Multiple sequence alignment - TraesCS6A01G151400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G151400 chr6A 100.000 2618 0 0 1 2618 135434869 135432252 0.000000e+00 4835
1 TraesCS6A01G151400 chr3B 92.676 2089 137 13 1 2077 783217689 783219773 0.000000e+00 2996
2 TraesCS6A01G151400 chr3B 91.667 552 44 2 2068 2618 783219819 783220369 0.000000e+00 763
3 TraesCS6A01G151400 chr3A 79.856 1251 235 14 453 1691 175860929 175862174 0.000000e+00 898
4 TraesCS6A01G151400 chr3A 78.644 1283 248 16 425 1691 102076900 102075628 0.000000e+00 828
5 TraesCS6A01G151400 chr3A 79.567 832 160 9 868 1691 110872879 110873708 1.040000e-163 586
6 TraesCS6A01G151400 chr3A 75.161 777 155 27 103 860 110813089 110813846 5.400000e-87 331
7 TraesCS6A01G151400 chr3A 77.991 468 90 11 2134 2595 175862716 175863176 5.520000e-72 281
8 TraesCS6A01G151400 chr2B 79.536 1251 237 15 453 1691 495227726 495228969 0.000000e+00 874
9 TraesCS6A01G151400 chr2B 79.657 408 77 6 2191 2595 495229568 495229972 3.300000e-74 289
10 TraesCS6A01G151400 chr7A 79.103 1249 243 16 455 1691 16994393 16995635 0.000000e+00 845
11 TraesCS6A01G151400 chr7A 77.437 749 141 21 453 1191 67818149 67817419 3.120000e-114 422
12 TraesCS6A01G151400 chr7A 79.254 429 83 6 2191 2615 67817304 67816878 7.090000e-76 294
13 TraesCS6A01G151400 chr7A 79.607 407 79 4 2191 2595 16996234 16996638 3.300000e-74 289
14 TraesCS6A01G151400 chr5B 78.998 1238 242 14 466 1691 600375436 600376667 0.000000e+00 830
15 TraesCS6A01G151400 chr1A 78.497 1251 252 15 453 1691 255725571 255724326 0.000000e+00 804
16 TraesCS6A01G151400 chr1A 77.551 490 94 14 2134 2615 255723783 255723302 5.520000e-72 281
17 TraesCS6A01G151400 chr4A 78.497 1251 240 17 453 1691 70770483 70769250 0.000000e+00 793
18 TraesCS6A01G151400 chr4A 77.347 490 95 13 2134 2615 70768707 70768226 2.570000e-70 276


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G151400 chr6A 135432252 135434869 2617 True 4835.0 4835 100.0000 1 2618 1 chr6A.!!$R1 2617
1 TraesCS6A01G151400 chr3B 783217689 783220369 2680 False 1879.5 2996 92.1715 1 2618 2 chr3B.!!$F1 2617
2 TraesCS6A01G151400 chr3A 102075628 102076900 1272 True 828.0 828 78.6440 425 1691 1 chr3A.!!$R1 1266
3 TraesCS6A01G151400 chr3A 175860929 175863176 2247 False 589.5 898 78.9235 453 2595 2 chr3A.!!$F3 2142
4 TraesCS6A01G151400 chr3A 110872879 110873708 829 False 586.0 586 79.5670 868 1691 1 chr3A.!!$F2 823
