CACACTCAACCGAACAAGGC 59.692 55.000 0.00 0.00 33.69 4.35
2581 3053 0.944386 CCACACTCAACCGAACAAGG 59.056 55.000 0.00 0.00 37.30 3.61
2582 3054 1.948104 TCCACACTCAACCGAACAAG 58.052 50.000 0.00 0.00 0.00 3.16
2583 3055 2.489971 GATCCACACTCAACCGAACAA 58.510 47.619 0.00 0.00 0.00 2.83
2584 3056 1.270625 GGATCCACACTCAACCGAACA 60.271 52.381 6.95 0.00 0.00 3.18
2585 3057 1.439679 GGATCCACACTCAACCGAAC 58.560 55.000 6.95 0.00 0.00 3.95
2586 3058 0.037697 CGGATCCACACTCAACCGAA 60.038 55.000 13.41 0.00 42.40 4.30
2587 3059 1.183030 ACGGATCCACACTCAACCGA 61.183 55.000 13.41 0.00 42.40 4.69
2588 3060 1.014044 CACGGATCCACACTCAACCG 61.014 60.000 13.41 0.00 44.77 4.44
2589 3061 0.673644 CCACGGATCCACACTCAACC 60.674 60.000 13.41 0.00 0.00 3.77
2594 3066 1.306997 ATCCCCACGGATCCACACT 60.307 57.895 13.41 0.00 46.77 3.55
2595 3067 3.320359 ATCCCCACGGATCCACAC 58.680 61.111 13.41 0.00 46.77 3.82
2604 3882 0.251608 AAACCCCTTCAATCCCCACG 60.252 55.000 0.00 0.00 0.00 4.94
2605 3883 2.024176 AAAACCCCTTCAATCCCCAC 57.976 50.000 0.00 0.00 0.00 4.61
2607 3885 3.104512 CCTTAAAACCCCTTCAATCCCC 58.895 50.000 0.00 0.00 0.00 4.81
2611 3889 5.552430 ATCCTCCTTAAAACCCCTTCAAT 57.448 39.130 0.00 0.00 0.00 2.57
2616 3894 7.549147 GTTTTAAATCCTCCTTAAAACCCCT 57.451 36.000 15.27 0.00 45.25 4.79
2622 3900 9.657728 TTACAAGGGTTTTAAATCCTCCTTAAA 57.342 29.630 10.23 0.00 33.77 1.52
2624 3902 8.450434 ACTTACAAGGGTTTTAAATCCTCCTTA 58.550 33.333 10.23 0.00 33.77 2.69
2629 3907 8.541899 TTTGACTTACAAGGGTTTTAAATCCT 57.458 30.769 3.24 3.24 39.77 3.24
2636 3914 9.143155 AGATGTATTTTGACTTACAAGGGTTTT 57.857 29.630 0.00 0.00 39.77 2.43
2639 3917 9.802039 TTAAGATGTATTTTGACTTACAAGGGT 57.198 29.630 0.00 0.00 39.77 4.34
2647 3925 8.398665 GGCGAGAATTAAGATGTATTTTGACTT 58.601 33.333 0.00 0.00 0.00 3.01
2649 3927 7.693952 TGGCGAGAATTAAGATGTATTTTGAC 58.306 34.615 0.00 0.00 0.00 3.18
2650 3928 7.857734 TGGCGAGAATTAAGATGTATTTTGA 57.142 32.000 0.00 0.00 0.00 2.69
2651 3929 9.173939 GATTGGCGAGAATTAAGATGTATTTTG 57.826 33.333 0.00 0.00 0.00 2.44
2652 3930 8.352942 GGATTGGCGAGAATTAAGATGTATTTT 58.647 33.333 0.00 0.00 0.00 1.82
2653 3931 7.040409 GGGATTGGCGAGAATTAAGATGTATTT 60.040 37.037 0.00 0.00 0.00 1.40
