Multiple sequence alignment - TraesCS6A01G149400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G149400 chr6A 100.000 3922 0 0 1 3922 131442302 131446223 0.000000e+00 7243.0
1 TraesCS6A01G149400 chr6A 85.326 184 14 8 2026 2208 543496095 543495924 1.120000e-40 178.0
2 TraesCS6A01G149400 chr6A 96.774 31 1 0 3511 3541 131445747 131445777 7.000000e-03 52.8
3 TraesCS6A01G149400 chr6A 96.774 31 1 0 3446 3476 131445812 131445842 7.000000e-03 52.8
4 TraesCS6A01G149400 chr6D 91.088 3198 146 52 281 3402 107795484 107798618 0.000000e+00 4198.0
5 TraesCS6A01G149400 chr6D 90.554 487 44 2 1611 2095 437548889 437548403 0.000000e+00 643.0
6 TraesCS6A01G149400 chr6D 81.712 514 47 18 1121 1624 450972853 450973329 6.150000e-103 385.0
7 TraesCS6A01G149400 chr6D 85.135 222 10 9 3483 3685 107798655 107798872 5.140000e-49 206.0
8 TraesCS6A01G149400 chr6D 97.701 87 1 1 3751 3837 107798880 107798965 8.780000e-32 148.0
9 TraesCS6A01G149400 chr6D 95.455 88 4 0 3835 3922 107799013 107799100 1.470000e-29 141.0
10 TraesCS6A01G149400 chr6B 89.237 2936 166 70 280 3128 195125958 195128830 0.000000e+00 3533.0
11 TraesCS6A01G149400 chr6B 94.706 170 7 2 1 169 21064704 21064536 3.010000e-66 263.0
12 TraesCS6A01G149400 chr6B 82.812 128 10 10 3720 3837 195174848 195174973 1.930000e-18 104.0
13 TraesCS6A01G149400 chr4A 92.325 1329 79 14 1292 2614 123928282 123929593 0.000000e+00 1868.0
14 TraesCS6A01G149400 chr4A 91.520 684 44 9 1934 2613 344517073 344517746 0.000000e+00 929.0
15 TraesCS6A01G149400 chr4A 89.529 382 33 2 1292 1669 344508208 344508586 9.860000e-131 477.0
16 TraesCS6A01G149400 chr4A 89.005 382 34 3 1292 1669 344502339 344502716 2.130000e-127 466.0
17 TraesCS6A01G149400 chr4A 94.191 241 13 1 1698 1937 344502714 344502954 2.230000e-97 366.0
18 TraesCS6A01G149400 chr4A 92.975 242 16 1 1698 1938 344508584 344508825 6.240000e-93 351.0
19 TraesCS6A01G149400 chr7A 94.233 867 40 8 1750 2614 39248666 39249524 0.000000e+00 1315.0
20 TraesCS6A01G149400 chr2A 96.933 163 5 0 1 163 84977608 84977770 1.390000e-69 274.0
21 TraesCS6A01G149400 chr3B 96.319 163 6 0 1 163 12174936 12174774 6.460000e-68 268.0
22 TraesCS6A01G149400 chr3B 95.783 166 6 1 1 165 612798848 612798683 2.320000e-67 267.0
23 TraesCS6A01G149400 chr3B 85.897 156 22 0 2297 2452 771132520 771132675 2.420000e-37 167.0
24 TraesCS6A01G149400 chr1A 96.319 163 6 0 1 163 479214015 479214177 6.460000e-68 268.0
25 TraesCS6A01G149400 chr2B 95.238 168 8 0 1 168 235906714 235906881 2.320000e-67 267.0
26 TraesCS6A01G149400 chr3A 95.210 167 8 0 1 167 746884577 746884411 8.360000e-67 265.0
27 TraesCS6A01G149400 chr1B 94.186 172 9 1 1 171 99529413 99529584 1.080000e-65 261.0
28 TraesCS6A01G149400 chr1B 85.256 156 23 0 2297 2452 667237987 667237832 1.130000e-35 161.0
29 TraesCS6A01G149400 chr1B 95.833 96 4 0 2295 2390 225454794 225454889 5.250000e-34 156.0
30 TraesCS6A01G149400 chr5A 93.182 176 11 1 1 176 641061615 641061789 1.400000e-64 257.0
31 TraesCS6A01G149400 chr4D 85.870 184 13 8 2026 2208 493749010 493748839 2.410000e-42 183.0
32 TraesCS6A01G149400 chr5B 85.326 184 14 8 2026 2208 588626115 588625944 1.120000e-40 178.0
33 TraesCS6A01G149400 chr5D 85.897 156 22 0 2297 2452 520296826 520296981 2.420000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G149400 chr6A 131442302 131446223 3921 False 2449.533333 7243 97.849333 1 3922 3 chr6A.!!$F1 3921
1 TraesCS6A01G149400 chr6D 107795484 107799100 3616 False 1173.250000 4198 92.344750 281 3922 4 chr6D.!!$F2 3641
2 TraesCS6A01G149400 chr6B 195125958 195128830 2872 False 3533.000000 3533 89.237000 280 3128 1 chr6B.!!$F1 2848
3 TraesCS6A01G149400 chr4A 123928282 123929593 1311 False 1868.000000 1868 92.325000 1292 2614 1 chr4A.!!$F1 1322
4 TraesCS6A01G149400 chr4A 344517073 344517746 673 False 929.000000 929 91.520000 1934 2613 1 chr4A.!!$F2 679
5 TraesCS6A01G149400 chr4A 344502339 344502954 615 False 416.000000 466 91.598000 1292 1937 2 chr4A.!!$F3 645
6 TraesCS6A01G149400 chr4A 344508208 344508825 617 False 414.000000 477 91.252000 1292 1938 2 chr4A.!!$F4 646
7 TraesCS6A01G149400 chr7A 39248666 39249524 858 False 1315.000000 1315 94.233000 1750 2614 1 chr7A.!!$F1 864

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 189 0.095935 CGTGTAGACGTAGGACACCG 59.904 60.0 16.92 10.79 40.29 4.94 F
901 948 0.104144 TCCTCCCTCCAAACCTCCAA 60.104 55.0 0.00 0.00 0.00 3.53 F
904 951 0.481128 TCCCTCCAAACCTCCAAACC 59.519 55.0 0.00 0.00 0.00 3.27 F
905 952 0.482887 CCCTCCAAACCTCCAAACCT 59.517 55.0 0.00 0.00 0.00 3.50 F
2154 2247 0.524862 CAAGAACCAGTCCATGCAGC 59.475 55.0 0.00 0.00 0.00 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1621 1705 0.179056 ACGGGCACGAATCCTTATGG 60.179 55.000 19.19 0.00 44.60 2.74 R
1949 2038 0.458669 TTAAGCTCATCGACCCGGTC 59.541 55.000 7.59 7.59 0.00 4.79 R
2413 2509 0.956902 TCCCGATTCTCGACACGTCA 60.957 55.000 0.00 0.00 43.74 4.35 R
2686 2802 1.227089 CAAGATCGTCTGCCTCCCG 60.227 63.158 0.00 0.00 0.00 5.14 R
3467 3597 0.038744 AAGTGTTCCTGCCATCCTGG 59.961 55.000 0.00 0.00 41.55 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.520204 CGGAAGCAAAAATTATATCAGTGAATT 57.480 29.630 0.00 0.00 0.00 2.17
82 83 2.112297 TTTTTCTCCCGCCGCAGT 59.888 55.556 0.00 0.00 0.00 4.40
83 84 1.527380 TTTTTCTCCCGCCGCAGTT 60.527 52.632 0.00 0.00 0.00 3.16
84 85 1.791103 TTTTTCTCCCGCCGCAGTTG 61.791 55.000 0.00 0.00 0.00 3.16
85 86 4.697756 TTCTCCCGCCGCAGTTGG 62.698 66.667 0.00 0.00 0.00 3.77
90 91 3.726517 CCGCCGCAGTTGGTCTTG 61.727 66.667 0.00 0.00 0.00 3.02
91 92 2.972505 CGCCGCAGTTGGTCTTGT 60.973 61.111 0.00 0.00 0.00 3.16
92 93 2.542907 CGCCGCAGTTGGTCTTGTT 61.543 57.895 0.00 0.00 0.00 2.83
93 94 1.008538 GCCGCAGTTGGTCTTGTTG 60.009 57.895 0.00 0.00 0.00 3.33
94 95 1.654220 CCGCAGTTGGTCTTGTTGG 59.346 57.895 0.00 0.00 0.00 3.77
95 96 1.101049 CCGCAGTTGGTCTTGTTGGT 61.101 55.000 0.00 0.00 0.00 3.67
96 97 0.738389 CGCAGTTGGTCTTGTTGGTT 59.262 50.000 0.00 0.00 0.00 3.67
97 98 1.944024 CGCAGTTGGTCTTGTTGGTTA 59.056 47.619 0.00 0.00 0.00 2.85
98 99 2.356382 CGCAGTTGGTCTTGTTGGTTAA 59.644 45.455 0.00 0.00 0.00 2.01
99 100 3.181495 CGCAGTTGGTCTTGTTGGTTAAA 60.181 43.478 0.00 0.00 0.00 1.52
100 101 4.499019 CGCAGTTGGTCTTGTTGGTTAAAT 60.499 41.667 0.00 0.00 0.00 1.40
101 102 5.356426 GCAGTTGGTCTTGTTGGTTAAATT 58.644 37.500 0.00 0.00 0.00 1.82
102 103 5.815222 GCAGTTGGTCTTGTTGGTTAAATTT 59.185 36.000 0.00 0.00 0.00 1.82
103 104 6.981559 GCAGTTGGTCTTGTTGGTTAAATTTA 59.018 34.615 0.00 0.00 0.00 1.40
104 105 7.655732 GCAGTTGGTCTTGTTGGTTAAATTTAT 59.344 33.333 0.00 0.00 0.00 1.40
105 106 8.977505 CAGTTGGTCTTGTTGGTTAAATTTATG 58.022 33.333 0.00 0.00 0.00 1.90
106 107 8.919145 AGTTGGTCTTGTTGGTTAAATTTATGA 58.081 29.630 0.00 0.00 0.00 2.15
107 108 9.705290 GTTGGTCTTGTTGGTTAAATTTATGAT 57.295 29.630 0.00 0.00 0.00 2.45
108 109 9.921637 TTGGTCTTGTTGGTTAAATTTATGATC 57.078 29.630 0.00 0.00 0.00 2.92
109 110 9.083422 TGGTCTTGTTGGTTAAATTTATGATCA 57.917 29.630 0.00 0.00 0.00 2.92
110 111 9.921637 GGTCTTGTTGGTTAAATTTATGATCAA 57.078 29.630 0.00 0.00 0.00 2.57
123 124 6.925610 TTTATGATCAAAGTTGGATCTCGG 57.074 37.500 18.99 0.00 41.35 4.63
124 125 4.760530 ATGATCAAAGTTGGATCTCGGA 57.239 40.909 18.99 1.74 41.35 4.55
125 126 4.551702 TGATCAAAGTTGGATCTCGGAA 57.448 40.909 18.99 0.00 41.35 4.30
126 127 4.905429 TGATCAAAGTTGGATCTCGGAAA 58.095 39.130 18.99 0.00 41.35 3.13
