Multiple sequence alignment - TraesCS6A01G153600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G153600 chr6A 100.000 7667 0 0 710 8376 141358991 141366657 0.000000e+00 14159.0
1 TraesCS6A01G153600 chr6A 100.000 423 0 0 1 423 141358282 141358704 0.000000e+00 782.0
2 TraesCS6A01G153600 chr6B 95.376 3806 102 22 4086 7888 202595735 202599469 0.000000e+00 5986.0
3 TraesCS6A01G153600 chr6B 92.619 3414 121 62 759 4090 202592342 202595706 0.000000e+00 4787.0
4 TraesCS6A01G153600 chr6B 91.599 369 16 8 49 411 202591478 202591837 5.840000e-136 496.0
5 TraesCS6A01G153600 chr6B 84.375 96 9 5 8006 8100 694988635 694988545 1.160000e-13 89.8
6 TraesCS6A01G153600 chr6B 100.000 33 0 0 7912 7944 202599618 202599650 2.520000e-05 62.1
7 TraesCS6A01G153600 chr6B 100.000 29 0 0 3335 3363 202594931 202594903 4.000000e-03 54.7
8 TraesCS6A01G153600 chr6D 93.904 3379 99 54 776 4090 113500485 113503820 0.000000e+00 5000.0
9 TraesCS6A01G153600 chr6D 96.159 2317 56 9 4086 6402 113503849 113506132 0.000000e+00 3755.0
10 TraesCS6A01G153600 chr6D 91.887 1590 80 23 6400 7969 113507410 113508970 0.000000e+00 2176.0
11 TraesCS6A01G153600 chr6D 88.372 387 34 5 1 387 113499989 113500364 9.910000e-124 455.0
12 TraesCS6A01G153600 chr4A 98.182 165 3 0 8212 8376 186654133 186654297 1.060000e-73 289.0
13 TraesCS6A01G153600 chr4A 86.486 111 12 3 7993 8102 552225859 552225967 1.480000e-22 119.0
14 TraesCS6A01G153600 chr3A 96.970 165 4 1 8212 8376 550546722 550546559 8.280000e-70 276.0
15 TraesCS6A01G153600 chr3A 89.820 167 16 1 8211 8376 737729715 737729549 6.590000e-51 213.0
16 TraesCS6A01G153600 chr5B 96.364 165 6 0 8212 8376 652399574 652399738 1.070000e-68 272.0
17 TraesCS6A01G153600 chr1D 95.122 164 8 0 8213 8376 208112837 208112674 8.340000e-65 259.0
18 TraesCS6A01G153600 chr1D 84.375 96 9 5 8006 8100 481647437 481647527 1.160000e-13 89.8
19 TraesCS6A01G153600 chr2B 95.092 163 8 0 8213 8375 508761480 508761318 3.000000e-64 257.0
20 TraesCS6A01G153600 chr2B 93.252 163 11 0 8214 8376 72199281 72199119 3.020000e-59 241.0
21 TraesCS6A01G153600 chr7B 93.827 162 10 0 8212 8373 538693397 538693558 2.340000e-60 244.0
22 TraesCS6A01G153600 chr7B 83.962 106 13 4 7996 8099 477974672 477974775 1.920000e-16 99.0
23 TraesCS6A01G153600 chr1B 92.771 166 12 0 8211 8376 8566914 8566749 3.020000e-59 241.0
24 TraesCS6A01G153600 chr4D 82.727 110 10 4 7993 8102 68469995 68469895 1.160000e-13 89.8
25 TraesCS6A01G153600 chr2A 84.375 96 8 7 8006 8100 735393465 735393554 4.160000e-13 87.9
26 TraesCS6A01G153600 chr3D 81.197 117 12 9 7994 8104 332488883 332488995 1.500000e-12 86.1
27 TraesCS6A01G153600 chr5A 85.542 83 7 4 8017 8098 12181122 12181044 1.940000e-11 82.4
28 TraesCS6A01G153600 chr4B 80.392 102 13 5 8006 8102 652992966 652992867 4.190000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G153600 chr6A 141358282 141366657 8375 False 7470.500 14159 100.0000 1 8376 2 chr6A.!!$F1 8375
1 TraesCS6A01G153600 chr6B 202591478 202599650 8172 False 2832.775 5986 94.8985 49 7944 4 chr6B.!!$F1 7895
2 TraesCS6A01G153600 chr6D 113499989 113508970 8981 False 2846.500 5000 92.5805 1 7969 4 chr6D.!!$F1 7968

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
985 1232 0.389391 CCGATGGTCTGCTAATCCGT 59.611 55.000 0.00 0.0 0.00 4.69 F
1413 1674 0.107263 TCAGCTTGGTGCAACAGACA 60.107 50.000 3.79 0.0 45.94 3.41 F
2753 3018 0.391597 TCTCGGACAACCAACTCACC 59.608 55.000 0.00 0.0 35.59 4.02 F
4017 4332 1.279271 CTGGACCGATTCCTCCAAAGT 59.721 52.381 4.84 0.0 46.10 2.66 F
4213 4576 0.035739 TCTTTAACACCGACAGGCCC 59.964 55.000 0.00 0.0 42.76 5.80 F
4214 4577 0.036306 CTTTAACACCGACAGGCCCT 59.964 55.000 0.00 0.0 42.76 5.19 F
6000 6396 1.133884 GGCACCCCCAGTTCTATTACC 60.134 57.143 0.00 0.0 0.00 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1885 2146 4.072131 GCCAAATCAAGTACTTGGAGACA 58.928 43.478 30.35 14.81 41.88 3.41 R
3117 3383 5.232610 AGACATACAGCGTAACTAGTGAC 57.767 43.478 0.00 0.00 0.00 3.67 R
4141 4489 0.039618 TGGGTTCCCATCCTTTCTGC 59.960 55.000 6.46 0.00 0.00 4.26 R
5573 5969 1.541588 CAGCCCCTGAACAAGCTAAAC 59.458 52.381 0.00 0.00 33.33 2.01 R
5585 5981 2.077687 AAATATGAAGGCAGCCCCTG 57.922 50.000 8.22 0.00 45.62 4.45 R
6132 6528 4.587584 TCAGCAAATCATGTTTTCTGCA 57.412 36.364 13.14 0.00 0.00 4.41 R
7537 9217 0.325390 GGGCTGTACCACTACCTCCT 60.325 60.000 0.00 0.00 42.05 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 0.966179 ACCTTTGCGGGAAAATGACC 59.034 50.000 0.00 0.00 36.97 4.02
63 64 7.598869 TGACCGAAGAATTATATCCTGATTTCG 59.401 37.037 0.00 0.00 35.86 3.46
75 76 4.191544 TCCTGATTTCGAGCCAACAATAG 58.808 43.478 0.00 0.00 0.00 1.73
84 85 4.693566 TCGAGCCAACAATAGTAAACAAGG 59.306 41.667 0.00 0.00 0.00 3.61
87 88 6.575162 AGCCAACAATAGTAAACAAGGAAG 57.425 37.500 0.00 0.00 0.00 3.46
89 90 5.278758 GCCAACAATAGTAAACAAGGAAGCA 60.279 40.000 0.00 0.00 0.00 3.91
129 130 1.291877 CTCCACCAAGTAGCACGTGC 61.292 60.000 32.79 32.79 42.49 5.34
168 169 1.103398 CATCCATCCAAGGTTCCGCC 61.103 60.000 0.00 0.00 37.58 6.13
268 270 4.970003 CGCGAGAATAAAAATCCCATCAAC 59.030 41.667 0.00 0.00 0.00 3.18
412 431 2.712087 TCTCTATCTACCTCCTTCCGCT 59.288 50.000 0.00 0.00 0.00 5.52
748 959 4.329462 GAGACCTCTCTCTCTCTCTCTC 57.671 54.545 0.00 0.00 40.09 3.20
749 960 3.964031 GAGACCTCTCTCTCTCTCTCTCT 59.036 52.174 0.00 0.00 40.09 3.10
750 961 3.964031 AGACCTCTCTCTCTCTCTCTCTC 59.036 52.174 0.00 0.00 0.00 3.20
751 962 3.964031 GACCTCTCTCTCTCTCTCTCTCT 59.036 52.174 0.00 0.00 0.00 3.10
752 963 3.964031 ACCTCTCTCTCTCTCTCTCTCTC 59.036 52.174 0.00 0.00 0.00 3.20
753 964 4.222336 CCTCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
754 965 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
755 966 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
756 967 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
757 968 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
758 969 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
759 970 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
760 971 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
761 972 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
762 973 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
763 974 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
764 975 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
765 976 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
766 977 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
767 978 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
768 979 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
769 980 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
770 981 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
771 982 3.885901 TCTCTCTCTCTCTCTCTCTCTCG 59.114 52.174 0.00 0.00 0.00 4.04
772 983 2.959030 TCTCTCTCTCTCTCTCTCTCGG 59.041 54.545 0.00 0.00 0.00 4.63
773 984 2.036475 CTCTCTCTCTCTCTCTCTCGGG 59.964 59.091 0.00 0.00 0.00 5.14
774 985 2.039418 CTCTCTCTCTCTCTCTCGGGA 58.961 57.143 0.00 0.00 0.00 5.14
775 986 1.760613 TCTCTCTCTCTCTCTCGGGAC 59.239 57.143 0.00 0.00 0.00 4.46
776 987 1.762957 CTCTCTCTCTCTCTCGGGACT 59.237 57.143 0.00 0.00 0.00 3.85
777 988 1.760613 TCTCTCTCTCTCTCGGGACTC 59.239 57.143 0.00 0.00 0.00 3.36
778 989 0.834612 TCTCTCTCTCTCGGGACTCC 59.165 60.000 0.00 0.00 0.00 3.85
779 990 0.837272 CTCTCTCTCTCGGGACTCCT 59.163 60.000 0.00 0.00 0.00 3.69
854 1065 2.434336 GGAAAAGCAAAACCCCAAGTCT 59.566 45.455 0.00 0.00 0.00 3.24
985 1232 0.389391 CCGATGGTCTGCTAATCCGT 59.611 55.000 0.00 0.00 0.00 4.69
1168 1416 3.441290 CTGCTTGCTGGCTCTGGC 61.441 66.667 3.49 0.00 37.82 4.85
1169 1417 3.921936 CTGCTTGCTGGCTCTGGCT 62.922 63.158 3.49 0.00 38.73 4.75
1170 1418 3.132801 GCTTGCTGGCTCTGGCTC 61.133 66.667 0.00 0.00 38.73 4.70
1171 1419 2.818714 CTTGCTGGCTCTGGCTCG 60.819 66.667 0.00 0.00 38.73 5.03
1172 1420 4.399395 TTGCTGGCTCTGGCTCGG 62.399 66.667 0.00 0.00 38.73 4.63
1175 1423 4.463879 CTGGCTCTGGCTCGGTGG 62.464 72.222 0.00 0.00 38.73 4.61
1178 1426 4.828925 GCTCTGGCTCGGTGGCTC 62.829 72.222 5.23 0.00 42.34 4.70
