Multiple sequence alignment - TraesCS6A01G150400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G150400 chr6A 100.000 3383 0 0 1 3383 134201119 134204501 0.000000e+00 6248.0
1 TraesCS6A01G150400 chr6A 80.822 219 31 9 2 213 72598164 72597950 9.710000e-36 161.0
2 TraesCS6A01G150400 chr7A 97.041 2805 72 2 583 3383 47492055 47489258 0.000000e+00 4710.0
3 TraesCS6A01G150400 chr7A 95.046 2806 70 21 582 3383 55411699 55408959 0.000000e+00 4348.0
4 TraesCS6A01G150400 chr7A 94.113 2820 120 26 581 3381 164739260 164736468 0.000000e+00 4246.0
5 TraesCS6A01G150400 chr7A 93.709 1669 72 24 1737 3383 642166648 642168305 0.000000e+00 2470.0
6 TraesCS6A01G150400 chr7A 93.986 715 32 3 2672 3383 133612109 133611403 0.000000e+00 1072.0
7 TraesCS6A01G150400 chr7A 82.648 219 27 7 2 213 36117773 36117987 2.070000e-42 183.0
8 TraesCS6A01G150400 chr2A 94.975 2806 72 6 582 3383 38528886 38526146 0.000000e+00 4337.0
9 TraesCS6A01G150400 chr2A 94.197 2740 110 32 582 3299 764066997 764069709 0.000000e+00 4133.0
10 TraesCS6A01G150400 chr2A 88.889 180 12 3 2669 2847 764069126 764069298 7.350000e-52 215.0
11 TraesCS6A01G150400 chr2A 84.434 212 19 10 3 213 642962245 642962443 2.660000e-46 196.0
12 TraesCS6A01G150400 chr2A 88.235 68 8 0 379 446 561592899 561592966 7.780000e-12 82.4
13 TraesCS6A01G150400 chr5A 94.045 2821 122 33 582 3383 513856834 513859627 0.000000e+00 4237.0
14 TraesCS6A01G150400 chr5A 93.931 2834 92 32 582 3383 402974416 402977201 0.000000e+00 4207.0
15 TraesCS6A01G150400 chr5A 93.607 2847 122 39 582 3383 243925610 243928441 0.000000e+00 4194.0
16 TraesCS6A01G150400 chr5A 84.186 215 26 7 3 213 44952722 44952512 5.720000e-48 202.0
17 TraesCS6A01G150400 chr4D 91.643 2860 157 49 576 3383 440465461 440462632 0.000000e+00 3882.0
18 TraesCS6A01G150400 chr4D 76.721 305 67 4 227 528 25211480 25211783 2.090000e-37 167.0
19 TraesCS6A01G150400 chr7D 91.529 2845 160 40 582 3383 530867456 530864650 0.000000e+00 3843.0
20 TraesCS6A01G150400 chr5D 94.741 1179 54 5 582 1759 443521254 443522425 0.000000e+00 1827.0
21 TraesCS6A01G150400 chr3A 96.970 1023 30 1 2345 3366 741372857 741371835 0.000000e+00 1716.0
22 TraesCS6A01G150400 chr3A 95.798 1071 24 2 1109 2175 741373963 741372910 0.000000e+00 1709.0
23 TraesCS6A01G150400 chr3A 90.278 1224 77 29 2180 3383 674547419 674546218 0.000000e+00 1563.0
24 TraesCS6A01G150400 chr3A 81.735 219 29 9 2 213 685952218 685952432 4.490000e-39 172.0
25 TraesCS6A01G150400 chr3A 74.434 309 72 7 224 528 117317748 117318053 3.540000e-25 126.0
26 TraesCS6A01G150400 chr6B 92.603 365 22 4 219 581 198404702 198405063 1.390000e-143 520.0
27 TraesCS6A01G150400 chr6D 91.870 369 23 5 212 578 109272005 109272368 3.010000e-140 508.0
28 TraesCS6A01G150400 chr1B 80.156 257 35 16 316 565 377962056 377962303 9.650000e-41 178.0
29 TraesCS6A01G150400 chr3B 82.028 217 29 7 2 213 765602179 765601968 3.470000e-40 176.0
30 TraesCS6A01G150400 chr3B 84.242 165 18 6 3 167 395846708 395846864 1.630000e-33 154.0
31 TraesCS6A01G150400 chr4A 88.811 143 13 3 81 222 589820719 589820859 4.490000e-39 172.0
32 TraesCS6A01G150400 chr4A 76.393 305 66 6 226 526 176546035 176546337 3.490000e-35 159.0
33 TraesCS6A01G150400 chr1A 83.908 174 17 8 3 176 121881949 121882111 4.520000e-34 156.0
34 TraesCS6A01G150400 chr7B 76.052 309 63 8 225 528 589705631 589705329 2.100000e-32 150.0
35 TraesCS6A01G150400 chr2B 88.119 101 6 5 3 103 621182236 621182142 7.670000e-22 115.0
36 TraesCS6A01G150400 chr2B 81.081 148 21 5 382 528 536833442 536833301 9.920000e-21 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G150400 chr6A 134201119 134204501 3382 False 6248.0 6248 100.000 1 3383 1 chr6A.!!$F1 3382
1 TraesCS6A01G150400 chr7A 47489258 47492055 2797 True 4710.0 4710 97.041 583 3383 1 chr7A.!!$R1 2800
2 TraesCS6A01G150400 chr7A 55408959 55411699 2740 True 4348.0 4348 95.046 582 3383 1 chr7A.!!$R2 2801
3 TraesCS6A01G150400 chr7A 164736468 164739260 2792 True 4246.0 4246 94.113 581 3381 1 chr7A.!!$R4 2800
4 TraesCS6A01G150400 chr7A 642166648 642168305 1657 False 2470.0 2470 93.709 1737 3383 1 chr7A.!!$F2 1646
5 TraesCS6A01G150400 chr7A 133611403 133612109 706 True 1072.0 1072 93.986 2672 3383 1 chr7A.!!$R3 711
6 TraesCS6A01G150400 chr2A 38526146 38528886 2740 True 4337.0 4337 94.975 582 3383 1 chr2A.!!$R1 2801
7 TraesCS6A01G150400 chr2A 764066997 764069709 2712 False 2174.0 4133 91.543 582 3299 2 chr2A.!!$F3 2717
8 TraesCS6A01G150400 chr5A 513856834 513859627 2793 False 4237.0 4237 94.045 582 3383 1 chr5A.!!$F3 2801
9 TraesCS6A01G150400 chr5A 402974416 402977201 2785 False 4207.0 4207 93.931 582 3383 1 chr5A.!!$F2 2801
10 TraesCS6A01G150400 chr5A 243925610 243928441 2831 False 4194.0 4194 93.607 582 3383 1 chr5A.!!$F1 2801
11 TraesCS6A01G150400 chr4D 440462632 440465461 2829 True 3882.0 3882 91.643 576 3383 1 chr4D.!!$R1 2807
12 TraesCS6A01G150400 chr7D 530864650 530867456 2806 True 3843.0 3843 91.529 582 3383 1 chr7D.!!$R1 2801
13 TraesCS6A01G150400 chr5D 443521254 443522425 1171 False 1827.0 1827 94.741 582 1759 1 chr5D.!!$F1 1177
14 TraesCS6A01G150400 chr3A 741371835 741373963 2128 True 1712.5 1716 96.384 1109 3366 2 chr3A.!!$R2 2257
15 TraesCS6A01G150400 chr3A 674546218 674547419 1201 True 1563.0 1563 90.278 2180 3383 1 chr3A.!!$R1 1203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
476 477 0.037232 AGTTTAGCAGGTCCGTCAGC 60.037 55.0 0.0 0.0 0.0 4.26 F
482 483 0.108138 GCAGGTCCGTCAGCAACTAT 60.108 55.0 0.0 0.0 0.0 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1686 1693 1.682854 CACAACACCTGACTTGGCATT 59.317 47.619 0.0 0.0 0.00 3.56 R
2840 3060 8.203681 TCTATGTCAGGCACTATCTACTACTA 57.796 38.462 0.0 0.0 36.02 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.137872 CGCGGGAGGGCTCGTTTA 62.138 66.667 0.00 0.00 41.04 2.01
40 41 2.504519 GCGGGAGGGCTCGTTTAT 59.495 61.111 0.00 0.00 41.04 1.40
41 42 1.153229 GCGGGAGGGCTCGTTTATT 60.153 57.895 0.00 0.00 41.04 1.40
42 43 0.746923 GCGGGAGGGCTCGTTTATTT 60.747 55.000 0.00 0.00 41.04 1.40
43 44 1.746470 CGGGAGGGCTCGTTTATTTT 58.254 50.000 0.00 0.00 31.99 1.82
44 45 2.089201 CGGGAGGGCTCGTTTATTTTT 58.911 47.619 0.00 0.00 31.99 1.94
66 67 4.728917 TTAACGGGACATGTTGTTTACG 57.271 40.909 14.58 9.30 0.00 3.18
67 68 2.529780 ACGGGACATGTTGTTTACGA 57.470 45.000 0.00 0.00 0.00 3.43
68 69 2.409975 ACGGGACATGTTGTTTACGAG 58.590 47.619 0.00 0.00 0.00 4.18
69 70 1.730064 CGGGACATGTTGTTTACGAGG 59.270 52.381 0.00 0.00 0.00 4.63
70 71 2.610976 CGGGACATGTTGTTTACGAGGA 60.611 50.000 0.00 0.00 0.00 3.71
71 72 3.606687 GGGACATGTTGTTTACGAGGAT 58.393 45.455 0.00 0.00 0.00 3.24
72 73 4.007659 GGGACATGTTGTTTACGAGGATT 58.992 43.478 0.00 0.00 0.00 3.01
73 74 4.142687 GGGACATGTTGTTTACGAGGATTG 60.143 45.833 0.00 0.00 0.00 2.67
74 75 4.454504 GGACATGTTGTTTACGAGGATTGT 59.545 41.667 0.00 0.00 36.17 2.71
75 76 5.640357 GGACATGTTGTTTACGAGGATTGTA 59.360 40.000 0.00 0.00 32.63 2.41
76 77 6.148150 GGACATGTTGTTTACGAGGATTGTAA 59.852 38.462 0.00 0.00 42.98 2.41
77 78 7.129109 ACATGTTGTTTACGAGGATTGTAAG 57.871 36.000 0.00 0.00 45.13 2.34
78 79 5.600908 TGTTGTTTACGAGGATTGTAAGC 57.399 39.130 0.00 0.00 45.13 3.09
79 80 4.453136 TGTTGTTTACGAGGATTGTAAGCC 59.547 41.667 0.00 0.00 45.13 4.35
80 81 4.274602 TGTTTACGAGGATTGTAAGCCA 57.725 40.909 1.39 0.00 45.13 4.75
81 82 4.643463 TGTTTACGAGGATTGTAAGCCAA 58.357 39.130 1.39 0.00 45.13 4.52
82 83 5.250200 TGTTTACGAGGATTGTAAGCCAAT 58.750 37.500 1.39 0.00 45.13 3.16
83 84 5.123186 TGTTTACGAGGATTGTAAGCCAATG 59.877 40.000 1.39 0.00 45.13 2.82
84 85 2.643551 ACGAGGATTGTAAGCCAATGG 58.356 47.619 0.00 0.00 43.87 3.16
85 86 3.992198 TACGAGGATTGTAAGCCAATGGC 60.992 47.826 18.04 18.04 43.87 4.40
86 87 6.440790 TACGAGGATTGTAAGCCAATGGCA 62.441 45.833 27.56 5.20 43.87 4.92
87 88 7.669027 TACGAGGATTGTAAGCCAATGGCAT 62.669 44.000 27.56 17.91 43.87 4.40
99 100 3.910568 CAATGGCATTGGTGGGTAATT 57.089 42.857 28.45 0.00 36.63 1.40
101 102 5.350504 CAATGGCATTGGTGGGTAATTAA 57.649 39.130 28.45 0.00 36.63 1.40
102 103 5.738909 CAATGGCATTGGTGGGTAATTAAA 58.261 37.500 28.45 0.00 36.63 1.52
103 104 5.612725 ATGGCATTGGTGGGTAATTAAAG 57.387 39.130 0.00 0.00 0.00 1.85
104 105 4.421131 TGGCATTGGTGGGTAATTAAAGT 58.579 39.130 0.00 0.00 0.00 2.66