5 TraesCS6A01G151400 chr3A 110813089 110813846 757 False 331.0 331 75.1610 103 860 1 chr3A.!!$F1 757
6 TraesCS6A01G151400 chr2B 495227726 495229972 2246 False 581.5 874 79.5965 453 2595 2 chr2B.!!$F1 2142
7 TraesCS6A01G151400 chr7A 16994393 16996638 2245 False 567.0 845 79.3550 455 2595 2 chr7A.!!$F1 2140
8 TraesCS6A01G151400 chr7A 67816878 67818149 1271 True 358.0 422 78.3455 453 2615 2 chr7A.!!$R1 2162
9 TraesCS6A01G151400 chr5B 600375436 600376667 1231 False 830.0 830 78.9980 466 1691 1 chr5B.!!$F1 1225
10 TraesCS6A01G151400 chr1A 255723302 255725571 2269 True 542.5 804 78.0240 453 2615 2 chr1A.!!$R1 2162
11 TraesCS6A01G151400 chr4A 70768226 70770483 2257 True 534.5 793 77.9220 453 2615 2 chr4A.!!$R1 2162

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
201 202 0.179062 AGCTATCTTGCAGGCTTCCG 60.179 55.0 0.0 0.0 34.99 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1931 2107 0.57259 CGACTATTTGAAGAGCCGCG 59.427 55.0 0.0 0.0 0.0 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 9.364989 TGTTTTCCAGTGAATAAAAAGTGAAAG 57.635 29.630 0.00 0.00 0.00 2.62
117 118 5.652994 TGTTTACCATATTCCAGCAAACC 57.347 39.130 0.00 0.00 0.00 3.27
197 198 6.535963 AAAAATTAAGCTATCTTGCAGGCT 57.464 33.333 0.00 0.00 36.53 4.58
199 200 5.764487 AATTAAGCTATCTTGCAGGCTTC 57.236 39.130 13.25 0.00 42.86 3.86
201 202 0.179062 AGCTATCTTGCAGGCTTCCG 60.179 55.000 0.00 0.00 34.99 4.30
203 204 1.542108 GCTATCTTGCAGGCTTCCGAT 60.542 52.381 0.00 0.00 0.00 4.18
204 205 2.843701 CTATCTTGCAGGCTTCCGATT 58.156 47.619 0.00 0.00 0.00 3.34
205 206 2.134789 ATCTTGCAGGCTTCCGATTT 57.865 45.000 0.00 0.00 0.00 2.17
206 207 1.167851 TCTTGCAGGCTTCCGATTTG 58.832 50.000 0.00 0.00 0.00 2.32
213 225 1.025041 GGCTTCCGATTTGATGGTCC 58.975 55.000 0.00 0.00 0.00 4.46
260 272 6.808704 GCAGATTGGAAGAAAATGGTAAGTTC 59.191 38.462 0.00 0.00 0.00 3.01
263 275 5.705609 TGGAAGAAAATGGTAAGTTCTGC 57.294 39.130 0.00 0.00 32.03 4.26
266 278 5.390991 GGAAGAAAATGGTAAGTTCTGCTCG 60.391 44.000 0.00 0.00 32.03 5.03
269 281 5.940470 AGAAAATGGTAAGTTCTGCTCGAAT 59.060 36.000 0.00 0.00 33.45 3.34
415 427 1.404181 GCCATCATAAGCGCCGAGATA 60.404 52.381 2.29 0.00 0.00 1.98
418 430 3.935203 CCATCATAAGCGCCGAGATATTT 59.065 43.478 2.29 0.00 0.00 1.40
464 476 3.259123 TCACTCTTTAGCTGATGCAGTCA 59.741 43.478 0.00 0.00 42.74 3.41
537 550 1.089920 GTGCTTGTATGGCTGTGAGG 58.910 55.000 0.00 0.00 0.00 3.86