1179 1427 3.073735 CTCTGGCTCGGTGGCTCT 61.074 66.667 5.23 0.00 42.34 4.09
1180 1428 3.368190 CTCTGGCTCGGTGGCTCTG 62.368 68.421 5.23 0.00 42.34 3.35
1181 1429 4.463879 CTGGCTCGGTGGCTCTGG 62.464 72.222 5.23 0.00 42.34 3.86
1188 1436 4.767255 GGTGGCTCTGGCTGACGG 62.767 72.222 0.00 0.00 38.73 4.79
1248 1496 1.343142 TGCTTCGTTTGGCTCTACTGA 59.657 47.619 0.00 0.00 0.00 3.41
1268 1519 2.112297 GTGCAGTTGTTCGGGGGA 59.888 61.111 0.00 0.00 0.00 4.81
1274 1525 0.251608 AGTTGTTCGGGGGAAATGGG 60.252 55.000 0.00 0.00 0.00 4.00
1305 1566 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
1310 1571 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
1315 1576 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
1337 1598 1.135141 TGGCGTTAATTTCCATGCAGC 60.135 47.619 0.00 0.00 0.00 5.25
1338 1599 1.135141 GGCGTTAATTTCCATGCAGCA 60.135 47.619 0.00 0.00 0.00 4.41
1341 1602 3.429085 CGTTAATTTCCATGCAGCACTC 58.571 45.455 0.00 0.00 0.00 3.51
1342 1603 3.127548 CGTTAATTTCCATGCAGCACTCT 59.872 43.478 0.00 0.00 0.00 3.24
1343 1604 4.418392 GTTAATTTCCATGCAGCACTCTG 58.582 43.478 0.00 0.00 43.16 3.35
1382 1643 3.199727 AGAAATGTGCTGGGTTTTGGTTT 59.800 39.130 0.00 0.00 0.00 3.27
1392 1653 1.001158 GGTTTTGGTTTCGCCGATTGA 60.001 47.619 0.00 0.00 41.21 2.57
1407 1668 2.095110 CGATTGATTCAGCTTGGTGCAA 60.095 45.455 0.00 0.00 45.94 4.08
1413 1674 0.107263 TCAGCTTGGTGCAACAGACA 60.107 50.000 3.79 0.00 45.94 3.41
1497 1758 4.680237 TGCCTGTCCGTGGAAGCG 62.680 66.667 0.00 0.00 0.00 4.68
1573 1834 2.030805 GCTGAGAGCGATGTTTTTGGTT 60.031 45.455 0.00 0.00 0.00 3.67
1578 1839 3.882888 AGAGCGATGTTTTTGGTTCTGAA 59.117 39.130 0.00 0.00 0.00 3.02
1631 1892 1.750206 CATTGTCGATGGCAATTGGGA 59.250 47.619 7.72 0.00 34.68 4.37
1672 1933 2.214376 TAGGATTTGGTTGCAGTGGG 57.786 50.000 0.00 0.00 0.00 4.61
1685 1946 1.067354 GCAGTGGGAAAAATGCAGGAG 60.067 52.381 0.00 0.00 38.54 3.69
1695 1956 1.589716 AATGCAGGAGAAAGGCGTGC 61.590 55.000 0.00 0.00 44.75 5.34
1743 2004 5.050490 GGATGCGAGCTTTGATCTAAGTTA 58.950 41.667 16.58 0.00 0.00 2.24
1744 2005 5.523916 GGATGCGAGCTTTGATCTAAGTTAA 59.476 40.000 16.58 3.16 0.00 2.01
1803 2064 1.066071 GGGTCTCAGTGGTAGAAAGCC 60.066 57.143 0.00 0.00 0.00 4.35
1913 2175 4.321230 CCAAGTACTTGATTTGGCTGTTCC 60.321 45.833 32.50 0.00 42.93 3.62
1917 2179 5.598417 AGTACTTGATTTGGCTGTTCCTTTT 59.402 36.000 0.00 0.00 35.26 2.27
1918 2180 6.775629 AGTACTTGATTTGGCTGTTCCTTTTA 59.224 34.615 0.00 0.00 35.26 1.52
1919 2181 5.842907 ACTTGATTTGGCTGTTCCTTTTAC 58.157 37.500 0.00 0.00 35.26 2.01
1920 2182 5.362430 ACTTGATTTGGCTGTTCCTTTTACA 59.638 36.000 0.00 0.00 35.26 2.41
1921 2183 5.195001 TGATTTGGCTGTTCCTTTTACAC 57.805 39.130 0.00 0.00 35.26 2.90
1923 2185 5.127845 TGATTTGGCTGTTCCTTTTACACAA 59.872 36.000 0.00 0.00 35.26 3.33
1924 2186 4.647424 TTGGCTGTTCCTTTTACACAAG 57.353 40.909 0.00 0.00 35.26 3.16
1925 2187 3.626930 TGGCTGTTCCTTTTACACAAGT 58.373 40.909 0.00 0.00 35.26 3.16
1927 2189 3.243401 GGCTGTTCCTTTTACACAAGTGG 60.243 47.826 5.08 0.00 34.19 4.00
2036 2300 2.380064 TGGCTTGTTTGTCCTTCCAT 57.620 45.000 0.00 0.00 0.00 3.41
2505 2769 5.715753 AGAAGTTACGTTGTCCTCTTATCCT 59.284 40.000 0.00 0.00 0.00 3.24
2513 2777 5.394663 CGTTGTCCTCTTATCCTGATTGAGT 60.395 44.000 8.18 0.00 0.00 3.41
2517 2781 7.106239 TGTCCTCTTATCCTGATTGAGTTTTC 58.894 38.462 8.18 0.00 0.00 2.29
2753 3018 0.391597 TCTCGGACAACCAACTCACC 59.608 55.000 0.00 0.00 35.59 4.02
2882 3148 4.774200 TCTCACTCAAGATCTGTCATTCCA 59.226 41.667 0.00 0.00 0.00 3.53
3057 3323 7.037438 ACATTTGAGCTTTTATCGCAATTCAT 58.963 30.769 0.00 0.00 0.00 2.57
3149 3415 3.181489 ACGCTGTATGTCTAGCCTACAAC 60.181 47.826 0.00 0.00 36.60 3.32
3171 3437 7.064966 ACAACTTCTTTCTTGCATTTTTCCTTG 59.935 33.333 0.00 0.00 0.00 3.61
3315 3581 7.025963 CCACATTCTCTTTGCTGATTTACTTC 58.974 38.462 0.00 0.00 0.00 3.01
3418 3691 5.587043 TGCTAAACAGAAACTTTCTTTCGGA 59.413 36.000 0.92 0.00 38.11 4.55
3434 3707 6.513180 TCTTTCGGACATTGTATAGACATCC 58.487 40.000 0.00 0.00 34.86 3.51
3555 3857 5.570320 AGGCTGTACAATTCCACATACTTT 58.430 37.500 0.00 0.00 0.00 2.66
3592 3894 4.100344 TCAGTTACACACTTGGCTCTGTAA 59.900 41.667 0.00 0.00 30.92 2.41
3598 3908 4.040461 ACACACTTGGCTCTGTAAGTACAT 59.960 41.667 0.00 0.00 35.50 2.29
3600 3910 4.997395 ACACTTGGCTCTGTAAGTACATTG 59.003 41.667 0.00 0.00 35.50 2.82
3602 3912 6.163476 CACTTGGCTCTGTAAGTACATTGTA 58.837 40.000 0.00 0.00 35.50 2.41
3609 3919 9.197694 GGCTCTGTAAGTACATTGTATAATCAG 57.802 37.037 0.00 7.49 35.36 2.90
3659 3970 5.720041 ACTGGTTATAAGGAACAGCTCACTA 59.280 40.000 0.00 0.00 0.00 2.74
3663 3974 6.926272 GGTTATAAGGAACAGCTCACTAGATG 59.074 42.308 0.00 0.00 44.88 2.90
3752 4064 7.773224 CCAGTTGTTTATCAGGACAATGGTATA 59.227 37.037 0.00 0.00 37.98 1.47
3780 4092 9.796120 CAGTATTTTGTTTCTTTCCTACAAACA 57.204 29.630 0.00 0.00 40.36 2.83
3806 4118 3.385193 ACAAAACAATAACCAGCCAGC 57.615 42.857 0.00 0.00 0.00 4.85
3893 4208 2.485426 ACTGTCGATCCAGTTTGCAATG 59.515 45.455 0.00 0.00 42.99 2.82
4017 4332 1.279271 CTGGACCGATTCCTCCAAAGT 59.721 52.381 4.84 0.00 46.10 2.66
4057 4372 8.902540 AATTTGAAGTAAGAAACATTTTCCCC 57.097 30.769 0.00 0.00 0.00 4.81
4067 4382 4.890158 AACATTTTCCCCATTTCAGGTC 57.110 40.909 0.00 0.00 0.00 3.85
4073 4388 5.528600 TTTCCCCATTTCAGGTCTATTGA 57.471 39.130 0.00 0.00 0.00 2.57
4201 4564 2.825861 TCCACGTCACCCTCTTTAAC 57.174 50.000 0.00 0.00 0.00 2.01
4202 4565 2.040939 TCCACGTCACCCTCTTTAACA 58.959 47.619 0.00 0.00 0.00 2.41
4203 4566 2.140717 CCACGTCACCCTCTTTAACAC 58.859 52.381 0.00 0.00 0.00 3.32
4204 4567 2.140717 CACGTCACCCTCTTTAACACC 58.859 52.381 0.00 0.00 0.00 4.16
4205 4568 1.269936 ACGTCACCCTCTTTAACACCG 60.270 52.381 0.00 0.00 0.00 4.94
4206 4569 1.000060 CGTCACCCTCTTTAACACCGA 60.000 52.381 0.00 0.00 0.00 4.69
4207 4570 2.410939 GTCACCCTCTTTAACACCGAC 58.589 52.381 0.00 0.00 0.00 4.79
4208 4571 2.040939 TCACCCTCTTTAACACCGACA 58.959 47.619 0.00 0.00 0.00 4.35
4209 4572 2.036733 TCACCCTCTTTAACACCGACAG 59.963 50.000 0.00 0.00 0.00 3.51
4210 4573 1.346722 ACCCTCTTTAACACCGACAGG 59.653 52.381 0.00 0.00 45.13 4.00
4211 4574 1.439679 CCTCTTTAACACCGACAGGC 58.560 55.000 0.00 0.00 42.76 4.85
4212 4575 1.439679 CTCTTTAACACCGACAGGCC 58.560 55.000 0.00 0.00 42.76 5.19
4213 4576 0.035739 TCTTTAACACCGACAGGCCC 59.964 55.000 0.00 0.00 42.76 5.80
4214 4577 0.036306 CTTTAACACCGACAGGCCCT 59.964 55.000 0.00 0.00 42.76 5.19
4215 4578 1.276989 CTTTAACACCGACAGGCCCTA 59.723 52.381 0.00 0.00 42.76 3.53
4446 4809 3.574826 GTCCAAGTACCAAGAGAGACAGT 59.425 47.826 0.00 0.00 0.00 3.55
4447 4810 3.827302 TCCAAGTACCAAGAGAGACAGTC 59.173 47.826 0.00 0.00 0.00 3.51
4448 4811 3.574396 CCAAGTACCAAGAGAGACAGTCA 59.426 47.826 2.66 0.00 0.00 3.41
4699 5062 3.721969 TGGCCATACCAGGTACAGA 57.278 52.632 0.00 0.00 46.36 3.41
4796 5165 2.360100 CTGCTGGCAGCTGCTCTT 60.360 61.111 36.50 0.00 42.97 2.85
4914 5310 4.562425 CGCCACCACCACCAGTGT 62.562 66.667 0.00 0.00 45.74 3.55
4915 5311 2.594592 GCCACCACCACCAGTGTC 60.595 66.667 0.00 0.00 45.74 3.67
4916 5312 2.113139 CCACCACCACCAGTGTCC 59.887 66.667 0.00 0.00 45.74 4.02
4917 5313 2.113139 CACCACCACCAGTGTCCC 59.887 66.667 0.00 0.00 45.74 4.46
4918 5314 3.175710 ACCACCACCAGTGTCCCC 61.176 66.667 0.00 0.00 45.74 4.81
4919 5315 3.174987 CCACCACCAGTGTCCCCA 61.175 66.667 0.00 0.00 45.74 4.96
4920 5316 2.113139 CACCACCAGTGTCCCCAC 59.887 66.667 0.00 0.00 41.93 4.61
4921 5317 3.175710 ACCACCAGTGTCCCCACC 61.176 66.667 0.00 0.00 42.88 4.61
4922 5318 3.174987 CCACCAGTGTCCCCACCA 61.175 66.667 0.00 0.00 42.88 4.17
4923 5319 2.113139 CACCAGTGTCCCCACCAC 59.887 66.667 0.00 0.00 42.88 4.16
4924 5320 3.175710 ACCAGTGTCCCCACCACC 61.176 66.667 0.00 0.00 42.88 4.61
4925 5321 3.174987 CCAGTGTCCCCACCACCA 61.175 66.667 0.00 0.00 42.88 4.17
4926 5322 2.113139 CAGTGTCCCCACCACCAC 59.887 66.667 0.00 0.00 42.88 4.16
4927 5323 3.175710 AGTGTCCCCACCACCACC 61.176 66.667 0.00 0.00 42.88 4.61
4928 5324 3.175710 GTGTCCCCACCACCACCT 61.176 66.667 0.00 0.00 35.44 4.00
4929 5325 2.852075 TGTCCCCACCACCACCTC 60.852 66.667 0.00 0.00 0.00 3.85