2654 3932 6.431234 GGGATTGGCGAGAATTAAGATGTATT 59.569 38.462 0.00 0.00 0.00 1.89
2655 3933 5.940470 GGGATTGGCGAGAATTAAGATGTAT 59.060 40.000 0.00 0.00 0.00 2.29
2656 3934 5.305585 GGGATTGGCGAGAATTAAGATGTA 58.694 41.667 0.00 0.00 0.00 2.29
2657 3935 4.137543 GGGATTGGCGAGAATTAAGATGT 58.862 43.478 0.00 0.00 0.00 3.06
2658 3936 3.503748 GGGGATTGGCGAGAATTAAGATG 59.496 47.826 0.00 0.00 0.00 2.90
2659 3937 3.395941 AGGGGATTGGCGAGAATTAAGAT 59.604 43.478 0.00 0.00 0.00 2.40
2660 3938 2.777692 AGGGGATTGGCGAGAATTAAGA 59.222 45.455 0.00 0.00 0.00 2.10
2661 3939 3.142174 GAGGGGATTGGCGAGAATTAAG 58.858 50.000 0.00 0.00 0.00 1.85
2662 3940 2.158667 GGAGGGGATTGGCGAGAATTAA 60.159 50.000 0.00 0.00 0.00 1.40
2664 3942 0.183731 GGAGGGGATTGGCGAGAATT 59.816 55.000 0.00 0.00 0.00 2.17
2665 3943 0.988145 TGGAGGGGATTGGCGAGAAT 60.988 55.000 0.00 0.00 0.00 2.40
2666 3944 1.204786 TTGGAGGGGATTGGCGAGAA 61.205 55.000 0.00 0.00 0.00 2.87
2667 3945 0.988145 ATTGGAGGGGATTGGCGAGA 60.988 55.000 0.00 0.00 0.00 4.04
2668 3946 0.106519 AATTGGAGGGGATTGGCGAG 60.107 55.000 0.00 0.00 0.00 5.03
2669 3947 0.106719 GAATTGGAGGGGATTGGCGA 60.107 55.000 0.00 0.00 0.00 5.54
2670 3948 0.106519 AGAATTGGAGGGGATTGGCG 60.107 55.000 0.00 0.00 0.00 5.69
2671 3949 1.216427 AGAGAATTGGAGGGGATTGGC 59.784 52.381 0.00 0.00 0.00 4.52
2672 3950 3.294214 CAAGAGAATTGGAGGGGATTGG 58.706 50.000 0.00 0.00 0.00 3.16
2673 3951 3.294214 CCAAGAGAATTGGAGGGGATTG 58.706 50.000 0.12 0.00 42.06 2.67
2674 3952 2.245806 CCCAAGAGAATTGGAGGGGATT 59.754 50.000 8.20 0.00 42.06 3.01
2675 3953 1.855599 CCCAAGAGAATTGGAGGGGAT 59.144 52.381 8.20 0.00 42.06 3.85
2676 3954 1.298953 CCCAAGAGAATTGGAGGGGA 58.701 55.000 8.20 0.00 42.06 4.81
2677 3955 3.911719 CCCAAGAGAATTGGAGGGG 57.088 57.895 8.20 0.00 42.06 4.79
2678 3956 1.213926 CTCCCCAAGAGAATTGGAGGG 59.786 57.143 8.20 2.36 46.50 4.30
2679 3957 2.725221 CTCCCCAAGAGAATTGGAGG 57.275 55.000 8.20 7.77 46.50 4.30
2689 3967 3.446968 TCGGTTAATTCTCTCCCCAAGA 58.553 45.455 0.00 0.00 0.00 3.02
2690 3968 3.906720 TCGGTTAATTCTCTCCCCAAG 57.093 47.619 0.00 0.00 0.00 3.61
2691 3969 3.328343 TGTTCGGTTAATTCTCTCCCCAA 59.672 43.478 0.00 0.00 0.00 4.12
2692 3970 2.907696 TGTTCGGTTAATTCTCTCCCCA 59.092 45.455 0.00 0.00 0.00 4.96
2693 3971 3.622166 TGTTCGGTTAATTCTCTCCCC 57.378 47.619 0.00 0.00 0.00 4.81