622 635 1.135199 GTCGTTGCCTCGGTCTATGAA 60.135 52.381 0.00 0.00 0.00 2.57
625 638 3.382227 TCGTTGCCTCGGTCTATGAAATA 59.618 43.478 0.00 0.00 0.00 1.40
682 717 7.635648 TGCCTTAATGGTTAGTACTATTTGGT 58.364 34.615 2.79 0.00 36.86 3.67
863 901 9.623000 AACAAGTAGGAGTGTTATAAAAACAGT 57.377 29.630 0.00 0.00 36.22 3.55
864 902 9.623000 ACAAGTAGGAGTGTTATAAAAACAGTT 57.377 29.630 0.17 0.00 34.24 3.16
865 903 9.878599 CAAGTAGGAGTGTTATAAAAACAGTTG 57.121 33.333 0.17 0.00 34.24 3.16
870 908 6.308371 AGTGTTATAAAAACAGTTGTCCCG 57.692 37.500 0.00 0.00 30.13 5.14
871 909 5.239963 AGTGTTATAAAAACAGTTGTCCCGG 59.760 40.000 0.00 0.00 30.13 5.73
958 999 4.423625 AGTAGTATAAAAGCCAGGCTGG 57.576 45.455 29.44 29.44 39.62 4.85
971 1012 2.048603 GGCTGGGACTTGTCCATGC 61.049 63.158 19.90 19.99 33.29 4.06
976 1017 2.616458 GGACTTGTCCATGCCCCCT 61.616 63.158 14.34 0.00 0.00 4.79
978 1019 2.276740 CTTGTCCATGCCCCCTCC 59.723 66.667 0.00 0.00 0.00 4.30
989 1031 0.823769 GCCCCCTCCCGATGAAAATC 60.824 60.000 0.00 0.00 0.00 2.17
993 1036 3.477530 CCCCTCCCGATGAAAATCTTAC 58.522 50.000 0.00 0.00 0.00 2.34
1029 1072 2.887152 GGAAGAGAACAATGTTGTGGCT 59.113 45.455 2.20 0.00 41.31 4.75
1076 1125 1.412343 TGATGCGAATCCGATGGAAGA 59.588 47.619 0.00 0.00 38.22 2.87
1176 1225 7.703621 CCTATTTCACTTTCATTTGGTATGCTG 59.296 37.037 0.00 0.00 0.00 4.41
1179 1228 7.517614 TTCACTTTCATTTGGTATGCTGTTA 57.482 32.000 0.00 0.00 0.00 2.41
1182 1231 7.119699 TCACTTTCATTTGGTATGCTGTTAGAG 59.880 37.037 0.00 0.00 0.00 2.43
1191 1240 7.898014 TGGTATGCTGTTAGAGATCTTCTTA 57.102 36.000 0.00 0.00 37.36 2.10
1310 1367 9.349713 AGTACATACAAAAATCTTGAAGGACAA 57.650 29.630 0.00 0.00 36.97 3.18
1381 1438 8.322906 TCCATTCGTGGATGATTAATATGTTC 57.677 34.615 0.00 0.00 32.09 3.18
1417 1475 7.389053 AGCATCCTTTGTTAGTAGTTGAAGAAG 59.611 37.037 0.00 0.00 0.00 2.85
1454 1512 4.810491 GCATGTTGGAGAAAACATTGTTGT 59.190 37.500 2.13 0.00 46.19 3.32
1633 1692 6.797033 CGATGAGTAACTTTGAAACATGGAAC 59.203 38.462 0.00 0.00 0.00 3.62
1648 1707 4.263462 ACATGGAACTTGCAGATGGTAGAA 60.263 41.667 0.00 0.00 0.00 2.10
1774 1950 8.902540 TGTGGCCAATATATGTTAGTTCTTAG 57.097 34.615 7.24 0.00 0.00 2.18
1855 2031 5.769662 AGTTCAATGAAATGGCTGAGTTGTA 59.230 36.000 0.00 0.00 0.00 2.41
1902 2078 4.695455 CCTCTAACATTATTGGTATGCGGG 59.305 45.833 0.00 0.00 0.00 6.13
1934 2110 9.653067 TCAAATGTATTATGTATTTTAACCGCG 57.347 29.630 0.00 0.00 0.00 6.46
1941 2117 2.674357 TGTATTTTAACCGCGGCTCTTC 59.326 45.455 28.58 9.04 0.00 2.87
