Multiple sequence alignment - TraesCS6A01G148500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G148500 chr6A 100.000 8606 0 0 683 9288 129738031 129746636 0.000000e+00 15893
1 TraesCS6A01G148500 chr6A 100.000 299 0 0 1 299 129737349 129737647 3.790000e-153 553
2 TraesCS6A01G148500 chr6B 95.262 8147 257 44 683 8757 193467148 193475237 0.000000e+00 12787
3 TraesCS6A01G148500 chr6B 93.046 302 16 2 1 299 193466824 193467123 3.980000e-118 436
4 TraesCS6A01G148500 chr6B 92.593 270 20 0 5995 6264 19354196 19354465 1.130000e-103 388
5 TraesCS6A01G148500 chr6B 92.222 270 21 0 5995 6264 101938256 101937987 5.260000e-102 383
6 TraesCS6A01G148500 chr6D 96.698 4664 131 13 683 5327 106424001 106428660 0.000000e+00 7738
7 TraesCS6A01G148500 chr6D 94.987 3531 80 32 5288 8793 106428652 106432110 0.000000e+00 5450
8 TraesCS6A01G148500 chr6D 92.308 299 21 2 1 299 106423680 106423976 3.100000e-114 424
9 TraesCS6A01G148500 chr6D 96.825 63 2 0 8869 8931 106432262 106432324 1.280000e-18 106
10 TraesCS6A01G148500 chr1B 81.145 1607 219 59 2572 4124 348804838 348803262 0.000000e+00 1212
11 TraesCS6A01G148500 chr1B 84.468 1249 144 29 6346 7567 348798623 348797398 0.000000e+00 1186
12 TraesCS6A01G148500 chr1B 81.925 769 101 18 998 1759 348806432 348805695 4.770000e-172 616
13 TraesCS6A01G148500 chr1B 80.372 698 111 22 7603 8288 348797328 348796645 2.990000e-139 507
14 TraesCS6A01G148500 chr1B 83.577 548 58 20 5451 5973 348799662 348799122 1.400000e-132 484
15 TraesCS6A01G148500 chr1B 92.593 270 20 0 5995 6264 639062469 639062738 1.130000e-103 388
16 TraesCS6A01G148500 chr1B 87.379 309 34 4 4809 5113 348800146 348799839 5.340000e-92 350
17 TraesCS6A01G148500 chr1D 80.248 1696 247 64 2602 4235 262711863 262710194 0.000000e+00 1195
18 TraesCS6A01G148500 chr1D 84.177 1245 155 24 6346 7567 262708375 262707150 0.000000e+00 1170
19 TraesCS6A01G148500 chr1D 78.788 1155 187 31 998 2126 262715361 262714239 0.000000e+00 723
20 TraesCS6A01G148500 chr1D 82.645 605 70 25 5451 6026 262709319 262708721 3.870000e-138 503
21 TraesCS6A01G148500 chr1D 80.114 699 111 18 7603 8288 262707080 262706397 6.480000e-136 496
22 TraesCS6A01G148500 chr1D 81.667 480 67 16 4649 5113 262709966 262709493 6.810000e-101 379
23 TraesCS6A01G148500 chr1D 92.308 208 12 4 8932 9138 254453789 254453585 9.120000e-75 292