127 128 4.937620 TGATCAAAGTTGGATCTCGGAAAG 59.062 41.667 18.99 0.00 41.35 2.62
128 129 3.074412 TCAAAGTTGGATCTCGGAAAGC 58.926 45.455 0.00 0.00 0.00 3.51
129 130 1.726853 AAGTTGGATCTCGGAAAGCG 58.273 50.000 0.00 0.00 0.00 4.68
130 131 0.741221 AGTTGGATCTCGGAAAGCGC 60.741 55.000 0.00 0.00 0.00 5.92
131 132 1.809619 TTGGATCTCGGAAAGCGCG 60.810 57.895 0.00 0.00 0.00 6.86
132 133 2.962253 GGATCTCGGAAAGCGCGG 60.962 66.667 8.83 0.00 0.00 6.46
133 134 2.962253 GATCTCGGAAAGCGCGGG 60.962 66.667 8.83 0.00 0.00 6.13
145 146 3.637714 CGCGGGCGCACTATATTT 58.362 55.556 8.62 0.00 42.06 1.40
146 147 1.938861 CGCGGGCGCACTATATTTT 59.061 52.632 8.62 0.00 42.06 1.82
147 148 0.384230 CGCGGGCGCACTATATTTTG 60.384 55.000 8.62 0.00 42.06 2.44
148 149 0.941542 GCGGGCGCACTATATTTTGA 59.058 50.000 8.62 0.00 41.49 2.69
149 150 1.332375 GCGGGCGCACTATATTTTGAA 59.668 47.619 8.62 0.00 41.49 2.69
150 151 2.223386 GCGGGCGCACTATATTTTGAAA 60.223 45.455 8.62 0.00 41.49 2.69
151 152 3.550030 GCGGGCGCACTATATTTTGAAAT 60.550 43.478 8.62 0.00 41.49 2.17
152 153 3.974401 CGGGCGCACTATATTTTGAAATG 59.026 43.478 8.62 0.00 0.00 2.32
153 154 4.298332 GGGCGCACTATATTTTGAAATGG 58.702 43.478 10.83 0.00 0.00 3.16
154 155 4.037446 GGGCGCACTATATTTTGAAATGGA 59.963 41.667 10.83 0.00 0.00 3.41
155 156 5.215160 GGCGCACTATATTTTGAAATGGAG 58.785 41.667 10.83 0.06 0.00 3.86
156 157 5.215160 GCGCACTATATTTTGAAATGGAGG 58.785 41.667 0.30 0.00 0.00 4.30
157 158 5.762045 CGCACTATATTTTGAAATGGAGGG 58.238 41.667 0.00 0.00 0.00 4.30
158 159 5.530915 CGCACTATATTTTGAAATGGAGGGA 59.469 40.000 0.00 0.00 0.00 4.20
159 160 6.293626 CGCACTATATTTTGAAATGGAGGGAG 60.294 42.308 0.00 0.00 0.00 4.30
160 161 6.547510 GCACTATATTTTGAAATGGAGGGAGT 59.452 38.462 0.00 0.00 0.00 3.85
161 162 7.719633 GCACTATATTTTGAAATGGAGGGAGTA 59.280 37.037 0.00 0.00 0.00 2.59
162 163 9.799106 CACTATATTTTGAAATGGAGGGAGTAT 57.201 33.333 0.00 0.00 0.00 2.12
167 168 8.697507 ATTTTGAAATGGAGGGAGTATATGTC 57.302 34.615 0.00 0.00 0.00 3.06
168 169 7.451731 TTTGAAATGGAGGGAGTATATGTCT 57.548 36.000 0.00 0.00 0.00 3.41
169 170 6.672266 TGAAATGGAGGGAGTATATGTCTC 57.328 41.667 0.00 0.00 0.00 3.36
170 171 5.243954 TGAAATGGAGGGAGTATATGTCTCG 59.756 44.000 0.00 0.00 33.26 4.04
171 172 3.878237 TGGAGGGAGTATATGTCTCGT 57.122 47.619 0.00 0.00 33.26 4.18
172 173 3.487372 TGGAGGGAGTATATGTCTCGTG 58.513 50.000 0.00 0.00 33.26 4.35
173 174 3.117625 TGGAGGGAGTATATGTCTCGTGT 60.118 47.826 0.00 0.00 33.26 4.49
174 175 4.103627 TGGAGGGAGTATATGTCTCGTGTA 59.896 45.833 0.00 0.00 33.26 2.90
175 176 4.696402 GGAGGGAGTATATGTCTCGTGTAG 59.304 50.000 0.00 0.00 33.26 2.74
176 177 5.512749 GGAGGGAGTATATGTCTCGTGTAGA 60.513 48.000 0.00 0.00 33.26 2.59
185 186 2.341257 GTCTCGTGTAGACGTAGGACA 58.659 52.381 20.62 0.00 45.05 4.02
186 187 2.093467 GTCTCGTGTAGACGTAGGACAC 59.907 54.545 20.62 14.14 45.05 3.67
187 188 1.396301 CTCGTGTAGACGTAGGACACC 59.604 57.143 12.54 0.00 46.20 4.16
188 189 0.095935 CGTGTAGACGTAGGACACCG 59.904 60.000 16.92 10.79 40.29 4.94
189 190 0.179179 GTGTAGACGTAGGACACCGC 60.179 60.000 13.47 0.00 37.99 5.68
190 191 0.321919 TGTAGACGTAGGACACCGCT 60.322 55.000 0.00 0.00 0.00 5.52
191 192 0.807496 GTAGACGTAGGACACCGCTT 59.193 55.000 0.00 0.00 0.00 4.68
192 193 0.806868 TAGACGTAGGACACCGCTTG 59.193 55.000 0.00 0.00 0.00 4.01
193 194 1.177256 AGACGTAGGACACCGCTTGT 61.177 55.000 0.00 0.00 43.10 3.16
205 206 4.947147 GCTTGTCACCGGCCACCA 62.947 66.667 0.00 0.00 0.00 4.17
206 207 2.978010 CTTGTCACCGGCCACCAC 60.978 66.667 0.00 0.00 0.00 4.16
207 208 3.476031 CTTGTCACCGGCCACCACT 62.476 63.158 0.00 0.00 0.00 4.00
208 209 2.107041 CTTGTCACCGGCCACCACTA 62.107 60.000 0.00 0.00 0.00 2.74
209 210 1.697082 TTGTCACCGGCCACCACTAA 61.697 55.000 0.00 0.00 0.00 2.24
210 211 1.375523 GTCACCGGCCACCACTAAG 60.376 63.158 0.00 0.00 0.00 2.18
211 212 2.046314 CACCGGCCACCACTAAGG 60.046 66.667 0.00 0.00 45.67 2.69
219 220 1.686355 CCACCACTAAGGCACAAACA 58.314 50.000 0.00 0.00 43.14 2.83
220 221 2.238521 CCACCACTAAGGCACAAACAT 58.761 47.619 0.00 0.00 43.14 2.71
221 222 2.030007 CCACCACTAAGGCACAAACATG 60.030 50.000 0.00 0.00 43.14 3.21
222 223 1.613437 ACCACTAAGGCACAAACATGC 59.387 47.619 0.00 0.00 45.34 4.06
231 232 2.063266 GCACAAACATGCATCAGTTGG 58.937 47.619 14.72 9.63 45.39 3.77
232 233 2.679450 CACAAACATGCATCAGTTGGG 58.321 47.619 14.72 9.08 0.00 4.12
233 234 1.001181 ACAAACATGCATCAGTTGGGC 59.999 47.619 14.72 0.00 0.00 5.36
234 235 1.001068 CAAACATGCATCAGTTGGGCA 59.999 47.619 0.00 0.00 42.43 5.36
237 238 3.600187 ATGCATCAGTTGGGCATGA 57.400 47.368 0.00 0.00 45.80 3.07
238 239 2.082140 ATGCATCAGTTGGGCATGAT 57.918 45.000 0.00 0.00 45.80 2.45
239 240 2.732844 TGCATCAGTTGGGCATGATA 57.267 45.000 0.00 0.00 34.42 2.15
240 241 3.015675 TGCATCAGTTGGGCATGATAA 57.984 42.857 0.00 0.00 34.42 1.75
241 242 3.568443 TGCATCAGTTGGGCATGATAAT 58.432 40.909 0.00 0.00 34.42 1.28
242 243 3.319689 TGCATCAGTTGGGCATGATAATG 59.680 43.478 0.00 0.00 34.42 1.90
243 244 3.319972 GCATCAGTTGGGCATGATAATGT 59.680 43.478 0.00 0.00 34.42 2.71
244 245 4.202182 GCATCAGTTGGGCATGATAATGTT 60.202 41.667 0.00 0.00 34.42 2.71
245 246 4.987408 TCAGTTGGGCATGATAATGTTG 57.013 40.909 0.00 0.00 0.00 3.33
246 247 4.598022 TCAGTTGGGCATGATAATGTTGA 58.402 39.130 0.00 0.00 0.00 3.18
247 248 5.015515 TCAGTTGGGCATGATAATGTTGAA 58.984 37.500 0.00 0.00 0.00 2.69
248 249 5.125900 TCAGTTGGGCATGATAATGTTGAAG 59.874 40.000 0.00 0.00 0.00 3.02
249 250 5.018809 AGTTGGGCATGATAATGTTGAAGT 58.981 37.500 0.00 0.00 0.00 3.01
250 251 5.481473 AGTTGGGCATGATAATGTTGAAGTT 59.519 36.000 0.00 0.00 0.00 2.66
251 252 5.581126 TGGGCATGATAATGTTGAAGTTC 57.419 39.130 0.00 0.00 0.00 3.01
252 253 4.096231 TGGGCATGATAATGTTGAAGTTCG 59.904 41.667 0.00 0.00 0.00 3.95
253 254 4.335315 GGGCATGATAATGTTGAAGTTCGA 59.665 41.667 0.00 0.00 0.00 3.71
254 255 5.163663 GGGCATGATAATGTTGAAGTTCGAA 60.164 40.000 0.00 0.00 0.00 3.71
255 256 5.739161 GGCATGATAATGTTGAAGTTCGAAC 59.261 40.000 20.71 20.71 0.00 3.95
256 257 6.314018 GCATGATAATGTTGAAGTTCGAACA 58.686 36.000 28.78 17.41 36.54 3.18
257 258 6.801377 GCATGATAATGTTGAAGTTCGAACAA 59.199 34.615 28.78 12.85 35.76 2.83
258 259 7.325821 GCATGATAATGTTGAAGTTCGAACAAA 59.674 33.333 28.78 17.06 35.76 2.83
259 260 8.843733 CATGATAATGTTGAAGTTCGAACAAAG 58.156 33.333 28.78 3.38 35.76 2.77
260 261 7.925993 TGATAATGTTGAAGTTCGAACAAAGT 58.074 30.769 28.78 11.76 35.76 2.66
261 262 9.047371 TGATAATGTTGAAGTTCGAACAAAGTA 57.953 29.630 28.78 8.42 35.76 2.24
262 263 9.872757 GATAATGTTGAAGTTCGAACAAAGTAA 57.127 29.630 28.78 13.64 35.76 2.24
264 265 8.614994 AATGTTGAAGTTCGAACAAAGTAAAG 57.385 30.769 28.78 0.00 35.76 1.85
265 266 7.136289 TGTTGAAGTTCGAACAAAGTAAAGT 57.864 32.000 28.78 3.04 0.00 2.66
266 267 8.254178 TGTTGAAGTTCGAACAAAGTAAAGTA 57.746 30.769 28.78 3.90 0.00 2.24
267 268 8.170553 TGTTGAAGTTCGAACAAAGTAAAGTAC 58.829 33.333 28.78 12.69 0.00 2.73
268 269 7.830940 TGAAGTTCGAACAAAGTAAAGTACA 57.169 32.000 28.78 9.42 0.00 2.90
269 270 7.678226 TGAAGTTCGAACAAAGTAAAGTACAC 58.322 34.615 28.78 0.00 0.00 2.90
270 271 7.331440 TGAAGTTCGAACAAAGTAAAGTACACA 59.669 33.333 28.78 5.27 0.00 3.72
271 272 7.781548 AGTTCGAACAAAGTAAAGTACACAT 57.218 32.000 28.78 0.00 0.00 3.21
272 273 7.848491 AGTTCGAACAAAGTAAAGTACACATC 58.152 34.615 28.78 0.00 0.00 3.06
273 274 7.709613 AGTTCGAACAAAGTAAAGTACACATCT 59.290 33.333 28.78 0.00 0.00 2.90