1944 2120 1.595466 TTTAACCGCGGCTCTTCAAA 58.405 45.000 28.58 13.21 0.00 2.69
2050 2285 9.891828 TTAAGTACAAACAGCTTACATGAATTG 57.108 29.630 0.00 0.00 0.00 2.32
2052 2287 8.615878 AGTACAAACAGCTTACATGAATTGTA 57.384 30.769 0.00 0.79 39.87 2.41
2054 2289 7.270757 ACAAACAGCTTACATGAATTGTACA 57.729 32.000 0.00 0.00 40.53 2.90
2251 2543 7.790027 AGTGAGTACATAGAAGCATGAAATCT 58.210 34.615 0.00 0.00 0.00 2.40
2276 2568 6.483307 TGGTGCTGAATAATAGTACAATGAGC 59.517 38.462 0.00 0.00 33.18 4.26
2277 2569 6.708054 GGTGCTGAATAATAGTACAATGAGCT 59.292 38.462 0.00 0.00 33.18 4.09
2279 2571 9.429359 GTGCTGAATAATAGTACAATGAGCTAT 57.571 33.333 0.00 0.00 32.04 2.97
2371 2663 5.055812 AGTCTTTCTTCTTTGACTCAGCAG 58.944 41.667 0.00 0.00 35.13 4.24
2379 2671 5.227569 TCTTTGACTCAGCAGTAATGGAA 57.772 39.130 0.00 0.00 30.63 3.53
2384 2676 5.129634 TGACTCAGCAGTAATGGAAAACAA 58.870 37.500 0.00 0.00 30.63 2.83
2391 2683 5.647658 AGCAGTAATGGAAAACAATCGATCA 59.352 36.000 0.00 0.00 0.00 2.92
2411 2703 7.042456 TCGATCATTCAGCAGCTTATTCTTTAC 60.042 37.037 0.00 0.00 0.00 2.01
2419 2711 7.230510 TCAGCAGCTTATTCTTTACAAGGAAAA 59.769 33.333 0.00 0.00 0.00 2.29
2496 2788 4.842531 TTCCATGTCAAGATGAAGGCTA 57.157 40.909 0.00 0.00 0.00 3.93
2511 2803 2.552367 AGGCTAGCCAGGTAGTTCTTT 58.448 47.619 34.70 7.25 38.92 2.52
2570 2862 4.646040 CCATGCACATTCATCTCCCTAAAA 59.354 41.667 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 9.097257 CACTTTTTATTCACTGGAAAACACATT 57.903 29.630 0.00 0.00 36.43 2.71
64 65 7.038154 TCACCTTTCACTTTTTATTCACTGG 57.962 36.000 0.00 0.00 0.00 4.00
78 79 8.500753 TGGTAAACATGTATATCACCTTTCAC 57.499 34.615 0.00 0.00 0.00 3.18
84 85 9.733556 TGGAATATGGTAAACATGTATATCACC 57.266 33.333 0.00 6.75 40.82 4.02
179 180 3.545703 GGAAGCCTGCAAGATAGCTTAA 58.454 45.455 0.00 0.00 45.20 1.85
187 188 1.167851 CAAATCGGAAGCCTGCAAGA 58.832 50.000 0.00 0.00 34.07 3.02
197 198 6.209589 TGTTTATTTGGACCATCAAATCGGAA 59.790 34.615 0.00 0.00 43.70 4.30
199 200 5.960113 TGTTTATTTGGACCATCAAATCGG 58.040 37.500 0.00 0.00 43.70 4.18
201 202 9.956720 CTCTATGTTTATTTGGACCATCAAATC 57.043 33.333 0.00 0.00 43.70 2.17
203 204 7.893302 ACCTCTATGTTTATTTGGACCATCAAA 59.107 33.333 0.00 0.00 40.37 2.69
204 205 7.410174 ACCTCTATGTTTATTTGGACCATCAA 58.590 34.615 0.00 0.00 0.00 2.57
205 206 6.969043 ACCTCTATGTTTATTTGGACCATCA 58.031 36.000 0.00 0.00 0.00 3.07