24 TraesCS6A01G148500 chr1A 86.351 1121 104 27 6454 7548 337010183 337009086 0.000000e+00 1177
25 TraesCS6A01G148500 chr1A 84.748 872 99 28 3279 4124 337013240 337012377 0.000000e+00 843
26 TraesCS6A01G148500 chr1A 83.464 768 110 14 1000 1759 337016402 337015644 0.000000e+00 699
27 TraesCS6A01G148500 chr1A 80.429 700 107 20 7603 8288 337008996 337008313 2.990000e-139 507
28 TraesCS6A01G148500 chr1A 82.160 611 70 26 5447 6026 337011400 337010798 1.080000e-133 488
29 TraesCS6A01G148500 chr1A 87.702 309 33 4 4809 5113 337011874 337011567 1.150000e-93 355
30 TraesCS6A01G148500 chr2B 93.333 270 17 1 5995 6264 179157147 179157415 1.880000e-106 398
31 TraesCS6A01G148500 chr3B 92.222 270 21 0 5995 6264 42572567 42572298 5.260000e-102 383
32 TraesCS6A01G148500 chr3B 90.000 270 27 0 5995 6264 789534949 789534680 5.340000e-92 350
33 TraesCS6A01G148500 chrUn 92.754 207 12 3 8932 9138 453035891 453036094 7.050000e-76 296
34 TraesCS6A01G148500 chrUn 92.271 207 12 4 8932 9138 53260551 53260753 3.280000e-74 291
35 TraesCS6A01G148500 chrUn 91.827 208 13 4 8932 9138 388894088 388893884 4.240000e-73 287
36 TraesCS6A01G148500 chrUn 91.827 208 12 5 8932 9138 385510592 385510795 1.530000e-72 285
37 TraesCS6A01G148500 chrUn 91.346 208 14 4 8932 9138 261570743 261570947 1.970000e-71 281
38 TraesCS6A01G148500 chr5D 92.754 207 12 3 8932 9138 481592112 481591909 7.050000e-76 296
39 TraesCS6A01G148500 chr5D 91.304 207 13 5 8932 9138 329128910 329129111 2.550000e-70 278
40 TraesCS6A01G148500 chr7B 91.827 208 13 4 8932 9138 137683392 137683188 4.240000e-73 287


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G148500 chr6A 129737349 129746636 9287 False 8223.000000 15893 100.000000 1 9288 2 chr6A.!!$F1 9287
1 TraesCS6A01G148500 chr6B 193466824 193475237 8413 False 6611.500000 12787 94.154000 1 8757 2 chr6B.!!$F2 8756
2 TraesCS6A01G148500 chr6D 106423680 106432324 8644 False 3429.500000 7738 95.204500 1 8931 4 chr6D.!!$F1 8930
3 TraesCS6A01G148500 chr1B 348796645 348806432 9787 True 725.833333 1212 83.144333 998 8288 6 chr1B.!!$R1 7290
4 TraesCS6A01G148500 chr1D 262706397 262715361 8964 True 744.333333 1195 81.273167 998 8288 6 chr1D.!!$R2 7290
5 TraesCS6A01G148500 chr1A 337008313 337016402 8089 True 678.166667 1177 84.142333 1000 8288 6 chr1A.!!$R1 7288

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.175760 CGAGATTCCTTTCCAGCCGA 59.824 55.000 0.00 0.00 0.0 5.54 F