274 275 8.971321 GTTCGAACAAAGTAAAGTACACATCTA 58.029 33.333 23.12 0.00 0.00 1.98
275 276 8.511465 TCGAACAAAGTAAAGTACACATCTAC 57.489 34.615 0.00 0.00 0.00 2.59
276 277 8.355169 TCGAACAAAGTAAAGTACACATCTACT 58.645 33.333 0.00 0.00 0.00 2.57
277 278 8.425491 CGAACAAAGTAAAGTACACATCTACTG 58.575 37.037 0.00 0.00 0.00 2.74
278 279 9.257651 GAACAAAGTAAAGTACACATCTACTGT 57.742 33.333 0.00 0.00 39.20 3.55
302 303 5.600696 AGTATGTTTGAACTTTGGCCTTTG 58.399 37.500 3.32 0.00 0.00 2.77
339 343 4.630894 TTCAAACAAGTTGCTAGTGGTG 57.369 40.909 1.81 0.00 37.13 4.17
344 348 1.726791 CAAGTTGCTAGTGGTGCTACG 59.273 52.381 0.00 0.00 40.14 3.51
402 406 2.465055 AAAGGTGGCCTGCTCGTACC 62.465 60.000 3.32 0.07 32.13 3.34
408 412 2.363795 CCTGCTCGTACCTCCCCA 60.364 66.667 0.00 0.00 0.00 4.96
438 442 8.530804 AAGAATGCAGCTTAGGATCTAAAAAT 57.469 30.769 3.01 0.00 0.00 1.82
440 444 9.804977 AGAATGCAGCTTAGGATCTAAAAATAT 57.195 29.630 0.00 0.00 0.00 1.28
441 445 9.837525 GAATGCAGCTTAGGATCTAAAAATATG 57.162 33.333 0.00 0.00 0.00 1.78
442 446 8.930846 ATGCAGCTTAGGATCTAAAAATATGT 57.069 30.769 0.00 0.00 0.00 2.29
445 449 8.447053 GCAGCTTAGGATCTAAAAATATGTAGC 58.553 37.037 0.00 0.00 0.00 3.58
446 450 9.717942 CAGCTTAGGATCTAAAAATATGTAGCT 57.282 33.333 0.00 0.00 33.40 3.32
556 562 1.145819 GCTCTCCATCTGTCCAGCC 59.854 63.158 0.00 0.00 0.00 4.85
582 588 1.831286 TATCCCTCCCGACGCTTCC 60.831 63.158 0.00 0.00 0.00 3.46
583 589 2.294170 TATCCCTCCCGACGCTTCCT 62.294 60.000 0.00 0.00 0.00 3.36
584 590 3.839432 CCCTCCCGACGCTTCCTC 61.839 72.222 0.00 0.00 0.00 3.71
604 610 4.023707 CCTCATTTATTTCCACTGATCGCC 60.024 45.833 0.00 0.00 0.00 5.54
637 643 0.928922 CAAAAACTGCATGCAACGCA 59.071 45.000 22.88 12.97 44.86 5.24
658 664 3.761481 CGAAAAGCAAGCAGACCAG 57.239 52.632 0.00 0.00 0.00 4.00
659 665 0.386478 CGAAAAGCAAGCAGACCAGC 60.386 55.000 0.00 0.00 0.00 4.85
683 689 2.849880 GCAGCGGCTCATTTAAATCA 57.150 45.000 0.00 0.00 36.96 2.57
706 730 1.542915 CTCCAAACCACCATCAGCAAG 59.457 52.381 0.00 0.00 0.00 4.01
709 733 1.526575 AAACCACCATCAGCAAGGCG 61.527 55.000 0.00 0.00 0.00 5.52
717 764 1.267806 CATCAGCAAGGCGAAGTGTTT 59.732 47.619 0.00 0.00 0.00 2.83
736 783 1.574134 TTTCAAACTCGGTCACGGTC 58.426 50.000 0.00 0.00 41.39 4.79
737 784 0.748450 TTCAAACTCGGTCACGGTCT 59.252 50.000 0.00 0.00 41.39 3.85
738 785 1.608055 TCAAACTCGGTCACGGTCTA 58.392 50.000 0.00 0.00 41.39 2.59
739 786 2.165167 TCAAACTCGGTCACGGTCTAT 58.835 47.619 0.00 0.00 41.39 1.98
740 787 2.163010 TCAAACTCGGTCACGGTCTATC 59.837 50.000 0.00 0.00 41.39 2.08
741 788 2.125773 AACTCGGTCACGGTCTATCT 57.874 50.000 0.00 0.00 41.39 1.98
742 789 1.380524 ACTCGGTCACGGTCTATCTG 58.619 55.000 0.00 0.00 41.39 2.90
743 790 1.065636 ACTCGGTCACGGTCTATCTGA 60.066 52.381 0.00 0.00 41.39 3.27
744 791 2.014857 CTCGGTCACGGTCTATCTGAA 58.985 52.381 0.00 0.00 41.39 3.02
745 792 2.014857 TCGGTCACGGTCTATCTGAAG 58.985 52.381 0.00 0.00 41.39 3.02
746 793 1.743958 CGGTCACGGTCTATCTGAAGT 59.256 52.381 0.00 0.00 36.18 3.01
750 797 0.824759 ACGGTCTATCTGAAGTGGGC 59.175 55.000 0.00 0.00 0.00 5.36
785 832 6.432472 AGCAAAATTCCAACAAAGTCCAAAAA 59.568 30.769 0.00 0.00 0.00 1.94
795 842 4.566360 ACAAAGTCCAAAAAGCAAATCACG 59.434 37.500 0.00 0.00 0.00 4.35
820 867 1.059913 ACCACAGAGAAAGGGTCCAG 58.940 55.000 0.00 0.00 0.00 3.86
821 868 0.322008 CCACAGAGAAAGGGTCCAGC 60.322 60.000 0.00 0.00 0.00 4.85
822 869 0.689623 CACAGAGAAAGGGTCCAGCT 59.310 55.000 0.00 0.00 0.00 4.24
823 870 0.980423 ACAGAGAAAGGGTCCAGCTC 59.020 55.000 0.00 0.00 0.00 4.09
824 871 1.274712 CAGAGAAAGGGTCCAGCTCT 58.725 55.000 0.00 0.00 36.44 4.09
864 911 3.791539 GCACTCGCCACTCATCAG 58.208 61.111 0.00 0.00 0.00 2.90
865 912 1.216444 GCACTCGCCACTCATCAGA 59.784 57.895 0.00 0.00 0.00 3.27
897 944 5.552430 ATTTAAATCCTCCCTCCAAACCT 57.448 39.130 0.00 0.00 0.00 3.50
901 948 0.104144 TCCTCCCTCCAAACCTCCAA 60.104 55.000 0.00 0.00 0.00 3.53
902 949 0.777446 CCTCCCTCCAAACCTCCAAA 59.223 55.000 0.00 0.00 0.00 3.28
903 950 1.547901 CCTCCCTCCAAACCTCCAAAC 60.548 57.143 0.00 0.00 0.00 2.93
904 951 0.481128 TCCCTCCAAACCTCCAAACC 59.519 55.000 0.00 0.00 0.00 3.27
905 952 0.482887 CCCTCCAAACCTCCAAACCT 59.517 55.000 0.00 0.00 0.00 3.50
906 953 1.547901 CCCTCCAAACCTCCAAACCTC 60.548 57.143 0.00 0.00 0.00 3.85
907 954 1.547901 CCTCCAAACCTCCAAACCTCC 60.548 57.143 0.00 0.00 0.00 4.30
908 955 1.144913 CTCCAAACCTCCAAACCTCCA 59.855 52.381 0.00 0.00 0.00 3.86
914 961 0.537371 CCTCCAAACCTCCACCACAC 60.537 60.000 0.00 0.00 0.00 3.82
944 991 3.136443 TGGTCCATAGATTAAGCACCAGG 59.864 47.826 0.00 0.00 0.00 4.45
977 1044 3.162858 ACCACGAAACCCCCGTCA 61.163 61.111 0.00 0.00 38.29 4.35
1173 1249 2.776913 GGAGGAGAAGAGGGCGACG 61.777 68.421 0.00 0.00 0.00 5.12
1174 1250 1.749638 GAGGAGAAGAGGGCGACGA 60.750 63.158 0.00 0.00 0.00 4.20
1175 1251 1.995646 GAGGAGAAGAGGGCGACGAC 61.996 65.000 0.00 0.00 0.00 4.34
1551 1635 1.842010 CTAATCCCCGTCCTCCCCC 60.842 68.421 0.00 0.00 0.00 5.40
1617 1701 8.067751 AGTAGTGTGATTAGTTGCTGAGATTA 57.932 34.615 0.00 0.00 0.00 1.75
1621 1705 5.582269 TGTGATTAGTTGCTGAGATTAGTGC 59.418 40.000 0.00 0.00 0.00 4.40
1858 1946 1.406477 GGTACATGACGTTCCCCTTCC 60.406 57.143 0.00 0.00 0.00 3.46
1949 2038 3.925090 GGTCGCCGATGTAGGGGG 61.925 72.222 0.00 0.00 43.55 5.40
2154 2247 0.524862 CAAGAACCAGTCCATGCAGC 59.475 55.000 0.00 0.00 0.00 5.25
2240 2334 6.921307 ACTTGAATGGATTCGTTTAAACCAAC 59.079 34.615 12.66 4.63 42.69 3.77
2339 2435 1.406539 GAGAAGAGGAGCAGAGCTGAG 59.593 57.143 0.85 0.00 39.88 3.35
2413 2509 7.667219 TCAAGAAACTTATTGAGCCTTCAGATT 59.333 33.333 0.00 0.00 33.88 2.40
2481 2581 3.389983 TCAGTACCTAAAAGGCAGTGTGT 59.610 43.478 1.81 0.00 39.63 3.72
2488 2588 5.175127 CCTAAAAGGCAGTGTGTTTGTTTT 58.825 37.500 0.00 0.00 0.00 2.43
2623 2727 3.565905 AAATTTCTGCTCCTGCTTTCG 57.434 42.857 0.00 0.00 40.48 3.46
2766 2882 2.029918 TCAGGTAAGCCATCGATCATCG 60.030 50.000 0.00 0.00 38.10 3.84
2772 2888 0.037326 GCCATCGATCATCGCCCTTA 60.037 55.000 0.80 0.00 40.21 2.69
2813 2933 5.117745 TCGTCGATCGTATGTAACTAGTAGC 59.882 44.000 15.94 0.00 40.80 3.58
3094 3216 0.606604 TGTTCGTCTGCTTACCCTCC 59.393 55.000 0.00 0.00 0.00 4.30
3159 3281 1.445582 GTGGTACTCCCTGCGTTCG 60.446 63.158 0.00 0.00 0.00 3.95
3203 3328 5.122869 CGATTTTGATGAACTGATGGACTGT 59.877 40.000 0.00 0.00 0.00 3.55
3241 3366 4.864334 CCGGAGCTGGTCATGCCC 62.864 72.222 9.30 0.00 36.04 5.36
3247 3372 2.440796 CTGGTCATGCCCGGCAAT 60.441 61.111 18.00 2.12 43.62 3.56
3250 3375 1.453015 GGTCATGCCCGGCAATGTA 60.453 57.895 18.00 0.00 43.62 2.29
3253 3378 0.034574 TCATGCCCGGCAATGTACTT 60.035 50.000 18.00 0.00 43.62 2.24
3286 3411 2.031682 CAGTTACTGTCACTGCCAAAGC 60.032 50.000 9.00 0.00 35.52 3.51
3298 3423 1.876497 GCCAAAGCGCCAAGGATGAA 61.876 55.000 2.29 0.00 0.00 2.57
3304 3429 0.107945 GCGCCAAGGATGAAGAGAGT 60.108 55.000 0.00 0.00 0.00 3.24
3313 3438 1.548357 ATGAAGAGAGTGGCGCCAGT 61.548 55.000 36.43 36.43 0.00 4.00
3326 3451 1.649664 CGCCAGTCAGGAGAGATTTG 58.350 55.000 0.00 0.00 40.01 2.32
3343 3468 2.760385 GGAGGGGAGTGGTCGGAG 60.760 72.222 0.00 0.00 0.00 4.63
3410 3540 2.299521 CTAAGCAGCGAGTAGGTAGGT 58.700 52.381 0.00 0.00 0.00 3.08
3411 3541 2.431954 AAGCAGCGAGTAGGTAGGTA 57.568 50.000 0.00 0.00 0.00 3.08
3413 3543 2.946785 AGCAGCGAGTAGGTAGGTATT 58.053 47.619 0.00 0.00 0.00 1.89
3415 3545 4.467769 AGCAGCGAGTAGGTAGGTATTTA 58.532 43.478 0.00 0.00 0.00 1.40