4930 5326 3.647771 GTCCCCACCACCACCTCC 61.648 72.222 0.00 0.00 0.00 4.30
4931 5327 4.194497 TCCCCACCACCACCTCCA 62.194 66.667 0.00 0.00 0.00 3.86
4932 5328 3.966543 CCCCACCACCACCTCCAC 61.967 72.222 0.00 0.00 0.00 4.02
4933 5329 3.966543 CCCACCACCACCTCCACC 61.967 72.222 0.00 0.00 0.00 4.61
4934 5330 4.329545 CCACCACCACCTCCACCG 62.330 72.222 0.00 0.00 0.00 4.94
5110 5506 9.573133 ACTTCAGCAATATACAAATAGTTTTGC 57.427 29.630 1.97 1.97 45.01 3.68
5139 5535 9.839817 AGGAAAATTTAATAAGAGAGAGTAGGC 57.160 33.333 0.00 0.00 0.00 3.93
5232 5628 8.242729 AGAGGATTTTAGGCTTATTGAAATGG 57.757 34.615 0.00 0.00 0.00 3.16
5245 5641 7.630242 TTATTGAAATGGTGTCCTCATCTTC 57.370 36.000 0.00 0.00 0.00 2.87
5555 5951 9.401058 AGTAAGCTGCATTCTACTTCAAAATAT 57.599 29.630 1.02 0.00 0.00 1.28
5904 6300 5.181690 TGGAACTGTATGTTTTGTCAAGC 57.818 39.130 0.00 0.00 39.30 4.01
6000 6396 1.133884 GGCACCCCCAGTTCTATTACC 60.134 57.143 0.00 0.00 0.00 2.85
6002 6398 2.682858 GCACCCCCAGTTCTATTACCAC 60.683 54.545 0.00 0.00 0.00 4.16
6267 6663 3.115554 TCATCGTGCATGAACATACTCG 58.884 45.455 13.65 0.00 38.68 4.18
6341 6737 6.836527 ACATTGACAGCTATTAGGTCTAGTCT 59.163 38.462 11.06 0.00 32.84 3.24
6403 8079 9.189156 TCTTTAGCTATTTTATGCCATGAAAGT 57.811 29.630 0.00 0.00 0.00 2.66
6525 8201 0.713883 GTACTTCGGTGACATGTGCG 59.286 55.000 1.15 0.00 0.00 5.34
6530 8206 1.226101 CGGTGACATGTGCGAATGC 60.226 57.895 1.15 0.00 43.20 3.56
6601 8277 2.027073 GTTGTCTGGTCGCATGCGA 61.027 57.895 37.21 37.21 46.87 5.10
6769 8445 5.590259 GCACTGCTTAATCAGGATCCTTTTA 59.410 40.000 13.00 10.53 38.36 1.52
6770 8446 6.095440 GCACTGCTTAATCAGGATCCTTTTAA 59.905 38.462 13.00 17.03 38.36 1.52
6910 8586 4.330250 CCCAGTCTCAGTTTCATGACATT 58.670 43.478 0.00 0.00 32.41 2.71
6921 8597 9.234827 TCAGTTTCATGACATTGAATCACTAAT 57.765 29.630 4.72 0.00 35.64 1.73
7023 8699 2.285083 TCCGGTAATTCAATGCTTCCG 58.715 47.619 0.00 0.00 36.85 4.30
7049 8725 7.005709 TCCTTCTTAGCTAAGCTGTACTTTT 57.994 36.000 25.83 0.00 40.10 2.27
7223 8903 4.996122 TCCGGTTTTATTTAGCTCGTTTCA 59.004 37.500 0.00 0.00 0.00 2.69
7227 8907 6.183360 CGGTTTTATTTAGCTCGTTTCAGGAT 60.183 38.462 0.00 0.00 0.00 3.24
7279 8959 2.364632 CATGTGGCTGACCCGAAATTA 58.635 47.619 0.00 0.00 35.87 1.40
7339 9019 4.958581 TCTGAGATTGTCCAAGATCTAGCA 59.041 41.667 0.00 0.00 32.96 3.49
7421 9101 2.894240 ATATCGAACGTTGGCGGCGT 62.894 55.000 5.00 0.36 45.07 5.68
7462 9142 5.819379 TCAGATGAAACATCTAGCACATTCC 59.181 40.000 12.84 0.00 0.00 3.01
7535 9215 2.224843 TGCTGATTTGGAGCCAGAAAGA 60.225 45.455 0.00 0.00 35.43 2.52
7536 9216 2.821969 GCTGATTTGGAGCCAGAAAGAA 59.178 45.455 0.00 0.00 0.00 2.52
7537 9217 3.256631 GCTGATTTGGAGCCAGAAAGAAA 59.743 43.478 0.00 0.00 0.00 2.52
7538 9218 4.617762 GCTGATTTGGAGCCAGAAAGAAAG 60.618 45.833 0.00 0.00 0.00 2.62
7559 9239 1.614226 GGTAGTGGTACAGCCCCCA 60.614 63.158 0.00 0.00 41.80 4.96
7563 9243 0.783850 AGTGGTACAGCCCCCATTTT 59.216 50.000 0.00 0.00 41.80 1.82
7580 9260 3.950861 TTGGGAGGGAGGAGGGCAG 62.951 68.421 0.00 0.00 0.00 4.85
7668 9350 6.159222 TGAGGTGTATCTCTAGTAACCACCTA 59.841 42.308 17.52 8.68 40.20 3.08
7669 9351 6.603224 AGGTGTATCTCTAGTAACCACCTAG 58.397 44.000 16.61 0.00 38.58 3.02
7670 9352 6.389278 AGGTGTATCTCTAGTAACCACCTAGA 59.611 42.308 16.61 0.00 38.58 2.43
7839 9533 4.090090 ACTGCTGTTGTAGTCTGGTAGAT 58.910 43.478 0.00 0.00 33.95 1.98
7895 9589 1.929836 CATGCAGGCGTTCTCTTCTAC 59.070 52.381 0.00 0.00 0.00 2.59
7897 9591 2.443416 TGCAGGCGTTCTCTTCTACTA 58.557 47.619 0.00 0.00 0.00 1.82
7898 9592 2.163815 TGCAGGCGTTCTCTTCTACTAC 59.836 50.000 0.00 0.00 0.00 2.73
7899 9593 2.163815 GCAGGCGTTCTCTTCTACTACA 59.836 50.000 0.00 0.00 0.00 2.74
7901 9595 4.036498 GCAGGCGTTCTCTTCTACTACATA 59.964 45.833 0.00 0.00 0.00 2.29
7904 9598 6.638873 CAGGCGTTCTCTTCTACTACATATTG 59.361 42.308 0.00 0.00 0.00 1.90
7905 9599 6.546403 AGGCGTTCTCTTCTACTACATATTGA 59.454 38.462 0.00 0.00 0.00 2.57
7906 9600 6.637658 GGCGTTCTCTTCTACTACATATTGAC 59.362 42.308 0.00 0.00 0.00 3.18
7908 9602 7.166142 GCGTTCTCTTCTACTACATATTGACAC 59.834 40.741 0.00 0.00 0.00 3.67
7910 9604 9.291664 GTTCTCTTCTACTACATATTGACACAC 57.708 37.037 0.00 0.00 0.00 3.82
7969 9790 5.276395 CGGACAATTAGTAAGAGTTCATGCG 60.276 44.000 0.00 0.00 0.00 4.73
7970 9791 5.810587 GGACAATTAGTAAGAGTTCATGCGA 59.189 40.000 0.00 0.00 0.00 5.10
7971 9792 6.312918 GGACAATTAGTAAGAGTTCATGCGAA 59.687 38.462 0.00 0.00 0.00 4.70
7972 9793 7.148474 GGACAATTAGTAAGAGTTCATGCGAAA 60.148 37.037 0.00 0.00 31.43 3.46
7973 9794 7.743104 ACAATTAGTAAGAGTTCATGCGAAAG 58.257 34.615 0.00 0.00 31.43 2.62
7974 9795 7.387948 ACAATTAGTAAGAGTTCATGCGAAAGT 59.612 33.333 0.00 0.00 31.43 2.66
7975 9796 6.706055 TTAGTAAGAGTTCATGCGAAAGTG 57.294 37.500 0.00 0.00 31.43 3.16
7976 9797 2.977405 AAGAGTTCATGCGAAAGTGC 57.023 45.000 0.00 0.00 31.43 4.40
7977 9798 2.175878 AGAGTTCATGCGAAAGTGCT 57.824 45.000 0.00 0.00 35.36 4.40
7978 9799 3.319137 AGAGTTCATGCGAAAGTGCTA 57.681 42.857 0.00 0.00 35.36 3.49
7979 9800 2.996621 AGAGTTCATGCGAAAGTGCTAC 59.003 45.455 0.00 0.00 35.36 3.58
7980 9801 2.996621 GAGTTCATGCGAAAGTGCTACT 59.003 45.455 0.00 0.00 35.36 2.57
7981 9802 2.738846 AGTTCATGCGAAAGTGCTACTG 59.261 45.455 0.00 0.00 35.36 2.74
7982 9803 2.455674 TCATGCGAAAGTGCTACTGT 57.544 45.000 0.00 0.00 35.36 3.55
7983 9804 2.068519 TCATGCGAAAGTGCTACTGTG 58.931 47.619 0.00 0.00 35.36 3.66
7984 9805 2.068519 CATGCGAAAGTGCTACTGTGA 58.931 47.619 0.00 0.00 35.36 3.58
7985 9806 1.783284 TGCGAAAGTGCTACTGTGAG 58.217 50.000 0.00 0.00 35.36 3.51
7986 9807 0.440371 GCGAAAGTGCTACTGTGAGC 59.560 55.000 0.00 0.00 43.16 4.26
8007 9828 4.601019 GCATTATGCGAAAGTGCTATTGT 58.399 39.130 0.00 0.00 31.71 2.71
8008 9829 4.438797 GCATTATGCGAAAGTGCTATTGTG 59.561 41.667 0.00 0.00 31.71 3.33
8009 9830 5.730289 GCATTATGCGAAAGTGCTATTGTGA 60.730 40.000 0.00 0.00 31.71 3.58
8010 9831 5.469373 TTATGCGAAAGTGCTATTGTGAG 57.531 39.130 0.00 0.00 35.36 3.51
8011 9832 1.464608 TGCGAAAGTGCTATTGTGAGC 59.535 47.619 0.00 0.00 43.16 4.26
8029 9850 2.199291 GCATTAAGCTCACATGCACC 57.801 50.000 16.14 0.00 42.49 5.01
8030 9851 1.202336 GCATTAAGCTCACATGCACCC 60.202 52.381 16.14 0.00 42.49 4.61
8031 9852 2.372264 CATTAAGCTCACATGCACCCT 58.628 47.619 0.00 0.00 34.99 4.34
8032 9853 2.584835 TTAAGCTCACATGCACCCTT 57.415 45.000 0.00 0.00 34.99 3.95
8033 9854 2.584835 TAAGCTCACATGCACCCTTT 57.415 45.000 0.00 0.00 34.99 3.11
8034 9855 0.963962 AAGCTCACATGCACCCTTTG 59.036 50.000 0.00 0.00 34.99 2.77
8049 9870 6.325919 CACCCTTTGCTACAGTAAAATTCA 57.674 37.500 0.00 0.00 0.00 2.57
8050 9871 6.924111 CACCCTTTGCTACAGTAAAATTCAT 58.076 36.000 0.00 0.00 0.00 2.57
8051 9872 7.378181 CACCCTTTGCTACAGTAAAATTCATT 58.622 34.615 0.00 0.00 0.00 2.57
8052 9873 7.872483 CACCCTTTGCTACAGTAAAATTCATTT 59.128 33.333 0.00 0.00 34.92 2.32
8053 9874 8.428852 ACCCTTTGCTACAGTAAAATTCATTTT 58.571 29.630 3.13 3.13 42.21 1.82
8054 9875 9.271828 CCCTTTGCTACAGTAAAATTCATTTTT 57.728 29.630 2.91 0.00 40.24 1.94
8107 9928 3.684103 GTCAACAAACATTGACGGTCA 57.316 42.857 6.76 6.76 46.55 4.02
8108 9929 3.359654 GTCAACAAACATTGACGGTCAC 58.640 45.455 10.97 0.00 46.55 3.67
8109 9930 4.083414 GTCAACAAACATTGACGGTCACG 61.083 47.826 10.97 7.73 46.55 4.35
8110 9931 0.941542 ACAAACATTGACGGTCACGG 59.058 50.000 10.97 8.42 46.48 4.94
8137 9958 6.917217 AAAAACAAAATCGATGCTCCAAAA 57.083 29.167 0.00 0.00 0.00 2.44
8138 9959 7.495135 AAAAACAAAATCGATGCTCCAAAAT 57.505 28.000 0.00 0.00 0.00 1.82
8139 9960 8.600449 AAAAACAAAATCGATGCTCCAAAATA 57.400 26.923 0.00 0.00 0.00 1.40
8140 9961 7.581011 AAACAAAATCGATGCTCCAAAATAC 57.419 32.000 0.00 0.00 0.00 1.89
8141 9962 6.515272 ACAAAATCGATGCTCCAAAATACT 57.485 33.333 0.00 0.00 0.00 2.12
8142 9963 6.924111 ACAAAATCGATGCTCCAAAATACTT 58.076 32.000 0.00 0.00 0.00 2.24
8143 9964 7.378181 ACAAAATCGATGCTCCAAAATACTTT 58.622 30.769 0.00 0.00 0.00 2.66
8144 9965 7.542130 ACAAAATCGATGCTCCAAAATACTTTC 59.458 33.333 0.00 0.00 0.00 2.62
8145 9966 6.757897 AATCGATGCTCCAAAATACTTTCA 57.242 33.333 0.00 0.00 0.00 2.69
8146 9967 6.757897 ATCGATGCTCCAAAATACTTTCAA 57.242 33.333 0.00 0.00 0.00 2.69