146 150 0.809385 CGTCCAGGCGAGTTCTTCTA 59.191 55.000 0.00 0.00 0.0 2.10 F
823 829 2.058675 CGGGAGTCTGGGAACTGTT 58.941 57.895 0.00 0.00 0.0 3.16 F
2385 4524 1.364171 GTCTCGCGTCCCATGCTAT 59.636 57.895 5.77 0.00 0.0 2.97 F
3847 6890 0.846427 AGCTGAAGATTGGGTGGGGA 60.846 55.000 0.00 0.00 0.0 4.81 F
4006 7059 1.986378 TGCACGTTTTTGGTGTTTTCG 59.014 42.857 0.00 0.00 37.7 3.46 F
4130 7187 2.689983 AGAGCTGGTTGGTGACTTTTTG 59.310 45.455 0.00 0.00 0.0 2.44 F
5584 11349 0.035820 GGAAGGTAATGGTGACGGCA 60.036 55.000 0.00 0.00 0.0 5.69 F
5858 11641 1.237285 AAGTGGAGCGCACATTGACC 61.237 55.000 11.47 1.58 0.0 4.02 F
7562 13687 1.538135 GGTACACCCACACCCCTCT 60.538 63.158 0.00 0.00 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1599 1617 3.940209 TTAAAACTGCTCATGCTTGGG 57.060 42.857 0.00 0.00 40.48 4.12 R
2142 2206 6.792326 AGTACAATCAGCATCATTGACATTG 58.208 36.000 8.74 0.00 35.54 2.82 R
2431 4570 1.809133 TTTATCCTACCATCGGGCCA 58.191 50.000 4.39 0.00 37.90 5.36 R
3895 6938 3.181493 CCTTGTTTCTGATAGCCATGTGC 60.181 47.826 0.00 0.00 41.71 4.57 R
4744 10451 2.225019 GCCAACATCCTTATCGATGCAG 59.775 50.000 8.54 3.77 42.91 4.41 R
5575 11340 2.331451 GCACTGTTTGCCGTCACC 59.669 61.111 0.00 0.00 46.63 4.02 R
5858 11641 4.084589 TCAAATTCATCACGTTGTGTCTCG 60.085 41.667 0.00 0.00 34.79 4.04 R
7203 13316 0.596083 CATCTCCAAGCCTACGAGCG 60.596 60.000 0.00 0.00 38.01 5.03 R
7734 13899 1.743252 GCTGGCAACCTTCCTCTCG 60.743 63.158 0.00 0.00 0.00 4.04 R
9207 15472 0.037046 CTTCAAGGGCCCAAATGCAC 60.037 55.000 27.56 0.00 33.81 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.140407 CGGTCGCCAAATCGTCTCTC 61.140 60.000 0.00 0.00 0.00 3.20
74 75 0.175760 CGAGATTCCTTTCCAGCCGA 59.824 55.000 0.00 0.00 0.00 5.54
140 144 1.668101 GAGATCCGTCCAGGCGAGTT 61.668 60.000 4.99 0.00 40.77 3.01
146 150 0.809385 CGTCCAGGCGAGTTCTTCTA 59.191 55.000 0.00 0.00 0.00 2.10
249 253 6.591935 TGCATACCCTTATTACTTTCTGAGG 58.408 40.000 0.00 0.00 0.00 3.86
261 265 3.055819 ACTTTCTGAGGCGCTTGAATCTA 60.056 43.478 7.64 0.00 0.00 1.98
262 266 2.586258 TCTGAGGCGCTTGAATCTAC 57.414 50.000 7.64 0.00 0.00 2.59
275 279 2.429610 TGAATCTACCCAGTTAGCCGTC 59.570 50.000 0.00 0.00 0.00 4.79
287 291 2.287457 TAGCCGTCGATTTGACCCGG 62.287 60.000 0.00 0.00 45.23 5.73
823 829 2.058675 CGGGAGTCTGGGAACTGTT 58.941 57.895 0.00 0.00 0.00 3.16
1104 1116 8.617290 TTTAAACCTTTCCTGAGATACTTCAC 57.383 34.615 0.00 0.00 0.00 3.18