3418 3548 6.718454 AGCAGCGAGTAGGTAGGTATTTATTA 59.282 38.462 0.00 0.00 0.00 0.98
3423 3553 8.316640 CGAGTAGGTAGGTATTTATTACTCGT 57.683 38.462 17.93 0.00 46.64 4.18
3425 3555 8.628630 AGTAGGTAGGTATTTATTACTCGTCC 57.371 38.462 0.00 0.00 0.00 4.79
3433 3563 7.704047 AGGTATTTATTACTCGTCCGTTCTTTC 59.296 37.037 0.00 0.00 0.00 2.62
3434 3564 5.997732 TTTATTACTCGTCCGTTCTTTCG 57.002 39.130 0.00 0.00 0.00 3.46
3435 3565 3.565905 ATTACTCGTCCGTTCTTTCGT 57.434 42.857 0.00 0.00 0.00 3.85
3436 3566 2.320805 TACTCGTCCGTTCTTTCGTG 57.679 50.000 0.00 0.00 0.00 4.35
3437 3567 0.938168 ACTCGTCCGTTCTTTCGTGC 60.938 55.000 0.00 0.00 0.00 5.34
3438 3568 0.937699 CTCGTCCGTTCTTTCGTGCA 60.938 55.000 0.00 0.00 0.00 4.57
3439 3569 0.937699 TCGTCCGTTCTTTCGTGCAG 60.938 55.000 0.00 0.00 0.00 4.41
3440 3570 1.204312 GTCCGTTCTTTCGTGCAGC 59.796 57.895 0.00 0.00 0.00 5.25
3441 3571 1.227409 TCCGTTCTTTCGTGCAGCA 60.227 52.632 0.00 0.00 0.00 4.41
3442 3572 0.602638 TCCGTTCTTTCGTGCAGCAT 60.603 50.000 0.00 0.00 0.00 3.79
3443 3573 0.179215 CCGTTCTTTCGTGCAGCATC 60.179 55.000 0.00 0.00 0.00 3.91
3444 3574 0.512518 CGTTCTTTCGTGCAGCATCA 59.487 50.000 0.00 0.00 0.00 3.07
3445 3575 1.463034 CGTTCTTTCGTGCAGCATCAG 60.463 52.381 0.00 0.00 0.00 2.90
3446 3576 1.800586 GTTCTTTCGTGCAGCATCAGA 59.199 47.619 0.00 0.00 0.00 3.27
3447 3577 2.168326 TCTTTCGTGCAGCATCAGAA 57.832 45.000 0.00 2.46 0.00 3.02
3448 3578 2.493035 TCTTTCGTGCAGCATCAGAAA 58.507 42.857 17.22 17.22 0.00 2.52
3449 3579 2.877786 TCTTTCGTGCAGCATCAGAAAA 59.122 40.909 18.18 10.64 31.55 2.29
3450 3580 2.686558 TTCGTGCAGCATCAGAAAAC 57.313 45.000 0.00 0.00 0.00 2.43
3451 3581 0.874390 TCGTGCAGCATCAGAAAACC 59.126 50.000 0.00 0.00 0.00 3.27
3452 3582 0.453282 CGTGCAGCATCAGAAAACCG 60.453 55.000 0.00 0.00 0.00 4.44
3453 3583 0.109597 GTGCAGCATCAGAAAACCGG 60.110 55.000 0.00 0.00 0.00 5.28
3454 3584 1.153958 GCAGCATCAGAAAACCGGC 60.154 57.895 0.00 0.00 0.00 6.13
3455 3585 1.589716 GCAGCATCAGAAAACCGGCT 61.590 55.000 0.00 0.00 0.00 5.52
3456 3586 0.169672 CAGCATCAGAAAACCGGCTG 59.830 55.000 0.00 0.00 42.14 4.85
3457 3587 1.153958 GCATCAGAAAACCGGCTGC 60.154 57.895 0.00 0.00 32.27 5.25
3458 3588 1.508088 CATCAGAAAACCGGCTGCC 59.492 57.895 9.11 9.11 32.27 4.85
3460 3590 2.748058 ATCAGAAAACCGGCTGCCGT 62.748 55.000 35.82 22.63 46.80 5.68
3461 3591 2.668550 AGAAAACCGGCTGCCGTC 60.669 61.111 35.82 26.75 46.80 4.79
3462 3592 2.668550 GAAAACCGGCTGCCGTCT 60.669 61.111 35.82 21.56 46.80 4.18
3463 3593 1.375013 GAAAACCGGCTGCCGTCTA 60.375 57.895 35.82 0.00 46.80 2.59
3464 3594 1.632948 GAAAACCGGCTGCCGTCTAC 61.633 60.000 35.82 20.18 46.80 2.59
3465 3595 2.386064 AAAACCGGCTGCCGTCTACA 62.386 55.000 35.82 0.00 46.80 2.74
3466 3596 2.386064 AAACCGGCTGCCGTCTACAA 62.386 55.000 35.82 0.00 46.80 2.41
3467 3597 2.813908 CCGGCTGCCGTCTACAAC 60.814 66.667 35.82 0.00 46.80 3.32
3468 3598 2.813908 CGGCTGCCGTCTACAACC 60.814 66.667 31.72 0.00 42.73 3.77
3469 3599 2.345991 GGCTGCCGTCTACAACCA 59.654 61.111 1.35 0.00 0.00 3.67
3470 3600 1.741770 GGCTGCCGTCTACAACCAG 60.742 63.158 1.35 0.00 0.00 4.00
3471 3601 1.741770 GCTGCCGTCTACAACCAGG 60.742 63.158 0.00 0.00 0.00 4.45
3472 3602 1.972198 CTGCCGTCTACAACCAGGA 59.028 57.895 0.00 0.00 0.00 3.86
3473 3603 0.537188 CTGCCGTCTACAACCAGGAT 59.463 55.000 0.00 0.00 0.00 3.24
3474 3604 0.249120 TGCCGTCTACAACCAGGATG 59.751 55.000 0.00 0.00 0.00 3.51
3486 3616 3.658398 CAGGATGGCAGGAACACTT 57.342 52.632 0.00 0.00 0.00 3.16
3502 3632 2.158623 ACACTTCAATCTGTTGCCAGGA 60.159 45.455 0.00 0.00 39.31 3.86
3503 3633 3.087031 CACTTCAATCTGTTGCCAGGAT 58.913 45.455 0.00 0.00 39.31 3.24
3504 3634 3.508793 CACTTCAATCTGTTGCCAGGATT 59.491 43.478 0.00 0.00 39.31 3.01
3505 3635 3.760684 ACTTCAATCTGTTGCCAGGATTC 59.239 43.478 0.00 0.00 39.31 2.52
3517 3648 2.483889 GCCAGGATTCTAAGGAGAACCG 60.484 54.545 0.00 0.00 44.50 4.44
3518 3649 2.103263 CCAGGATTCTAAGGAGAACCGG 59.897 54.545 0.00 0.00 44.50 5.28
3522 3653 0.249398 TTCTAAGGAGAACCGGCTGC 59.751 55.000 0.00 0.00 36.75 5.25
3597 3745 8.300286 TGCAAAATTAGATGTCCGTATCAAAAA 58.700 29.630 0.00 0.00 0.00 1.94
3605 3753 6.932400 AGATGTCCGTATCAAAAACAGTAACA 59.068 34.615 0.00 0.00 0.00 2.41
3621 3769 0.190815 AACAGGTTTGGGCCAGGATT 59.809 50.000 6.23 0.00 0.00 3.01
3654 3802 8.293157 GGATTTTCTTGTATAATCCAAGCTAGC 58.707 37.037 6.62 6.62 44.30 3.42
3655 3803 8.752005 ATTTTCTTGTATAATCCAAGCTAGCA 57.248 30.769 18.83 0.00 39.30 3.49
3659 3807 5.947228 TGTATAATCCAAGCTAGCAATGC 57.053 39.130 18.83 0.00 0.00 3.56
3663 3811 2.484062 CCAAGCTAGCAATGCCCGG 61.484 63.158 18.83 0.00 0.00 5.73
3664 3812 1.750399 CAAGCTAGCAATGCCCGGT 60.750 57.895 18.83 0.00 0.00 5.28
3665 3813 0.463654 CAAGCTAGCAATGCCCGGTA 60.464 55.000 18.83 0.00 0.00 4.02
3666 3814 0.474184 AAGCTAGCAATGCCCGGTAT 59.526 50.000 18.83 0.00 0.00 2.73
3667 3815 1.348064 AGCTAGCAATGCCCGGTATA 58.652 50.000 18.83 0.00 0.00 1.47
3668 3816 1.909302 AGCTAGCAATGCCCGGTATAT 59.091 47.619 18.83 0.00 0.00 0.86
3669 3817 2.093447 AGCTAGCAATGCCCGGTATATC 60.093 50.000 18.83 0.00 0.00 1.63
3670 3818 2.354704 GCTAGCAATGCCCGGTATATCA 60.355 50.000 10.63 0.00 0.00 2.15
3671 3819 3.682718 GCTAGCAATGCCCGGTATATCAT 60.683 47.826 10.63 0.00 0.00 2.45
3672 3820 2.991250 AGCAATGCCCGGTATATCATC 58.009 47.619 0.00 0.00 0.00 2.92
3673 3821 2.305635 AGCAATGCCCGGTATATCATCA 59.694 45.455 0.00 0.00 0.00 3.07
3674 3822 2.679837 GCAATGCCCGGTATATCATCAG 59.320 50.000 0.00 0.00 0.00 2.90
3675 3823 3.619733 GCAATGCCCGGTATATCATCAGA 60.620 47.826 0.00 0.00 0.00 3.27
3676 3824 4.578871 CAATGCCCGGTATATCATCAGAA 58.421 43.478 0.00 0.00 0.00 3.02
3677 3825 3.678056 TGCCCGGTATATCATCAGAAC 57.322 47.619 0.00 0.00 0.00 3.01
3678 3826 3.239449 TGCCCGGTATATCATCAGAACT 58.761 45.455 0.00 0.00 0.00 3.01
3679 3827 3.006859 TGCCCGGTATATCATCAGAACTG 59.993 47.826 0.00 0.00 0.00 3.16
3680 3828 3.258372 GCCCGGTATATCATCAGAACTGA 59.742 47.826 6.98 6.98 44.59 3.41
3695 3843 7.381766 TCAGAACTGATGTTTACCATTGATG 57.618 36.000 0.00 0.00 36.39 3.07
3696 3844 6.032094 CAGAACTGATGTTTACCATTGATGC 58.968 40.000 0.00 0.00 36.39 3.91
3697 3845 5.711506 AGAACTGATGTTTACCATTGATGCA 59.288 36.000 0.00 0.00 36.39 3.96
3703 3851 7.650890 TGATGTTTACCATTGATGCATATCAC 58.349 34.615 0.00 0.00 42.79 3.06
3705 3853 5.008514 TGTTTACCATTGATGCATATCACCG 59.991 40.000 0.00 0.00 42.79 4.94
3729 3877 5.633830 AACTGATGTTCCAATGATCACAC 57.366 39.130 0.00 0.00 0.00 3.82
3730 3878 4.654915 ACTGATGTTCCAATGATCACACA 58.345 39.130 0.00 0.00 0.00 3.72
3731 3879 5.072055 ACTGATGTTCCAATGATCACACAA 58.928 37.500 0.00 0.00 0.00 3.33
3732 3880 5.048504 ACTGATGTTCCAATGATCACACAAC 60.049 40.000 0.00 0.00 0.00 3.32
3733 3881 4.826183 TGATGTTCCAATGATCACACAACA 59.174 37.500 0.00 5.71 0.00 3.33
3734 3882 5.301298 TGATGTTCCAATGATCACACAACAA 59.699 36.000 12.72 0.00 0.00 2.83
3735 3883 5.588958 TGTTCCAATGATCACACAACAAA 57.411 34.783 0.00 0.00 0.00 2.83
3736 3884 5.970592 TGTTCCAATGATCACACAACAAAA 58.029 33.333 0.00 0.00 0.00 2.44
3737 3885 6.041511 TGTTCCAATGATCACACAACAAAAG 58.958 36.000 0.00 0.00 0.00 2.27
3738 3886 5.199024 TCCAATGATCACACAACAAAAGG 57.801 39.130 0.00 0.00 0.00 3.11
3739 3887 4.039004 TCCAATGATCACACAACAAAAGGG 59.961 41.667 0.00 0.00 0.00 3.95
3740 3888 4.039004 CCAATGATCACACAACAAAAGGGA 59.961 41.667 0.00 0.00 0.00 4.20
3741 3889 5.453057 CCAATGATCACACAACAAAAGGGAA 60.453 40.000 0.00 0.00 0.00 3.97
3742 3890 5.867903 ATGATCACACAACAAAAGGGAAA 57.132 34.783 0.00 0.00 0.00 3.13