105 106 5.580998 TGGCATTGGTGGGTAATTAAAGTA 58.419 37.500 0.00 0.00 0.00 2.24
106 107 6.198639 TGGCATTGGTGGGTAATTAAAGTAT 58.801 36.000 0.00 0.00 0.00 2.12
107 108 7.355101 TGGCATTGGTGGGTAATTAAAGTATA 58.645 34.615 0.00 0.00 0.00 1.47
108 109 7.839705 TGGCATTGGTGGGTAATTAAAGTATAA 59.160 33.333 0.00 0.00 0.00 0.98
109 110 8.697292 GGCATTGGTGGGTAATTAAAGTATAAA 58.303 33.333 0.00 0.00 0.00 1.40
134 135 8.592105 AACATGTTTGATGTTTTGGAGTAATG 57.408 30.769 4.92 0.00 38.97 1.90
135 136 7.725251 ACATGTTTGATGTTTTGGAGTAATGT 58.275 30.769 0.00 0.00 0.00 2.71
136 137 8.855110 ACATGTTTGATGTTTTGGAGTAATGTA 58.145 29.630 0.00 0.00 0.00 2.29
137 138 9.345517 CATGTTTGATGTTTTGGAGTAATGTAG 57.654 33.333 0.00 0.00 0.00 2.74
138 139 7.881142 TGTTTGATGTTTTGGAGTAATGTAGG 58.119 34.615 0.00 0.00 0.00 3.18
139 140 6.509418 TTGATGTTTTGGAGTAATGTAGGC 57.491 37.500 0.00 0.00 0.00 3.93
140 141 4.947388 TGATGTTTTGGAGTAATGTAGGCC 59.053 41.667 0.00 0.00 0.00 5.19
141 142 4.650972 TGTTTTGGAGTAATGTAGGCCT 57.349 40.909 11.78 11.78 0.00 5.19
142 143 4.993028 TGTTTTGGAGTAATGTAGGCCTT 58.007 39.130 12.58 0.00 0.00 4.35
143 144 5.007682 TGTTTTGGAGTAATGTAGGCCTTC 58.992 41.667 12.58 6.47 0.00 3.46
144 145 4.919774 TTTGGAGTAATGTAGGCCTTCA 57.080 40.909 12.58 14.05 0.00 3.02
145 146 4.487714 TTGGAGTAATGTAGGCCTTCAG 57.512 45.455 12.58 0.00 0.00 3.02
146 147 3.719871 TGGAGTAATGTAGGCCTTCAGA 58.280 45.455 12.58 0.83 0.00 3.27
147 148 4.298626 TGGAGTAATGTAGGCCTTCAGAT 58.701 43.478 12.58 8.20 0.00 2.90
148 149 4.721776 TGGAGTAATGTAGGCCTTCAGATT 59.278 41.667 12.58 6.88 0.00 2.40
149 150 5.059833 GGAGTAATGTAGGCCTTCAGATTG 58.940 45.833 12.58 0.00 0.00 2.67
150 151 4.455606 AGTAATGTAGGCCTTCAGATTGC 58.544 43.478 12.58 8.04 0.00 3.56
151 152 3.370840 AATGTAGGCCTTCAGATTGCA 57.629 42.857 12.58 0.00 0.00 4.08
152 153 2.408271 TGTAGGCCTTCAGATTGCAG 57.592 50.000 12.58 0.00 0.00 4.41
153 154 1.908619 TGTAGGCCTTCAGATTGCAGA 59.091 47.619 12.58 0.00 0.00 4.26
154 155 2.507058 TGTAGGCCTTCAGATTGCAGAT 59.493 45.455 12.58 0.00 0.00 2.90
155 156 2.822707 AGGCCTTCAGATTGCAGATT 57.177 45.000 0.00 0.00 0.00 2.40
156 157 3.097342 AGGCCTTCAGATTGCAGATTT 57.903 42.857 0.00 0.00 0.00 2.17
157 158 2.758979 AGGCCTTCAGATTGCAGATTTG 59.241 45.455 0.00 0.00 0.00 2.32
158 159 2.159142 GGCCTTCAGATTGCAGATTTGG 60.159 50.000 0.00 0.00 0.00 3.28
159 160 2.756760 GCCTTCAGATTGCAGATTTGGA 59.243 45.455 0.00 0.00 0.00 3.53
160 161 3.383825 GCCTTCAGATTGCAGATTTGGAT 59.616 43.478 0.00 0.00 0.00 3.41
161 162 4.736759 GCCTTCAGATTGCAGATTTGGATG 60.737 45.833 0.00 0.00 0.00 3.51
162 163 4.202121 CCTTCAGATTGCAGATTTGGATGG 60.202 45.833 0.00 0.00 0.00 3.51
163 164 4.239428 TCAGATTGCAGATTTGGATGGA 57.761 40.909 0.00 0.00 0.00 3.41
164 165 4.800023 TCAGATTGCAGATTTGGATGGAT 58.200 39.130 0.00 0.00 0.00 3.41
165 166 5.944135 TCAGATTGCAGATTTGGATGGATA 58.056 37.500 0.00 0.00 0.00 2.59
166 167 6.002082 TCAGATTGCAGATTTGGATGGATAG 58.998 40.000 0.00 0.00 0.00 2.08
167 168 5.183331 CAGATTGCAGATTTGGATGGATAGG 59.817 44.000 0.00 0.00 0.00 2.57
168 169 4.794311 TTGCAGATTTGGATGGATAGGA 57.206 40.909 0.00 0.00 0.00 2.94
169 170 5.329191 TTGCAGATTTGGATGGATAGGAT 57.671 39.130 0.00 0.00 0.00 3.24
170 171 4.659115 TGCAGATTTGGATGGATAGGATG 58.341 43.478 0.00 0.00 0.00 3.51
171 172 4.351704 TGCAGATTTGGATGGATAGGATGA 59.648 41.667 0.00 0.00 0.00 2.92
172 173 4.699257 GCAGATTTGGATGGATAGGATGAC 59.301 45.833 0.00 0.00 0.00 3.06
173 174 5.514484 GCAGATTTGGATGGATAGGATGACT 60.514 44.000 0.00 0.00 0.00 3.41
174 175 6.540995 CAGATTTGGATGGATAGGATGACTT 58.459 40.000 0.00 0.00 0.00 3.01
175 176 6.430308 CAGATTTGGATGGATAGGATGACTTG 59.570 42.308 0.00 0.00 0.00 3.16
176 177 5.715439 TTTGGATGGATAGGATGACTTGT 57.285 39.130 0.00 0.00 0.00 3.16
177 178 5.715439 TTGGATGGATAGGATGACTTGTT 57.285 39.130 0.00 0.00 0.00 2.83
178 179 5.296151 TGGATGGATAGGATGACTTGTTC 57.704 43.478 0.00 0.00 0.00 3.18
179 180 4.971282 TGGATGGATAGGATGACTTGTTCT 59.029 41.667 0.00 0.00 0.00 3.01
180 181 5.070981 TGGATGGATAGGATGACTTGTTCTC 59.929 44.000 0.00 0.00 0.00 2.87
181 182 5.512232 GGATGGATAGGATGACTTGTTCTCC 60.512 48.000 0.00 0.00 0.00 3.71
182 183 3.384789 TGGATAGGATGACTTGTTCTCCG 59.615 47.826 0.00 0.00 32.87 4.63
183 184 2.961526 TAGGATGACTTGTTCTCCGC 57.038 50.000 0.00 0.00 32.87 5.54
184 185 0.250513 AGGATGACTTGTTCTCCGCC 59.749 55.000 0.00 0.00 32.87 6.13
185 186 0.744771 GGATGACTTGTTCTCCGCCC 60.745 60.000 0.00 0.00 0.00 6.13
186 187 0.250513 GATGACTTGTTCTCCGCCCT 59.749 55.000 0.00 0.00 0.00 5.19
187 188 0.250513 ATGACTTGTTCTCCGCCCTC 59.749 55.000 0.00 0.00 0.00 4.30
188 189 1.079057 GACTTGTTCTCCGCCCTCC 60.079 63.158 0.00 0.00 0.00 4.30
189 190 2.269241 CTTGTTCTCCGCCCTCCC 59.731 66.667 0.00 0.00 0.00 4.30
190 191 2.203938 TTGTTCTCCGCCCTCCCT 60.204 61.111 0.00 0.00 0.00 4.20
191 192 1.842381 CTTGTTCTCCGCCCTCCCTT 61.842 60.000 0.00 0.00 0.00 3.95
192 193 1.423794 TTGTTCTCCGCCCTCCCTTT 61.424 55.000 0.00 0.00 0.00 3.11
193 194 1.078356 GTTCTCCGCCCTCCCTTTC 60.078 63.158 0.00 0.00 0.00 2.62
194 195 1.229529 TTCTCCGCCCTCCCTTTCT 60.230 57.895 0.00 0.00 0.00 2.52
195 196 0.840722 TTCTCCGCCCTCCCTTTCTT 60.841 55.000 0.00 0.00 0.00 2.52
196 197 0.840722 TCTCCGCCCTCCCTTTCTTT 60.841 55.000 0.00 0.00 0.00 2.52
197 198 0.038310 CTCCGCCCTCCCTTTCTTTT 59.962 55.000 0.00 0.00 0.00 2.27
198 199 1.280998 CTCCGCCCTCCCTTTCTTTTA 59.719 52.381 0.00 0.00 0.00 1.52
199 200 1.920351 TCCGCCCTCCCTTTCTTTTAT 59.080 47.619 0.00 0.00 0.00 1.40
200 201 3.116959 TCCGCCCTCCCTTTCTTTTATA 58.883 45.455 0.00 0.00 0.00 0.98
201 202 3.135895 TCCGCCCTCCCTTTCTTTTATAG 59.864 47.826 0.00 0.00 0.00 1.31
202 203 3.477530 CGCCCTCCCTTTCTTTTATAGG 58.522 50.000 0.00 0.00 0.00 2.57
211 212 7.926020 CCCTTTCTTTTATAGGGGTAGTAGA 57.074 40.000 0.00 0.00 44.11 2.59
212 213 8.507582 CCCTTTCTTTTATAGGGGTAGTAGAT 57.492 38.462 0.00 0.00 44.11 1.98
213 214 8.376270 CCCTTTCTTTTATAGGGGTAGTAGATG 58.624 40.741 0.00 0.00 44.11 2.90
214 215 9.155785 CCTTTCTTTTATAGGGGTAGTAGATGA 57.844 37.037 0.00 0.00 0.00 2.92
218 219 8.636213 TCTTTTATAGGGGTAGTAGATGAAACG 58.364 37.037 0.00 0.00 0.00 3.60
219 220 7.902920 TTTATAGGGGTAGTAGATGAAACGT 57.097 36.000 0.00 0.00 0.00 3.99
220 221 7.902920 TTATAGGGGTAGTAGATGAAACGTT 57.097 36.000 0.00 0.00 0.00 3.99
221 222 6.803366 ATAGGGGTAGTAGATGAAACGTTT 57.197 37.500 14.57 14.57 0.00 3.60
222 223 7.902920 ATAGGGGTAGTAGATGAAACGTTTA 57.097 36.000 14.65 3.15 0.00 2.01
223 224 6.610075 AGGGGTAGTAGATGAAACGTTTAA 57.390 37.500 14.65 7.11 0.00 1.52
224 225 7.008021 AGGGGTAGTAGATGAAACGTTTAAA 57.992 36.000 14.65 5.91 0.00 1.52
225 226 7.101700 AGGGGTAGTAGATGAAACGTTTAAAG 58.898 38.462 14.65 0.00 0.00 1.85
226 227 7.038799 AGGGGTAGTAGATGAAACGTTTAAAGA 60.039 37.037 14.65 0.00 0.00 2.52
227 228 7.767659 GGGGTAGTAGATGAAACGTTTAAAGAT 59.232 37.037 14.65 3.87 0.00 2.40
228 229 8.601476 GGGTAGTAGATGAAACGTTTAAAGATG 58.399 37.037 14.65 0.00 0.00 2.90
229 230 8.114905 GGTAGTAGATGAAACGTTTAAAGATGC 58.885 37.037 14.65 0.00 0.00 3.91
230 231 7.907214 AGTAGATGAAACGTTTAAAGATGCT 57.093 32.000 14.65 5.63 0.00 3.79
231 232 7.965045 AGTAGATGAAACGTTTAAAGATGCTC 58.035 34.615 14.65 0.00 0.00 4.26
232 233 6.801539 AGATGAAACGTTTAAAGATGCTCA 57.198 33.333 14.65 4.70 0.00 4.26
233 234 7.202016 AGATGAAACGTTTAAAGATGCTCAA 57.798 32.000 14.65 0.00 0.00 3.02
234 235 7.078228 AGATGAAACGTTTAAAGATGCTCAAC 58.922 34.615 14.65 3.41 0.00 3.18
235 236 5.516090 TGAAACGTTTAAAGATGCTCAACC 58.484 37.500 14.65 0.00 0.00 3.77
236 237 5.066634 TGAAACGTTTAAAGATGCTCAACCA 59.933 36.000 14.65 0.00 0.00 3.67
237 238 4.749245 ACGTTTAAAGATGCTCAACCAG 57.251 40.909 0.00 0.00 0.00 4.00
238 239 4.385825 ACGTTTAAAGATGCTCAACCAGA 58.614 39.130 0.00 0.00 0.00 3.86
239 240 5.003804 ACGTTTAAAGATGCTCAACCAGAT 58.996 37.500 0.00 0.00 0.00 2.90
240 241 5.122396 ACGTTTAAAGATGCTCAACCAGATC 59.878 40.000 0.00 0.00 0.00 2.75
241 242 5.122239 CGTTTAAAGATGCTCAACCAGATCA 59.878 40.000 0.00 0.00 0.00 2.92
242 243 6.183360 CGTTTAAAGATGCTCAACCAGATCAT 60.183 38.462 0.00 0.00 35.87 2.45
243 244 7.542025 GTTTAAAGATGCTCAACCAGATCATT 58.458 34.615 0.00 0.00 33.44 2.57
244 245 8.677300 GTTTAAAGATGCTCAACCAGATCATTA 58.323 33.333 0.00 0.00 33.44 1.90
245 246 8.985315 TTAAAGATGCTCAACCAGATCATTAT 57.015 30.769 0.00 0.00 33.44 1.28