206 207 9.003658 CATACCTCTATGTTTATTTGGACCATC 57.996 37.037 0.00 0.00 0.00 3.51
213 225 9.764363 TCTGCTACATACCTCTATGTTTATTTG 57.236 33.333 0.00 0.00 40.16 2.32
263 275 5.998454 AACATATTTCTGCTCCATTCGAG 57.002 39.130 0.00 0.00 42.04 4.04
266 278 7.315142 TGAACAAACATATTTCTGCTCCATTC 58.685 34.615 0.00 0.00 0.00 2.67
269 281 6.040278 TGTTGAACAAACATATTTCTGCTCCA 59.960 34.615 0.00 0.00 43.96 3.86
320 332 8.762481 AGGTTAGTAAGGATTTTGTTTCAGTT 57.238 30.769 0.00 0.00 0.00 3.16
415 427 7.180663 ACTTCTCTTCCAATCTCAATCCAAAT 58.819 34.615 0.00 0.00 0.00 2.32
418 430 5.768980 ACTTCTCTTCCAATCTCAATCCA 57.231 39.130 0.00 0.00 0.00 3.41
450 462 2.182827 ACCTCTTGACTGCATCAGCTA 58.817 47.619 0.00 0.00 42.74 3.32
464 476 7.108847 CCATTGATGTTCTTCTTCTACCTCTT 58.891 38.462 0.00 0.00 0.00 2.85
537 550 3.643792 ACTATCTCTGCCCATACCTCAAC 59.356 47.826 0.00 0.00 0.00 3.18
605 618 4.945246 TCTATTTCATAGACCGAGGCAAC 58.055 43.478 0.00 0.00 36.98 4.17
622 635 8.219868 TGTTGTCATATCCATGTCCAATCTATT 58.780 33.333 0.00 0.00 33.57 1.73
625 638 5.824624 GTGTTGTCATATCCATGTCCAATCT 59.175 40.000 0.00 0.00 33.57 2.40
682 717 9.838975 CAATGTGTAAAATTTACATGTCTGCTA 57.161 29.630 19.82 2.90 0.00 3.49
784 822 3.545703 AGTTTCACTGTTGGGTCTCTTG 58.454 45.455 0.00 0.00 0.00 3.02
851 889 8.810990 AATATCCGGGACAACTGTTTTTATAA 57.189 30.769 0.00 0.00 0.00 0.98
852 890 8.810990 AAATATCCGGGACAACTGTTTTTATA 57.189 30.769 0.00 0.00 0.00 0.98
855 893 5.047590 GGAAATATCCGGGACAACTGTTTTT 60.048 40.000 0.00 0.00 35.59 1.94
971 1012 0.846693 AGATTTTCATCGGGAGGGGG 59.153 55.000 0.00 0.00 34.17 5.40
976 1017 4.224147 TGTGGAGTAAGATTTTCATCGGGA 59.776 41.667 0.00 0.00 34.17 5.14
978 1019 6.316140 TCATTGTGGAGTAAGATTTTCATCGG 59.684 38.462 0.00 0.00 34.17 4.18
980 1021 7.192232 GCTCATTGTGGAGTAAGATTTTCATC 58.808 38.462 0.00 0.00 37.24 2.92
989 1031 2.237143 TCCTGGCTCATTGTGGAGTAAG 59.763 50.000 0.00 0.00 37.24 2.34
993 1036 1.280133 TCTTCCTGGCTCATTGTGGAG 59.720 52.381 0.00 0.00 37.97 3.86
1029 1072 1.280133 CCATTGGTGAAGGCTGAGAGA 59.720 52.381 0.00 0.00 0.00 3.10
1110 1159 8.514594 CACTGAACATAACATAACAAGGAACAT 58.485 33.333 0.00 0.00 0.00 2.71
1127 1176 6.322201 AGGAAACTTCAAATGTCACTGAACAT 59.678 34.615 0.00 0.00 38.54 2.71
1227 1278 5.485353 TGAGCTCCCATCCGATATTTTCTAT 59.515 40.000 12.15 0.00 0.00 1.98
1278 1329 8.373048 TCAAGATTTTTGTATGTACTGAACGT 57.627 30.769 0.00 0.00 0.00 3.99
1310 1367 6.151144 GCTTACTTCTATTTGTTCCACATGGT 59.849 38.462 0.00 0.00 36.34 3.55