8147 9968 6.567687 TCGATGCTCCAAAATACTTTCAAA 57.432 33.333 0.00 0.00 0.00 2.69
8148 9969 6.976088 TCGATGCTCCAAAATACTTTCAAAA 58.024 32.000 0.00 0.00 0.00 2.44
8149 9970 7.429633 TCGATGCTCCAAAATACTTTCAAAAA 58.570 30.769 0.00 0.00 0.00 1.94
8150 9971 7.381139 TCGATGCTCCAAAATACTTTCAAAAAC 59.619 33.333 0.00 0.00 0.00 2.43
8151 9972 7.168972 CGATGCTCCAAAATACTTTCAAAAACA 59.831 33.333 0.00 0.00 0.00 2.83
8152 9973 8.907222 ATGCTCCAAAATACTTTCAAAAACAT 57.093 26.923 0.00 0.00 0.00 2.71
8153 9974 8.729805 TGCTCCAAAATACTTTCAAAAACATT 57.270 26.923 0.00 0.00 0.00 2.71
8154 9975 9.171877 TGCTCCAAAATACTTTCAAAAACATTT 57.828 25.926 0.00 0.00 0.00 2.32
8202 10023 9.664332 TTTTTCTCTCCAAAAATTGTCATTTCA 57.336 25.926 0.00 0.00 31.65 2.69
8203 10024 9.835389 TTTTCTCTCCAAAAATTGTCATTTCAT 57.165 25.926 0.00 0.00 30.80 2.57
8204 10025 9.480053 TTTCTCTCCAAAAATTGTCATTTCATC 57.520 29.630 0.00 0.00 30.80 2.92
8205 10026 8.180706 TCTCTCCAAAAATTGTCATTTCATCA 57.819 30.769 0.00 0.00 30.80 3.07
8206 10027 8.084073 TCTCTCCAAAAATTGTCATTTCATCAC 58.916 33.333 0.00 0.00 30.80 3.06
8207 10028 7.724287 TCTCCAAAAATTGTCATTTCATCACA 58.276 30.769 0.00 0.00 30.80 3.58
8208 10029 8.202811 TCTCCAAAAATTGTCATTTCATCACAA 58.797 29.630 0.00 0.00 30.80 3.33
8209 10030 8.905660 TCCAAAAATTGTCATTTCATCACAAT 57.094 26.923 0.00 0.00 41.50 2.71
8238 10059 7.820044 TTTTTGCGAACTCAAAAACTTGTAT 57.180 28.000 10.12 0.00 45.50 2.29
8239 10060 7.820044 TTTTGCGAACTCAAAAACTTGTATT 57.180 28.000 1.12 0.00 41.37 1.89
8240 10061 8.912787 TTTTGCGAACTCAAAAACTTGTATTA 57.087 26.923 1.12 0.00 41.37 0.98
8241 10062 7.901874 TTGCGAACTCAAAAACTTGTATTAC 57.098 32.000 0.00 0.00 0.00 1.89
8242 10063 7.254227 TGCGAACTCAAAAACTTGTATTACT 57.746 32.000 0.00 0.00 0.00 2.24
8243 10064 7.349711 TGCGAACTCAAAAACTTGTATTACTC 58.650 34.615 0.00 0.00 0.00 2.59
8244 10065 7.011576 TGCGAACTCAAAAACTTGTATTACTCA 59.988 33.333 0.00 0.00 0.00 3.41
8245 10066 7.853929 GCGAACTCAAAAACTTGTATTACTCAA 59.146 33.333 0.00 0.00 0.00 3.02
8246 10067 9.878599 CGAACTCAAAAACTTGTATTACTCAAT 57.121 29.630 0.00 0.00 0.00 2.57
8249 10070 8.793592 ACTCAAAAACTTGTATTACTCAATCCC 58.206 33.333 0.00 0.00 0.00 3.85
8250 10071 8.698973 TCAAAAACTTGTATTACTCAATCCCA 57.301 30.769 0.00 0.00 0.00 4.37
8251 10072 8.792633 TCAAAAACTTGTATTACTCAATCCCAG 58.207 33.333 0.00 0.00 0.00 4.45
8252 10073 8.576442 CAAAAACTTGTATTACTCAATCCCAGT 58.424 33.333 0.00 0.00 0.00 4.00
8253 10074 9.802039 AAAAACTTGTATTACTCAATCCCAGTA 57.198 29.630 0.00 0.00 0.00 2.74
8254 10075 9.975218 AAAACTTGTATTACTCAATCCCAGTAT 57.025 29.630 0.00 0.00 0.00 2.12
8255 10076 9.614792 AAACTTGTATTACTCAATCCCAGTATC 57.385 33.333 0.00 0.00 0.00 2.24
8256 10077 8.319057 ACTTGTATTACTCAATCCCAGTATCA 57.681 34.615 0.00 0.00 0.00 2.15
8257 10078 8.768397 ACTTGTATTACTCAATCCCAGTATCAA 58.232 33.333 0.00 0.00 0.00 2.57
8258 10079 9.784531 CTTGTATTACTCAATCCCAGTATCAAT 57.215 33.333 0.00 0.00 0.00 2.57
8264 10085 9.778741 TTACTCAATCCCAGTATCAATACAATC 57.221 33.333 3.18 0.00 35.74 2.67
8265 10086 7.227156 ACTCAATCCCAGTATCAATACAATCC 58.773 38.462 3.18 0.00 35.74 3.01
8266 10087 7.072961 ACTCAATCCCAGTATCAATACAATCCT 59.927 37.037 3.18 0.00 35.74 3.24
8267 10088 7.453393 TCAATCCCAGTATCAATACAATCCTC 58.547 38.462 3.18 0.00 35.74 3.71
8268 10089 7.072328 TCAATCCCAGTATCAATACAATCCTCA 59.928 37.037 3.18 0.00 35.74 3.86
8269 10090 6.425210 TCCCAGTATCAATACAATCCTCAG 57.575 41.667 3.18 0.00 35.74 3.35
8270 10091 4.999950 CCCAGTATCAATACAATCCTCAGC 59.000 45.833 3.18 0.00 35.74 4.26
8271 10092 5.455183 CCCAGTATCAATACAATCCTCAGCA 60.455 44.000 3.18 0.00 35.74 4.41
8272 10093 6.057533 CCAGTATCAATACAATCCTCAGCAA 58.942 40.000 3.18 0.00 35.74 3.91
8273 10094 6.017605 CCAGTATCAATACAATCCTCAGCAAC 60.018 42.308 3.18 0.00 35.74 4.17
8274 10095 6.765036 CAGTATCAATACAATCCTCAGCAACT 59.235 38.462 3.18 0.00 35.74 3.16
8275 10096 7.928167 CAGTATCAATACAATCCTCAGCAACTA 59.072 37.037 3.18 0.00 35.74 2.24
8276 10097 7.928706 AGTATCAATACAATCCTCAGCAACTAC 59.071 37.037 3.18 0.00 35.74 2.73
8277 10098 5.428253 TCAATACAATCCTCAGCAACTACC 58.572 41.667 0.00 0.00 0.00 3.18
8278 10099 5.189736 TCAATACAATCCTCAGCAACTACCT 59.810 40.000 0.00 0.00 0.00 3.08
8279 10100 3.618690 ACAATCCTCAGCAACTACCTC 57.381 47.619 0.00 0.00 0.00 3.85
8280 10101 2.237392 ACAATCCTCAGCAACTACCTCC 59.763 50.000 0.00 0.00 0.00 4.30
8281 10102 2.237143 CAATCCTCAGCAACTACCTCCA 59.763 50.000 0.00 0.00 0.00 3.86
8282 10103 2.024176 TCCTCAGCAACTACCTCCAA 57.976 50.000 0.00 0.00 0.00 3.53
8283 10104 2.334977 TCCTCAGCAACTACCTCCAAA 58.665 47.619 0.00 0.00 0.00 3.28
8284 10105 2.708861 TCCTCAGCAACTACCTCCAAAA 59.291 45.455 0.00 0.00 0.00 2.44
8285 10106 2.814336 CCTCAGCAACTACCTCCAAAAC 59.186 50.000 0.00 0.00 0.00 2.43
8286 10107 3.496870 CCTCAGCAACTACCTCCAAAACT 60.497 47.826 0.00 0.00 0.00 2.66
8287 10108 4.137543 CTCAGCAACTACCTCCAAAACTT 58.862 43.478 0.00 0.00 0.00 2.66
8288 10109 4.134563 TCAGCAACTACCTCCAAAACTTC 58.865 43.478 0.00 0.00 0.00 3.01
8289 10110 3.882888 CAGCAACTACCTCCAAAACTTCA 59.117 43.478 0.00 0.00 0.00 3.02
8290 10111 4.023707 CAGCAACTACCTCCAAAACTTCAG 60.024 45.833 0.00 0.00 0.00 3.02
8291 10112 3.253432 GCAACTACCTCCAAAACTTCAGG 59.747 47.826 0.00 0.00 0.00 3.86
8292 10113 4.714632 CAACTACCTCCAAAACTTCAGGA 58.285 43.478 0.00 0.00 0.00 3.86
8293 10114 4.625607 ACTACCTCCAAAACTTCAGGAG 57.374 45.455 0.00 0.00 46.71 3.69
8297 10118 2.784347 CTCCAAAACTTCAGGAGGACC 58.216 52.381 0.00 0.00 44.10 4.46
8307 10128 3.713867 AGGAGGACCTGACCCTAAC 57.286 57.895 0.00 0.00 45.92 2.34
8308 10129 0.042881 AGGAGGACCTGACCCTAACC 59.957 60.000 0.00 0.00 45.92 2.85
8309 10130 0.252558 GGAGGACCTGACCCTAACCA 60.253 60.000 0.00 0.00 33.36 3.67
8310 10131 1.652947 GAGGACCTGACCCTAACCAA 58.347 55.000 0.00 0.00 33.36 3.67
8311 10132 1.555533 GAGGACCTGACCCTAACCAAG 59.444 57.143 0.00 0.00 33.36 3.61
8312 10133 1.132495 AGGACCTGACCCTAACCAAGT 60.132 52.381 0.00 0.00 30.92 3.16
8313 10134 1.278413 GGACCTGACCCTAACCAAGTC 59.722 57.143 0.00 0.00 0.00 3.01
8314 10135 1.975680 GACCTGACCCTAACCAAGTCA 59.024 52.381 0.00 0.00 38.17 3.41
8315 10136 2.572104 GACCTGACCCTAACCAAGTCAT 59.428 50.000 0.00 0.00 39.64 3.06
8316 10137 3.773119 GACCTGACCCTAACCAAGTCATA 59.227 47.826 0.00 0.00 39.64 2.15
8317 10138 3.775316 ACCTGACCCTAACCAAGTCATAG 59.225 47.826 0.00 0.00 39.64 2.23
8318 10139 3.775316 CCTGACCCTAACCAAGTCATAGT 59.225 47.826 0.00 0.00 39.64 2.12
8319 10140 4.960469 CCTGACCCTAACCAAGTCATAGTA 59.040 45.833 0.00 0.00 39.64 1.82
8320 10141 5.163437 CCTGACCCTAACCAAGTCATAGTAC 60.163 48.000 0.00 0.00 39.64 2.73
8321 10142 4.400251 TGACCCTAACCAAGTCATAGTACG 59.600 45.833 0.00 0.00 35.67 3.67
8322 10143 4.603131 ACCCTAACCAAGTCATAGTACGA 58.397 43.478 0.00 0.00 0.00 3.43
8323 10144 5.206587 ACCCTAACCAAGTCATAGTACGAT 58.793 41.667 0.00 0.00 0.00 3.73
8324 10145 5.659971 ACCCTAACCAAGTCATAGTACGATT 59.340 40.000 0.00 0.00 0.00 3.34
8325 10146 6.835488 ACCCTAACCAAGTCATAGTACGATTA 59.165 38.462 0.00 0.00 0.00 1.75
8326 10147 7.508296 ACCCTAACCAAGTCATAGTACGATTAT 59.492 37.037 0.00 0.00 0.00 1.28
8327 10148 8.365647 CCCTAACCAAGTCATAGTACGATTATT 58.634 37.037 0.00 0.00 0.00 1.40
8332 10153 9.962783 ACCAAGTCATAGTACGATTATTAGAAC 57.037 33.333 0.00 0.00 0.00 3.01
8333 10154 9.114965 CCAAGTCATAGTACGATTATTAGAACG 57.885 37.037 0.00 0.00 0.00 3.95
8334 10155 9.874215 CAAGTCATAGTACGATTATTAGAACGA 57.126 33.333 0.00 0.00 0.00 3.85
8335 10156 9.875675 AAGTCATAGTACGATTATTAGAACGAC 57.124 33.333 0.00 0.00 0.00 4.34
8336 10157 8.502387 AGTCATAGTACGATTATTAGAACGACC 58.498 37.037 0.00 0.00 0.00 4.79
8337 10158 8.285394 GTCATAGTACGATTATTAGAACGACCA 58.715 37.037 0.00 0.00 0.00 4.02
8338 10159 8.839343 TCATAGTACGATTATTAGAACGACCAA 58.161 33.333 0.00 0.00 0.00 3.67
8339 10160 9.454585 CATAGTACGATTATTAGAACGACCAAA 57.545 33.333 0.00 0.00 0.00 3.28
8341 10162 8.937634 AGTACGATTATTAGAACGACCAAAAT 57.062 30.769 0.00 0.00 0.00 1.82
8344 10165 7.834529 ACGATTATTAGAACGACCAAAATACG 58.165 34.615 0.00 0.00 0.00 3.06
8345 10166 6.784227 CGATTATTAGAACGACCAAAATACGC 59.216 38.462 0.00 0.00 0.00 4.42