246 247 6.879276 AAGATGCTCAACCAGATCATTATG 57.121 37.500 0.00 0.00 33.44 1.90
247 248 5.314529 AGATGCTCAACCAGATCATTATGG 58.685 41.667 0.00 0.00 42.60 2.74
248 249 4.776435 TGCTCAACCAGATCATTATGGA 57.224 40.909 5.76 0.00 39.02 3.41
249 250 4.711399 TGCTCAACCAGATCATTATGGAG 58.289 43.478 5.76 1.64 39.02 3.86
250 251 3.501445 GCTCAACCAGATCATTATGGAGC 59.499 47.826 5.76 7.45 39.02 4.70
251 252 4.746089 GCTCAACCAGATCATTATGGAGCT 60.746 45.833 14.23 0.00 39.02 4.09
259 260 6.622427 AGATCATTATGGAGCTGATCATGA 57.378 37.500 12.70 0.00 44.94 3.07
260 261 6.645306 AGATCATTATGGAGCTGATCATGAG 58.355 40.000 12.70 0.00 44.94 2.90
261 262 5.820404 TCATTATGGAGCTGATCATGAGT 57.180 39.130 0.09 0.00 0.00 3.41
262 263 6.183810 TCATTATGGAGCTGATCATGAGTT 57.816 37.500 0.09 0.00 0.00 3.01
263 264 6.598503 TCATTATGGAGCTGATCATGAGTTT 58.401 36.000 0.09 0.00 0.00 2.66
264 265 6.709397 TCATTATGGAGCTGATCATGAGTTTC 59.291 38.462 0.09 0.00 0.00 2.78
265 266 4.774660 ATGGAGCTGATCATGAGTTTCT 57.225 40.909 0.09 0.00 0.00 2.52
266 267 4.134379 TGGAGCTGATCATGAGTTTCTC 57.866 45.455 0.09 5.53 0.00 2.87
267 268 3.516700 TGGAGCTGATCATGAGTTTCTCA 59.483 43.478 0.09 1.92 44.99 3.27
268 269 4.019950 TGGAGCTGATCATGAGTTTCTCAA 60.020 41.667 0.09 0.00 44.04 3.02
269 270 5.124645 GGAGCTGATCATGAGTTTCTCAAT 58.875 41.667 0.09 0.00 44.04 2.57
270 271 5.007823 GGAGCTGATCATGAGTTTCTCAATG 59.992 44.000 0.09 3.97 44.04 2.82
271 272 4.335874 AGCTGATCATGAGTTTCTCAATGC 59.664 41.667 0.09 0.83 44.04 3.56
272 273 4.497674 GCTGATCATGAGTTTCTCAATGCC 60.498 45.833 0.09 0.00 44.04 4.40
273 274 3.624410 TGATCATGAGTTTCTCAATGCCG 59.376 43.478 0.09 0.00 44.04 5.69
274 275 3.333029 TCATGAGTTTCTCAATGCCGA 57.667 42.857 3.58 0.00 44.04 5.54
275 276 3.673902 TCATGAGTTTCTCAATGCCGAA 58.326 40.909 3.58 0.00 44.04 4.30
276 277 4.264253 TCATGAGTTTCTCAATGCCGAAT 58.736 39.130 3.58 0.00 44.04 3.34
277 278 4.701651 TCATGAGTTTCTCAATGCCGAATT 59.298 37.500 3.58 0.00 44.04 2.17
278 279 5.183713 TCATGAGTTTCTCAATGCCGAATTT 59.816 36.000 3.58 0.00 44.04 1.82
279 280 4.797471 TGAGTTTCTCAATGCCGAATTTG 58.203 39.130 0.00 0.00 37.57 2.32
280 281 4.518590 TGAGTTTCTCAATGCCGAATTTGA 59.481 37.500 0.00 0.00 37.57 2.69
281 282 5.183713 TGAGTTTCTCAATGCCGAATTTGAT 59.816 36.000 0.00 0.00 37.57 2.57
282 283 5.404946 AGTTTCTCAATGCCGAATTTGATG 58.595 37.500 0.00 0.00 0.00 3.07
283 284 5.183713 AGTTTCTCAATGCCGAATTTGATGA 59.816 36.000 0.00 0.00 0.00 2.92
284 285 5.840243 TTCTCAATGCCGAATTTGATGAT 57.160 34.783 0.00 0.00 0.00 2.45
285 286 5.177725 TCTCAATGCCGAATTTGATGATG 57.822 39.130 0.00 0.00 0.00 3.07
286 287 4.883006 TCTCAATGCCGAATTTGATGATGA 59.117 37.500 0.00 0.00 0.00 2.92
287 288 5.357596 TCTCAATGCCGAATTTGATGATGAA 59.642 36.000 0.00 0.00 0.00 2.57
288 289 6.040054 TCTCAATGCCGAATTTGATGATGAAT 59.960 34.615 0.00 0.00 0.00 2.57
289 290 6.575267 TCAATGCCGAATTTGATGATGAATT 58.425 32.000 0.00 0.00 0.00 2.17
290 291 7.042950 TCAATGCCGAATTTGATGATGAATTT 58.957 30.769 0.00 0.00 0.00 1.82
291 292 6.838198 ATGCCGAATTTGATGATGAATTTG 57.162 33.333 0.00 0.00 0.00 2.32
292 293 5.110598 TGCCGAATTTGATGATGAATTTGG 58.889 37.500 9.66 9.66 44.41 3.28
293 294 5.105432 TGCCGAATTTGATGATGAATTTGGA 60.105 36.000 15.78 2.82 44.37 3.53
294 295 5.987347 GCCGAATTTGATGATGAATTTGGAT 59.013 36.000 15.78 0.00 44.37 3.41
295 296 7.147312 GCCGAATTTGATGATGAATTTGGATA 58.853 34.615 15.78 0.00 44.37 2.59
296 297 7.652909 GCCGAATTTGATGATGAATTTGGATAA 59.347 33.333 15.78 0.00 44.37 1.75
297 298 9.531942 CCGAATTTGATGATGAATTTGGATAAA 57.468 29.630 8.70 0.00 44.37 1.40
311 312 8.545229 AATTTGGATAAAATTCGCAAATGTCA 57.455 26.923 0.00 0.00 43.57 3.58
312 313 6.942886 TTGGATAAAATTCGCAAATGTCAC 57.057 33.333 0.00 0.00 0.00 3.67
313 314 5.406649 TGGATAAAATTCGCAAATGTCACC 58.593 37.500 0.00 0.00 0.00 4.02
314 315 5.047731 TGGATAAAATTCGCAAATGTCACCA 60.048 36.000 0.00 0.00 0.00 4.17
315 316 5.516339 GGATAAAATTCGCAAATGTCACCAG 59.484 40.000 0.00 0.00 0.00 4.00
316 317 4.582701 AAAATTCGCAAATGTCACCAGA 57.417 36.364 0.00 0.00 0.00 3.86
317 318 4.789012 AAATTCGCAAATGTCACCAGAT 57.211 36.364 0.00 0.00 0.00 2.90
318 319 4.789012 AATTCGCAAATGTCACCAGATT 57.211 36.364 0.00 0.00 0.00 2.40
319 320 3.829886 TTCGCAAATGTCACCAGATTC 57.170 42.857 0.00 0.00 0.00 2.52
320 321 3.057969 TCGCAAATGTCACCAGATTCT 57.942 42.857 0.00 0.00 0.00 2.40
321 322 2.743664 TCGCAAATGTCACCAGATTCTG 59.256 45.455 6.70 6.70 0.00 3.02
322 323 2.730090 CGCAAATGTCACCAGATTCTGC 60.730 50.000 8.23 0.00 0.00 4.26
323 324 2.490903 GCAAATGTCACCAGATTCTGCT 59.509 45.455 8.23 0.00 0.00 4.24
324 325 3.427233 GCAAATGTCACCAGATTCTGCTC 60.427 47.826 8.23 0.00 0.00 4.26
325 326 3.996921 AATGTCACCAGATTCTGCTCT 57.003 42.857 8.23 0.00 0.00 4.09
326 327 5.181009 CAAATGTCACCAGATTCTGCTCTA 58.819 41.667 8.23 0.00 0.00 2.43
327 328 4.669206 ATGTCACCAGATTCTGCTCTAG 57.331 45.455 8.23 0.00 0.00 2.43
328 329 3.701664 TGTCACCAGATTCTGCTCTAGA 58.298 45.455 8.23 0.00 0.00 2.43
339 340 3.112965 GCTCTAGAAGCCGGTAGGA 57.887 57.895 1.90 0.00 45.92 2.94
340 341 1.623163 GCTCTAGAAGCCGGTAGGAT 58.377 55.000 1.90 0.00 45.92 3.24
341 342 1.542472 GCTCTAGAAGCCGGTAGGATC 59.458 57.143 1.90 0.00 45.92 3.36
342 343 2.865079 CTCTAGAAGCCGGTAGGATCA 58.135 52.381 1.90 0.00 41.02 2.92
343 344 2.554893 CTCTAGAAGCCGGTAGGATCAC 59.445 54.545 1.90 0.00 41.02 3.06
344 345 1.614413 CTAGAAGCCGGTAGGATCACC 59.386 57.143 1.90 0.00 41.02 4.02
345 346 1.049289 AGAAGCCGGTAGGATCACCC 61.049 60.000 1.90 0.00 41.02 4.61
346 347 1.306654 AAGCCGGTAGGATCACCCA 60.307 57.895 1.90 0.00 41.02 4.51
347 348 1.623542 AAGCCGGTAGGATCACCCAC 61.624 60.000 1.90 0.00 41.02 4.61
348 349 2.363975 GCCGGTAGGATCACCCACA 61.364 63.158 1.90 0.00 41.02 4.17
349 350 1.696097 GCCGGTAGGATCACCCACAT 61.696 60.000 1.90 0.00 41.02 3.21
350 351 0.837272 CCGGTAGGATCACCCACATT 59.163 55.000 0.00 0.00 41.02 2.71
351 352 1.211949 CCGGTAGGATCACCCACATTT 59.788 52.381 0.00 0.00 41.02 2.32
352 353 2.356741 CCGGTAGGATCACCCACATTTT 60.357 50.000 0.00 0.00 41.02 1.82
353 354 2.682856 CGGTAGGATCACCCACATTTTG 59.317 50.000 0.00 0.00 37.41 2.44
354 355 3.621214 CGGTAGGATCACCCACATTTTGA 60.621 47.826 0.00 0.00 37.41 2.69
355 356 4.340617 GGTAGGATCACCCACATTTTGAA 58.659 43.478 0.00 0.00 37.41 2.69
356 357 4.770010 GGTAGGATCACCCACATTTTGAAA 59.230 41.667 0.00 0.00 37.41 2.69
357 358 5.245075 GGTAGGATCACCCACATTTTGAAAA 59.755 40.000 0.00 0.00 37.41 2.29
358 359 6.070824 GGTAGGATCACCCACATTTTGAAAAT 60.071 38.462 0.00 0.00 37.41 1.82
359 360 6.438186 AGGATCACCCACATTTTGAAAATT 57.562 33.333 0.00 0.00 37.41 1.82
360 361 6.466812 AGGATCACCCACATTTTGAAAATTC 58.533 36.000 0.00 0.00 37.41 2.17
361 362 6.043012 AGGATCACCCACATTTTGAAAATTCA 59.957 34.615 0.00 0.00 37.41 2.57
362 363 6.369615 GGATCACCCACATTTTGAAAATTCAG 59.630 38.462 0.00 0.00 35.04 3.02
363 364 6.477053 TCACCCACATTTTGAAAATTCAGA 57.523 33.333 0.00 0.00 38.61 3.27
364 365 7.065120 TCACCCACATTTTGAAAATTCAGAT 57.935 32.000 0.00 0.00 38.61 2.90
365 366 7.153985 TCACCCACATTTTGAAAATTCAGATC 58.846 34.615 0.00 0.00 38.61 2.75
366 367 6.930164 CACCCACATTTTGAAAATTCAGATCA 59.070 34.615 0.00 0.00 38.61 2.92
367 368 7.604927 CACCCACATTTTGAAAATTCAGATCAT 59.395 33.333 0.00 0.00 38.61 2.45
368 369 7.604927 ACCCACATTTTGAAAATTCAGATCATG 59.395 33.333 0.00 0.00 38.61 3.07
369 370 7.065324 CCCACATTTTGAAAATTCAGATCATGG 59.935 37.037 0.00 4.08 38.61 3.66
370 371 7.413657 CCACATTTTGAAAATTCAGATCATGGC 60.414 37.037 0.00 0.00 38.61 4.40
371 372 6.311935 ACATTTTGAAAATTCAGATCATGGCG 59.688 34.615 0.00 0.00 38.61 5.69
372 373 5.641783 TTTGAAAATTCAGATCATGGCGA 57.358 34.783 0.00 0.00 38.61 5.54
373 374 5.641783 TTGAAAATTCAGATCATGGCGAA 57.358 34.783 0.00 0.00 38.61 4.70
374 375 4.985413 TGAAAATTCAGATCATGGCGAAC 58.015 39.130 0.00 0.00 32.50 3.95
375 376 4.701651 TGAAAATTCAGATCATGGCGAACT 59.298 37.500 0.00 0.00 32.50 3.01
376 377 4.889832 AAATTCAGATCATGGCGAACTC 57.110 40.909 0.00 0.00 0.00 3.01
377 378 2.315925 TTCAGATCATGGCGAACTCC 57.684 50.000 0.00 0.00 0.00 3.85
378 379 1.194218 TCAGATCATGGCGAACTCCA 58.806 50.000 0.00 0.00 40.97 3.86
383 384 4.963878 ATGGCGAACTCCATGACC 57.036 55.556 0.00 0.00 44.72 4.02
384 385 1.224592 ATGGCGAACTCCATGACCC 59.775 57.895 0.00 0.00 44.72 4.46
385 386 1.274703 ATGGCGAACTCCATGACCCT 61.275 55.000 0.00 0.00 44.72 4.34
386 387 1.153349 GGCGAACTCCATGACCCTC 60.153 63.158 0.00 0.00 0.00 4.30