3743 3891 5.004922 TGATCACACAACAAAAGGGAAAC 57.995 39.130 0.00 0.00 0.00 2.78
3744 3892 4.464244 TGATCACACAACAAAAGGGAAACA 59.536 37.500 0.00 0.00 0.00 2.83
3745 3893 4.873746 TCACACAACAAAAGGGAAACAA 57.126 36.364 0.00 0.00 0.00 2.83
3746 3894 4.561105 TCACACAACAAAAGGGAAACAAC 58.439 39.130 0.00 0.00 0.00 3.32
3747 3895 4.039245 TCACACAACAAAAGGGAAACAACA 59.961 37.500 0.00 0.00 0.00 3.33
3748 3896 4.934602 CACACAACAAAAGGGAAACAACAT 59.065 37.500 0.00 0.00 0.00 2.71
3749 3897 5.411053 CACACAACAAAAGGGAAACAACATT 59.589 36.000 0.00 0.00 0.00 2.71
3750 3898 6.000840 ACACAACAAAAGGGAAACAACATTT 58.999 32.000 0.00 0.00 0.00 2.32
3751 3899 6.148645 ACACAACAAAAGGGAAACAACATTTC 59.851 34.615 0.00 0.00 0.00 2.17
3752 3900 6.148480 CACAACAAAAGGGAAACAACATTTCA 59.852 34.615 2.14 0.00 0.00 2.69
3753 3901 6.371271 ACAACAAAAGGGAAACAACATTTCAG 59.629 34.615 2.14 0.00 0.00 3.02
3754 3902 4.875536 ACAAAAGGGAAACAACATTTCAGC 59.124 37.500 2.14 0.00 0.00 4.26
3755 3903 4.751767 AAAGGGAAACAACATTTCAGCA 57.248 36.364 2.14 0.00 0.00 4.41
3845 4043 1.878953 AAAGGTGTTGTAGCCACTCG 58.121 50.000 0.00 0.00 33.31 4.18
3846 4044 0.756903 AAGGTGTTGTAGCCACTCGT 59.243 50.000 0.00 0.00 33.31 4.18
3907 4105 1.774254 ACTGTCATGGTCCCACAAAGA 59.226 47.619 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.037419 ATTTTTGCTTCCGCCGCAAT 60.037 45.000 5.33 0.00 45.67 3.56
1 2 0.249657 AATTTTTGCTTCCGCCGCAA 60.250 45.000 0.00 0.00 44.83 4.85
2 3 0.598562 TAATTTTTGCTTCCGCCGCA 59.401 45.000 0.00 0.00 35.22 5.69
3 4 1.921243 ATAATTTTTGCTTCCGCCGC 58.079 45.000 0.00 0.00 34.43 6.53
4 5 4.854399 TGATATAATTTTTGCTTCCGCCG 58.146 39.130 0.00 0.00 34.43 6.46
5 6 5.687285 CACTGATATAATTTTTGCTTCCGCC 59.313 40.000 0.00 0.00 34.43 6.13
6 7 6.494842 TCACTGATATAATTTTTGCTTCCGC 58.505 36.000 0.00 0.00 0.00 5.54
7 8 9.520204 AATTCACTGATATAATTTTTGCTTCCG 57.480 29.630 0.00 0.00 0.00 4.30
65 66 1.527380 AACTGCGGCGGGAGAAAAA 60.527 52.632 19.55 0.00 35.29 1.94
66 67 2.112297 AACTGCGGCGGGAGAAAA 59.888 55.556 19.55 0.00 35.29 2.29
67 68 2.668212 CAACTGCGGCGGGAGAAA 60.668 61.111 19.55 0.00 35.29 2.52
68 69 4.697756 CCAACTGCGGCGGGAGAA 62.698 66.667 19.55 0.00 35.29 2.87
73 74 3.726517 CAAGACCAACTGCGGCGG 61.727 66.667 9.78 7.39 0.00 6.13
74 75 2.542907 AACAAGACCAACTGCGGCG 61.543 57.895 0.51 0.51 0.00 6.46
75 76 1.008538 CAACAAGACCAACTGCGGC 60.009 57.895 0.00 0.00 0.00 6.53
76 77 1.101049 ACCAACAAGACCAACTGCGG 61.101 55.000 0.00 0.00 0.00 5.69
77 78 0.738389 AACCAACAAGACCAACTGCG 59.262 50.000 0.00 0.00 0.00 5.18
78 79 4.379339 TTTAACCAACAAGACCAACTGC 57.621 40.909 0.00 0.00 0.00 4.40
79 80 8.977505 CATAAATTTAACCAACAAGACCAACTG 58.022 33.333 1.21 0.00 0.00 3.16
80 81 8.919145 TCATAAATTTAACCAACAAGACCAACT 58.081 29.630 1.21 0.00 0.00 3.16
81 82 9.705290 ATCATAAATTTAACCAACAAGACCAAC 57.295 29.630 1.21 0.00 0.00 3.77
82 83 9.921637 GATCATAAATTTAACCAACAAGACCAA 57.078 29.630 1.21 0.00 0.00 3.67
83 84 9.083422 TGATCATAAATTTAACCAACAAGACCA 57.917 29.630 1.21 0.00 0.00 4.02
84 85 9.921637 TTGATCATAAATTTAACCAACAAGACC 57.078 29.630 1.21 0.00 0.00 3.85
97 98 8.408601 CCGAGATCCAACTTTGATCATAAATTT 58.591 33.333 0.00 0.00 0.00 1.82
98 99 7.775093 TCCGAGATCCAACTTTGATCATAAATT 59.225 33.333 0.00 0.00 0.00 1.82
99 100 7.282585 TCCGAGATCCAACTTTGATCATAAAT 58.717 34.615 0.00 0.00 0.00 1.40
100 101 6.649155 TCCGAGATCCAACTTTGATCATAAA 58.351 36.000 0.00 0.00 0.00 1.40
101 102 6.233905 TCCGAGATCCAACTTTGATCATAA 57.766 37.500 0.00 0.00 0.00 1.90
102 103 5.869649 TCCGAGATCCAACTTTGATCATA 57.130 39.130 0.00 0.00 0.00 2.15
103 104 4.760530 TCCGAGATCCAACTTTGATCAT 57.239 40.909 0.00 0.00 0.00 2.45
104 105 4.551702 TTCCGAGATCCAACTTTGATCA 57.448 40.909 5.81 0.00 0.00 2.92
105 106 4.201861 GCTTTCCGAGATCCAACTTTGATC 60.202 45.833 0.00 0.00 0.00 2.92
106 107 3.691609 GCTTTCCGAGATCCAACTTTGAT 59.308 43.478 0.00 0.00 0.00 2.57
107 108 3.074412 GCTTTCCGAGATCCAACTTTGA 58.926 45.455 0.00 0.00 0.00 2.69
108 109 2.159653 CGCTTTCCGAGATCCAACTTTG 60.160 50.000 0.00 0.00 40.02 2.77
109 110 2.076863 CGCTTTCCGAGATCCAACTTT 58.923 47.619 0.00 0.00 40.02 2.66
110 111 1.726853 CGCTTTCCGAGATCCAACTT 58.273 50.000 0.00 0.00 40.02 2.66
111 112 0.741221 GCGCTTTCCGAGATCCAACT 60.741 55.000 0.00 0.00 40.02 3.16
112 113 1.716172 GCGCTTTCCGAGATCCAAC 59.284 57.895 0.00 0.00 40.02 3.77
113 114 1.809619 CGCGCTTTCCGAGATCCAA 60.810 57.895 5.56 0.00 39.21 3.53
114 115 2.202743 CGCGCTTTCCGAGATCCA 60.203 61.111 5.56 0.00 39.21 3.41
115 116 2.962253 CCGCGCTTTCCGAGATCC 60.962 66.667 5.56 0.00 39.21 3.36
116 117 2.962253 CCCGCGCTTTCCGAGATC 60.962 66.667 5.56 0.00 39.21 2.75
128 129 0.384230 CAAAATATAGTGCGCCCGCG 60.384 55.000 4.18 4.36 45.51 6.46
129 130 0.941542 TCAAAATATAGTGCGCCCGC 59.058 50.000 4.18 5.60 42.35 6.13
130 131 3.684103 TTTCAAAATATAGTGCGCCCG 57.316 42.857 4.18 0.00 0.00 6.13
131 132 4.037446 TCCATTTCAAAATATAGTGCGCCC 59.963 41.667 4.18 0.00 0.00 6.13
132 133 5.181690 TCCATTTCAAAATATAGTGCGCC 57.818 39.130 4.18 0.00 0.00 6.53
133 134 5.215160 CCTCCATTTCAAAATATAGTGCGC 58.785 41.667 0.00 0.00 0.00 6.09
134 135 5.530915 TCCCTCCATTTCAAAATATAGTGCG 59.469 40.000 0.00 0.00 0.00 5.34
135 136 6.547510 ACTCCCTCCATTTCAAAATATAGTGC 59.452 38.462 0.00 0.00 0.00 4.40
136 137 9.799106 ATACTCCCTCCATTTCAAAATATAGTG 57.201 33.333 0.00 0.00 0.00 2.74
141 142 9.793259 GACATATACTCCCTCCATTTCAAAATA 57.207 33.333 0.00 0.00 0.00 1.40
142 143 8.506083 AGACATATACTCCCTCCATTTCAAAAT 58.494 33.333 0.00 0.00 0.00 1.82
143 144 7.872138 AGACATATACTCCCTCCATTTCAAAA 58.128 34.615 0.00 0.00 0.00 2.44
144 145 7.451731 AGACATATACTCCCTCCATTTCAAA 57.548 36.000 0.00 0.00 0.00 2.69
145 146 6.239317 CGAGACATATACTCCCTCCATTTCAA 60.239 42.308 0.00 0.00 0.00 2.69
146 147 5.243954 CGAGACATATACTCCCTCCATTTCA 59.756 44.000 0.00 0.00 0.00 2.69
147 148 5.244178 ACGAGACATATACTCCCTCCATTTC 59.756 44.000 0.00 0.00 0.00 2.17
148 149 5.011125 CACGAGACATATACTCCCTCCATTT 59.989 44.000 0.00 0.00 0.00 2.32
149 150 4.524714 CACGAGACATATACTCCCTCCATT 59.475 45.833 0.00 0.00 0.00 3.16
150 151 4.082845 CACGAGACATATACTCCCTCCAT 58.917 47.826 0.00 0.00 0.00 3.41
151 152 3.117625 ACACGAGACATATACTCCCTCCA 60.118 47.826 0.00 0.00 0.00 3.86
152 153 3.488363 ACACGAGACATATACTCCCTCC 58.512 50.000 0.00 0.00 0.00 4.30
153 154 5.549347 TCTACACGAGACATATACTCCCTC 58.451 45.833 0.00 0.00 0.00 4.30
154 155 5.563876 TCTACACGAGACATATACTCCCT 57.436 43.478 0.00 0.00 0.00 4.20
170 171 0.179179 GCGGTGTCCTACGTCTACAC 60.179 60.000 15.76 15.76 42.17 2.90
171 172 0.321919 AGCGGTGTCCTACGTCTACA 60.322 55.000 0.00 0.00 0.00 2.74
172 173 0.807496 AAGCGGTGTCCTACGTCTAC 59.193 55.000 0.00 0.00 0.00 2.59
173 174 0.806868 CAAGCGGTGTCCTACGTCTA 59.193 55.000 0.00 0.00 0.00 2.59
174 175 1.177256 ACAAGCGGTGTCCTACGTCT 61.177 55.000 0.00 0.00 34.38 4.18
175 176 1.288127 ACAAGCGGTGTCCTACGTC 59.712 57.895 0.00 0.00 34.38 4.34
176 177 3.451665 ACAAGCGGTGTCCTACGT 58.548 55.556 0.00 0.00 34.38 3.57
188 189 4.947147 TGGTGGCCGGTGACAAGC 62.947 66.667 1.90 0.00 0.00 4.01
189 190 2.107041 TAGTGGTGGCCGGTGACAAG 62.107 60.000 1.90 0.00 0.00 3.16
190 191 1.697082 TTAGTGGTGGCCGGTGACAA 61.697 55.000 1.90 0.00 0.00 3.18
191 192 2.107041 CTTAGTGGTGGCCGGTGACA 62.107 60.000 1.90 0.00 0.00 3.58
192 193 1.375523 CTTAGTGGTGGCCGGTGAC 60.376 63.158 1.90 0.00 0.00 3.67
193 194 2.589157 CCTTAGTGGTGGCCGGTGA 61.589 63.158 1.90 0.00 0.00 4.02