1140 1152 6.605849 CACACACTTTTGGTTCATATCTGAG 58.394 40.000 0.00 0.00 31.68 3.35
1423 1438 3.290710 TCCAATTAATCAAGAGGCTGCC 58.709 45.455 11.65 11.65 0.00 4.85
1599 1617 2.363683 CCAGAAATGGGACTTCAGAGC 58.636 52.381 0.00 0.00 0.00 4.09
1952 2003 9.079833 TGCTTTGTTTATAGTACACGAGTAATC 57.920 33.333 0.00 0.00 30.21 1.75
2142 2206 4.562789 GTGTCAGGCTTTTGTGAAGTTTTC 59.437 41.667 0.00 0.00 0.00 2.29
2169 2233 6.877236 TGTCAATGATGCTGATTGTACTCTA 58.123 36.000 0.00 0.00 33.33 2.43
2203 2267 4.751767 ACCAACTTCCAAAATTCAAGCA 57.248 36.364 0.00 0.00 0.00 3.91
2328 4467 7.386025 ACGTGGAAAAATGTAGGTACTCTTAAC 59.614 37.037 0.00 0.00 41.75 2.01
2385 4524 1.364171 GTCTCGCGTCCCATGCTAT 59.636 57.895 5.77 0.00 0.00 2.97
2431 4570 5.127682 GGTTTCCACTAAATCATTGAGGCAT 59.872 40.000 0.00 0.00 0.00 4.40
2599 4739 7.885399 AGTTTCAGTAGTTCAATAAGAATGCCT 59.115 33.333 0.00 0.00 38.76 4.75
2625 4765 7.987458 TGAAATAGCCCTGTAGAGAGTAAATTG 59.013 37.037 0.00 0.00 0.00 2.32
2826 4972 1.944709 ACCGGAGAAAAAGGTTTGTCG 59.055 47.619 9.46 0.00 37.78 4.35
2872 5019 5.106277 CGTCTGTAGTCAGTATGGTTCTTCA 60.106 44.000 0.00 0.00 41.91 3.02
2898 5049 2.240667 AGCATTACCTTGACCTGCAGAT 59.759 45.455 17.39 0.00 35.32 2.90
3433 6465 3.034635 TGGCAATCTCTCTCCTAAGGTC 58.965 50.000 0.00 0.00 0.00 3.85
3782 6824 8.053963 TGAAGTACTACTAGTATTCCTGCTTCT 58.946 37.037 18.17 0.48 32.30 2.85
3847 6890 0.846427 AGCTGAAGATTGGGTGGGGA 60.846 55.000 0.00 0.00 0.00 4.81
3895 6938 2.767496 CCTGCTCCTCCTCCAGGG 60.767 72.222 0.00 0.00 43.67 4.45
3904 6947 3.736224 CCTCCAGGGCACATGGCT 61.736 66.667 5.33 0.00 44.01 4.75
3983 7036 5.652994 TTTTTGTGGAAGTTGCAAGTAGT 57.347 34.783 7.33 0.00 0.00 2.73
4006 7059 1.986378 TGCACGTTTTTGGTGTTTTCG 59.014 42.857 0.00 0.00 37.70 3.46
4023 7079 5.514559 TGTTTTCGTGTTGTTGATGACATTG 59.485 36.000 0.00 0.00 38.26 2.82
4130 7187 2.689983 AGAGCTGGTTGGTGACTTTTTG 59.310 45.455 0.00 0.00 0.00 2.44
4185 7245 3.075732 TGGCCTTAATATCCATGCCATCA 59.924 43.478 3.32 0.00 43.49 3.07
4549 7714 4.703379 ATGCCCTGGTCAAATTCAAAAA 57.297 36.364 0.00 0.00 0.00 1.94
4595 7769 3.505680 TGGAACCATTCATGAGAAAACCG 59.494 43.478 0.00 0.00 37.29 4.44
4682 10389 3.005791 ACCTTTTACCAGCACTGAATTGC 59.994 43.478 0.00 0.00 43.34 3.56
4712 10419 3.251479 TGCCAGCTATGTTCTGTAGTG 57.749 47.619 0.00 0.00 0.00 2.74
4717 10424 5.482908 CCAGCTATGTTCTGTAGTGTTTCT 58.517 41.667 0.00 0.00 0.00 2.52