387 388 1.596934 GCGAACTCCATGACCCTCA 59.403 57.895 0.00 0.00 0.00 3.86
388 389 0.179000 GCGAACTCCATGACCCTCAT 59.821 55.000 0.00 0.00 37.65 2.90
389 390 1.808133 GCGAACTCCATGACCCTCATC 60.808 57.143 0.00 0.00 34.28 2.92
390 391 1.202580 CGAACTCCATGACCCTCATCC 60.203 57.143 0.00 0.00 34.28 3.51
391 392 2.122768 GAACTCCATGACCCTCATCCT 58.877 52.381 0.00 0.00 34.28 3.24
392 393 1.799933 ACTCCATGACCCTCATCCTC 58.200 55.000 0.00 0.00 34.28 3.71
393 394 1.055040 CTCCATGACCCTCATCCTCC 58.945 60.000 0.00 0.00 34.28 4.30
394 395 0.343018 TCCATGACCCTCATCCTCCA 59.657 55.000 0.00 0.00 34.28 3.86
395 396 0.471617 CCATGACCCTCATCCTCCAC 59.528 60.000 0.00 0.00 34.28 4.02
396 397 1.206878 CATGACCCTCATCCTCCACA 58.793 55.000 0.00 0.00 34.28 4.17
397 398 1.561076 CATGACCCTCATCCTCCACAA 59.439 52.381 0.00 0.00 34.28 3.33
398 399 1.971149 TGACCCTCATCCTCCACAAT 58.029 50.000 0.00 0.00 0.00 2.71
399 400 1.839994 TGACCCTCATCCTCCACAATC 59.160 52.381 0.00 0.00 0.00 2.67
400 401 1.839994 GACCCTCATCCTCCACAATCA 59.160 52.381 0.00 0.00 0.00 2.57
401 402 2.441001 GACCCTCATCCTCCACAATCAT 59.559 50.000 0.00 0.00 0.00 2.45
402 403 2.174210 ACCCTCATCCTCCACAATCATG 59.826 50.000 0.00 0.00 0.00 3.07
403 404 2.174210 CCCTCATCCTCCACAATCATGT 59.826 50.000 0.00 0.00 41.61 3.21
404 405 3.372349 CCCTCATCCTCCACAATCATGTT 60.372 47.826 0.00 0.00 37.82 2.71
405 406 3.630769 CCTCATCCTCCACAATCATGTTG 59.369 47.826 0.00 0.00 37.82 3.33
406 407 4.267536 CTCATCCTCCACAATCATGTTGT 58.732 43.478 7.56 7.56 37.82 3.32
407 408 4.011698 TCATCCTCCACAATCATGTTGTG 58.988 43.478 23.21 23.21 46.79 3.33
408 409 3.507162 TCCTCCACAATCATGTTGTGT 57.493 42.857 25.68 13.49 46.05 3.72
409 410 4.632327 TCCTCCACAATCATGTTGTGTA 57.368 40.909 25.68 16.86 46.05 2.90
410 411 5.178096 TCCTCCACAATCATGTTGTGTAT 57.822 39.130 25.68 0.00 46.05 2.29
411 412 4.943093 TCCTCCACAATCATGTTGTGTATG 59.057 41.667 25.68 18.69 46.05 2.39
412 413 4.943093 CCTCCACAATCATGTTGTGTATGA 59.057 41.667 25.68 19.06 46.05 2.15
413 414 5.591472 CCTCCACAATCATGTTGTGTATGAT 59.409 40.000 25.68 0.00 46.05 2.45
414 415 6.238566 CCTCCACAATCATGTTGTGTATGATC 60.239 42.308 25.68 0.00 46.05 2.92
415 416 6.179040 TCCACAATCATGTTGTGTATGATCA 58.821 36.000 25.68 0.00 46.05 2.92
416 417 6.093909 TCCACAATCATGTTGTGTATGATCAC 59.906 38.462 25.68 0.00 46.05 3.06
417 418 6.127952 CCACAATCATGTTGTGTATGATCACA 60.128 38.462 25.68 0.00 46.05 3.58
418 419 6.744082 CACAATCATGTTGTGTATGATCACAC 59.256 38.462 22.45 9.04 46.04 3.82
426 427 4.928661 GTGTATGATCACACAACCTGTC 57.071 45.455 8.72 0.00 46.55 3.51
427 428 4.314961 GTGTATGATCACACAACCTGTCA 58.685 43.478 8.72 0.00 46.55 3.58
428 429 4.937620 GTGTATGATCACACAACCTGTCAT 59.062 41.667 8.72 0.00 46.55 3.06
429 430 5.063944 GTGTATGATCACACAACCTGTCATC 59.936 44.000 8.72 0.00 46.55 2.92
430 431 3.767902 TGATCACACAACCTGTCATCA 57.232 42.857 0.00 0.00 0.00 3.07
431 432 3.402110 TGATCACACAACCTGTCATCAC 58.598 45.455 0.00 0.00 0.00 3.06
432 433 2.254546 TCACACAACCTGTCATCACC 57.745 50.000 0.00 0.00 0.00 4.02
433 434 1.768275 TCACACAACCTGTCATCACCT 59.232 47.619 0.00 0.00 0.00 4.00
434 435 2.146342 CACACAACCTGTCATCACCTC 58.854 52.381 0.00 0.00 0.00 3.85
435 436 1.072331 ACACAACCTGTCATCACCTCC 59.928 52.381 0.00 0.00 0.00 4.30
436 437 0.693049 ACAACCTGTCATCACCTCCC 59.307 55.000 0.00 0.00 0.00 4.30
437 438 0.692476 CAACCTGTCATCACCTCCCA 59.308 55.000 0.00 0.00 0.00 4.37
438 439 1.283029 CAACCTGTCATCACCTCCCAT 59.717 52.381 0.00 0.00 0.00 4.00
439 440 2.505407 CAACCTGTCATCACCTCCCATA 59.495 50.000 0.00 0.00 0.00 2.74
440 441 2.845659 ACCTGTCATCACCTCCCATAA 58.154 47.619 0.00 0.00 0.00 1.90
441 442 3.397527 ACCTGTCATCACCTCCCATAAT 58.602 45.455 0.00 0.00 0.00 1.28
442 443 3.137176 ACCTGTCATCACCTCCCATAATG 59.863 47.826 0.00 0.00 0.00 1.90
443 444 3.137176 CCTGTCATCACCTCCCATAATGT 59.863 47.826 0.00 0.00 0.00 2.71
444 445 4.384056 CTGTCATCACCTCCCATAATGTC 58.616 47.826 0.00 0.00 0.00 3.06
445 446 4.040047 TGTCATCACCTCCCATAATGTCT 58.960 43.478 0.00 0.00 0.00 3.41
446 447 4.101585 TGTCATCACCTCCCATAATGTCTC 59.898 45.833 0.00 0.00 0.00 3.36
447 448 4.346418 GTCATCACCTCCCATAATGTCTCT 59.654 45.833 0.00 0.00 0.00 3.10
448 449 4.346127 TCATCACCTCCCATAATGTCTCTG 59.654 45.833 0.00 0.00 0.00 3.35
449 450 3.041211 TCACCTCCCATAATGTCTCTGG 58.959 50.000 0.00 0.00 0.00 3.86
450 451 3.041211 CACCTCCCATAATGTCTCTGGA 58.959 50.000 0.00 0.00 31.38 3.86
451 452 3.649981 CACCTCCCATAATGTCTCTGGAT 59.350 47.826 0.00 0.00 31.38 3.41
452 453 3.906846 ACCTCCCATAATGTCTCTGGATC 59.093 47.826 0.00 0.00 31.38 3.36
453 454 3.262915 CCTCCCATAATGTCTCTGGATCC 59.737 52.174 4.20 4.20 31.38 3.36
454 455 3.251484 TCCCATAATGTCTCTGGATCCC 58.749 50.000 9.90 0.00 31.38 3.85
455 456 2.027745 CCCATAATGTCTCTGGATCCCG 60.028 54.545 9.90 2.27 31.38 5.14
456 457 2.634940 CCATAATGTCTCTGGATCCCGT 59.365 50.000 9.90 0.00 31.38 5.28
457 458 3.832490 CCATAATGTCTCTGGATCCCGTA 59.168 47.826 9.90 0.00 31.38 4.02
458 459 4.081972 CCATAATGTCTCTGGATCCCGTAG 60.082 50.000 9.90 3.98 31.38 3.51
459 460 2.757894 ATGTCTCTGGATCCCGTAGT 57.242 50.000 9.90 0.00 0.00 2.73
460 461 2.526888 TGTCTCTGGATCCCGTAGTT 57.473 50.000 9.90 0.00 0.00 2.24
461 462 2.816411 TGTCTCTGGATCCCGTAGTTT 58.184 47.619 9.90 0.00 0.00 2.66
462 463 3.972133 TGTCTCTGGATCCCGTAGTTTA 58.028 45.455 9.90 0.00 0.00 2.01
463 464 3.952323 TGTCTCTGGATCCCGTAGTTTAG 59.048 47.826 9.90 0.00 0.00 1.85
464 465 2.957006 TCTCTGGATCCCGTAGTTTAGC 59.043 50.000 9.90 0.00 0.00 3.09
465 466 2.693591 CTCTGGATCCCGTAGTTTAGCA 59.306 50.000 9.90 0.00 0.00 3.49
466 467 2.693591 TCTGGATCCCGTAGTTTAGCAG 59.306 50.000 9.90 0.00 0.00 4.24
467 468 1.760613 TGGATCCCGTAGTTTAGCAGG 59.239 52.381 9.90 0.00 0.00 4.85
468 469 1.761198 GGATCCCGTAGTTTAGCAGGT 59.239 52.381 0.00 0.00 0.00 4.00
469 470 2.223994 GGATCCCGTAGTTTAGCAGGTC 60.224 54.545 0.00 0.00 0.00 3.85
470 471 1.188863 TCCCGTAGTTTAGCAGGTCC 58.811 55.000 0.00 0.00 0.00 4.46
471 472 0.179119 CCCGTAGTTTAGCAGGTCCG 60.179 60.000 0.00 0.00 0.00 4.79
472 473 0.529378 CCGTAGTTTAGCAGGTCCGT 59.471 55.000 0.00 0.00 0.00 4.69
473 474 1.468736 CCGTAGTTTAGCAGGTCCGTC 60.469 57.143 0.00 0.00 0.00 4.79
474 475 1.200716 CGTAGTTTAGCAGGTCCGTCA 59.799 52.381 0.00 0.00 0.00 4.35
475 476 2.731341 CGTAGTTTAGCAGGTCCGTCAG 60.731 54.545 0.00 0.00 0.00 3.51
476 477 0.037232 AGTTTAGCAGGTCCGTCAGC 60.037 55.000 0.00 0.00 0.00 4.26
477 478 0.320421 GTTTAGCAGGTCCGTCAGCA 60.320 55.000 0.00 0.00 0.00 4.41
478 479 0.394938 TTTAGCAGGTCCGTCAGCAA 59.605 50.000 0.00 0.00 0.00 3.91
479 480 0.320421 TTAGCAGGTCCGTCAGCAAC 60.320 55.000 0.00 0.00 0.00 4.17
480 481 1.185618 TAGCAGGTCCGTCAGCAACT 61.186 55.000 0.00 0.00 0.00 3.16
481 482 1.185618 AGCAGGTCCGTCAGCAACTA 61.186 55.000 0.00 0.00 0.00 2.24
482 483 0.108138 GCAGGTCCGTCAGCAACTAT 60.108 55.000 0.00 0.00 0.00 2.12
483 484 1.136305 GCAGGTCCGTCAGCAACTATA 59.864 52.381 0.00 0.00 0.00 1.31
484 485 2.418197 GCAGGTCCGTCAGCAACTATAA 60.418 50.000 0.00 0.00 0.00 0.98
485 486 3.857052 CAGGTCCGTCAGCAACTATAAA 58.143 45.455 0.00 0.00 0.00 1.40
486 487 3.865745 CAGGTCCGTCAGCAACTATAAAG 59.134 47.826 0.00 0.00 0.00 1.85
487 488 3.514309 AGGTCCGTCAGCAACTATAAAGT 59.486 43.478 0.00 0.00 37.65 2.66
488 489 3.617263 GGTCCGTCAGCAACTATAAAGTG 59.383 47.826 0.00 0.00 35.62 3.16
489 490 3.617263 GTCCGTCAGCAACTATAAAGTGG 59.383 47.826 0.00 0.00 35.62 4.00
490 491 2.936498 CCGTCAGCAACTATAAAGTGGG 59.064 50.000 0.00 0.00 35.62 4.61
491 492 2.351726 CGTCAGCAACTATAAAGTGGGC 59.648 50.000 0.00 0.00 35.62 5.36
492 493 3.610911 GTCAGCAACTATAAAGTGGGCT 58.389 45.455 0.00 0.00 43.93 5.19
493 494 4.010349 GTCAGCAACTATAAAGTGGGCTT 58.990 43.478 3.12 0.00 41.75 4.35
494 495 4.009675 TCAGCAACTATAAAGTGGGCTTG 58.990 43.478 3.12 1.40 41.75 4.01
495 496 3.129287 CAGCAACTATAAAGTGGGCTTGG 59.871 47.826 3.12 0.00 41.75 3.61
496 497 3.010138 AGCAACTATAAAGTGGGCTTGGA 59.990 43.478 0.00 0.00 41.75 3.53
497 498 3.378427 GCAACTATAAAGTGGGCTTGGAG 59.622 47.826 0.00 0.00 35.62 3.86
498 499 3.283259 ACTATAAAGTGGGCTTGGAGC 57.717 47.619 0.00 0.00 35.88 4.70
499 500 2.576191 ACTATAAAGTGGGCTTGGAGCA 59.424 45.455 2.04 0.00 37.51 4.26
514 515 2.453983 GAGCACTCCATATGCCTCTC 57.546 55.000 0.00 0.00 44.53 3.20
515 516 1.001860 GAGCACTCCATATGCCTCTCC 59.998 57.143 0.00 0.00 44.53 3.71