2694 3972 4.392138 CACTTGTTCGGTTAATTCTCTCCC 59.608 45.833 0.00 0.00 0.00 4.30
2695 3973 4.142881 GCACTTGTTCGGTTAATTCTCTCC 60.143 45.833 0.00 0.00 0.00 3.71
2696 3974 4.691216 AGCACTTGTTCGGTTAATTCTCTC 59.309 41.667 0.00 0.00 0.00 3.20
2697 3975 4.642429 AGCACTTGTTCGGTTAATTCTCT 58.358 39.130 0.00 0.00 0.00 3.10
2698 3976 4.451096 TGAGCACTTGTTCGGTTAATTCTC 59.549 41.667 0.00 0.00 0.00 2.87
2699 3977 4.385825 TGAGCACTTGTTCGGTTAATTCT 58.614 39.130 0.00 0.00 0.00 2.40
2700 3978 4.213482 ACTGAGCACTTGTTCGGTTAATTC 59.787 41.667 1.95 0.00 41.18 2.17
2701 3979 4.024048 CACTGAGCACTTGTTCGGTTAATT 60.024 41.667 4.91 0.00 41.18 1.40
2702 3980 3.498397 CACTGAGCACTTGTTCGGTTAAT 59.502 43.478 4.91 0.00 41.18 1.40
2703 3981 2.869801 CACTGAGCACTTGTTCGGTTAA 59.130 45.455 4.91 0.00 41.18 2.01
2704 3982 2.479837 CACTGAGCACTTGTTCGGTTA 58.520 47.619 4.91 0.00 41.18 2.85
2705 3983 1.299541 CACTGAGCACTTGTTCGGTT 58.700 50.000 4.91 0.00 41.18 4.44
2706 3984 0.532862 CCACTGAGCACTTGTTCGGT 60.533 55.000 1.95 1.95 44.10 4.69
2707 3985 1.230635 CCCACTGAGCACTTGTTCGG 61.231 60.000 0.69 0.69 37.61 4.30
2708 3986 1.230635 CCCCACTGAGCACTTGTTCG 61.231 60.000 0.00 0.00 0.00 3.95
2709 3987 0.108585 TCCCCACTGAGCACTTGTTC 59.891 55.000 0.00 0.00 0.00 3.18
2710 3988 0.550914 TTCCCCACTGAGCACTTGTT 59.449 50.000 0.00 0.00 0.00 2.83
2711 3989 0.550914 TTTCCCCACTGAGCACTTGT 59.449 50.000 0.00 0.00 0.00 3.16
2712 3990 1.542915 CATTTCCCCACTGAGCACTTG 59.457 52.381 0.00 0.00 0.00 3.16
2713 3991 1.145738 ACATTTCCCCACTGAGCACTT 59.854 47.619 0.00 0.00 0.00 3.16
2714 3992 0.773644 ACATTTCCCCACTGAGCACT 59.226 50.000 0.00 0.00 0.00 4.40
2715 3993 1.620822 AACATTTCCCCACTGAGCAC 58.379 50.000 0.00 0.00 0.00 4.40
2716 3994 2.364970 CAAAACATTTCCCCACTGAGCA 59.635 45.455 0.00 0.00 0.00 4.26
2717 3995 2.365293 ACAAAACATTTCCCCACTGAGC 59.635 45.455 0.00 0.00 0.00 4.26
2718 3996 4.670896 AACAAAACATTTCCCCACTGAG 57.329 40.909 0.00 0.00 0.00 3.35
2719 3997 5.659079 AGTTAACAAAACATTTCCCCACTGA 59.341 36.000 8.61 0.00 0.00 3.41
2720 3998 5.912892 AGTTAACAAAACATTTCCCCACTG 58.087 37.500 8.61 0.00 0.00 3.66
2721 3999 5.221165 CGAGTTAACAAAACATTTCCCCACT 60.221 40.000 8.61 0.00 0.00 4.00