4819 10542 4.505191 CACTTTGCTGACTCATTTGGTTTG 59.495 41.667 0.00 0.00 0.00 2.93
5056 10779 5.022282 TCATTCGCTCAGGTATCAATTGA 57.978 39.130 11.26 11.26 0.00 2.57
5146 10872 6.127758 TGTCCATTCAATCTCCGTTATTTTGG 60.128 38.462 0.00 0.00 0.00 3.28
5273 11007 6.106673 TGCAAAGAGAGTACCTAGTAATTGC 58.893 40.000 0.00 0.00 39.72 3.56
5407 11170 8.896722 ATATAAGACCGTTATAGGAACCAGAT 57.103 34.615 0.00 0.00 34.73 2.90
5575 11340 6.414732 TGATTACAGGAAGTGGAAGGTAATG 58.585 40.000 0.00 0.00 30.12 1.90
5579 11344 3.009033 CAGGAAGTGGAAGGTAATGGTGA 59.991 47.826 0.00 0.00 0.00 4.02
5580 11345 3.009143 AGGAAGTGGAAGGTAATGGTGAC 59.991 47.826 0.00 0.00 0.00 3.67
5584 11349 0.035820 GGAAGGTAATGGTGACGGCA 60.036 55.000 0.00 0.00 0.00 5.69
5772 11543 5.200483 TGGACCTTGTCAGATGTTCTTTTT 58.800 37.500 0.00 0.00 33.68 1.94
5858 11641 1.237285 AAGTGGAGCGCACATTGACC 61.237 55.000 11.47 1.58 0.00 4.02
6087 11970 6.969366 TGTTTTGATTGATTTGATCTCACGT 58.031 32.000 0.00 0.00 0.00 4.49
6134 12042 3.386768 TTACTTGTGACCACTCTGAGC 57.613 47.619 4.19 0.00 0.00 4.26
6477 12577 4.038763 TGTGTAGATTGTCGAGGTTCTTGT 59.961 41.667 0.00 0.00 0.00 3.16
6577 12677 3.243907 ACAGTAGTGCTCCTGTGAAGAAC 60.244 47.826 0.00 0.00 40.30 3.01
6605 12705 3.629855 TGCATTTCGAACCAAGTTTGAGA 59.370 39.130 0.00 0.00 37.27 3.27
6706 12807 4.626042 AGGTAATGCTGCTAGATTTCTCG 58.374 43.478 0.00 0.00 0.00 4.04
6707 12808 4.342378 AGGTAATGCTGCTAGATTTCTCGA 59.658 41.667 0.00 0.00 0.00 4.04
7203 13316 4.216472 GGAAGAGAGGATGTTGGTTTGAAC 59.784 45.833 0.00 0.00 0.00 3.18
7309 13431 3.806316 GCTCTAGAGAGTGCGTATCTC 57.194 52.381 24.24 4.86 43.85 2.75
7317 13439 1.751924 GAGTGCGTATCTCCTGAACCT 59.248 52.381 0.00 0.00 0.00 3.50
7530 13655 6.704289 ATTCACCATCCAGATACAATTGTG 57.296 37.500 21.42 3.91 0.00 3.33
7555 13680 2.247699 AGAGCATAGGTACACCCACA 57.752 50.000 0.00 0.00 36.42 4.17
7562 13687 1.538135 GGTACACCCACACCCCTCT 60.538 63.158 0.00 0.00 0.00 3.69
7701 13866 7.272037 TGTAATGCAGTATCGTGAATCTCTA 57.728 36.000 0.00 0.00 0.00 2.43
7734 13899 3.072944 GTTGCATAGCATGGAGGAGATC 58.927 50.000 0.00 0.00 38.76 2.75
7776 13941 1.291132 GTAGGCGCCTTCAATCAGAC 58.709 55.000 37.74 20.50 0.00 3.51
8278 14447 1.610886 CGGGAAAAGGACAGGAGAACC 60.611 57.143 0.00 0.00 0.00 3.62
8301 14470 1.450312 GGTGATCGGAACCTGCTGG 60.450 63.158 8.29 8.29 34.66 4.85
8404 14573 1.818674 GTTTGTAATGGGGTCAGCTGG 59.181 52.381 15.13 0.00 0.00 4.85