516 517 0.761187 GCACTCCATATGCCTCTCCA 59.239 55.000 0.00 0.00 37.08 3.86
517 518 1.542108 GCACTCCATATGCCTCTCCAC 60.542 57.143 0.00 0.00 37.08 4.02
518 519 1.764723 CACTCCATATGCCTCTCCACA 59.235 52.381 0.00 0.00 0.00 4.17
519 520 2.371179 CACTCCATATGCCTCTCCACAT 59.629 50.000 0.00 0.00 0.00 3.21
520 521 2.636893 ACTCCATATGCCTCTCCACATC 59.363 50.000 0.00 0.00 0.00 3.06
521 522 1.980765 TCCATATGCCTCTCCACATCC 59.019 52.381 0.00 0.00 0.00 3.51
522 523 1.983691 CCATATGCCTCTCCACATCCT 59.016 52.381 0.00 0.00 0.00 3.24
523 524 2.374504 CCATATGCCTCTCCACATCCTT 59.625 50.000 0.00 0.00 0.00 3.36
524 525 3.181436 CCATATGCCTCTCCACATCCTTT 60.181 47.826 0.00 0.00 0.00 3.11
525 526 2.725221 ATGCCTCTCCACATCCTTTC 57.275 50.000 0.00 0.00 0.00 2.62
526 527 1.661463 TGCCTCTCCACATCCTTTCT 58.339 50.000 0.00 0.00 0.00 2.52
527 528 2.832838 TGCCTCTCCACATCCTTTCTA 58.167 47.619 0.00 0.00 0.00 2.10
528 529 2.501723 TGCCTCTCCACATCCTTTCTAC 59.498 50.000 0.00 0.00 0.00 2.59
529 530 2.158885 GCCTCTCCACATCCTTTCTACC 60.159 54.545 0.00 0.00 0.00 3.18
530 531 3.107601 CCTCTCCACATCCTTTCTACCA 58.892 50.000 0.00 0.00 0.00 3.25
531 532 3.133721 CCTCTCCACATCCTTTCTACCAG 59.866 52.174 0.00 0.00 0.00 4.00
532 533 4.026744 CTCTCCACATCCTTTCTACCAGA 58.973 47.826 0.00 0.00 0.00 3.86
533 534 4.624913 TCTCCACATCCTTTCTACCAGAT 58.375 43.478 0.00 0.00 0.00 2.90
534 535 5.032846 TCTCCACATCCTTTCTACCAGATT 58.967 41.667 0.00 0.00 0.00 2.40
535 536 5.102953 TCCACATCCTTTCTACCAGATTG 57.897 43.478 0.00 0.00 0.00 2.67
536 537 4.536090 TCCACATCCTTTCTACCAGATTGT 59.464 41.667 0.00 0.00 0.00 2.71
537 538 5.014123 TCCACATCCTTTCTACCAGATTGTT 59.986 40.000 0.00 0.00 0.00 2.83
538 539 5.124457 CCACATCCTTTCTACCAGATTGTTG 59.876 44.000 0.00 0.00 0.00 3.33
539 540 5.707298 CACATCCTTTCTACCAGATTGTTGT 59.293 40.000 0.00 0.00 0.00 3.32
540 541 6.207417 CACATCCTTTCTACCAGATTGTTGTT 59.793 38.462 0.00 0.00 0.00 2.83
541 542 6.207417 ACATCCTTTCTACCAGATTGTTGTTG 59.793 38.462 0.00 0.00 0.00 3.33
542 543 5.690865 TCCTTTCTACCAGATTGTTGTTGT 58.309 37.500 0.00 0.00 0.00 3.32
543 544 6.126409 TCCTTTCTACCAGATTGTTGTTGTT 58.874 36.000 0.00 0.00 0.00 2.83
544 545 6.605594 TCCTTTCTACCAGATTGTTGTTGTTT 59.394 34.615 0.00 0.00 0.00 2.83
545 546 7.123547 TCCTTTCTACCAGATTGTTGTTGTTTT 59.876 33.333 0.00 0.00 0.00 2.43
546 547 7.763985 CCTTTCTACCAGATTGTTGTTGTTTTT 59.236 33.333 0.00 0.00 0.00 1.94
615 616 2.507407 AACTACCACATTTGCCGGAT 57.493 45.000 5.05 0.00 0.00 4.18
1156 1161 3.716601 AGTTGCTTTTGGTTTGATTCGG 58.283 40.909 0.00 0.00 0.00 4.30
1229 1234 4.284490 TGGTTCTTACACTGAATCTGAGCT 59.716 41.667 0.00 0.00 0.00 4.09
1427 1432 2.566724 TGGTGCAGAGATGTGTGATGTA 59.433 45.455 0.00 0.00 0.00 2.29
1575 1580 6.033341 GCAGAGATCTTTAGTGTACTGTGAG 58.967 44.000 0.00 0.00 0.00 3.51
1777 1812 7.681679 TGATGTAGGTGTGAACTTTGGTTATA 58.318 34.615 0.00 0.00 35.58 0.98
2110 2150 6.006275 ACTATACCAGTCAGGCAATCAATT 57.994 37.500 0.00 0.00 43.14 2.32
2533 2576 8.039538 AGGTACTGTTATGGTTTAAGAACTAGC 58.960 37.037 0.00 0.00 37.18 3.42
2839 3059 7.038659 AGATAGTGTCTGACATAGAAAGCAAC 58.961 38.462 14.37 0.00 37.12 4.17
2840 3060 5.220710 AGTGTCTGACATAGAAAGCAACT 57.779 39.130 14.37 0.00 37.12 3.16
2864 3084 8.098286 ACTAGTAGTAGATAGTGCCTGACATAG 58.902 40.741 11.68 0.00 31.09 2.23
3008 3264 3.586618 ACTCCTCCTTCTTCAGCATCTTT 59.413 43.478 0.00 0.00 0.00 2.52
3346 3605 2.268022 ACTCGCCGTCAGAGTCATT 58.732 52.632 0.00 0.00 44.87 2.57
3350 3609 2.089201 TCGCCGTCAGAGTCATTAGAA 58.911 47.619 0.00 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.918230 AATAAACGAGCCCTCCCGCG 62.918 60.000 0.00 0.00 0.00 6.46
23 24 0.746923 AAATAAACGAGCCCTCCCGC 60.747 55.000 0.00 0.00 0.00 6.13
24 25 1.746470 AAAATAAACGAGCCCTCCCG 58.254 50.000 0.00 0.00 0.00 5.14
42 43 5.970023 CGTAAACAACATGTCCCGTTAAAAA 59.030 36.000 0.00 0.00 0.00 1.94
43 44 5.295292 TCGTAAACAACATGTCCCGTTAAAA 59.705 36.000 0.00 0.00 0.00 1.52
44 45 4.813161 TCGTAAACAACATGTCCCGTTAAA 59.187 37.500 0.00 0.00 0.00 1.52
45 46 4.375272 TCGTAAACAACATGTCCCGTTAA 58.625 39.130 0.00 0.00 0.00 2.01
46 47 3.987547 TCGTAAACAACATGTCCCGTTA 58.012 40.909 0.00 0.00 0.00 3.18
47 48 2.803956 CTCGTAAACAACATGTCCCGTT 59.196 45.455 0.00 0.25 0.00 4.44
48 49 2.409975 CTCGTAAACAACATGTCCCGT 58.590 47.619 0.00 0.00 0.00 5.28
49 50 1.730064 CCTCGTAAACAACATGTCCCG 59.270 52.381 0.00 0.00 0.00 5.14
50 51 3.048337 TCCTCGTAAACAACATGTCCC 57.952 47.619 0.00 0.00 0.00 4.46
51 52 4.454504 ACAATCCTCGTAAACAACATGTCC 59.545 41.667 0.00 0.00 0.00 4.02
52 53 5.607119 ACAATCCTCGTAAACAACATGTC 57.393 39.130 0.00 0.00 0.00 3.06
53 54 6.348213 GCTTACAATCCTCGTAAACAACATGT 60.348 38.462 0.00 0.00 0.00 3.21
54 55 6.021596 GCTTACAATCCTCGTAAACAACATG 58.978 40.000 0.00 0.00 0.00 3.21
55 56 5.123344 GGCTTACAATCCTCGTAAACAACAT 59.877 40.000 0.00 0.00 0.00 2.71
56 57 4.453136 GGCTTACAATCCTCGTAAACAACA 59.547 41.667 0.00 0.00 0.00 3.33
57 58 4.453136 TGGCTTACAATCCTCGTAAACAAC 59.547 41.667 0.00 0.00 0.00 3.32
58 59 4.643463 TGGCTTACAATCCTCGTAAACAA 58.357 39.130 0.00 0.00 0.00 2.83
59 60 4.274602 TGGCTTACAATCCTCGTAAACA 57.725 40.909 0.00 0.00 0.00 2.83
60 61 5.448632 CCATTGGCTTACAATCCTCGTAAAC 60.449 44.000 0.00 0.00 46.67 2.01
61 62 4.638421 CCATTGGCTTACAATCCTCGTAAA 59.362 41.667 0.00 0.00 46.67 2.01
62 63 4.196193 CCATTGGCTTACAATCCTCGTAA 58.804 43.478 0.00 0.00 46.67 3.18
63 64 3.804036 CCATTGGCTTACAATCCTCGTA 58.196 45.455 0.00 0.00 46.67 3.43
64 65 2.643551 CCATTGGCTTACAATCCTCGT 58.356 47.619 0.00 0.00 46.67 4.18
65 66 1.334869 GCCATTGGCTTACAATCCTCG 59.665 52.381 20.66 0.00 46.67 4.63
79 80 3.910568 AATTACCCACCAATGCCATTG 57.089 42.857 10.52 10.52 39.94 2.82
80 81 5.487131 ACTTTAATTACCCACCAATGCCATT 59.513 36.000 0.00 0.00 0.00 3.16
81 82 5.029474 ACTTTAATTACCCACCAATGCCAT 58.971 37.500 0.00 0.00 0.00 4.40
82 83 4.421131 ACTTTAATTACCCACCAATGCCA 58.579 39.130 0.00 0.00 0.00 4.92
83 84 6.724893 ATACTTTAATTACCCACCAATGCC 57.275 37.500 0.00 0.00 0.00 4.40
109 110 8.203485 ACATTACTCCAAAACATCAAACATGTT 58.797 29.630 4.92 4.92 43.35 2.71
110 111 7.725251 ACATTACTCCAAAACATCAAACATGT 58.275 30.769 0.00 0.00 0.00 3.21
111 112 9.345517 CTACATTACTCCAAAACATCAAACATG 57.654 33.333 0.00 0.00 0.00 3.21
112 113 8.522830 CCTACATTACTCCAAAACATCAAACAT 58.477 33.333 0.00 0.00 0.00 2.71
113 114 7.523052 GCCTACATTACTCCAAAACATCAAACA 60.523 37.037 0.00 0.00 0.00 2.83
114 115 6.806739 GCCTACATTACTCCAAAACATCAAAC 59.193 38.462 0.00 0.00 0.00 2.93
115 116 6.071616 GGCCTACATTACTCCAAAACATCAAA 60.072 38.462 0.00 0.00 0.00 2.69
116 117 5.417580 GGCCTACATTACTCCAAAACATCAA 59.582 40.000 0.00 0.00 0.00 2.57
117 118 4.947388 GGCCTACATTACTCCAAAACATCA 59.053 41.667 0.00 0.00 0.00 3.07
118 119 5.193679 AGGCCTACATTACTCCAAAACATC 58.806 41.667 1.29 0.00 0.00 3.06
119 120 5.193099 AGGCCTACATTACTCCAAAACAT 57.807 39.130 1.29 0.00 0.00 2.71
120 121 4.650972 AGGCCTACATTACTCCAAAACA 57.349 40.909 1.29 0.00 0.00 2.83
121 122 5.007682 TGAAGGCCTACATTACTCCAAAAC 58.992 41.667 5.16 0.00 0.00 2.43
122 123 5.013704 TCTGAAGGCCTACATTACTCCAAAA 59.986 40.000 5.16 0.00 0.00 2.44
123 124 4.534500 TCTGAAGGCCTACATTACTCCAAA 59.466 41.667 5.16 0.00 0.00 3.28
124 125 4.101114 TCTGAAGGCCTACATTACTCCAA 58.899 43.478 5.16 0.00 0.00 3.53
125 126 3.719871 TCTGAAGGCCTACATTACTCCA 58.280 45.455 5.16 0.00 0.00 3.86
126 127 4.965200 ATCTGAAGGCCTACATTACTCC 57.035 45.455 5.16 0.00 0.00 3.85
127 128 4.513318 GCAATCTGAAGGCCTACATTACTC 59.487 45.833 5.16 0.00 0.00 2.59
128 129 4.080356 TGCAATCTGAAGGCCTACATTACT 60.080 41.667 5.16 0.00 0.00 2.24
129 130 4.199310 TGCAATCTGAAGGCCTACATTAC 58.801 43.478 5.16 0.00 0.00 1.89
130 131 4.164030 TCTGCAATCTGAAGGCCTACATTA 59.836 41.667 5.16 0.00 0.00 1.90
131 132 3.054139 TCTGCAATCTGAAGGCCTACATT 60.054 43.478 5.16 0.00 0.00 2.71
132 133 2.507058 TCTGCAATCTGAAGGCCTACAT 59.493 45.455 5.16 0.00 0.00 2.29
133 134 1.908619 TCTGCAATCTGAAGGCCTACA 59.091 47.619 5.16 0.00 0.00 2.74
134 135 2.698855 TCTGCAATCTGAAGGCCTAC 57.301 50.000 5.16 0.00 0.00 3.18
135 136 3.939740 AATCTGCAATCTGAAGGCCTA 57.060 42.857 5.16 0.00 0.00 3.93
136 137 2.758979 CAAATCTGCAATCTGAAGGCCT 59.241 45.455 0.00 0.00 0.00 5.19
137 138 2.159142 CCAAATCTGCAATCTGAAGGCC 60.159 50.000 0.00 0.00 0.00 5.19
138 139 2.756760 TCCAAATCTGCAATCTGAAGGC 59.243 45.455 0.00 0.00 0.00 4.35