194 195 2.046314 CCTTAGTGGTGGCCGGTG 60.046 66.667 1.90 0.00 0.00 4.94
195 196 4.029809 GCCTTAGTGGTGGCCGGT 62.030 66.667 1.90 0.00 43.11 5.28
200 201 1.686355 TGTTTGTGCCTTAGTGGTGG 58.314 50.000 0.00 0.00 38.35 4.61
201 202 2.607771 GCATGTTTGTGCCTTAGTGGTG 60.608 50.000 0.00 0.00 39.18 4.17
202 203 1.613437 GCATGTTTGTGCCTTAGTGGT 59.387 47.619 0.00 0.00 39.18 4.16
203 204 1.612950 TGCATGTTTGTGCCTTAGTGG 59.387 47.619 0.00 0.00 44.43 4.00
204 205 3.057386 TGATGCATGTTTGTGCCTTAGTG 60.057 43.478 2.46 0.00 44.43 2.74
205 206 3.156293 TGATGCATGTTTGTGCCTTAGT 58.844 40.909 2.46 0.00 44.43 2.24
206 207 3.192001 ACTGATGCATGTTTGTGCCTTAG 59.808 43.478 2.46 0.00 44.43 2.18
207 208 3.156293 ACTGATGCATGTTTGTGCCTTA 58.844 40.909 2.46 0.00 44.43 2.69
208 209 1.965643 ACTGATGCATGTTTGTGCCTT 59.034 42.857 2.46 0.00 44.43 4.35
209 210 1.624336 ACTGATGCATGTTTGTGCCT 58.376 45.000 2.46 0.00 44.43 4.75
210 211 2.063266 CAACTGATGCATGTTTGTGCC 58.937 47.619 2.46 0.00 44.43 5.01
211 212 2.063266 CCAACTGATGCATGTTTGTGC 58.937 47.619 2.46 0.00 45.25 4.57
212 213 2.679450 CCCAACTGATGCATGTTTGTG 58.321 47.619 2.46 0.00 0.00 3.33
213 214 1.001181 GCCCAACTGATGCATGTTTGT 59.999 47.619 2.46 0.00 0.00 2.83
214 215 1.001068 TGCCCAACTGATGCATGTTTG 59.999 47.619 2.46 4.19 0.00 2.93
215 216 1.340088 TGCCCAACTGATGCATGTTT 58.660 45.000 2.46 0.00 0.00 2.83
216 217 1.563924 ATGCCCAACTGATGCATGTT 58.436 45.000 2.46 0.00 43.66 2.71
217 218 3.293199 ATGCCCAACTGATGCATGT 57.707 47.368 2.46 0.00 43.66 3.21
219 220 2.082140 ATCATGCCCAACTGATGCAT 57.918 45.000 0.00 0.00 46.09 3.96
220 221 2.732844 TATCATGCCCAACTGATGCA 57.267 45.000 0.00 0.00 39.68 3.96
221 222 3.319972 ACATTATCATGCCCAACTGATGC 59.680 43.478 0.00 0.00 34.14 3.91
222 223 5.068067 TCAACATTATCATGCCCAACTGATG 59.932 40.000 0.00 0.00 34.14 3.07
223 224 5.202765 TCAACATTATCATGCCCAACTGAT 58.797 37.500 0.00 0.00 36.19 2.90
224 225 4.598022 TCAACATTATCATGCCCAACTGA 58.402 39.130 0.00 0.00 33.05 3.41
225 226 4.987408 TCAACATTATCATGCCCAACTG 57.013 40.909 0.00 0.00 33.05 3.16
226 227 5.018809 ACTTCAACATTATCATGCCCAACT 58.981 37.500 0.00 0.00 33.05 3.16
227 228 5.329035 ACTTCAACATTATCATGCCCAAC 57.671 39.130 0.00 0.00 33.05 3.77
228 229 5.392919 CGAACTTCAACATTATCATGCCCAA 60.393 40.000 0.00 0.00 33.05 4.12
229 230 4.096231 CGAACTTCAACATTATCATGCCCA 59.904 41.667 0.00 0.00 33.05 5.36
230 231 4.335315 TCGAACTTCAACATTATCATGCCC 59.665 41.667 0.00 0.00 33.05 5.36
231 232 5.484173 TCGAACTTCAACATTATCATGCC 57.516 39.130 0.00 0.00 33.05 4.40
232 233 6.314018 TGTTCGAACTTCAACATTATCATGC 58.686 36.000 27.32 0.00 33.05 4.06
233 234 8.726650 TTTGTTCGAACTTCAACATTATCATG 57.273 30.769 27.32 0.00 32.60 3.07
234 235 8.567948 ACTTTGTTCGAACTTCAACATTATCAT 58.432 29.630 27.32 0.00 32.60 2.45
235 236 7.925993 ACTTTGTTCGAACTTCAACATTATCA 58.074 30.769 27.32 1.04 32.60 2.15
236 237 9.872757 TTACTTTGTTCGAACTTCAACATTATC 57.127 29.630 27.32 0.00 32.60 1.75
238 239 9.710979 CTTTACTTTGTTCGAACTTCAACATTA 57.289 29.630 27.32 2.47 32.60 1.90
239 240 8.241367 ACTTTACTTTGTTCGAACTTCAACATT 58.759 29.630 27.32 7.71 32.60 2.71
240 241 7.758495 ACTTTACTTTGTTCGAACTTCAACAT 58.242 30.769 27.32 10.20 32.60 2.71
241 242 7.136289 ACTTTACTTTGTTCGAACTTCAACA 57.864 32.000 27.32 5.52 0.00 3.33
242 243 8.170553 TGTACTTTACTTTGTTCGAACTTCAAC 58.829 33.333 27.32 12.42 0.00 3.18
243 244 8.170553 GTGTACTTTACTTTGTTCGAACTTCAA 58.829 33.333 27.32 16.37 0.00 2.69
244 245 7.331440 TGTGTACTTTACTTTGTTCGAACTTCA 59.669 33.333 27.32 10.19 0.00 3.02
245 246 7.678226 TGTGTACTTTACTTTGTTCGAACTTC 58.322 34.615 27.32 3.51 0.00 3.01
246 247 7.599630 TGTGTACTTTACTTTGTTCGAACTT 57.400 32.000 27.32 12.48 0.00 2.66
247 248 7.709613 AGATGTGTACTTTACTTTGTTCGAACT 59.290 33.333 27.32 11.10 0.00 3.01
248 249 7.848491 AGATGTGTACTTTACTTTGTTCGAAC 58.152 34.615 21.42 21.42 0.00 3.95
249 250 8.971321 GTAGATGTGTACTTTACTTTGTTCGAA 58.029 33.333 0.00 0.00 0.00 3.71
250 251 8.355169 AGTAGATGTGTACTTTACTTTGTTCGA 58.645 33.333 0.00 0.00 28.15 3.71
251 252 8.425491 CAGTAGATGTGTACTTTACTTTGTTCG 58.575 37.037 0.00 0.00 30.40 3.95
252 253 9.257651 ACAGTAGATGTGTACTTTACTTTGTTC 57.742 33.333 0.00 0.00 41.91 3.18
254 255 9.909644 CTACAGTAGATGTGTACTTTACTTTGT 57.090 33.333 0.63 0.00 43.80 2.83
255 256 9.909644 ACTACAGTAGATGTGTACTTTACTTTG 57.090 33.333 14.94 0.00 43.80 2.77
262 263 9.856488 CAAACATACTACAGTAGATGTGTACTT 57.144 33.333 14.94 7.84 43.80 2.24
263 264 9.239551 TCAAACATACTACAGTAGATGTGTACT 57.760 33.333 14.94 2.91 43.80 2.73
264 265 9.850628 TTCAAACATACTACAGTAGATGTGTAC 57.149 33.333 14.94 0.00 43.80 2.90
265 266 9.850628 GTTCAAACATACTACAGTAGATGTGTA 57.149 33.333 14.94 6.47 43.80 2.90
266 267 8.585881 AGTTCAAACATACTACAGTAGATGTGT 58.414 33.333 14.94 11.13 43.80 3.72
267 268 8.988064 AGTTCAAACATACTACAGTAGATGTG 57.012 34.615 14.94 11.23 43.80 3.21
268 269 9.998106 AAAGTTCAAACATACTACAGTAGATGT 57.002 29.630 14.94 14.91 46.45 3.06
270 271 9.436957 CCAAAGTTCAAACATACTACAGTAGAT 57.563 33.333 14.94 1.10 33.52 1.98
271 272 7.386848 GCCAAAGTTCAAACATACTACAGTAGA 59.613 37.037 14.94 0.00 33.52 2.59
272 273 7.360946 GGCCAAAGTTCAAACATACTACAGTAG 60.361 40.741 6.00 6.00 33.52 2.57
273 274 6.428771 GGCCAAAGTTCAAACATACTACAGTA 59.571 38.462 0.00 0.00 34.67 2.74
274 275 5.240844 GGCCAAAGTTCAAACATACTACAGT 59.759 40.000 0.00 0.00 0.00 3.55
275 276 5.473504 AGGCCAAAGTTCAAACATACTACAG 59.526 40.000 5.01 0.00 0.00 2.74
276 277 5.381757 AGGCCAAAGTTCAAACATACTACA 58.618 37.500 5.01 0.00 0.00 2.74
277 278 5.959618 AGGCCAAAGTTCAAACATACTAC 57.040 39.130 5.01 0.00 0.00 2.73
278 279 6.239176 CCAAAGGCCAAAGTTCAAACATACTA 60.239 38.462 5.01 0.00 0.00 1.82
339 343 4.742438 TGTTTGTTCAATCTTCCGTAGC 57.258 40.909 0.00 0.00 0.00 3.58
344 348 3.308530 CGCCTTGTTTGTTCAATCTTCC 58.691 45.455 0.00 0.00 0.00 3.46
402 406 3.703052 AGCTGCATTCTTTAAATGGGGAG 59.297 43.478 1.02 0.00 0.00 4.30
408 412 9.632638 TTAGATCCTAAGCTGCATTCTTTAAAT 57.367 29.630 1.02 0.14 0.00 1.40
440 444 8.728833 GTCAGTACTCTAAACTCTAAAGCTACA 58.271 37.037 0.00 0.00 0.00 2.74
441 445 8.728833 TGTCAGTACTCTAAACTCTAAAGCTAC 58.271 37.037 0.00 0.00 0.00 3.58
442 446 8.728833 GTGTCAGTACTCTAAACTCTAAAGCTA 58.271 37.037 0.00 0.00 0.00 3.32
443 447 7.230913 TGTGTCAGTACTCTAAACTCTAAAGCT 59.769 37.037 0.00 0.00 0.00 3.74
448 452 8.622157 GCATATGTGTCAGTACTCTAAACTCTA 58.378 37.037 4.29 0.00 0.00 2.43
449 453 7.122799 TGCATATGTGTCAGTACTCTAAACTCT 59.877 37.037 4.29 0.00 0.00 3.24
450 454 7.258441 TGCATATGTGTCAGTACTCTAAACTC 58.742 38.462 4.29 0.00 0.00 3.01
451 455 7.170393 TGCATATGTGTCAGTACTCTAAACT 57.830 36.000 4.29 0.00 0.00 2.66
452 456 7.464710 GCTTGCATATGTGTCAGTACTCTAAAC 60.465 40.741 4.29 0.00 0.00 2.01
556 562 3.303928 GGGAGGGATACGAGGCGG 61.304 72.222 0.00 0.00 37.60 6.13
582 588 4.818546 AGGCGATCAGTGGAAATAAATGAG 59.181 41.667 0.00 0.00 0.00 2.90
583 589 4.780815 AGGCGATCAGTGGAAATAAATGA 58.219 39.130 0.00 0.00 0.00 2.57
584 590 4.023707 GGAGGCGATCAGTGGAAATAAATG 60.024 45.833 0.00 0.00 0.00 2.32
604 610 2.695147 AGTTTTTGGCAGGAAACAGGAG 59.305 45.455 22.28 0.00 38.03 3.69
637 643 0.312102 GGTCTGCTTGCTTTTCGCTT 59.688 50.000 0.00 0.00 40.11 4.68
641 647 0.670162 TGCTGGTCTGCTTGCTTTTC 59.330 50.000 1.84 0.00 0.00 2.29
669 675 3.631250 TGGAGGGTGATTTAAATGAGCC 58.369 45.455 23.40 23.40 39.95 4.70
683 689 0.405585 CTGATGGTGGTTTGGAGGGT 59.594 55.000 0.00 0.00 0.00 4.34
706 730 2.781646 CGAGTTTGAAAAACACTTCGCC 59.218 45.455 5.72 0.00 0.00 5.54