8346 10167 7.306399 CGATTATTAGAACGACCAAAATACGCT 60.306 37.037 0.00 0.00 0.00 5.07
8347 10168 8.876275 ATTATTAGAACGACCAAAATACGCTA 57.124 30.769 0.00 0.00 0.00 4.26
8348 10169 6.823678 ATTAGAACGACCAAAATACGCTAG 57.176 37.500 0.00 0.00 0.00 3.42
8349 10170 2.928116 AGAACGACCAAAATACGCTAGC 59.072 45.455 4.06 4.06 0.00 3.42
8350 10171 2.667473 ACGACCAAAATACGCTAGCT 57.333 45.000 13.93 2.46 0.00 3.32
8351 10172 2.968675 ACGACCAAAATACGCTAGCTT 58.031 42.857 13.93 5.97 0.00 3.74
8352 10173 4.114058 ACGACCAAAATACGCTAGCTTA 57.886 40.909 13.93 8.45 0.00 3.09
8353 10174 4.690122 ACGACCAAAATACGCTAGCTTAT 58.310 39.130 13.93 10.69 0.00 1.73
8354 10175 4.743644 ACGACCAAAATACGCTAGCTTATC 59.256 41.667 13.58 1.41 0.00 1.75
8355 10176 4.743151 CGACCAAAATACGCTAGCTTATCA 59.257 41.667 13.58 0.00 0.00 2.15
8356 10177 5.332355 CGACCAAAATACGCTAGCTTATCAC 60.332 44.000 13.58 2.96 0.00 3.06
8357 10178 5.671493 ACCAAAATACGCTAGCTTATCACT 58.329 37.500 13.58 0.00 0.00 3.41
8358 10179 5.753921 ACCAAAATACGCTAGCTTATCACTC 59.246 40.000 13.58 0.00 0.00 3.51
8359 10180 5.107837 CCAAAATACGCTAGCTTATCACTCG 60.108 44.000 13.58 0.00 0.00 4.18
8360 10181 2.682952 TACGCTAGCTTATCACTCGC 57.317 50.000 13.93 0.00 0.00 5.03
8361 10182 0.030908 ACGCTAGCTTATCACTCGCC 59.969 55.000 13.93 0.00 0.00 5.54
8362 10183 0.312416 CGCTAGCTTATCACTCGCCT 59.688 55.000 13.93 0.00 0.00 5.52
8363 10184 1.269309 CGCTAGCTTATCACTCGCCTT 60.269 52.381 13.93 0.00 0.00 4.35
8364 10185 2.031069 CGCTAGCTTATCACTCGCCTTA 60.031 50.000 13.93 0.00 0.00 2.69
8365 10186 3.366476 CGCTAGCTTATCACTCGCCTTAT 60.366 47.826 13.93 0.00 0.00 1.73
8366 10187 4.561105 GCTAGCTTATCACTCGCCTTATT 58.439 43.478 7.70 0.00 0.00 1.40
8367 10188 4.623595 GCTAGCTTATCACTCGCCTTATTC 59.376 45.833 7.70 0.00 0.00 1.75
8368 10189 4.946478 AGCTTATCACTCGCCTTATTCT 57.054 40.909 0.00 0.00 0.00 2.40
8369 10190 4.626042 AGCTTATCACTCGCCTTATTCTG 58.374 43.478 0.00 0.00 0.00 3.02
8370 10191 4.100189 AGCTTATCACTCGCCTTATTCTGT 59.900 41.667 0.00 0.00 0.00 3.41
8371 10192 4.210120 GCTTATCACTCGCCTTATTCTGTG 59.790 45.833 0.00 0.00 0.00 3.66
8372 10193 5.592054 CTTATCACTCGCCTTATTCTGTGA 58.408 41.667 0.00 0.00 38.52 3.58
8373 10194 3.953712 TCACTCGCCTTATTCTGTGAA 57.046 42.857 0.00 0.00 32.50 3.18
8374 10195 3.585862 TCACTCGCCTTATTCTGTGAAC 58.414 45.455 0.00 0.00 32.50 3.18
8375 10196 2.345641 CACTCGCCTTATTCTGTGAACG 59.654 50.000 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.164338 GGTCATTTTCCCGCAAAGGTA 58.836 47.619 0.00 0.00 38.74 3.08
28 29 1.161843 TTCTTCGGTCATTTTCCCGC 58.838 50.000 0.00 0.00 43.87 6.13
38 39 7.813148 TCGAAATCAGGATATAATTCTTCGGTC 59.187 37.037 9.01 0.00 0.00 4.79
41 42 7.201478 GGCTCGAAATCAGGATATAATTCTTCG 60.201 40.741 0.00 0.00 0.00 3.79
44 45 7.009179 TGGCTCGAAATCAGGATATAATTCT 57.991 36.000 0.00 0.00 0.00 2.40
51 52 3.904800 TGTTGGCTCGAAATCAGGATA 57.095 42.857 0.00 0.00 0.00 2.59
63 64 6.569179 TTCCTTGTTTACTATTGTTGGCTC 57.431 37.500 0.00 0.00 0.00 4.70
75 76 6.077838 CGTTTGTCTATGCTTCCTTGTTTAC 58.922 40.000 0.00 0.00 0.00 2.01
84 85 2.695359 TGTCCCGTTTGTCTATGCTTC 58.305 47.619 0.00 0.00 0.00 3.86
87 88 3.270877 AGATTGTCCCGTTTGTCTATGC 58.729 45.455 0.00 0.00 0.00 3.14
89 90 5.163437 GGAGTAGATTGTCCCGTTTGTCTAT 60.163 44.000 0.00 0.00 0.00 1.98
129 130 1.125021 GCCATCGTCATATTTCGCTCG 59.875 52.381 0.00 0.00 0.00 5.03
168 169 3.410541 TCCGTTGGAGGATTGGGG 58.589 61.111 0.00 0.00 34.92 4.96
242 244 3.202906 TGGGATTTTTATTCTCGCGAGG 58.797 45.455 33.98 16.82 0.00 4.63
268 270 2.023414 ATTTGCATCTGGGCATGGCG 62.023 55.000 13.76 0.00 44.48 5.69
301 304 2.680965 GGGAAAGGCGAATGGGGA 59.319 61.111 0.00 0.00 0.00 4.81
302 305 2.442087 GGGGAAAGGCGAATGGGG 60.442 66.667 0.00 0.00 0.00 4.96
745 956 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
746 957 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
747 958 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
748 959 4.023279 CGAGAGAGAGAGAGAGAGAGAGAG 60.023 54.167 0.00 0.00 0.00 3.20
749 960 3.885901 CGAGAGAGAGAGAGAGAGAGAGA 59.114 52.174 0.00 0.00 0.00 3.10
750 961 3.005261 CCGAGAGAGAGAGAGAGAGAGAG 59.995 56.522 0.00 0.00 0.00 3.20
751 962 2.959030 CCGAGAGAGAGAGAGAGAGAGA 59.041 54.545 0.00 0.00 0.00 3.10
752 963 2.036475 CCCGAGAGAGAGAGAGAGAGAG 59.964 59.091 0.00 0.00 0.00 3.20
753 964 2.039418 CCCGAGAGAGAGAGAGAGAGA 58.961 57.143 0.00 0.00 0.00 3.10
754 965 2.039418 TCCCGAGAGAGAGAGAGAGAG 58.961 57.143 0.00 0.00 0.00 3.20
755 966 1.760613 GTCCCGAGAGAGAGAGAGAGA 59.239 57.143 0.00 0.00 0.00 3.10
756 967 1.762957 AGTCCCGAGAGAGAGAGAGAG 59.237 57.143 0.00 0.00 0.00 3.20
757 968 1.760613 GAGTCCCGAGAGAGAGAGAGA 59.239 57.143 0.00 0.00 0.00 3.10
758 969 1.202651 GGAGTCCCGAGAGAGAGAGAG 60.203 61.905 0.00 0.00 0.00 3.20
759 970 0.834612 GGAGTCCCGAGAGAGAGAGA 59.165 60.000 0.00 0.00 0.00 3.10
760 971 0.837272 AGGAGTCCCGAGAGAGAGAG 59.163 60.000 5.25 0.00 37.58 3.20
761 972 0.834612 GAGGAGTCCCGAGAGAGAGA 59.165 60.000 5.25 0.00 37.58 3.10
762 973 0.179029 GGAGGAGTCCCGAGAGAGAG 60.179 65.000 5.25 0.00 36.76 3.20
763 974 1.916738 GGAGGAGTCCCGAGAGAGA 59.083 63.158 5.25 0.00 36.76 3.10
764 975 4.571243 GGAGGAGTCCCGAGAGAG 57.429 66.667 5.25 0.00 36.76 3.20
772 983 0.325765 AGCTGTAAGGGGAGGAGTCC 60.326 60.000 0.00 0.00 43.05 3.85
773 984 2.033372 GTAGCTGTAAGGGGAGGAGTC 58.967 57.143 0.00 0.00 0.00 3.36
774 985 1.646977 AGTAGCTGTAAGGGGAGGAGT 59.353 52.381 0.00 0.00 0.00 3.85
775 986 2.463047 AGTAGCTGTAAGGGGAGGAG 57.537 55.000 0.00 0.00 0.00 3.69
776 987 3.128848 TCTAGTAGCTGTAAGGGGAGGA 58.871 50.000 0.00 0.00 0.00 3.71
777 988 3.596940 TCTAGTAGCTGTAAGGGGAGG 57.403 52.381 0.00 0.00 0.00 4.30
778 989 5.390387 AGAATCTAGTAGCTGTAAGGGGAG 58.610 45.833 0.00 0.00 0.00 4.30
779 990 5.405063 AGAATCTAGTAGCTGTAAGGGGA 57.595 43.478 0.00 0.00 0.00 4.81
833 1044 2.434336 AGACTTGGGGTTTTGCTTTTCC 59.566 45.455 0.00 0.00 0.00 3.13
854 1065 2.110188 AGAGGGAGAACTGACAGTGGTA 59.890 50.000 9.33 0.00 0.00 3.25
1168 1416 3.385384 TCAGCCAGAGCCACCGAG 61.385 66.667 0.00 0.00 41.25 4.63
1169 1417 3.695606 GTCAGCCAGAGCCACCGA 61.696 66.667 0.00 0.00 41.25 4.69
1171 1419 4.767255 CCGTCAGCCAGAGCCACC 62.767 72.222 0.00 0.00 41.25 4.61
1172 1420 2.527951 AATCCGTCAGCCAGAGCCAC 62.528 60.000 0.00 0.00 41.25 5.01
1173 1421 2.293318 AATCCGTCAGCCAGAGCCA 61.293 57.895 0.00 0.00 41.25 4.75
1174 1422 1.817099 CAATCCGTCAGCCAGAGCC 60.817 63.158 0.00 0.00 41.25 4.70
1175 1423 1.817099 CCAATCCGTCAGCCAGAGC 60.817 63.158 0.00 0.00 40.32 4.09
1176 1424 0.036010 AACCAATCCGTCAGCCAGAG 60.036 55.000 0.00 0.00 0.00 3.35
1177 1425 0.400213 AAACCAATCCGTCAGCCAGA 59.600 50.000 0.00 0.00 0.00 3.86
1178 1426 0.804989 GAAACCAATCCGTCAGCCAG 59.195 55.000 0.00 0.00 0.00 4.85
1179 1427 0.608035 GGAAACCAATCCGTCAGCCA 60.608 55.000 0.00 0.00 0.00 4.75
1180 1428 2.180674 GGAAACCAATCCGTCAGCC 58.819 57.895 0.00 0.00 0.00 4.85
1216 1464 0.029834 ACGAAGCAAAGCAAGCACAG 59.970 50.000 0.00 0.00 0.00 3.66
1248 1496 1.178534 CCCCCGAACAACTGCACAAT 61.179 55.000 0.00 0.00 0.00 2.71
1301 1562 4.825679 CACCTCCCCTCCCCTCCC 62.826 77.778 0.00 0.00 0.00 4.30
1302 1563 4.825679 CCACCTCCCCTCCCCTCC 62.826 77.778 0.00 0.00 0.00 4.30
1307 1568 1.632965 ATTAACGCCACCTCCCCTCC 61.633 60.000 0.00 0.00 0.00 4.30
1308 1569 0.255033 AATTAACGCCACCTCCCCTC 59.745 55.000 0.00 0.00 0.00 4.30
1309 1570 0.702316 AAATTAACGCCACCTCCCCT 59.298 50.000 0.00 0.00 0.00 4.79
1310 1571 1.100510 GAAATTAACGCCACCTCCCC 58.899 55.000 0.00 0.00 0.00 4.81
1311 1572 1.100510 GGAAATTAACGCCACCTCCC 58.899 55.000 0.00 0.00 0.00 4.30
1312 1573 1.828979 TGGAAATTAACGCCACCTCC 58.171 50.000 0.00 0.00 0.00 4.30
1313 1574 2.479560 GCATGGAAATTAACGCCACCTC 60.480 50.000 0.00 0.00 33.93 3.85
1314 1575 1.476488 GCATGGAAATTAACGCCACCT 59.524 47.619 0.00 0.00 33.93 4.00
1315 1576 1.203523 TGCATGGAAATTAACGCCACC 59.796 47.619 0.00 0.00 33.93 4.61
1316 1577 2.529151 CTGCATGGAAATTAACGCCAC 58.471 47.619 0.00 0.00 33.93 5.01
1317 1578 1.135141 GCTGCATGGAAATTAACGCCA 60.135 47.619 0.00 0.00 35.91 5.69
1337 1598 2.033141 CCCACTGGTGCCAGAGTG 59.967 66.667 23.55 13.23 46.30 3.51