139 140 4.202121 CCATCCAAATCTGCAATCTGAAGG 60.202 45.833 0.00 0.00 0.00 3.46
140 141 4.643334 TCCATCCAAATCTGCAATCTGAAG 59.357 41.667 0.00 0.00 0.00 3.02
141 142 4.602107 TCCATCCAAATCTGCAATCTGAA 58.398 39.130 0.00 0.00 0.00 3.02
142 143 4.239428 TCCATCCAAATCTGCAATCTGA 57.761 40.909 0.00 0.00 0.00 3.27
143 144 5.183331 CCTATCCATCCAAATCTGCAATCTG 59.817 44.000 0.00 0.00 0.00 2.90
144 145 5.074102 TCCTATCCATCCAAATCTGCAATCT 59.926 40.000 0.00 0.00 0.00 2.40
145 146 5.319453 TCCTATCCATCCAAATCTGCAATC 58.681 41.667 0.00 0.00 0.00 2.67
146 147 5.329191 TCCTATCCATCCAAATCTGCAAT 57.671 39.130 0.00 0.00 0.00 3.56
147 148 4.794311 TCCTATCCATCCAAATCTGCAA 57.206 40.909 0.00 0.00 0.00 4.08
148 149 4.351704 TCATCCTATCCATCCAAATCTGCA 59.648 41.667 0.00 0.00 0.00 4.41
149 150 4.699257 GTCATCCTATCCATCCAAATCTGC 59.301 45.833 0.00 0.00 0.00 4.26
150 151 6.124316 AGTCATCCTATCCATCCAAATCTG 57.876 41.667 0.00 0.00 0.00 2.90
151 152 6.102321 ACAAGTCATCCTATCCATCCAAATCT 59.898 38.462 0.00 0.00 0.00 2.40
152 153 6.302269 ACAAGTCATCCTATCCATCCAAATC 58.698 40.000 0.00 0.00 0.00 2.17
153 154 6.271585 ACAAGTCATCCTATCCATCCAAAT 57.728 37.500 0.00 0.00 0.00 2.32
154 155 5.715439 ACAAGTCATCCTATCCATCCAAA 57.285 39.130 0.00 0.00 0.00 3.28
155 156 5.429762 AGAACAAGTCATCCTATCCATCCAA 59.570 40.000 0.00 0.00 0.00 3.53
156 157 4.971282 AGAACAAGTCATCCTATCCATCCA 59.029 41.667 0.00 0.00 0.00 3.41
157 158 5.512232 GGAGAACAAGTCATCCTATCCATCC 60.512 48.000 0.00 0.00 0.00 3.51
158 159 5.546526 GGAGAACAAGTCATCCTATCCATC 58.453 45.833 0.00 0.00 0.00 3.51
159 160 4.039730 CGGAGAACAAGTCATCCTATCCAT 59.960 45.833 0.00 0.00 0.00 3.41
160 161 3.384789 CGGAGAACAAGTCATCCTATCCA 59.615 47.826 0.00 0.00 0.00 3.41
161 162 3.800604 GCGGAGAACAAGTCATCCTATCC 60.801 52.174 0.00 0.00 0.00 2.59
162 163 3.385577 GCGGAGAACAAGTCATCCTATC 58.614 50.000 0.00 0.00 0.00 2.08
163 164 2.103263 GGCGGAGAACAAGTCATCCTAT 59.897 50.000 0.00 0.00 0.00 2.57
164 165 1.480954 GGCGGAGAACAAGTCATCCTA 59.519 52.381 0.00 0.00 0.00 2.94
165 166 0.250513 GGCGGAGAACAAGTCATCCT 59.749 55.000 0.00 0.00 0.00 3.24
166 167 0.744771 GGGCGGAGAACAAGTCATCC 60.745 60.000 0.00 0.00 0.00 3.51
167 168 0.250513 AGGGCGGAGAACAAGTCATC 59.749 55.000 0.00 0.00 0.00 2.92
168 169 0.250513 GAGGGCGGAGAACAAGTCAT 59.749 55.000 0.00 0.00 0.00 3.06
169 170 1.671742 GAGGGCGGAGAACAAGTCA 59.328 57.895 0.00 0.00 0.00 3.41
170 171 1.079057 GGAGGGCGGAGAACAAGTC 60.079 63.158 0.00 0.00 0.00 3.01
171 172 2.593956 GGGAGGGCGGAGAACAAGT 61.594 63.158 0.00 0.00 0.00 3.16
172 173 1.842381 AAGGGAGGGCGGAGAACAAG 61.842 60.000 0.00 0.00 0.00 3.16
173 174 1.423794 AAAGGGAGGGCGGAGAACAA 61.424 55.000 0.00 0.00 0.00 2.83
174 175 1.838073 GAAAGGGAGGGCGGAGAACA 61.838 60.000 0.00 0.00 0.00 3.18
175 176 1.078356 GAAAGGGAGGGCGGAGAAC 60.078 63.158 0.00 0.00 0.00 3.01
176 177 0.840722 AAGAAAGGGAGGGCGGAGAA 60.841 55.000 0.00 0.00 0.00 2.87
177 178 0.840722 AAAGAAAGGGAGGGCGGAGA 60.841 55.000 0.00 0.00 0.00 3.71
178 179 0.038310 AAAAGAAAGGGAGGGCGGAG 59.962 55.000 0.00 0.00 0.00 4.63
179 180 1.364269 TAAAAGAAAGGGAGGGCGGA 58.636 50.000 0.00 0.00 0.00 5.54
180 181 2.437085 ATAAAAGAAAGGGAGGGCGG 57.563 50.000 0.00 0.00 0.00 6.13
181 182 3.477530 CCTATAAAAGAAAGGGAGGGCG 58.522 50.000 0.00 0.00 0.00 6.13
188 189 9.155785 TCATCTACTACCCCTATAAAAGAAAGG 57.844 37.037 0.00 0.00 0.00 3.11
192 193 8.636213 CGTTTCATCTACTACCCCTATAAAAGA 58.364 37.037 0.00 0.00 0.00 2.52
193 194 8.419442 ACGTTTCATCTACTACCCCTATAAAAG 58.581 37.037 0.00 0.00 0.00 2.27
194 195 8.310122 ACGTTTCATCTACTACCCCTATAAAA 57.690 34.615 0.00 0.00 0.00 1.52
195 196 7.902920 ACGTTTCATCTACTACCCCTATAAA 57.097 36.000 0.00 0.00 0.00 1.40
196 197 7.902920 AACGTTTCATCTACTACCCCTATAA 57.097 36.000 0.00 0.00 0.00 0.98
197 198 7.902920 AAACGTTTCATCTACTACCCCTATA 57.097 36.000 7.96 0.00 0.00 1.31
198 199 6.803366 AAACGTTTCATCTACTACCCCTAT 57.197 37.500 7.96 0.00 0.00 2.57
199 200 7.716799 TTAAACGTTTCATCTACTACCCCTA 57.283 36.000 18.42 0.00 0.00 3.53
200 201 6.610075 TTAAACGTTTCATCTACTACCCCT 57.390 37.500 18.42 0.00 0.00 4.79
201 202 7.099120 TCTTTAAACGTTTCATCTACTACCCC 58.901 38.462 18.42 0.00 0.00 4.95
202 203 8.601476 CATCTTTAAACGTTTCATCTACTACCC 58.399 37.037 18.42 0.00 0.00 3.69
203 204 8.114905 GCATCTTTAAACGTTTCATCTACTACC 58.885 37.037 18.42 0.00 0.00 3.18
204 205 8.870879 AGCATCTTTAAACGTTTCATCTACTAC 58.129 33.333 18.42 1.32 0.00 2.73
205 206 8.997621 AGCATCTTTAAACGTTTCATCTACTA 57.002 30.769 18.42 0.00 0.00 1.82
206 207 7.602644 TGAGCATCTTTAAACGTTTCATCTACT 59.397 33.333 18.42 8.27 34.92 2.57
207 208 7.739295 TGAGCATCTTTAAACGTTTCATCTAC 58.261 34.615 18.42 3.39 34.92 2.59
208 209 7.899178 TGAGCATCTTTAAACGTTTCATCTA 57.101 32.000 18.42 0.00 34.92 1.98
209 210 6.801539 TGAGCATCTTTAAACGTTTCATCT 57.198 33.333 18.42 6.23 34.92 2.90
210 211 6.305638 GGTTGAGCATCTTTAAACGTTTCATC 59.694 38.462 18.42 5.22 34.92 2.92
211 212 6.149633 GGTTGAGCATCTTTAAACGTTTCAT 58.850 36.000 18.42 2.96 34.92 2.57
212 213 5.066634 TGGTTGAGCATCTTTAAACGTTTCA 59.933 36.000 18.42 3.27 34.92 2.69
213 214 5.516090 TGGTTGAGCATCTTTAAACGTTTC 58.484 37.500 18.42 0.80 34.92 2.78
214 215 5.298276 TCTGGTTGAGCATCTTTAAACGTTT 59.702 36.000 18.90 18.90 34.92 3.60
215 216 4.819630 TCTGGTTGAGCATCTTTAAACGTT 59.180 37.500 0.00 0.00 34.92 3.99
216 217 4.385825 TCTGGTTGAGCATCTTTAAACGT 58.614 39.130 0.00 0.00 34.92 3.99
217 218 5.122239 TGATCTGGTTGAGCATCTTTAAACG 59.878 40.000 0.00 0.00 36.01 3.60
218 219 6.500684 TGATCTGGTTGAGCATCTTTAAAC 57.499 37.500 0.00 0.00 36.01 2.01
227 228 4.711399 CTCCATAATGATCTGGTTGAGCA 58.289 43.478 0.00 0.00 45.73 4.26
228 229 3.501445 GCTCCATAATGATCTGGTTGAGC 59.499 47.826 0.00 0.00 34.03 4.26
229 230 4.755629 CAGCTCCATAATGATCTGGTTGAG 59.244 45.833 0.00 0.00 34.03 3.02
230 231 4.409901 TCAGCTCCATAATGATCTGGTTGA 59.590 41.667 0.00 0.00 34.03 3.18
231 232 4.711399 TCAGCTCCATAATGATCTGGTTG 58.289 43.478 0.00 0.00 34.03 3.77
232 233 5.072736 TGATCAGCTCCATAATGATCTGGTT 59.927 40.000 13.71 0.00 46.16 3.67
233 234 4.596212 TGATCAGCTCCATAATGATCTGGT 59.404 41.667 13.71 0.00 46.16 4.00
234 235 5.161943 TGATCAGCTCCATAATGATCTGG 57.838 43.478 13.71 0.00 46.16 3.86
235 236 6.407202 TCATGATCAGCTCCATAATGATCTG 58.593 40.000 13.71 10.06 46.16 2.90
236 237 6.213802 ACTCATGATCAGCTCCATAATGATCT 59.786 38.462 13.71 0.24 46.16 2.75
237 238 6.408035 ACTCATGATCAGCTCCATAATGATC 58.592 40.000 0.09 7.32 46.18 2.92
238 239 6.375830 ACTCATGATCAGCTCCATAATGAT 57.624 37.500 0.09 0.00 36.40 2.45
239 240 5.820404 ACTCATGATCAGCTCCATAATGA 57.180 39.130 0.09 3.17 0.00 2.57
240 241 6.711194 AGAAACTCATGATCAGCTCCATAATG 59.289 38.462 0.09 0.00 0.00 1.90
241 242 6.839454 AGAAACTCATGATCAGCTCCATAAT 58.161 36.000 0.09 0.00 0.00 1.28
242 243 6.126968 TGAGAAACTCATGATCAGCTCCATAA 60.127 38.462 0.09 0.00 35.39 1.90
243 244 5.364735 TGAGAAACTCATGATCAGCTCCATA 59.635 40.000 0.09 0.00 35.39 2.74
244 245 4.163649 TGAGAAACTCATGATCAGCTCCAT 59.836 41.667 0.09 0.00 35.39 3.41
245 246 3.516700 TGAGAAACTCATGATCAGCTCCA 59.483 43.478 0.09 0.00 35.39 3.86
246 247 4.134379 TGAGAAACTCATGATCAGCTCC 57.866 45.455 0.09 0.00 35.39 4.70
247 248 5.504337 GCATTGAGAAACTCATGATCAGCTC 60.504 44.000 0.09 2.54 40.39 4.09
248 249 4.335874 GCATTGAGAAACTCATGATCAGCT 59.664 41.667 0.09 0.00 40.39 4.24
249 250 4.497674 GGCATTGAGAAACTCATGATCAGC 60.498 45.833 0.09 0.00 40.39 4.26
250 251 4.260661 CGGCATTGAGAAACTCATGATCAG 60.261 45.833 0.09 0.00 40.39 2.90
251 252 3.624410 CGGCATTGAGAAACTCATGATCA 59.376 43.478 0.00 0.00 40.39 2.92
252 253 3.873361 TCGGCATTGAGAAACTCATGATC 59.127 43.478 0.00 0.00 40.39 2.92
253 254 3.877559 TCGGCATTGAGAAACTCATGAT 58.122 40.909 0.00 0.00 40.39 2.45
254 255 3.333029 TCGGCATTGAGAAACTCATGA 57.667 42.857 0.00 0.00 40.39 3.07
255 256 4.627611 ATTCGGCATTGAGAAACTCATG 57.372 40.909 2.30 5.04 40.39 3.07
256 257 5.183713 TCAAATTCGGCATTGAGAAACTCAT 59.816 36.000 2.30 0.00 40.39 2.90
257 258 4.518590 TCAAATTCGGCATTGAGAAACTCA 59.481 37.500 0.00 0.00 38.87 3.41
258 259 5.046910 TCAAATTCGGCATTGAGAAACTC 57.953 39.130 0.00 0.00 32.14 3.01
259 260 5.183713 TCATCAAATTCGGCATTGAGAAACT 59.816 36.000 0.00 0.00 38.80 2.66
260 261 5.401550 TCATCAAATTCGGCATTGAGAAAC 58.598 37.500 0.00 0.00 38.80 2.78