709 733 4.791676 GTGACCGAGTTTGAAAAACACTTC 59.208 41.667 5.72 0.57 0.00 3.01
717 764 1.137479 AGACCGTGACCGAGTTTGAAA 59.863 47.619 0.00 0.00 35.63 2.69
736 783 2.237143 TGGACTTGCCCACTTCAGATAG 59.763 50.000 0.00 0.00 34.97 2.08
737 784 2.265367 TGGACTTGCCCACTTCAGATA 58.735 47.619 0.00 0.00 34.97 1.98
738 785 1.067295 TGGACTTGCCCACTTCAGAT 58.933 50.000 0.00 0.00 34.97 2.90
739 786 0.843309 TTGGACTTGCCCACTTCAGA 59.157 50.000 0.00 0.00 35.62 3.27
740 787 1.202806 TCTTGGACTTGCCCACTTCAG 60.203 52.381 0.00 0.00 35.62 3.02
741 788 0.843309 TCTTGGACTTGCCCACTTCA 59.157 50.000 0.00 0.00 35.62 3.02
742 789 1.528129 CTCTTGGACTTGCCCACTTC 58.472 55.000 0.00 0.00 35.62 3.01
743 790 0.538287 GCTCTTGGACTTGCCCACTT 60.538 55.000 0.00 0.00 35.62 3.16
744 791 1.073897 GCTCTTGGACTTGCCCACT 59.926 57.895 0.00 0.00 35.62 4.00
745 792 0.823356 TTGCTCTTGGACTTGCCCAC 60.823 55.000 0.00 0.00 35.62 4.61
746 793 0.106268 TTTGCTCTTGGACTTGCCCA 60.106 50.000 0.00 0.00 34.97 5.36
750 797 4.589216 TGGAATTTTGCTCTTGGACTTG 57.411 40.909 0.00 0.00 0.00 3.16
785 832 2.325082 GGTGGCGACGTGATTTGCT 61.325 57.895 0.00 0.00 0.00 3.91
795 842 0.951040 CCTTTCTCTGTGGTGGCGAC 60.951 60.000 0.00 0.00 0.00 5.19
820 867 4.200283 CCGTCTCGGGAGCAGAGC 62.200 72.222 0.00 0.00 44.15 4.09
864 911 5.805486 GGGAGGATTTAAATTTGAAACGCTC 59.195 40.000 1.43 6.86 0.00 5.03
865 912 5.480422 AGGGAGGATTTAAATTTGAAACGCT 59.520 36.000 1.43 4.22 0.00 5.07
897 944 1.534697 GGTGTGGTGGAGGTTTGGA 59.465 57.895 0.00 0.00 0.00 3.53
901 948 4.265056 GGCGGTGTGGTGGAGGTT 62.265 66.667 0.00 0.00 0.00 3.50
903 950 3.567579 AATGGCGGTGTGGTGGAGG 62.568 63.158 0.00 0.00 0.00 4.30
904 951 1.603455 AAATGGCGGTGTGGTGGAG 60.603 57.895 0.00 0.00 0.00 3.86
905 952 1.900981 CAAATGGCGGTGTGGTGGA 60.901 57.895 0.00 0.00 0.00 4.02
906 953 2.650196 CAAATGGCGGTGTGGTGG 59.350 61.111 0.00 0.00 0.00 4.61
907 954 2.141122 GACCAAATGGCGGTGTGGTG 62.141 60.000 9.07 0.00 44.42 4.17
908 955 2.197324 ACCAAATGGCGGTGTGGT 59.803 55.556 0.00 0.00 39.58 4.16
914 961 2.276732 ATCTATGGACCAAATGGCGG 57.723 50.000 0.00 0.00 39.32 6.13
962 1029 2.255881 GGTTGACGGGGGTTTCGTG 61.256 63.158 0.00 0.00 41.22 4.35
992 1065 4.972733 TGGCTGCCATTGGTGCGT 62.973 61.111 19.30 0.00 0.00 5.24
1441 1520 3.823330 GCACCTCCCGACGTCGAT 61.823 66.667 37.65 15.18 43.02 3.59
1551 1635 1.811679 GAAGCCGAGGAAGCGAAGG 60.812 63.158 0.00 0.00 34.64 3.46
1560 1644 5.120674 GGATTTTGAAAATTTGAAGCCGAGG 59.879 40.000 4.46 0.00 0.00 4.63
1617 1701 1.668419 GCACGAATCCTTATGGCACT 58.332 50.000 0.00 0.00 0.00 4.40
1621 1705 0.179056 ACGGGCACGAATCCTTATGG 60.179 55.000 19.19 0.00 44.60 2.74
1858 1946 3.122297 GGAGAGCGACATCAAGAATCAG 58.878 50.000 0.00 0.00 0.00 2.90
1949 2038 0.458669 TTAAGCTCATCGACCCGGTC 59.541 55.000 7.59 7.59 0.00 4.79
2154 2247 1.071385 AGCAGAACTGTTGGTCCTCAG 59.929 52.381 0.00 11.33 37.65 3.35
2240 2334 6.078202 ACTAATGACCATATGACTCACTCG 57.922 41.667 3.65 0.00 0.00 4.18
2248 2342 7.833682 ACATTTCCACAACTAATGACCATATGA 59.166 33.333 3.65 0.00 34.28 2.15
2339 2435 4.116750 AAGGTGATCTTGAGCAGAGTTGC 61.117 47.826 0.00 0.00 41.52 4.17
2413 2509 0.956902 TCCCGATTCTCGACACGTCA 60.957 55.000 0.00 0.00 43.74 4.35
2623 2727 3.244044 GCTCAGTCTGATCTAACCCCATC 60.244 52.174 2.22 0.00 0.00 3.51
2686 2802 1.227089 CAAGATCGTCTGCCTCCCG 60.227 63.158 0.00 0.00 0.00 5.14
2766 2882 2.159099 TGTCGATGATCACTGTAAGGGC 60.159 50.000 0.00 0.00 37.19 5.19
2772 2888 3.439293 GACGAATGTCGATGATCACTGT 58.561 45.455 0.00 0.00 43.74 3.55
2797 2916 9.084164 AGAAAATGTTGCTACTAGTTACATACG 57.916 33.333 0.00 0.00 0.00 3.06
2813 2933 7.412063 TGAGATATTCGCATCAGAAAATGTTG 58.588 34.615 0.00 0.00 33.43 3.33
2828 2948 5.352569 GGGGTATCTGCAAATGAGATATTCG 59.647 44.000 0.00 0.00 35.40 3.34
2936 3058 2.875933 CGGGCTAAACAAAACTCTGTCA 59.124 45.455 0.00 0.00 0.00 3.58
3057 3179 7.335422 AGACGAACATTTTGCTCTCTTATGATT 59.665 33.333 0.00 0.00 0.00 2.57
3074 3196 1.207329 GGAGGGTAAGCAGACGAACAT 59.793 52.381 0.00 0.00 0.00 2.71
3094 3216 0.174389 AGCATCGCCTACAGTGACAG 59.826 55.000 0.00 0.00 37.96 3.51
3159 3281 5.459110 TCGGTTAGAACATGCGTATTTTC 57.541 39.130 4.42 4.42 0.00 2.29
3170 3295 6.708502 TCAGTTCATCAAAATCGGTTAGAACA 59.291 34.615 0.00 0.00 37.25 3.18
3203 3328 0.531974 AGCGCAAGGACGAGTTTTCA 60.532 50.000 11.47 0.00 38.28 2.69
3226 3351 4.864334 CCGGGCATGACCAGCTCC 62.864 72.222 20.22 0.00 42.05 4.70
3241 3366 1.086696 CCTGGACAAGTACATTGCCG 58.913 55.000 0.00 1.52 43.15 5.69
3247 3372 4.497291 ACTGTTTTCCTGGACAAGTACA 57.503 40.909 0.00 0.00 0.00 2.90
3250 3375 4.881850 CAGTAACTGTTTTCCTGGACAAGT 59.118 41.667 0.00 0.00 0.00 3.16
3253 3378 4.080807 TGACAGTAACTGTTTTCCTGGACA 60.081 41.667 14.74 12.07 45.44 4.02
3286 3411 1.649664 CACTCTCTTCATCCTTGGCG 58.350 55.000 0.00 0.00 0.00 5.69
3298 3423 2.601666 TGACTGGCGCCACTCTCT 60.602 61.111 29.03 5.15 0.00 3.10
3304 3429 3.385384 CTCTCCTGACTGGCGCCA 61.385 66.667 30.59 30.59 35.26 5.69
3313 3438 1.366082 TCCCCTCCAAATCTCTCCTGA 59.634 52.381 0.00 0.00 0.00 3.86
3326 3451 2.760385 CTCCGACCACTCCCCTCC 60.760 72.222 0.00 0.00 0.00 4.30
3343 3468 3.661944 CCATCAGTGAGATATGCTGTCC 58.338 50.000 0.00 0.00 34.43 4.02
3402 3527 7.224297 ACGGACGAGTAATAAATACCTACCTA 58.776 38.462 0.00 0.00 34.89 3.08
3404 3529 6.319141 ACGGACGAGTAATAAATACCTACC 57.681 41.667 0.00 0.00 34.89 3.18
3410 3540 7.218773 CACGAAAGAACGGACGAGTAATAAATA 59.781 37.037 0.00 0.00 37.61 1.40
3411 3541 6.034256 CACGAAAGAACGGACGAGTAATAAAT 59.966 38.462 0.00 0.00 37.61 1.40
3413 3543 4.853196 CACGAAAGAACGGACGAGTAATAA 59.147 41.667 0.00 0.00 37.61 1.40
3415 3545 3.240069 CACGAAAGAACGGACGAGTAAT 58.760 45.455 0.00 0.00 37.61 1.89
3418 3548 0.938168 GCACGAAAGAACGGACGAGT 60.938 55.000 0.00 0.00 37.61 4.18
3423 3553 0.602638 ATGCTGCACGAAAGAACGGA 60.603 50.000 3.57 0.00 37.61 4.69
3425 3555 0.512518 TGATGCTGCACGAAAGAACG 59.487 50.000 3.57 0.00 39.31 3.95
3433 3563 0.453282 CGGTTTTCTGATGCTGCACG 60.453 55.000 3.57 0.00 0.00 5.34
3434 3564 0.109597 CCGGTTTTCTGATGCTGCAC 60.110 55.000 3.57 0.00 0.00 4.57
3435 3565 1.865788 GCCGGTTTTCTGATGCTGCA 61.866 55.000 4.13 4.13 0.00 4.41
3436 3566 1.153958 GCCGGTTTTCTGATGCTGC 60.154 57.895 1.90 0.00 0.00 5.25
3437 3567 0.169672 CAGCCGGTTTTCTGATGCTG 59.830 55.000 1.90 0.00 40.05 4.41
3438 3568 1.589716 GCAGCCGGTTTTCTGATGCT 61.590 55.000 10.61 0.00 36.48 3.79
3439 3569 1.153958 GCAGCCGGTTTTCTGATGC 60.154 57.895 10.61 0.00 33.83 3.91
3440 3570 1.508088 GGCAGCCGGTTTTCTGATG 59.492 57.895 10.61 0.00 32.26 3.07
3441 3571 2.040544 CGGCAGCCGGTTTTCTGAT 61.041 57.895 27.32 0.00 44.15 2.90
3442 3572 2.668212 CGGCAGCCGGTTTTCTGA 60.668 61.111 27.32 0.00 44.15 3.27
3452 3582 1.741770 CTGGTTGTAGACGGCAGCC 60.742 63.158 0.00 0.00 37.67 4.85
3453 3583 1.741770 CCTGGTTGTAGACGGCAGC 60.742 63.158 0.00 0.00 0.00 5.25
3454 3584 0.537188 ATCCTGGTTGTAGACGGCAG 59.463 55.000 0.00 0.00 0.00 4.85
3455 3585 0.249120 CATCCTGGTTGTAGACGGCA 59.751 55.000 0.00 0.00 0.00 5.69
3456 3586 0.462047 CCATCCTGGTTGTAGACGGC 60.462 60.000 4.19 0.00 31.35 5.68
3457 3587 0.462047 GCCATCCTGGTTGTAGACGG 60.462 60.000 4.19 0.00 40.46 4.79
3458 3588 0.249120 TGCCATCCTGGTTGTAGACG 59.751 55.000 4.19 0.00 40.46 4.18
3459 3589 1.407437 CCTGCCATCCTGGTTGTAGAC 60.407 57.143 4.19 0.00 40.46 2.59
3460 3590 0.911769 CCTGCCATCCTGGTTGTAGA 59.088 55.000 4.19 0.00 40.46 2.59