1338 1599 2.448542 ACCCACTGGTGCCAGAGT 60.449 61.111 23.55 14.35 45.58 3.24
1392 1653 1.610522 GTCTGTTGCACCAAGCTGAAT 59.389 47.619 0.00 0.00 45.94 2.57
1407 1668 1.843376 CCACCCCTCACCTGTCTGT 60.843 63.158 0.00 0.00 0.00 3.41
1497 1758 7.410193 CGAATTGTCTGATATCATCACATCGTC 60.410 40.741 20.33 15.13 35.06 4.20
1573 1834 2.636647 TGTCACCACATTGCTTCAGA 57.363 45.000 0.00 0.00 0.00 3.27
1578 1839 2.555325 CAGAACATGTCACCACATTGCT 59.445 45.455 0.00 0.00 40.66 3.91
1622 1883 3.063997 CAGACACGTATCTTCCCAATTGC 59.936 47.826 0.00 0.00 0.00 3.56
1631 1892 4.258702 ACTGAAAGCAGACACGTATCTT 57.741 40.909 0.00 0.00 45.17 2.40
1672 1933 2.029918 ACGCCTTTCTCCTGCATTTTTC 60.030 45.455 0.00 0.00 0.00 2.29
1685 1946 0.598065 ACCAATCTTGCACGCCTTTC 59.402 50.000 0.00 0.00 0.00 2.62
1695 1956 5.310720 GGTAAGCAACCTAACCAATCTTG 57.689 43.478 1.14 0.00 45.75 3.02
1743 2004 1.004440 GACGAGGGACTGCAAGCTT 60.004 57.895 0.00 0.00 41.55 3.74
1744 2005 2.659610 GACGAGGGACTGCAAGCT 59.340 61.111 0.00 0.00 41.55 3.74
1803 2064 5.323900 CAGTTAGCCACATTTTACATCACG 58.676 41.667 0.00 0.00 0.00 4.35
1885 2146 4.072131 GCCAAATCAAGTACTTGGAGACA 58.928 43.478 30.35 14.81 41.88 3.41
2436 2700 8.217799 CCCTAGAAGTTATTAATTCACCCATGA 58.782 37.037 0.00 0.00 0.00 3.07
2882 3148 6.119240 TCATTGAGTGACCTGAGAAAAGAT 57.881 37.500 0.00 0.00 0.00 2.40
3057 3323 7.695055 TGAAGTTGTTGGAAGAAATATCCCTA 58.305 34.615 0.00 0.00 36.04 3.53
3117 3383 5.232610 AGACATACAGCGTAACTAGTGAC 57.767 43.478 0.00 0.00 0.00 3.67
3149 3415 7.404203 CAACAAGGAAAAATGCAAGAAAGAAG 58.596 34.615 0.00 0.00 0.00 2.85
3171 3437 9.529325 AGAAAATGTAAAAAGAAAGTAGCCAAC 57.471 29.630 0.00 0.00 0.00 3.77
3418 3691 8.896744 CAGTCAAATTGGATGTCTATACAATGT 58.103 33.333 0.00 0.00 45.14 2.71
3636 3947 5.091261 AGTGAGCTGTTCCTTATAACCAG 57.909 43.478 0.00 0.00 0.00 4.00
3663 3974 9.230932 GCTCAAATAAGAGATGCAAAATTACTC 57.769 33.333 0.00 0.00 37.87 2.59
3668 3979 5.659971 AGGGCTCAAATAAGAGATGCAAAAT 59.340 36.000 0.00 0.00 37.87 1.82
3780 4092 5.830991 TGGCTGGTTATTGTTTTGTAGAACT 59.169 36.000 0.00 0.00 0.00 3.01
3806 4118 3.186909 CTGCATTGCATGAAAGATGGTG 58.813 45.455 12.53 0.00 38.13 4.17
3893 4208 8.540492 CAAAAATCAAAGCTATCAATGATCTGC 58.460 33.333 0.00 6.04 31.58 4.26
3938 4253 8.620533 AGAAATAAATTATCAGAACAAAGCGC 57.379 30.769 0.00 0.00 0.00 5.92
4017 4332 6.815089 ACTTCAAATTTGGTATGTTGAGCAA 58.185 32.000 17.90 0.02 35.11 3.91
4057 4372 9.039870 GTAGAAGACATCAATAGACCTGAAATG 57.960 37.037 0.00 0.00 0.00 2.32
4067 4382 8.341173 GCAGGAAATTGTAGAAGACATCAATAG 58.659 37.037 0.00 0.00 38.07 1.73
4073 4388 5.564550 AGTGCAGGAAATTGTAGAAGACAT 58.435 37.500 0.00 0.00 38.07 3.06
4127 4475 8.477256 CCATCCTTTCTGCAGGAAAAATAATAA 58.523 33.333 15.13 0.00 46.50 1.40
4128 4476 7.069826 CCCATCCTTTCTGCAGGAAAAATAATA 59.930 37.037 15.13 0.00 46.50 0.98
4141 4489 0.039618 TGGGTTCCCATCCTTTCTGC 59.960 55.000 6.46 0.00 0.00 4.26
4201 4564 2.264794 GTGTAGGGCCTGTCGGTG 59.735 66.667 18.53 0.00 0.00 4.94
4202 4565 3.001406 GGTGTAGGGCCTGTCGGT 61.001 66.667 18.53 0.00 0.00 4.69
4203 4566 4.143333 CGGTGTAGGGCCTGTCGG 62.143 72.222 18.53 6.94 0.00 4.79
4204 4567 3.066190 TCGGTGTAGGGCCTGTCG 61.066 66.667 18.53 14.13 0.00 4.35
4205 4568 2.280552 TGTCGGTGTAGGGCCTGTC 61.281 63.158 18.53 10.01 0.00 3.51
4206 4569 2.203728 TGTCGGTGTAGGGCCTGT 60.204 61.111 18.53 0.00 0.00 4.00
4207 4570 2.107041 TTGTGTCGGTGTAGGGCCTG 62.107 60.000 18.53 0.00 0.00 4.85
4208 4571 1.412453 TTTGTGTCGGTGTAGGGCCT 61.412 55.000 12.58 12.58 0.00 5.19
4209 4572 1.071814 TTTGTGTCGGTGTAGGGCC 59.928 57.895 0.00 0.00 0.00 5.80
4210 4573 0.533308 TGTTTGTGTCGGTGTAGGGC 60.533 55.000 0.00 0.00 0.00 5.19
4211 4574 1.223187 GTGTTTGTGTCGGTGTAGGG 58.777 55.000 0.00 0.00 0.00 3.53
4212 4575 1.223187 GGTGTTTGTGTCGGTGTAGG 58.777 55.000 0.00 0.00 0.00 3.18
4213 4576 1.942677 TGGTGTTTGTGTCGGTGTAG 58.057 50.000 0.00 0.00 0.00 2.74
4214 4577 2.158943 TGATGGTGTTTGTGTCGGTGTA 60.159 45.455 0.00 0.00 0.00 2.90
4215 4578 1.305201 GATGGTGTTTGTGTCGGTGT 58.695 50.000 0.00 0.00 0.00 4.16
4378 4741 5.406175 ACAACAATTATGAACAGCACAATGC 59.594 36.000 0.00 0.00 45.46 3.56
4446 4809 9.154847 CTGACTTGTTGTATAATCATGTCTTGA 57.845 33.333 14.82 0.00 37.25 3.02
4447 4810 8.393366 CCTGACTTGTTGTATAATCATGTCTTG 58.607 37.037 14.82 10.66 37.25 3.02
4448 4811 8.103305 ACCTGACTTGTTGTATAATCATGTCTT 58.897 33.333 14.82 0.00 37.25 3.01
4526 4889 0.947180 TAACGTCGTTCCTTGGCTGC 60.947 55.000 15.06 0.00 0.00 5.25
4694 5057 8.362464 AGTGGTCAGATTTACAAGTATCTGTA 57.638 34.615 10.78 0.00 45.08 2.74
4695 5058 7.246171 AGTGGTCAGATTTACAAGTATCTGT 57.754 36.000 10.78 0.00 45.08 3.41
4696 5059 8.470805 ACTAGTGGTCAGATTTACAAGTATCTG 58.529 37.037 0.00 0.00 45.81 2.90
4697 5060 8.596781 ACTAGTGGTCAGATTTACAAGTATCT 57.403 34.615 0.00 0.00 0.00 1.98
4698 5061 9.303537 GAACTAGTGGTCAGATTTACAAGTATC 57.696 37.037 0.00 0.00 0.00 2.24
4699 5062 8.812972 TGAACTAGTGGTCAGATTTACAAGTAT 58.187 33.333 0.00 0.00 0.00 2.12
4796 5165 3.242867 TCTCTTTTCAGGAGGCTTCTCA 58.757 45.455 0.00 0.00 39.23 3.27
4912 5308 2.852075 GAGGTGGTGGTGGGGACA 60.852 66.667 0.00 0.00 38.70 4.02
4914 5310 4.194497 TGGAGGTGGTGGTGGGGA 62.194 66.667 0.00 0.00 0.00 4.81
4915 5311 3.966543 GTGGAGGTGGTGGTGGGG 61.967 72.222 0.00 0.00 0.00 4.96
4916 5312 3.966543 GGTGGAGGTGGTGGTGGG 61.967 72.222 0.00 0.00 0.00 4.61
4917 5313 4.329545 CGGTGGAGGTGGTGGTGG 62.330 72.222 0.00 0.00 0.00 4.61
4976 5372 8.275632 GGATTAACAATCACTTTTTCAACAAGC 58.724 33.333 1.66 0.00 39.71 4.01
5108 5504 9.388506 CTCTCTCTTATTAAATTTTCCTCTGCA 57.611 33.333 0.00 0.00 0.00 4.41
5139 5535 5.296151 TCTGCCAGATATACTTTTCCCAG 57.704 43.478 0.00 0.00 0.00 4.45
5218 5614 4.016444 TGAGGACACCATTTCAATAAGCC 58.984 43.478 0.00 0.00 0.00 4.35
5232 5628 7.172361 GCATAGGATAAAAGAAGATGAGGACAC 59.828 40.741 0.00 0.00 0.00 3.67
5245 5641 7.770897 ACTTCCAGTAACTGCATAGGATAAAAG 59.229 37.037 0.00 0.00 0.00 2.27
5563 5959 7.121168 CCCTGAACAAGCTAAACTAATCATTCA 59.879 37.037 0.00 0.00 0.00 2.57
5573 5969 1.541588 CAGCCCCTGAACAAGCTAAAC 59.458 52.381 0.00 0.00 33.33 2.01
5585 5981 2.077687 AAATATGAAGGCAGCCCCTG 57.922 50.000 8.22 0.00 45.62 4.45
5880 6276 5.687285 GCTTGACAAAACATACAGTTCCAAG 59.313 40.000 0.00 0.00 40.26 3.61
5904 6300 6.800072 AGACCAGGACTAAAGGATTAAGAG 57.200 41.667 0.00 0.00 0.00 2.85
6128 6524 7.153315 TCAGCAAATCATGTTTTCTGCATTTA 58.847 30.769 13.14 2.01 0.00 1.40
6131 6527 5.142061 TCAGCAAATCATGTTTTCTGCAT 57.858 34.783 13.14 0.35 0.00 3.96
6132 6528 4.587584 TCAGCAAATCATGTTTTCTGCA 57.412 36.364 13.14 0.00 0.00 4.41
6394 6790 8.436046 TTTTCTTTTCCAATTGACTTTCATGG 57.564 30.769 7.12 0.00 29.84 3.66
6601 8277 4.430908 GTGCCTCGTAATTTAGTAGTGCT 58.569 43.478 0.00 0.00 0.00 4.40
6769 8445 7.173047 GGAGGTGCATGATGTAAAAACATTTTT 59.827 33.333 0.00 7.44 42.51 1.94
6770 8446 6.650390 GGAGGTGCATGATGTAAAAACATTTT 59.350 34.615 0.00 0.00 0.00 1.82
6883 8559 0.606673 GAAACTGAGACTGGGCCCAC 60.607 60.000 24.45 13.29 0.00 4.61
6910 8586 7.494625 GGGTCAACGATCTTTATTAGTGATTCA 59.505 37.037 0.00 0.00 0.00 2.57
6921 8597 6.127535 ACGAATAGAAGGGTCAACGATCTTTA 60.128 38.462 0.00 0.00 0.00 1.85
6997 8673 6.377327 AAGCATTGAATTACCGGAATACAG 57.623 37.500 9.46 0.00 0.00 2.74
7023 8699 5.968254 AGTACAGCTTAGCTAAGAAGGAAC 58.032 41.667 32.88 23.00 36.40 3.62
7049 8725 7.553760 ACATATTGTATCATGTCTTGTGCTTCA 59.446 33.333 0.00 0.00 29.34 3.02
7223 8903 7.914859 TCATCTCATTATATTGCTGTCATCCT 58.085 34.615 0.00 0.00 0.00 3.24
7279 8959 0.392998 CTGGTTCCGGCTGCATAAGT 60.393 55.000 0.50 0.00 0.00 2.24
7339 9019 3.684788 CACCAGCAGCGTTTAAGATACTT 59.315 43.478 0.00 0.00 0.00 2.24
7535 9215 1.907255 GGCTGTACCACTACCTCCTTT 59.093 52.381 0.00 0.00 38.86 3.11
7536 9216 1.569653 GGCTGTACCACTACCTCCTT 58.430 55.000 0.00 0.00 38.86 3.36
7537 9217 0.325390 GGGCTGTACCACTACCTCCT 60.325 60.000 0.00 0.00 42.05 3.69
7538 9218 1.335882 GGGGCTGTACCACTACCTCC 61.336 65.000 0.00 0.00 39.64 4.30
7559 9239 1.584717 GCCCTCCTCCCTCCCAAAAT 61.585 60.000 0.00 0.00 0.00 1.82
7563 9243 4.421554 CTGCCCTCCTCCCTCCCA 62.422 72.222 0.00 0.00 0.00 4.37