1381 1438 4.978083 ACAAAGGATGCTGCATAGAAAG 57.022 40.909 16.23 8.52 0.00 2.62
1454 1512 7.628769 TCTGCTTCAAAATGTATATGCTCAA 57.371 32.000 0.00 0.00 0.00 3.02
1539 1597 3.565902 GCTGGAAGTATGTAATTGGCTCC 59.434 47.826 0.00 0.00 35.30 4.70
1633 1692 4.756642 TGAAACACTTCTACCATCTGCAAG 59.243 41.667 0.00 0.00 32.33 4.01
1648 1707 9.248291 GACACACAAAATGAAATATGAAACACT 57.752 29.630 0.00 0.00 0.00 3.55
1774 1950 9.614465 GAAGCAACTTCAATTTTAAACGTTAAC 57.386 29.630 0.00 0.00 39.95 2.01
1874 2050 8.832521 CGCATACCAATAATGTTAGAGGTTTTA 58.167 33.333 0.00 0.00 0.00 1.52
1893 2069 2.973694 TTTGAGTAGTCCCGCATACC 57.026 50.000 0.00 0.00 0.00 2.73
1931 2107 0.572590 CGACTATTTGAAGAGCCGCG 59.427 55.000 0.00 0.00 0.00 6.46
1934 2110 9.646427 AATTCTATATCGACTATTTGAAGAGCC 57.354 33.333 0.00 0.00 0.00 4.70
1993 2228 6.073765 ACAGCTTATGTAAGTGAAACGTGAAG 60.074 38.462 0.00 0.00 41.33 3.02
2028 2263 8.286800 TGTACAATTCATGTAAGCTGTTTGTAC 58.713 33.333 13.28 13.28 45.81 2.90
2035 2270 8.239314 ACTTCATTGTACAATTCATGTAAGCTG 58.761 33.333 18.50 4.85 45.81 4.24
2087 2378 7.695480 TTCGGGATGATTTGATTAAAGTCAA 57.305 32.000 0.00 0.00 36.38 3.18
2089 2380 7.762382 AGTTTCGGGATGATTTGATTAAAGTC 58.238 34.615 0.00 0.00 0.00 3.01
2092 2383 7.148086 CCTGAGTTTCGGGATGATTTGATTAAA 60.148 37.037 0.00 0.00 45.95 1.52
2098 2389 3.609853 TCCTGAGTTTCGGGATGATTTG 58.390 45.455 2.50 0.00 46.55 2.32
2106 2397 3.057526 GGATTTGTTTCCTGAGTTTCGGG 60.058 47.826 0.00 0.00 44.41 5.14
2228 2520 6.988580 CCAGATTTCATGCTTCTATGTACTCA 59.011 38.462 0.00 0.00 0.00 3.41
2251 2543 6.483307 GCTCATTGTACTATTATTCAGCACCA 59.517 38.462 0.00 0.00 0.00 4.17
2284 2576 9.436957 CATTAGTGTTTACTATCAGTGAACCTT 57.563 33.333 10.37 3.32 42.09 3.50
2286 2578 8.997621 TCATTAGTGTTTACTATCAGTGAACC 57.002 34.615 10.37 3.97 42.09 3.62
2323 2615 9.689075 CTACGTAATACTGTTGTTGATTTCATG 57.311 33.333 0.00 0.00 0.00 3.07
2371 2663 7.166473 GCTGAATGATCGATTGTTTTCCATTAC 59.834 37.037 0.00 0.00 0.00 1.89
2379 2671 3.693085 AGCTGCTGAATGATCGATTGTTT 59.307 39.130 0.00 0.00 0.00 2.83
2384 2676 5.549347 AGAATAAGCTGCTGAATGATCGAT 58.451 37.500 1.35 0.00 0.00 3.59
2411 2703 5.758784 AGTAACCGAGAGAACTTTTTCCTTG 59.241 40.000 0.00 0.00 31.28 3.61
2419 2711 6.408107 AGAGAAAAGTAACCGAGAGAACTT 57.592 37.500 0.00 0.00 33.72 2.66
2496 2788 4.783227 TCTCCAATAAAGAACTACCTGGCT 59.217 41.667 0.00 0.00 0.00 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.