261 262 5.641783 TCATCAAATTCGGCATTGAGAAA 57.358 34.783 0.00 0.00 38.80 2.52
262 263 5.357596 TCATCATCAAATTCGGCATTGAGAA 59.642 36.000 0.00 0.00 38.80 2.87
263 264 4.883006 TCATCATCAAATTCGGCATTGAGA 59.117 37.500 0.00 0.00 38.80 3.27
264 265 5.177725 TCATCATCAAATTCGGCATTGAG 57.822 39.130 0.00 0.00 38.80 3.02
265 266 5.579564 TTCATCATCAAATTCGGCATTGA 57.420 34.783 0.00 0.00 39.66 2.57
266 267 6.838198 AATTCATCATCAAATTCGGCATTG 57.162 33.333 0.00 0.00 0.00 2.82
267 268 6.259167 CCAAATTCATCATCAAATTCGGCATT 59.741 34.615 0.00 0.00 0.00 3.56
268 269 5.756347 CCAAATTCATCATCAAATTCGGCAT 59.244 36.000 0.00 0.00 0.00 4.40
269 270 5.105432 TCCAAATTCATCATCAAATTCGGCA 60.105 36.000 0.00 0.00 0.00 5.69
270 271 5.350633 TCCAAATTCATCATCAAATTCGGC 58.649 37.500 0.00 0.00 0.00 5.54
271 272 9.531942 TTTATCCAAATTCATCATCAAATTCGG 57.468 29.630 0.00 0.00 0.00 4.30
286 287 8.442384 GTGACATTTGCGAATTTTATCCAAATT 58.558 29.630 0.00 0.00 46.10 1.82
287 288 7.064490 GGTGACATTTGCGAATTTTATCCAAAT 59.936 33.333 0.00 0.00 36.77 2.32
288 289 6.367422 GGTGACATTTGCGAATTTTATCCAAA 59.633 34.615 0.00 0.00 0.00 3.28
289 290 5.866633 GGTGACATTTGCGAATTTTATCCAA 59.133 36.000 0.00 0.00 0.00 3.53
290 291 5.047731 TGGTGACATTTGCGAATTTTATCCA 60.048 36.000 0.00 0.51 33.40 3.41
291 292 5.406649 TGGTGACATTTGCGAATTTTATCC 58.593 37.500 0.00 0.00 33.40 2.59
292 293 6.321717 TCTGGTGACATTTGCGAATTTTATC 58.678 36.000 0.00 0.00 41.51 1.75
293 294 6.266168 TCTGGTGACATTTGCGAATTTTAT 57.734 33.333 0.00 0.00 41.51 1.40
294 295 5.697473 TCTGGTGACATTTGCGAATTTTA 57.303 34.783 0.00 0.00 41.51 1.52
295 296 4.582701 TCTGGTGACATTTGCGAATTTT 57.417 36.364 0.00 0.00 41.51 1.82
296 297 4.789012 ATCTGGTGACATTTGCGAATTT 57.211 36.364 0.00 0.00 41.51 1.82
297 298 4.460382 AGAATCTGGTGACATTTGCGAATT 59.540 37.500 0.00 0.00 41.51 2.17
298 299 4.012374 AGAATCTGGTGACATTTGCGAAT 58.988 39.130 0.00 0.00 41.51 3.34
299 300 3.189080 CAGAATCTGGTGACATTTGCGAA 59.811 43.478 1.53 0.00 41.51 4.70
300 301 2.743664 CAGAATCTGGTGACATTTGCGA 59.256 45.455 1.53 0.00 41.51 5.10
301 302 2.730090 GCAGAATCTGGTGACATTTGCG 60.730 50.000 12.66 0.00 41.51 4.85
302 303 2.490903 AGCAGAATCTGGTGACATTTGC 59.509 45.455 14.70 0.00 40.87 3.68
303 304 4.008330 AGAGCAGAATCTGGTGACATTTG 58.992 43.478 20.42 0.00 42.53 2.32
304 305 4.298103 AGAGCAGAATCTGGTGACATTT 57.702 40.909 20.42 0.00 42.53 2.32
305 306 3.996921 AGAGCAGAATCTGGTGACATT 57.003 42.857 20.42 0.00 42.53 2.71
306 307 4.285020 TCTAGAGCAGAATCTGGTGACAT 58.715 43.478 20.42 5.61 42.53 3.06
307 308 3.701664 TCTAGAGCAGAATCTGGTGACA 58.298 45.455 20.42 3.61 42.53 3.58
308 309 4.681744 CTTCTAGAGCAGAATCTGGTGAC 58.318 47.826 20.42 6.37 42.53 3.67
309 310 4.998671 CTTCTAGAGCAGAATCTGGTGA 57.001 45.455 20.42 8.22 42.53 4.02
322 323 2.554893 GTGATCCTACCGGCTTCTAGAG 59.445 54.545 0.00 0.00 0.00 2.43
323 324 2.584236 GTGATCCTACCGGCTTCTAGA 58.416 52.381 0.00 0.00 0.00 2.43
324 325 1.614413 GGTGATCCTACCGGCTTCTAG 59.386 57.143 0.00 0.00 0.00 2.43
325 326 1.700955 GGTGATCCTACCGGCTTCTA 58.299 55.000 0.00 0.00 0.00 2.10
326 327 1.049289 GGGTGATCCTACCGGCTTCT 61.049 60.000 0.00 0.00 41.79 2.85
327 328 1.335132 TGGGTGATCCTACCGGCTTC 61.335 60.000 0.00 0.00 41.79 3.86
328 329 1.306654 TGGGTGATCCTACCGGCTT 60.307 57.895 0.00 0.00 41.79 4.35
329 330 2.064581 GTGGGTGATCCTACCGGCT 61.065 63.158 0.00 0.00 41.79 5.52
330 331 1.696097 ATGTGGGTGATCCTACCGGC 61.696 60.000 0.00 0.00 43.33 6.13
331 332 0.837272 AATGTGGGTGATCCTACCGG 59.163 55.000 0.00 0.00 43.33 5.28
332 333 2.682856 CAAAATGTGGGTGATCCTACCG 59.317 50.000 0.00 0.00 43.33 4.02
333 334 3.963129 TCAAAATGTGGGTGATCCTACC 58.037 45.455 0.00 0.00 43.33 3.18
334 335 5.975693 TTTCAAAATGTGGGTGATCCTAC 57.024 39.130 0.00 0.00 44.08 3.18
335 336 7.234371 TGAATTTTCAAAATGTGGGTGATCCTA 59.766 33.333 0.00 0.00 33.55 2.94
336 337 6.043012 TGAATTTTCAAAATGTGGGTGATCCT 59.957 34.615 0.00 0.00 33.55 3.24
337 338 6.229733 TGAATTTTCAAAATGTGGGTGATCC 58.770 36.000 0.00 0.00 33.55 3.36
338 339 7.153985 TCTGAATTTTCAAAATGTGGGTGATC 58.846 34.615 0.00 0.00 36.64 2.92
339 340 7.065120 TCTGAATTTTCAAAATGTGGGTGAT 57.935 32.000 0.00 0.00 36.64 3.06
340 341 6.477053 TCTGAATTTTCAAAATGTGGGTGA 57.523 33.333 0.00 0.00 36.64 4.02
341 342 6.930164 TGATCTGAATTTTCAAAATGTGGGTG 59.070 34.615 0.00 0.00 36.64 4.61
342 343 7.065120 TGATCTGAATTTTCAAAATGTGGGT 57.935 32.000 0.00 0.00 36.64 4.51
343 344 7.065324 CCATGATCTGAATTTTCAAAATGTGGG 59.935 37.037 0.00 0.00 36.64 4.61
344 345 7.413657 GCCATGATCTGAATTTTCAAAATGTGG 60.414 37.037 0.00 2.90 36.64 4.17
345 346 7.461107 GCCATGATCTGAATTTTCAAAATGTG 58.539 34.615 0.00 0.00 36.64 3.21
346 347 6.311935 CGCCATGATCTGAATTTTCAAAATGT 59.688 34.615 0.00 0.00 36.64 2.71
347 348 6.532302 TCGCCATGATCTGAATTTTCAAAATG 59.468 34.615 0.00 0.00 36.64 2.32
348 349 6.632909 TCGCCATGATCTGAATTTTCAAAAT 58.367 32.000 0.00 0.00 36.64 1.82
349 350 6.023357 TCGCCATGATCTGAATTTTCAAAA 57.977 33.333 0.00 0.00 36.64 2.44
350 351 5.641783 TCGCCATGATCTGAATTTTCAAA 57.358 34.783 0.00 0.00 36.64 2.69
351 352 5.183713 AGTTCGCCATGATCTGAATTTTCAA 59.816 36.000 0.00 0.00 36.64 2.69
352 353 4.701651 AGTTCGCCATGATCTGAATTTTCA 59.298 37.500 0.00 0.00 35.57 2.69
353 354 5.240713 AGTTCGCCATGATCTGAATTTTC 57.759 39.130 0.00 0.00 0.00 2.29
354 355 4.096984 GGAGTTCGCCATGATCTGAATTTT 59.903 41.667 0.00 0.00 0.00 1.82
355 356 3.629398 GGAGTTCGCCATGATCTGAATTT 59.371 43.478 0.00 0.00 0.00 1.82
356 357 3.209410 GGAGTTCGCCATGATCTGAATT 58.791 45.455 0.00 0.00 0.00 2.17
357 358 2.171237 TGGAGTTCGCCATGATCTGAAT 59.829 45.455 0.00 0.00 31.66 2.57
358 359 1.554617 TGGAGTTCGCCATGATCTGAA 59.445 47.619 0.00 0.00 31.66 3.02
359 360 1.194218 TGGAGTTCGCCATGATCTGA 58.806 50.000 0.00 0.00 31.66 3.27
360 361 2.251409 ATGGAGTTCGCCATGATCTG 57.749 50.000 7.24 0.00 46.62 2.90
367 368 1.899437 GAGGGTCATGGAGTTCGCCA 61.899 60.000 0.00 0.00 43.23 5.69
368 369 1.153349 GAGGGTCATGGAGTTCGCC 60.153 63.158 0.00 0.00 0.00 5.54
369 370 0.179000 ATGAGGGTCATGGAGTTCGC 59.821 55.000 0.00 0.00 35.43 4.70
370 371 1.202580 GGATGAGGGTCATGGAGTTCG 60.203 57.143 0.00 0.00 37.20 3.95
371 372 2.103941 GAGGATGAGGGTCATGGAGTTC 59.896 54.545 0.00 0.00 37.20 3.01
372 373 2.122768 GAGGATGAGGGTCATGGAGTT 58.877 52.381 0.00 0.00 37.20 3.01
373 374 1.694048 GGAGGATGAGGGTCATGGAGT 60.694 57.143 0.00 0.00 37.20 3.85
374 375 1.055040 GGAGGATGAGGGTCATGGAG 58.945 60.000 0.00 0.00 37.20 3.86
375 376 0.343018 TGGAGGATGAGGGTCATGGA 59.657 55.000 0.00 0.00 37.20 3.41
376 377 0.471617 GTGGAGGATGAGGGTCATGG 59.528 60.000 0.00 0.00 37.20 3.66
377 378 1.206878 TGTGGAGGATGAGGGTCATG 58.793 55.000 0.00 0.00 37.20 3.07
378 379 1.971149 TTGTGGAGGATGAGGGTCAT 58.029 50.000 0.00 0.00 40.34 3.06
379 380 1.839994 GATTGTGGAGGATGAGGGTCA 59.160 52.381 0.00 0.00 0.00 4.02
380 381 1.839994 TGATTGTGGAGGATGAGGGTC 59.160 52.381 0.00 0.00 0.00 4.46
381 382 1.971149 TGATTGTGGAGGATGAGGGT 58.029 50.000 0.00 0.00 0.00 4.34
382 383 2.174210 ACATGATTGTGGAGGATGAGGG 59.826 50.000 0.00 0.00 33.85 4.30
383 384 3.572632 ACATGATTGTGGAGGATGAGG 57.427 47.619 0.00 0.00 33.85 3.86
384 385 4.095932 CACAACATGATTGTGGAGGATGAG 59.904 45.833 22.77 4.98 44.33 2.90
385 386 4.011698 CACAACATGATTGTGGAGGATGA 58.988 43.478 22.77 0.00 44.33 2.92
386 387 4.365899 CACAACATGATTGTGGAGGATG 57.634 45.455 22.77 6.02 44.33 3.51
387 388 6.578841 TCATACACAACATGATTGTGGAGGAT 60.579 38.462 28.62 19.21 45.57 3.24
405 406 5.063944 GATGACAGGTTGTGTGATCATACAC 59.936 44.000 23.16 15.80 46.13 2.90
406 407 4.615588 TGACAGGTTGTGTGATCATACA 57.384 40.909 20.07 20.07 40.56 2.29
407 408 5.725110 GATGACAGGTTGTGTGATCATAC 57.275 43.478 15.13 15.13 46.13 2.39
411 412 2.744202 GGTGATGACAGGTTGTGTGATC 59.256 50.000 0.00 0.00 46.81 2.92
412 413 2.373169 AGGTGATGACAGGTTGTGTGAT 59.627 45.455 0.00 0.00 40.56 3.06
413 414 1.768275 AGGTGATGACAGGTTGTGTGA 59.232 47.619 0.00 0.00 40.56 3.58
414 415 2.146342 GAGGTGATGACAGGTTGTGTG 58.854 52.381 0.00 0.00 40.56 3.82
415 416 1.072331 GGAGGTGATGACAGGTTGTGT 59.928 52.381 0.00 0.00 44.49 3.72
416 417 1.611673 GGGAGGTGATGACAGGTTGTG 60.612 57.143 0.00 0.00 0.00 3.33
417 418 0.693049 GGGAGGTGATGACAGGTTGT 59.307 55.000 0.00 0.00 0.00 3.32
418 419 0.692476 TGGGAGGTGATGACAGGTTG 59.308 55.000 0.00 0.00 0.00 3.77
419 420 1.673767 ATGGGAGGTGATGACAGGTT 58.326 50.000 0.00 0.00 0.00 3.50