7581 9261 2.046217 GGAGCAACGAGAACCCCC 60.046 66.667 0.00 0.00 0.00 5.40
7582 9262 2.046217 GGGAGCAACGAGAACCCC 60.046 66.667 0.00 0.00 35.00 4.95
7595 9277 1.341156 AAGGATCTTCTGCCCGGGAG 61.341 60.000 29.31 19.03 0.00 4.30
7705 9387 8.808529 CGAACATCACTAACTTCAAGGTAATAG 58.191 37.037 0.00 0.00 0.00 1.73
7803 9493 7.016361 ACAACAGCAGTAACAGTTCTAAAAG 57.984 36.000 0.00 0.00 0.00 2.27
7814 9504 3.991367 ACCAGACTACAACAGCAGTAAC 58.009 45.455 0.00 0.00 0.00 2.50
7818 9508 4.727507 ATCTACCAGACTACAACAGCAG 57.272 45.455 0.00 0.00 0.00 4.24
7839 9533 2.269520 ATTCGCCCCTGCACAGCATA 62.270 55.000 0.00 0.00 38.13 3.14
7895 9589 9.457110 GAGTAGAATCTGTGTGTCAATATGTAG 57.543 37.037 0.00 0.00 0.00 2.74
7897 9591 7.978414 CAGAGTAGAATCTGTGTGTCAATATGT 59.022 37.037 0.00 0.00 41.52 2.29
7898 9592 7.437565 CCAGAGTAGAATCTGTGTGTCAATATG 59.562 40.741 6.27 0.00 44.35 1.78
7899 9593 7.343057 TCCAGAGTAGAATCTGTGTGTCAATAT 59.657 37.037 6.27 0.00 44.35 1.28
7901 9595 5.481824 TCCAGAGTAGAATCTGTGTGTCAAT 59.518 40.000 6.27 0.00 44.35 2.57
7904 9598 4.142271 CCTCCAGAGTAGAATCTGTGTGTC 60.142 50.000 6.27 0.00 44.35 3.67
7905 9599 3.766591 CCTCCAGAGTAGAATCTGTGTGT 59.233 47.826 6.27 0.00 44.35 3.72
7906 9600 3.430098 GCCTCCAGAGTAGAATCTGTGTG 60.430 52.174 6.27 0.28 44.35 3.82
7908 9602 2.762887 TGCCTCCAGAGTAGAATCTGTG 59.237 50.000 6.27 0.00 44.35 3.66
7910 9604 4.478206 TTTGCCTCCAGAGTAGAATCTG 57.522 45.455 0.00 0.00 45.24 2.90
7952 9773 5.120208 GCACTTTCGCATGAACTCTTACTAA 59.880 40.000 0.00 0.00 32.71 2.24
7975 9796 2.473816 TCGCATAATGCTCACAGTAGC 58.526 47.619 0.00 0.00 42.25 3.58
7976 9797 4.568359 ACTTTCGCATAATGCTCACAGTAG 59.432 41.667 0.00 0.00 42.25 2.57
7977 9798 4.329801 CACTTTCGCATAATGCTCACAGTA 59.670 41.667 0.00 0.00 42.25 2.74
7978 9799 3.125829 CACTTTCGCATAATGCTCACAGT 59.874 43.478 0.00 0.00 42.25 3.55
7979 9800 3.677601 CACTTTCGCATAATGCTCACAG 58.322 45.455 0.00 0.00 42.25 3.66
7980 9801 2.159531 GCACTTTCGCATAATGCTCACA 60.160 45.455 0.00 0.00 42.25 3.58
7981 9802 2.096496 AGCACTTTCGCATAATGCTCAC 59.904 45.455 0.00 0.00 42.93 3.51
7982 9803 2.358957 AGCACTTTCGCATAATGCTCA 58.641 42.857 0.00 0.00 42.93 4.26
7983 9804 4.739046 ATAGCACTTTCGCATAATGCTC 57.261 40.909 0.00 0.00 42.93 4.26
7985 9806 4.438797 CACAATAGCACTTTCGCATAATGC 59.561 41.667 0.00 0.00 40.69 3.56
7986 9807 5.809464 TCACAATAGCACTTTCGCATAATG 58.191 37.500 0.00 0.00 0.00 1.90
7987 9808 5.504665 GCTCACAATAGCACTTTCGCATAAT 60.505 40.000 0.00 0.00 42.30 1.28
7988 9809 4.201812 GCTCACAATAGCACTTTCGCATAA 60.202 41.667 0.00 0.00 42.30 1.90
7989 9810 3.309682 GCTCACAATAGCACTTTCGCATA 59.690 43.478 0.00 0.00 42.30 3.14
7990 9811 2.096496 GCTCACAATAGCACTTTCGCAT 59.904 45.455 0.00 0.00 42.30 4.73
7991 9812 1.464608 GCTCACAATAGCACTTTCGCA 59.535 47.619 0.00 0.00 42.30 5.10
7992 9813 2.165282 GCTCACAATAGCACTTTCGC 57.835 50.000 0.00 0.00 42.30 4.70
8010 9831 1.202336 GGGTGCATGTGAGCTTAATGC 60.202 52.381 17.57 17.57 45.51 3.56
8011 9832 2.372264 AGGGTGCATGTGAGCTTAATG 58.628 47.619 0.00 0.00 34.99 1.90
8012 9833 2.814805 AGGGTGCATGTGAGCTTAAT 57.185 45.000 0.00 0.00 34.99 1.40
8013 9834 2.557924 CAAAGGGTGCATGTGAGCTTAA 59.442 45.455 0.00 0.00 34.99 1.85
8014 9835 2.161855 CAAAGGGTGCATGTGAGCTTA 58.838 47.619 0.00 0.00 34.99 3.09
8015 9836 0.963962 CAAAGGGTGCATGTGAGCTT 59.036 50.000 0.00 0.00 34.99 3.74
8016 9837 2.649831 CAAAGGGTGCATGTGAGCT 58.350 52.632 0.00 0.00 34.99 4.09
8026 9847 6.325919 TGAATTTTACTGTAGCAAAGGGTG 57.674 37.500 0.00 0.00 0.00 4.61
8027 9848 7.539034 AATGAATTTTACTGTAGCAAAGGGT 57.461 32.000 0.00 0.00 0.00 4.34
8028 9849 8.831715 AAAATGAATTTTACTGTAGCAAAGGG 57.168 30.769 0.00 0.00 38.14 3.95
8054 9875 9.650539 TTCAGATTGTTTTGAACATTCTTCAAA 57.349 25.926 12.82 4.49 45.00 2.69
8055 9876 9.820725 ATTCAGATTGTTTTGAACATTCTTCAA 57.179 25.926 12.82 10.20 45.00 2.69
8056 9877 9.820725 AATTCAGATTGTTTTGAACATTCTTCA 57.179 25.926 12.82 6.05 45.00 3.02
8088 9909 2.031068 CGTGACCGTCAATGTTTGTTGA 59.969 45.455 1.88 0.00 35.84 3.18
8089 9910 2.371432 CGTGACCGTCAATGTTTGTTG 58.629 47.619 1.88 0.00 0.00 3.33
8090 9911 1.332375 CCGTGACCGTCAATGTTTGTT 59.668 47.619 1.88 0.00 0.00 2.83
8091 9912 0.941542 CCGTGACCGTCAATGTTTGT 59.058 50.000 1.88 0.00 0.00 2.83
8092 9913 0.385473 GCCGTGACCGTCAATGTTTG 60.385 55.000 1.88 0.00 0.00 2.93
8093 9914 0.816018 TGCCGTGACCGTCAATGTTT 60.816 50.000 1.88 0.00 0.00 2.83
8094 9915 0.816018 TTGCCGTGACCGTCAATGTT 60.816 50.000 1.88 0.00 25.19 2.71
8095 9916 0.816018 TTTGCCGTGACCGTCAATGT 60.816 50.000 1.88 0.00 31.37 2.71
8096 9917 0.309302 TTTTGCCGTGACCGTCAATG 59.691 50.000 1.88 0.00 31.37 2.82
8097 9918 1.025812 TTTTTGCCGTGACCGTCAAT 58.974 45.000 1.88 0.00 31.37 2.57
8098 9919 2.478989 TTTTTGCCGTGACCGTCAA 58.521 47.368 1.88 0.00 28.87 3.18
8099 9920 4.220413 TTTTTGCCGTGACCGTCA 57.780 50.000 0.00 0.00 0.00 4.35
8114 9935 6.917217 TTTTGGAGCATCGATTTTGTTTTT 57.083 29.167 0.00 0.00 34.37 1.94
8115 9936 7.872483 AGTATTTTGGAGCATCGATTTTGTTTT 59.128 29.630 0.00 0.00 34.37 2.43
8116 9937 7.378181 AGTATTTTGGAGCATCGATTTTGTTT 58.622 30.769 0.00 0.00 34.37 2.83
8117 9938 6.924111 AGTATTTTGGAGCATCGATTTTGTT 58.076 32.000 0.00 0.00 34.37 2.83
8118 9939 6.515272 AGTATTTTGGAGCATCGATTTTGT 57.485 33.333 0.00 0.00 34.37 2.83
8119 9940 7.541783 TGAAAGTATTTTGGAGCATCGATTTTG 59.458 33.333 0.00 0.00 39.27 2.44
8120 9941 7.601856 TGAAAGTATTTTGGAGCATCGATTTT 58.398 30.769 0.00 0.00 39.27 1.82
8121 9942 7.156876 TGAAAGTATTTTGGAGCATCGATTT 57.843 32.000 0.00 0.00 39.27 2.17
8122 9943 6.757897 TGAAAGTATTTTGGAGCATCGATT 57.242 33.333 0.00 0.00 39.27 3.34
8123 9944 6.757897 TTGAAAGTATTTTGGAGCATCGAT 57.242 33.333 0.00 0.00 39.27 3.59
8124 9945 6.567687 TTTGAAAGTATTTTGGAGCATCGA 57.432 33.333 0.00 0.00 39.27 3.59
8125 9946 7.168972 TGTTTTTGAAAGTATTTTGGAGCATCG 59.831 33.333 0.00 0.00 39.27 3.84
8126 9947 8.364129 TGTTTTTGAAAGTATTTTGGAGCATC 57.636 30.769 0.00 0.00 39.27 3.91
8127 9948 8.907222 ATGTTTTTGAAAGTATTTTGGAGCAT 57.093 26.923 0.00 0.00 39.27 3.79
8128 9949 8.729805 AATGTTTTTGAAAGTATTTTGGAGCA 57.270 26.923 0.00 0.00 39.27 4.26
8176 9997 9.664332 TGAAATGACAATTTTTGGAGAGAAAAA 57.336 25.926 0.00 0.00 38.75 1.94
8177 9998 9.835389 ATGAAATGACAATTTTTGGAGAGAAAA 57.165 25.926 0.00 0.00 36.10 2.29
8178 9999 9.480053 GATGAAATGACAATTTTTGGAGAGAAA 57.520 29.630 0.00 0.00 36.10 2.52
8179 10000 8.640651 TGATGAAATGACAATTTTTGGAGAGAA 58.359 29.630 0.00 0.00 36.10 2.87
8180 10001 8.084073 GTGATGAAATGACAATTTTTGGAGAGA 58.916 33.333 0.00 0.00 36.10 3.10
8181 10002 7.868922 TGTGATGAAATGACAATTTTTGGAGAG 59.131 33.333 0.00 0.00 37.55 3.20
8182 10003 7.724287 TGTGATGAAATGACAATTTTTGGAGA 58.276 30.769 0.00 0.00 37.55 3.71
8183 10004 7.949903 TGTGATGAAATGACAATTTTTGGAG 57.050 32.000 0.00 0.00 37.55 3.86
8215 10036 7.820044 AATACAAGTTTTTGAGTTCGCAAAA 57.180 28.000 9.59 9.59 43.69 2.44
8216 10037 8.185505 AGTAATACAAGTTTTTGAGTTCGCAAA 58.814 29.630 0.00 0.00 37.73 3.68
8217 10038 7.699566 AGTAATACAAGTTTTTGAGTTCGCAA 58.300 30.769 0.00 0.00 37.73 4.85
8218 10039 7.011576 TGAGTAATACAAGTTTTTGAGTTCGCA 59.988 33.333 0.00 0.00 37.73 5.10
8219 10040 7.349711 TGAGTAATACAAGTTTTTGAGTTCGC 58.650 34.615 0.00 0.00 37.73 4.70
8220 10041 9.878599 ATTGAGTAATACAAGTTTTTGAGTTCG 57.121 29.630 0.00 0.00 37.73 3.95
8223 10044 8.793592 GGGATTGAGTAATACAAGTTTTTGAGT 58.206 33.333 0.00 0.00 37.73 3.41
8224 10045 8.792633 TGGGATTGAGTAATACAAGTTTTTGAG 58.207 33.333 0.00 0.00 37.73 3.02
8225 10046 8.698973 TGGGATTGAGTAATACAAGTTTTTGA 57.301 30.769 0.00 0.00 37.73 2.69
8226 10047 8.576442 ACTGGGATTGAGTAATACAAGTTTTTG 58.424 33.333 0.00 0.00 38.06 2.44
8227 10048 8.706322 ACTGGGATTGAGTAATACAAGTTTTT 57.294 30.769 0.00 0.00 38.06 1.94
8228 10049 9.975218 ATACTGGGATTGAGTAATACAAGTTTT 57.025 29.630 0.00 0.00 38.06 2.43
8229 10050 9.614792 GATACTGGGATTGAGTAATACAAGTTT 57.385 33.333 0.00 0.00 38.06 2.66
8230 10051 8.768397 TGATACTGGGATTGAGTAATACAAGTT 58.232 33.333 0.00 0.00 38.06 2.66
8231 10052 8.319057 TGATACTGGGATTGAGTAATACAAGT 57.681 34.615 0.00 0.00 42.80 3.16