8502 14671 1.376609 GCCCATTGTCGTCATGGACC 61.377 60.000 10.64 0.00 37.66 4.46
8504 14673 0.391130 CCATTGTCGTCATGGACCGT 60.391 55.000 4.78 0.00 37.66 4.83
8602 14771 6.321848 TCCCTTTGTTTCTCGTTTTTATCC 57.678 37.500 0.00 0.00 0.00 2.59
8622 14791 0.733150 GCTCCAACCGATTAACCAGC 59.267 55.000 0.00 0.00 0.00 4.85
8664 14833 2.034558 CCACGAGATTTTGTGTGCCTTT 59.965 45.455 3.12 0.00 37.05 3.11
8775 14964 5.358922 GCTCTATGCTTTTCTCAGTCAGAT 58.641 41.667 0.00 0.00 38.95 2.90
8779 14968 1.663135 GCTTTTCTCAGTCAGATCGGC 59.337 52.381 0.00 0.00 0.00 5.54
8780 14969 2.275318 CTTTTCTCAGTCAGATCGGCC 58.725 52.381 0.00 0.00 0.00 6.13
8793 14982 2.499289 AGATCGGCCTATTGGATGCTAG 59.501 50.000 0.00 0.00 34.57 3.42
8794 14983 0.321671 TCGGCCTATTGGATGCTAGC 59.678 55.000 8.10 8.10 34.57 3.42
8795 14984 0.322975 CGGCCTATTGGATGCTAGCT 59.677 55.000 17.23 0.83 34.57 3.32
8796 14985 1.818642 GGCCTATTGGATGCTAGCTG 58.181 55.000 17.23 0.00 34.57 4.24
8797 14986 1.349026 GGCCTATTGGATGCTAGCTGA 59.651 52.381 17.23 0.00 34.57 4.26
8799 14988 3.198635 GGCCTATTGGATGCTAGCTGATA 59.801 47.826 17.23 6.17 34.57 2.15
8801 14990 4.081198 GCCTATTGGATGCTAGCTGATACT 60.081 45.833 17.23 0.00 34.57 2.12
8802 14991 5.127845 GCCTATTGGATGCTAGCTGATACTA 59.872 44.000 17.23 0.00 34.57 1.82
8803 14992 6.351371 GCCTATTGGATGCTAGCTGATACTAA 60.351 42.308 17.23 7.25 34.57 2.24
8804 14993 7.615403 CCTATTGGATGCTAGCTGATACTAAA 58.385 38.462 17.23 0.45 34.57 1.85
8805 14994 7.763528 CCTATTGGATGCTAGCTGATACTAAAG 59.236 40.741 17.23 3.53 34.57 1.85
8807 14996 6.090483 TGGATGCTAGCTGATACTAAAGAC 57.910 41.667 17.23 0.00 0.00 3.01
8809 14998 6.155827 GGATGCTAGCTGATACTAAAGACAG 58.844 44.000 17.23 0.00 0.00 3.51
8810 14999 6.015856 GGATGCTAGCTGATACTAAAGACAGA 60.016 42.308 17.23 0.00 32.90 3.41
8811 15000 6.137794 TGCTAGCTGATACTAAAGACAGAC 57.862 41.667 17.23 0.00 32.90 3.51
8813 15002 5.220892 GCTAGCTGATACTAAAGACAGACGT 60.221 44.000 7.70 0.00 32.90 4.34
8814 15003 4.987832 AGCTGATACTAAAGACAGACGTG 58.012 43.478 0.00 0.00 32.90 4.49
8815 15004 4.700692 AGCTGATACTAAAGACAGACGTGA 59.299 41.667 0.00 0.00 32.90 4.35
8816 15005 5.031578 GCTGATACTAAAGACAGACGTGAG 58.968 45.833 0.00 0.00 32.90 3.51
8817 15006 5.562506 TGATACTAAAGACAGACGTGAGG 57.437 43.478 0.00 0.00 0.00 3.86
8818 15007 5.008331 TGATACTAAAGACAGACGTGAGGT 58.992 41.667 0.00 0.00 0.00 3.85
8831 15042 1.306141 TGAGGTGTGGCTAGAGGGG 60.306 63.158 0.00 0.00 0.00 4.79