420 421 2.568546 TATGGGAGGTGATGACAGGT 57.431 50.000 0.00 0.00 0.00 4.00
421 422 3.137176 ACATTATGGGAGGTGATGACAGG 59.863 47.826 0.00 0.00 0.00 4.00
422 423 4.102210 AGACATTATGGGAGGTGATGACAG 59.898 45.833 0.00 0.00 0.00 3.51
423 424 4.040047 AGACATTATGGGAGGTGATGACA 58.960 43.478 0.00 0.00 0.00 3.58
424 425 4.346418 AGAGACATTATGGGAGGTGATGAC 59.654 45.833 0.00 0.00 0.00 3.06
425 426 4.346127 CAGAGACATTATGGGAGGTGATGA 59.654 45.833 0.00 0.00 0.00 2.92
426 427 4.504514 CCAGAGACATTATGGGAGGTGATG 60.505 50.000 0.00 0.00 0.00 3.07
427 428 3.649981 CCAGAGACATTATGGGAGGTGAT 59.350 47.826 0.00 0.00 0.00 3.06
428 429 3.041211 CCAGAGACATTATGGGAGGTGA 58.959 50.000 0.00 0.00 0.00 4.02
429 430 3.041211 TCCAGAGACATTATGGGAGGTG 58.959 50.000 0.00 0.00 34.71 4.00
430 431 3.421394 TCCAGAGACATTATGGGAGGT 57.579 47.619 0.00 0.00 34.71 3.85
431 432 3.262915 GGATCCAGAGACATTATGGGAGG 59.737 52.174 6.95 0.00 34.71 4.30
432 433 3.262915 GGGATCCAGAGACATTATGGGAG 59.737 52.174 15.23 0.00 34.71 4.30
433 434 3.251484 GGGATCCAGAGACATTATGGGA 58.749 50.000 15.23 0.00 34.71 4.37
434 435 2.027745 CGGGATCCAGAGACATTATGGG 60.028 54.545 15.23 0.00 34.71 4.00
435 436 2.634940 ACGGGATCCAGAGACATTATGG 59.365 50.000 19.55 0.00 35.30 2.74
436 437 4.524714 ACTACGGGATCCAGAGACATTATG 59.475 45.833 19.55 0.00 0.00 1.90
437 438 4.742012 ACTACGGGATCCAGAGACATTAT 58.258 43.478 19.55 0.00 0.00 1.28
438 439 4.180377 ACTACGGGATCCAGAGACATTA 57.820 45.455 19.55 0.00 0.00 1.90
439 440 3.033659 ACTACGGGATCCAGAGACATT 57.966 47.619 19.55 0.00 0.00 2.71
440 441 2.757894 ACTACGGGATCCAGAGACAT 57.242 50.000 19.55 0.00 0.00 3.06
441 442 2.526888 AACTACGGGATCCAGAGACA 57.473 50.000 19.55 0.00 0.00 3.41
442 443 3.243468 GCTAAACTACGGGATCCAGAGAC 60.243 52.174 19.55 0.00 0.00 3.36
443 444 2.957006 GCTAAACTACGGGATCCAGAGA 59.043 50.000 19.55 5.07 0.00 3.10
444 445 2.693591 TGCTAAACTACGGGATCCAGAG 59.306 50.000 19.55 13.19 0.00 3.35
445 446 2.693591 CTGCTAAACTACGGGATCCAGA 59.306 50.000 19.55 1.57 0.00 3.86
446 447 2.224066 CCTGCTAAACTACGGGATCCAG 60.224 54.545 15.23 12.90 33.88 3.86
447 448 1.760613 CCTGCTAAACTACGGGATCCA 59.239 52.381 15.23 0.00 33.88 3.41
448 449 1.761198 ACCTGCTAAACTACGGGATCC 59.239 52.381 1.92 1.92 36.12 3.36
449 450 2.223994 GGACCTGCTAAACTACGGGATC 60.224 54.545 0.00 0.00 36.12 3.36
450 451 1.761198 GGACCTGCTAAACTACGGGAT 59.239 52.381 0.00 0.00 36.12 3.85
451 452 1.188863 GGACCTGCTAAACTACGGGA 58.811 55.000 0.00 0.00 36.12 5.14
452 453 0.179119 CGGACCTGCTAAACTACGGG 60.179 60.000 0.00 0.00 38.37 5.28
453 454 0.529378 ACGGACCTGCTAAACTACGG 59.471 55.000 0.00 0.00 0.00 4.02
454 455 1.200716 TGACGGACCTGCTAAACTACG 59.799 52.381 0.00 0.00 0.00 3.51
455 456 2.877335 CTGACGGACCTGCTAAACTAC 58.123 52.381 0.00 0.00 0.00 2.73
456 457 1.203994 GCTGACGGACCTGCTAAACTA 59.796 52.381 0.00 0.00 0.00 2.24
457 458 0.037232 GCTGACGGACCTGCTAAACT 60.037 55.000 0.00 0.00 0.00 2.66
458 459 0.320421 TGCTGACGGACCTGCTAAAC 60.320 55.000 0.00 0.00 33.03 2.01
459 460 0.394938 TTGCTGACGGACCTGCTAAA 59.605 50.000 0.00 0.00 33.03 1.85
460 461 0.320421 GTTGCTGACGGACCTGCTAA 60.320 55.000 0.00 0.00 33.03 3.09
461 462 1.185618 AGTTGCTGACGGACCTGCTA 61.186 55.000 0.00 0.00 33.03 3.49
462 463 1.185618 TAGTTGCTGACGGACCTGCT 61.186 55.000 0.00 0.00 33.03 4.24
463 464 0.108138 ATAGTTGCTGACGGACCTGC 60.108 55.000 0.00 0.00 0.00 4.85
464 465 3.520290 TTATAGTTGCTGACGGACCTG 57.480 47.619 0.00 0.00 0.00 4.00
465 466 3.514309 ACTTTATAGTTGCTGACGGACCT 59.486 43.478 0.00 0.00 0.00 3.85
466 467 3.617263 CACTTTATAGTTGCTGACGGACC 59.383 47.826 0.00 0.00 30.26 4.46
467 468 3.617263 CCACTTTATAGTTGCTGACGGAC 59.383 47.826 0.00 0.00 30.26 4.79
468 469 3.369052 CCCACTTTATAGTTGCTGACGGA 60.369 47.826 0.00 0.00 30.26 4.69
469 470 2.936498 CCCACTTTATAGTTGCTGACGG 59.064 50.000 0.00 0.00 30.26 4.79
470 471 2.351726 GCCCACTTTATAGTTGCTGACG 59.648 50.000 0.00 0.00 30.26 4.35
471 472 3.610911 AGCCCACTTTATAGTTGCTGAC 58.389 45.455 6.38 0.00 38.08 3.51
472 473 4.009675 CAAGCCCACTTTATAGTTGCTGA 58.990 43.478 7.57 0.00 38.96 4.26
473 474 3.129287 CCAAGCCCACTTTATAGTTGCTG 59.871 47.826 7.57 3.92 38.96 4.41
474 475 3.010138 TCCAAGCCCACTTTATAGTTGCT 59.990 43.478 2.44 2.44 40.06 3.91
475 476 3.352648 TCCAAGCCCACTTTATAGTTGC 58.647 45.455 0.00 0.00 32.29 4.17
476 477 3.378427 GCTCCAAGCCCACTTTATAGTTG 59.622 47.826 0.00 0.00 34.48 3.16
477 478 3.010138 TGCTCCAAGCCCACTTTATAGTT 59.990 43.478 0.00 0.00 41.51 2.24
478 479 2.576191 TGCTCCAAGCCCACTTTATAGT 59.424 45.455 0.00 0.00 41.51 2.12
479 480 2.945668 GTGCTCCAAGCCCACTTTATAG 59.054 50.000 0.00 0.00 41.51 1.31
480 481 2.576191 AGTGCTCCAAGCCCACTTTATA 59.424 45.455 0.00 0.00 41.51 0.98
481 482 1.355720 AGTGCTCCAAGCCCACTTTAT 59.644 47.619 0.00 0.00 41.51 1.40
482 483 0.771127 AGTGCTCCAAGCCCACTTTA 59.229 50.000 0.00 0.00 41.51 1.85
483 484 0.538287 GAGTGCTCCAAGCCCACTTT 60.538 55.000 0.00 0.00 41.51 2.66
484 485 1.073897 GAGTGCTCCAAGCCCACTT 59.926 57.895 0.00 0.00 41.51 3.16
485 486 2.753029 GAGTGCTCCAAGCCCACT 59.247 61.111 0.00 0.00 41.51 4.00
495 496 1.001860 GGAGAGGCATATGGAGTGCTC 59.998 57.143 4.56 0.00 42.16 4.26
496 497 1.055040 GGAGAGGCATATGGAGTGCT 58.945 55.000 4.56 0.00 42.16 4.40
497 498 0.761187 TGGAGAGGCATATGGAGTGC 59.239 55.000 4.56 0.00 41.78 4.40
498 499 1.764723 TGTGGAGAGGCATATGGAGTG 59.235 52.381 4.56 0.00 0.00 3.51
499 500 2.180946 TGTGGAGAGGCATATGGAGT 57.819 50.000 4.56 0.00 0.00 3.85
500 501 2.027377 GGATGTGGAGAGGCATATGGAG 60.027 54.545 4.56 0.00 0.00 3.86
501 502 1.980765 GGATGTGGAGAGGCATATGGA 59.019 52.381 4.56 0.00 0.00 3.41
502 503 1.983691 AGGATGTGGAGAGGCATATGG 59.016 52.381 4.56 0.00 0.00 2.74
503 504 3.784511 AAGGATGTGGAGAGGCATATG 57.215 47.619 0.00 0.00 0.00 1.78
504 505 3.979347 AGAAAGGATGTGGAGAGGCATAT 59.021 43.478 0.00 0.00 0.00 1.78
505 506 3.387962 AGAAAGGATGTGGAGAGGCATA 58.612 45.455 0.00 0.00 0.00 3.14
506 507 2.203584 AGAAAGGATGTGGAGAGGCAT 58.796 47.619 0.00 0.00 0.00 4.40
507 508 1.661463 AGAAAGGATGTGGAGAGGCA 58.339 50.000 0.00 0.00 0.00 4.75
508 509 2.158885 GGTAGAAAGGATGTGGAGAGGC 60.159 54.545 0.00 0.00 0.00 4.70
509 510 3.107601 TGGTAGAAAGGATGTGGAGAGG 58.892 50.000 0.00 0.00 0.00 3.69
510 511 4.026744 TCTGGTAGAAAGGATGTGGAGAG 58.973 47.826 0.00 0.00 0.00 3.20
511 512 4.061131 TCTGGTAGAAAGGATGTGGAGA 57.939 45.455 0.00 0.00 0.00 3.71
512 513 5.121811 CAATCTGGTAGAAAGGATGTGGAG 58.878 45.833 0.00 0.00 0.00 3.86
513 514 4.536090 ACAATCTGGTAGAAAGGATGTGGA 59.464 41.667 0.00 0.00 0.00 4.02
514 515 4.848357 ACAATCTGGTAGAAAGGATGTGG 58.152 43.478 0.00 0.00 0.00 4.17
515 516 5.707298 ACAACAATCTGGTAGAAAGGATGTG 59.293 40.000 0.00 0.00 0.00 3.21
516 517 5.880901 ACAACAATCTGGTAGAAAGGATGT 58.119 37.500 0.00 0.00 0.00 3.06
517 518 6.207417 ACAACAACAATCTGGTAGAAAGGATG 59.793 38.462 0.00 0.00 0.00 3.51
518 519 6.306987 ACAACAACAATCTGGTAGAAAGGAT 58.693 36.000 0.00 0.00 0.00 3.24
519 520 5.690865 ACAACAACAATCTGGTAGAAAGGA 58.309 37.500 0.00 0.00 0.00 3.36
520 521 6.391227 AACAACAACAATCTGGTAGAAAGG 57.609 37.500 0.00 0.00 0.00 3.11
521 522 8.702163 AAAAACAACAACAATCTGGTAGAAAG 57.298 30.769 0.00 0.00 0.00 2.62
577 578 8.631797 TGGTAGTTTTTGGTTAAATACTCAACC 58.368 33.333 0.00 0.00 43.78 3.77
578 579 9.454585 GTGGTAGTTTTTGGTTAAATACTCAAC 57.545 33.333 0.00 0.00 38.47 3.18
579 580 9.186837 TGTGGTAGTTTTTGGTTAAATACTCAA 57.813 29.630 0.00 0.00 38.47 3.02
615 616 4.036734 AGAGTGGTAGTTTTTCGTCACGTA 59.963 41.667 0.00 0.00 0.00 3.57
837 842 1.134670 GCTCTCACTTATTGGCCGACT 60.135 52.381 0.00 0.00 0.00 4.18
1245 1250 0.826715 TCTTCTTCGGCCTCTGATGG 59.173 55.000 0.00 0.00 0.00 3.51
1427 1432 7.646548 TCTAAACTACAGCACACATCTCTAT 57.353 36.000 0.00 0.00 0.00 1.98
1575 1580 9.379791 AGTAAACACCTAACTAATACATTCAGC 57.620 33.333 0.00 0.00 0.00 4.26
1686 1693 1.682854 CACAACACCTGACTTGGCATT 59.317 47.619 0.00 0.00 0.00 3.56
2839 3059 8.315482 TCTATGTCAGGCACTATCTACTACTAG 58.685 40.741 0.00 0.00 36.02 2.57
2840 3060 8.203681 TCTATGTCAGGCACTATCTACTACTA 57.796 38.462 0.00 0.00 36.02 1.82
3344 3603 0.927029 GGGTCCTTGGGCCTTCTAAT 59.073 55.000 10.40 0.00 0.00 1.73
3346 3605 0.253630 ATGGGTCCTTGGGCCTTCTA 60.254 55.000 10.40 0.00 0.00 2.10
3350 3609 3.350163 CCATGGGTCCTTGGGCCT 61.350 66.667 10.40 0.00 37.53 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.