8232 10053 9.784531 ATTGATACTGGGATTGAGTAATACAAG 57.215 33.333 0.00 0.00 34.73 3.16
8238 10059 9.778741 GATTGTATTGATACTGGGATTGAGTAA 57.221 33.333 3.11 0.00 34.41 2.24
8239 10060 8.375506 GGATTGTATTGATACTGGGATTGAGTA 58.624 37.037 3.11 0.00 34.41 2.59
8240 10061 7.072961 AGGATTGTATTGATACTGGGATTGAGT 59.927 37.037 3.11 0.00 34.41 3.41
8241 10062 7.456725 AGGATTGTATTGATACTGGGATTGAG 58.543 38.462 3.11 0.00 34.41 3.02
8242 10063 7.072328 TGAGGATTGTATTGATACTGGGATTGA 59.928 37.037 3.11 0.00 34.41 2.57
8243 10064 7.226441 TGAGGATTGTATTGATACTGGGATTG 58.774 38.462 3.11 0.00 34.41 2.67
8244 10065 7.392766 TGAGGATTGTATTGATACTGGGATT 57.607 36.000 3.11 0.00 34.41 3.01
8245 10066 6.521427 GCTGAGGATTGTATTGATACTGGGAT 60.521 42.308 3.11 0.00 34.41 3.85
8246 10067 5.221722 GCTGAGGATTGTATTGATACTGGGA 60.222 44.000 3.11 0.00 34.41 4.37
8247 10068 4.999950 GCTGAGGATTGTATTGATACTGGG 59.000 45.833 3.11 0.00 34.41 4.45
8248 10069 5.614308 TGCTGAGGATTGTATTGATACTGG 58.386 41.667 3.11 0.00 34.41 4.00
8249 10070 6.765036 AGTTGCTGAGGATTGTATTGATACTG 59.235 38.462 3.11 0.00 34.41 2.74
8250 10071 6.893583 AGTTGCTGAGGATTGTATTGATACT 58.106 36.000 3.11 0.00 34.41 2.12
8251 10072 7.171678 GGTAGTTGCTGAGGATTGTATTGATAC 59.828 40.741 0.00 0.00 0.00 2.24
8252 10073 7.071196 AGGTAGTTGCTGAGGATTGTATTGATA 59.929 37.037 0.00 0.00 0.00 2.15
8253 10074 6.058183 GGTAGTTGCTGAGGATTGTATTGAT 58.942 40.000 0.00 0.00 0.00 2.57
8254 10075 5.189736 AGGTAGTTGCTGAGGATTGTATTGA 59.810 40.000 0.00 0.00 0.00 2.57
8255 10076 5.431765 AGGTAGTTGCTGAGGATTGTATTG 58.568 41.667 0.00 0.00 0.00 1.90
8256 10077 5.396884 GGAGGTAGTTGCTGAGGATTGTATT 60.397 44.000 0.00 0.00 0.00 1.89
8257 10078 4.101741 GGAGGTAGTTGCTGAGGATTGTAT 59.898 45.833 0.00 0.00 0.00 2.29
8258 10079 3.451178 GGAGGTAGTTGCTGAGGATTGTA 59.549 47.826 0.00 0.00 0.00 2.41
8259 10080 2.237392 GGAGGTAGTTGCTGAGGATTGT 59.763 50.000 0.00 0.00 0.00 2.71
8260 10081 2.237143 TGGAGGTAGTTGCTGAGGATTG 59.763 50.000 0.00 0.00 0.00 2.67
8261 10082 2.551270 TGGAGGTAGTTGCTGAGGATT 58.449 47.619 0.00 0.00 0.00 3.01
8262 10083 2.254152 TGGAGGTAGTTGCTGAGGAT 57.746 50.000 0.00 0.00 0.00 3.24
8263 10084 2.024176 TTGGAGGTAGTTGCTGAGGA 57.976 50.000 0.00 0.00 0.00 3.71
8264 10085 2.814336 GTTTTGGAGGTAGTTGCTGAGG 59.186 50.000 0.00 0.00 0.00 3.86
8265 10086 3.744660 AGTTTTGGAGGTAGTTGCTGAG 58.255 45.455 0.00 0.00 0.00 3.35
8266 10087 3.857157 AGTTTTGGAGGTAGTTGCTGA 57.143 42.857 0.00 0.00 0.00 4.26
8267 10088 3.882888 TGAAGTTTTGGAGGTAGTTGCTG 59.117 43.478 0.00 0.00 0.00 4.41
8268 10089 4.137543 CTGAAGTTTTGGAGGTAGTTGCT 58.862 43.478 0.00 0.00 0.00 3.91
8269 10090 3.253432 CCTGAAGTTTTGGAGGTAGTTGC 59.747 47.826 0.00 0.00 0.00 4.17
8270 10091 4.714632 TCCTGAAGTTTTGGAGGTAGTTG 58.285 43.478 0.00 0.00 0.00 3.16
8271 10092 4.974399 CTCCTGAAGTTTTGGAGGTAGTT 58.026 43.478 14.02 0.00 42.55 2.24
8272 10093 4.625607 CTCCTGAAGTTTTGGAGGTAGT 57.374 45.455 14.02 0.00 42.55 2.73
8277 10098 2.373502 AGGTCCTCCTGAAGTTTTGGAG 59.626 50.000 14.59 14.59 43.33 3.86
8278 10099 2.418669 AGGTCCTCCTGAAGTTTTGGA 58.581 47.619 0.00 0.00 43.33 3.53
8279 10100 2.959465 AGGTCCTCCTGAAGTTTTGG 57.041 50.000 0.00 0.00 43.33 3.28
8289 10110 0.042881 GGTTAGGGTCAGGTCCTCCT 59.957 60.000 3.22 3.22 46.37 3.69
8290 10111 0.252558 TGGTTAGGGTCAGGTCCTCC 60.253 60.000 0.00 0.00 35.92 4.30
8291 10112 1.555533 CTTGGTTAGGGTCAGGTCCTC 59.444 57.143 0.00 0.00 35.92 3.71
8292 10113 1.132495 ACTTGGTTAGGGTCAGGTCCT 60.132 52.381 0.00 0.00 38.36 3.85
8293 10114 1.278413 GACTTGGTTAGGGTCAGGTCC 59.722 57.143 0.00 0.00 35.02 4.46
8294 10115 1.975680 TGACTTGGTTAGGGTCAGGTC 59.024 52.381 0.00 0.00 39.46 3.85
8295 10116 2.112279 TGACTTGGTTAGGGTCAGGT 57.888 50.000 0.00 0.00 35.44 4.00
8296 10117 3.775316 ACTATGACTTGGTTAGGGTCAGG 59.225 47.826 0.00 0.00 42.13 3.86
8297 10118 5.450137 CGTACTATGACTTGGTTAGGGTCAG 60.450 48.000 0.00 0.00 42.13 3.51
8298 10119 4.400251 CGTACTATGACTTGGTTAGGGTCA 59.600 45.833 0.00 0.00 42.85 4.02
8299 10120 4.641989 TCGTACTATGACTTGGTTAGGGTC 59.358 45.833 0.00 0.00 0.00 4.46
8300 10121 4.603131 TCGTACTATGACTTGGTTAGGGT 58.397 43.478 0.00 0.00 0.00 4.34
8301 10122 5.786264 ATCGTACTATGACTTGGTTAGGG 57.214 43.478 0.00 0.00 0.00 3.53
8306 10127 9.962783 GTTCTAATAATCGTACTATGACTTGGT 57.037 33.333 0.00 0.00 0.00 3.67
8307 10128 9.114965 CGTTCTAATAATCGTACTATGACTTGG 57.885 37.037 0.00 0.00 0.00 3.61
8308 10129 9.874215 TCGTTCTAATAATCGTACTATGACTTG 57.126 33.333 0.00 0.00 0.00 3.16
8309 10130 9.875675 GTCGTTCTAATAATCGTACTATGACTT 57.124 33.333 0.00 0.00 0.00 3.01
8310 10131 8.502387 GGTCGTTCTAATAATCGTACTATGACT 58.498 37.037 0.00 0.00 0.00 3.41
8311 10132 8.285394 TGGTCGTTCTAATAATCGTACTATGAC 58.715 37.037 0.00 0.00 0.00 3.06
8312 10133 8.382030 TGGTCGTTCTAATAATCGTACTATGA 57.618 34.615 0.00 0.00 0.00 2.15
8313 10134 9.454585 TTTGGTCGTTCTAATAATCGTACTATG 57.545 33.333 0.00 0.00 0.00 2.23
8316 10137 8.937634 ATTTTGGTCGTTCTAATAATCGTACT 57.062 30.769 0.00 0.00 0.00 2.73
8318 10139 8.957028 CGTATTTTGGTCGTTCTAATAATCGTA 58.043 33.333 0.00 0.00 0.00 3.43
8319 10140 7.515684 GCGTATTTTGGTCGTTCTAATAATCGT 60.516 37.037 0.00 0.00 0.00 3.73
8320 10141 6.784227 GCGTATTTTGGTCGTTCTAATAATCG 59.216 38.462 0.00 0.00 0.00 3.34
8321 10142 7.848491 AGCGTATTTTGGTCGTTCTAATAATC 58.152 34.615 0.00 0.00 0.00 1.75
8322 10143 7.781548 AGCGTATTTTGGTCGTTCTAATAAT 57.218 32.000 0.00 0.00 0.00 1.28
8323 10144 7.043192 GCTAGCGTATTTTGGTCGTTCTAATAA 60.043 37.037 0.00 0.00 0.00 1.40
8324 10145 6.418819 GCTAGCGTATTTTGGTCGTTCTAATA 59.581 38.462 0.00 0.00 0.00 0.98
8325 10146 5.233689 GCTAGCGTATTTTGGTCGTTCTAAT 59.766 40.000 0.00 0.00 0.00 1.73
8326 10147 4.563976 GCTAGCGTATTTTGGTCGTTCTAA 59.436 41.667 0.00 0.00 0.00 2.10
8327 10148 4.107622 GCTAGCGTATTTTGGTCGTTCTA 58.892 43.478 0.00 0.00 0.00 2.10
8328 10149 2.928116 GCTAGCGTATTTTGGTCGTTCT 59.072 45.455 0.00 0.00 0.00 3.01
8329 10150 2.928116 AGCTAGCGTATTTTGGTCGTTC 59.072 45.455 9.55 0.00 0.00 3.95
8330 10151 2.968675 AGCTAGCGTATTTTGGTCGTT 58.031 42.857 9.55 0.00 0.00 3.85
8331 10152 2.667473 AGCTAGCGTATTTTGGTCGT 57.333 45.000 9.55 0.00 0.00 4.34
8332 10153 4.743151 TGATAAGCTAGCGTATTTTGGTCG 59.257 41.667 21.72 0.00 0.00 4.79
8333 10154 5.753921 AGTGATAAGCTAGCGTATTTTGGTC 59.246 40.000 21.72 11.12 0.00 4.02
8334 10155 5.671493 AGTGATAAGCTAGCGTATTTTGGT 58.329 37.500 21.72 2.05 0.00 3.67
8335 10156 5.107837 CGAGTGATAAGCTAGCGTATTTTGG 60.108 44.000 21.72 9.90 0.00 3.28
8336 10157 5.610552 GCGAGTGATAAGCTAGCGTATTTTG 60.611 44.000 21.72 15.23 0.00 2.44
8337 10158 4.444720 GCGAGTGATAAGCTAGCGTATTTT 59.555 41.667 21.72 11.86 0.00 1.82
8338 10159 3.982058 GCGAGTGATAAGCTAGCGTATTT 59.018 43.478 21.72 12.16 0.00 1.40
8339 10160 3.566523 GCGAGTGATAAGCTAGCGTATT 58.433 45.455 21.72 8.56 0.00 1.89
8340 10161 2.095161 GGCGAGTGATAAGCTAGCGTAT 60.095 50.000 21.10 21.10 35.83 3.06
8341 10162 1.266175 GGCGAGTGATAAGCTAGCGTA 59.734 52.381 12.86 12.86 35.83 4.42
8342 10163 0.030908 GGCGAGTGATAAGCTAGCGT 59.969 55.000 9.55 9.04 35.83 5.07
8343 10164 0.312416 AGGCGAGTGATAAGCTAGCG 59.688 55.000 9.55 0.00 35.83 4.26
8344 10165 2.517650 AAGGCGAGTGATAAGCTAGC 57.482 50.000 6.62 6.62 34.55 3.42
8345 10166 5.861251 CAGAATAAGGCGAGTGATAAGCTAG 59.139 44.000 0.00 0.00 0.00 3.42
8346 10167 5.302059 ACAGAATAAGGCGAGTGATAAGCTA 59.698 40.000 0.00 0.00 0.00 3.32
8347 10168 4.100189 ACAGAATAAGGCGAGTGATAAGCT 59.900 41.667 0.00 0.00 0.00 3.74
8348 10169 4.210120 CACAGAATAAGGCGAGTGATAAGC 59.790 45.833 0.00 0.00 0.00 3.09
8349 10170 5.592054 TCACAGAATAAGGCGAGTGATAAG 58.408 41.667 0.00 0.00 31.72 1.73
8350 10171 5.592104 TCACAGAATAAGGCGAGTGATAA 57.408 39.130 0.00 0.00 31.72 1.75
8351 10172 5.348986 GTTCACAGAATAAGGCGAGTGATA 58.651 41.667 0.00 0.00 36.10 2.15
8352 10173 4.184629 GTTCACAGAATAAGGCGAGTGAT 58.815 43.478 0.00 0.00 36.10 3.06
8353 10174 3.585862 GTTCACAGAATAAGGCGAGTGA 58.414 45.455 0.00 0.00 34.54 3.41
8354 10175 2.345641 CGTTCACAGAATAAGGCGAGTG 59.654 50.000 0.00 0.00 0.00 3.51
8355 10176 2.607187 CGTTCACAGAATAAGGCGAGT 58.393 47.619 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.