2722 4000 4.979815 CGAGTTAACAAAACATTTCCCCAC 59.020 41.667 8.61 0.00 0.00 4.61
2723 4001 4.645588 ACGAGTTAACAAAACATTTCCCCA 59.354 37.500 8.61 0.00 0.00 4.96
2777 4055 2.041081 TGGAAGGTGACCCCAGTAATTG 59.959 50.000 0.00 0.00 34.66 2.32
2781 4059 0.838987 GGTGGAAGGTGACCCCAGTA 60.839 60.000 0.00 0.00 34.69 2.74
2782 4060 2.154074 GGTGGAAGGTGACCCCAGT 61.154 63.158 0.00 0.00 34.69 4.00
2828 4107 4.966366 GCAAACTATCATCGCACTTGAATC 59.034 41.667 0.00 0.00 0.00 2.52
2855 4134 0.957888 GCTGAGGGGACAAACAGAGC 60.958 60.000 0.00 0.00 32.70 4.09
2915 4194 3.519107 TCTGGTATGAGCTTGGACATCAA 59.481 43.478 0.00 0.00 0.00 2.57
3026 4305 9.748708 TTTGAAATGAACTACAATTTCAGAAGG 57.251 29.630 9.87 0.00 41.93 3.46
3049 4328 2.472488 GCAATTTGCTCCAAGTCGTTTG 59.528 45.455 14.11 0.00 40.96 2.93
3053 4332 2.053627 GTTGCAATTTGCTCCAAGTCG 58.946 47.619 21.19 0.00 45.31 4.18
3072 4351 2.499289 ACGGATCTGATGAGCTTGAAGT 59.501 45.455 9.00 0.00 0.00 3.01
3122 4402 6.215121 TCAGCCAATAATTTGTTTGACACAG 58.785 36.000 0.00 0.00 36.48 3.66
3130 4410 6.894103 AGATCCTTCTCAGCCAATAATTTGTT 59.106 34.615 0.00 0.00 0.00 2.83
3132 4412 6.956202 AGATCCTTCTCAGCCAATAATTTG 57.044 37.500 0.00 0.00 0.00 2.32
3133 4413 6.894103 ACAAGATCCTTCTCAGCCAATAATTT 59.106 34.615 0.00 0.00 0.00 1.82
3179 4459 9.403583 ACATAATAATGGAGTAACAAACCGATT 57.596 29.630 0.00 0.00 37.43 3.34
3216 4496 6.641169 TGACATGAGCACCTAGTTATCTAG 57.359 41.667 0.00 1.38 42.22 2.43
3223 4503 1.625315 TGCTTGACATGAGCACCTAGT 59.375 47.619 0.00 0.00 44.63 2.57
3227 4507 0.520404 CACTGCTTGACATGAGCACC 59.480 55.000 0.00 0.00 44.63 5.01
3228 4508 0.520404 CCACTGCTTGACATGAGCAC 59.480 55.000 0.00 0.00 44.63 4.40
3245 4525 8.707796 TCCAGTAACCATAAATTAACAAACCA 57.292 30.769 0.00 0.00 0.00 3.67
3280 4560 3.196254 GGTCTATCCCCGTGTTAACTTCA 59.804 47.826 7.22 0.00 0.00 3.02
3284 4564 2.159000 CCAGGTCTATCCCCGTGTTAAC 60.159 54.545 0.00 0.00 36.75 2.01
3286 4566 1.288633 TCCAGGTCTATCCCCGTGTTA 59.711 52.381 0.00 0.00 36.75 2.41
3287 4567 0.042131 TCCAGGTCTATCCCCGTGTT 59.958 55.000 0.00 0.00 36.75 3.32
3291 4571 2.901338 TCTATCCAGGTCTATCCCCG 57.099 55.000 0.00 0.00 36.75 5.73
3294 4574 7.067496 TGTTTTGATCTATCCAGGTCTATCC 57.933 40.000 0.00 0.00 32.64 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.