3461 3591 0.911769 TCCTGCCATCCTGGTTGTAG 59.088 55.000 4.19 2.60 40.46 2.74
3462 3592 1.004277 GTTCCTGCCATCCTGGTTGTA 59.996 52.381 4.19 0.00 40.46 2.41
3463 3593 0.251341 GTTCCTGCCATCCTGGTTGT 60.251 55.000 4.19 0.00 40.46 3.32
3464 3594 0.251297 TGTTCCTGCCATCCTGGTTG 60.251 55.000 0.00 0.00 40.46 3.77
3465 3595 0.251341 GTGTTCCTGCCATCCTGGTT 60.251 55.000 0.00 0.00 40.46 3.67
3466 3596 1.136329 AGTGTTCCTGCCATCCTGGT 61.136 55.000 0.00 0.00 40.46 4.00
3467 3597 0.038744 AAGTGTTCCTGCCATCCTGG 59.961 55.000 0.00 0.00 41.55 4.45
3468 3598 1.271543 TGAAGTGTTCCTGCCATCCTG 60.272 52.381 0.00 0.00 0.00 3.86
3469 3599 1.067295 TGAAGTGTTCCTGCCATCCT 58.933 50.000 0.00 0.00 0.00 3.24
3470 3600 1.909700 TTGAAGTGTTCCTGCCATCC 58.090 50.000 0.00 0.00 0.00 3.51
3471 3601 3.128242 CAGATTGAAGTGTTCCTGCCATC 59.872 47.826 0.00 0.00 0.00 3.51
3472 3602 3.087031 CAGATTGAAGTGTTCCTGCCAT 58.913 45.455 0.00 0.00 0.00 4.40
3473 3603 2.158623 ACAGATTGAAGTGTTCCTGCCA 60.159 45.455 0.00 0.00 0.00 4.92
3474 3604 2.508526 ACAGATTGAAGTGTTCCTGCC 58.491 47.619 0.00 0.00 0.00 4.85
3475 3605 3.854784 GCAACAGATTGAAGTGTTCCTGC 60.855 47.826 0.00 0.00 38.15 4.85
3476 3606 3.304928 GGCAACAGATTGAAGTGTTCCTG 60.305 47.826 0.00 0.00 38.15 3.86
3477 3607 2.887152 GGCAACAGATTGAAGTGTTCCT 59.113 45.455 0.00 0.00 38.15 3.36
3478 3608 2.622942 TGGCAACAGATTGAAGTGTTCC 59.377 45.455 0.00 0.87 46.17 3.62
3479 3609 3.988379 TGGCAACAGATTGAAGTGTTC 57.012 42.857 0.00 0.00 46.17 3.18
3502 3632 1.134371 GCAGCCGGTTCTCCTTAGAAT 60.134 52.381 1.90 0.00 43.50 2.40
3503 3633 0.249398 GCAGCCGGTTCTCCTTAGAA 59.751 55.000 1.90 0.00 39.47 2.10
3504 3634 1.614241 GGCAGCCGGTTCTCCTTAGA 61.614 60.000 1.90 0.00 0.00 2.10
3505 3635 1.153349 GGCAGCCGGTTCTCCTTAG 60.153 63.158 1.90 0.00 0.00 2.18
3517 3648 1.741770 CTGGTTGTAGACGGCAGCC 60.742 63.158 0.00 0.00 37.67 4.85
3518 3649 1.741770 CCTGGTTGTAGACGGCAGC 60.742 63.158 0.00 0.00 0.00 5.25
3522 3653 3.760693 CCATCCTGGTTGTAGACGG 57.239 57.895 4.19 0.00 31.35 4.79
3580 3711 6.932400 TGTTACTGTTTTTGATACGGACATCT 59.068 34.615 0.00 0.00 0.00 2.90
3597 3745 0.553819 TGGCCCAAACCTGTTACTGT 59.446 50.000 0.00 0.00 0.00 3.55
3605 3753 0.190815 AACAATCCTGGCCCAAACCT 59.809 50.000 0.00 0.00 0.00 3.50
3621 3769 9.094578 TGGATTATACAAGAAAATCCCAAAACA 57.905 29.630 10.06 0.00 45.37 2.83
3654 3802 4.206477 TCTGATGATATACCGGGCATTG 57.794 45.455 6.32 0.00 0.00 2.82
3655 3803 4.287067 AGTTCTGATGATATACCGGGCATT 59.713 41.667 6.32 0.00 0.00 3.56
3659 3807 5.047021 ACATCAGTTCTGATGATATACCGGG 60.047 44.000 34.68 15.02 46.25 5.73
3663 3811 9.764363 TGGTAAACATCAGTTCTGATGATATAC 57.236 33.333 34.68 29.37 46.25 1.47
3665 3813 9.857656 AATGGTAAACATCAGTTCTGATGATAT 57.142 29.630 34.68 24.77 46.25 1.63
3666 3814 9.112725 CAATGGTAAACATCAGTTCTGATGATA 57.887 33.333 34.68 25.98 46.25 2.15
3667 3815 7.830697 TCAATGGTAAACATCAGTTCTGATGAT 59.169 33.333 34.68 25.93 46.25 2.45
3668 3816 7.167535 TCAATGGTAAACATCAGTTCTGATGA 58.832 34.615 34.68 19.72 46.25 2.92
3670 3818 7.415989 GCATCAATGGTAAACATCAGTTCTGAT 60.416 37.037 9.22 9.22 39.40 2.90
3671 3819 6.127925 GCATCAATGGTAAACATCAGTTCTGA 60.128 38.462 4.96 4.96 39.40 3.27
3672 3820 6.032094 GCATCAATGGTAAACATCAGTTCTG 58.968 40.000 0.00 0.00 39.40 3.02
3673 3821 5.711506 TGCATCAATGGTAAACATCAGTTCT 59.288 36.000 0.00 0.00 39.40 3.01
3674 3822 5.953183 TGCATCAATGGTAAACATCAGTTC 58.047 37.500 0.00 0.00 39.40 3.01
3675 3823 5.981088 TGCATCAATGGTAAACATCAGTT 57.019 34.783 0.00 0.00 39.40 3.16
3676 3824 7.503230 TGATATGCATCAATGGTAAACATCAGT 59.497 33.333 0.19 0.00 39.40 3.41
3677 3825 7.806487 GTGATATGCATCAATGGTAAACATCAG 59.194 37.037 0.19 0.00 42.79 2.90
3678 3826 7.255555 GGTGATATGCATCAATGGTAAACATCA 60.256 37.037 0.19 0.00 42.79 3.07
3679 3827 7.086376 GGTGATATGCATCAATGGTAAACATC 58.914 38.462 0.19 0.00 42.79 3.06
3680 3828 6.294120 CGGTGATATGCATCAATGGTAAACAT 60.294 38.462 0.19 0.00 42.79 2.71
3681 3829 5.008514 CGGTGATATGCATCAATGGTAAACA 59.991 40.000 0.19 0.00 42.79 2.83
3682 3830 5.451908 CGGTGATATGCATCAATGGTAAAC 58.548 41.667 0.19 0.00 42.79 2.01
3683 3831 4.518590 CCGGTGATATGCATCAATGGTAAA 59.481 41.667 0.19 0.00 42.79 2.01
3684 3832 4.071423 CCGGTGATATGCATCAATGGTAA 58.929 43.478 0.19 0.00 42.79 2.85
3685 3833 3.326297 TCCGGTGATATGCATCAATGGTA 59.674 43.478 0.19 0.00 42.79 3.25
3686 3834 2.106338 TCCGGTGATATGCATCAATGGT 59.894 45.455 0.19 0.00 42.79 3.55
3687 3835 2.781923 TCCGGTGATATGCATCAATGG 58.218 47.619 0.19 2.55 42.79 3.16
3688 3836 3.817084 AGTTCCGGTGATATGCATCAATG 59.183 43.478 0.19 0.00 42.79 2.82
3689 3837 3.817084 CAGTTCCGGTGATATGCATCAAT 59.183 43.478 0.19 0.00 42.79 2.57
3690 3838 3.118445 TCAGTTCCGGTGATATGCATCAA 60.118 43.478 0.19 0.00 42.79 2.57
3691 3839 2.433970 TCAGTTCCGGTGATATGCATCA 59.566 45.455 0.19 0.00 38.90 3.07
3692 3840 3.111853 TCAGTTCCGGTGATATGCATC 57.888 47.619 0.19 0.00 0.00 3.91
3693 3841 3.181451 ACATCAGTTCCGGTGATATGCAT 60.181 43.478 3.79 3.79 32.69 3.96
3694 3842 2.170397 ACATCAGTTCCGGTGATATGCA 59.830 45.455 0.00 0.00 32.69 3.96
3695 3843 2.838736 ACATCAGTTCCGGTGATATGC 58.161 47.619 0.00 0.00 32.69 3.14
3729 3877 6.675244 GCTGAAATGTTGTTTCCCTTTTGTTG 60.675 38.462 0.00 0.00 0.00 3.33
3730 3878 5.353956 GCTGAAATGTTGTTTCCCTTTTGTT 59.646 36.000 0.00 0.00 0.00 2.83
3731 3879 4.875536 GCTGAAATGTTGTTTCCCTTTTGT 59.124 37.500 0.00 0.00 0.00 2.83
3732 3880 4.874966 TGCTGAAATGTTGTTTCCCTTTTG 59.125 37.500 0.00 0.00 0.00 2.44
3733 3881 4.875536 GTGCTGAAATGTTGTTTCCCTTTT 59.124 37.500 0.00 0.00 0.00 2.27
3734 3882 4.162131 AGTGCTGAAATGTTGTTTCCCTTT 59.838 37.500 0.00 0.00 0.00 3.11
3735 3883 3.706086 AGTGCTGAAATGTTGTTTCCCTT 59.294 39.130 0.00 0.00 0.00 3.95
3736 3884 3.299503 AGTGCTGAAATGTTGTTTCCCT 58.700 40.909 0.00 0.00 0.00 4.20
3737 3885 3.552890 GGAGTGCTGAAATGTTGTTTCCC 60.553 47.826 0.00 0.00 0.00 3.97
3738 3886 3.319122 AGGAGTGCTGAAATGTTGTTTCC 59.681 43.478 0.00 0.00 0.00 3.13
3739 3887 4.540824 GAGGAGTGCTGAAATGTTGTTTC 58.459 43.478 0.00 0.00 0.00 2.78
3740 3888 3.319122 GGAGGAGTGCTGAAATGTTGTTT 59.681 43.478 0.00 0.00 0.00 2.83
3741 3889 2.887152 GGAGGAGTGCTGAAATGTTGTT 59.113 45.455 0.00 0.00 0.00 2.83
3742 3890 2.508526 GGAGGAGTGCTGAAATGTTGT 58.491 47.619 0.00 0.00 0.00 3.32
3743 3891 1.466167 CGGAGGAGTGCTGAAATGTTG 59.534 52.381 0.00 0.00 0.00 3.33
3744 3892 1.347707 TCGGAGGAGTGCTGAAATGTT 59.652 47.619 0.00 0.00 0.00 2.71
3745 3893 0.976641 TCGGAGGAGTGCTGAAATGT 59.023 50.000 0.00 0.00 0.00 2.71
3746 3894 2.322355 ATCGGAGGAGTGCTGAAATG 57.678 50.000 0.00 0.00 0.00 2.32
3747 3895 2.224161 GCTATCGGAGGAGTGCTGAAAT 60.224 50.000 0.00 0.00 0.00 2.17
3748 3896 1.137086 GCTATCGGAGGAGTGCTGAAA 59.863 52.381 0.00 0.00 0.00 2.69
3749 3897 0.747255 GCTATCGGAGGAGTGCTGAA 59.253 55.000 0.00 0.00 0.00 3.02
3750 3898 0.106469 AGCTATCGGAGGAGTGCTGA 60.106 55.000 0.00 0.00 34.69 4.26
3751 3899 0.313672 GAGCTATCGGAGGAGTGCTG 59.686 60.000 0.00 0.00 35.65 4.41
3752 3900 0.825840 GGAGCTATCGGAGGAGTGCT 60.826 60.000 0.00 0.00 37.37 4.40
3753 3901 1.663173 GGAGCTATCGGAGGAGTGC 59.337 63.158 0.00 0.00 0.00 4.40
3754 3902 0.468214 TGGGAGCTATCGGAGGAGTG 60.468 60.000 0.00 0.00 0.00 3.51
3755 3903 0.261991 TTGGGAGCTATCGGAGGAGT 59.738 55.000 0.00 0.00 0.00 3.85
3845 4043 3.941483 CCCAGATTGATGGTGACTGTTAC 59.059 47.826 0.00 0.00 38.81 2.50
3846 4044 3.587061 ACCCAGATTGATGGTGACTGTTA 59.413 43.478 0.00 0.00 38.81 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.