8859 15070 4.442893 CGGATGCATCTAGTTCCAAGGTTA 60.443 45.833 25.28 0.00 0.00 2.85
8860 15071 5.059833 GGATGCATCTAGTTCCAAGGTTAG 58.940 45.833 25.28 0.00 0.00 2.34
8861 15072 5.163301 GGATGCATCTAGTTCCAAGGTTAGA 60.163 44.000 25.28 0.00 0.00 2.10
8862 15073 5.086104 TGCATCTAGTTCCAAGGTTAGAC 57.914 43.478 0.00 0.00 0.00 2.59
8863 15074 4.530553 TGCATCTAGTTCCAAGGTTAGACA 59.469 41.667 0.00 0.00 0.00 3.41
8866 15077 6.092807 GCATCTAGTTCCAAGGTTAGACAAAG 59.907 42.308 0.00 0.00 0.00 2.77
8876 15141 1.804748 GTTAGACAAAGGCGGAGGTTG 59.195 52.381 0.00 0.00 0.00 3.77
8931 15196 3.431912 GCAACATCACAACATGTCGACTA 59.568 43.478 17.92 3.52 35.87 2.59
8932 15197 4.084066 GCAACATCACAACATGTCGACTAA 60.084 41.667 17.92 0.00 35.87 2.24
8933 15198 5.374080 CAACATCACAACATGTCGACTAAC 58.626 41.667 17.92 0.00 35.87 2.34
8934 15199 4.627058 ACATCACAACATGTCGACTAACA 58.373 39.130 17.92 0.00 30.76 2.41
8935 15200 5.053811 ACATCACAACATGTCGACTAACAA 58.946 37.500 17.92 0.00 30.76 2.83
8936 15201 5.525745 ACATCACAACATGTCGACTAACAAA 59.474 36.000 17.92 0.00 30.76 2.83
8937 15202 6.037720 ACATCACAACATGTCGACTAACAAAA 59.962 34.615 17.92 0.00 30.76 2.44
8938 15203 6.424176 TCACAACATGTCGACTAACAAAAA 57.576 33.333 17.92 0.00 31.81 1.94
8957 15222 5.786401 AAAAATCTCTCATTTCCGACTCG 57.214 39.130 0.00 0.00 0.00 4.18
8958 15223 4.720649 AAATCTCTCATTTCCGACTCGA 57.279 40.909 0.00 0.00 0.00 4.04
8959 15224 4.720649 AATCTCTCATTTCCGACTCGAA 57.279 40.909 0.00 0.00 0.00 3.71
8960 15225 4.927978 ATCTCTCATTTCCGACTCGAAT 57.072 40.909 0.00 0.00 0.00 3.34
8961 15226 6.392625 AATCTCTCATTTCCGACTCGAATA 57.607 37.500 0.00 0.00 0.00 1.75
8962 15227 5.425577 TCTCTCATTTCCGACTCGAATAG 57.574 43.478 0.00 0.00 0.00 1.73
8963 15228 5.123936 TCTCTCATTTCCGACTCGAATAGA 58.876 41.667 0.00 0.00 0.00 1.98
8964 15229 5.765677 TCTCTCATTTCCGACTCGAATAGAT 59.234 40.000 0.00 0.00 0.00 1.98
8965 15230 6.263392 TCTCTCATTTCCGACTCGAATAGATT 59.737 38.462 0.00 0.00 0.00 2.40
8966 15231 6.806751 TCTCATTTCCGACTCGAATAGATTT 58.193 36.000 0.00 0.00 0.00 2.17
8967 15232 7.265673 TCTCATTTCCGACTCGAATAGATTTT 58.734 34.615 0.00 0.00 0.00 1.82
8968 15233 7.764443 TCTCATTTCCGACTCGAATAGATTTTT 59.236 33.333 0.00 0.00 0.00 1.94
8998 15263 8.925161 TTTGAAATAAAGGTTCTTGTCTTGTG 57.075 30.769 0.00 0.00 0.00 3.33
8999 15264 7.038154 TGAAATAAAGGTTCTTGTCTTGTGG 57.962 36.000 0.00 0.00 0.00 4.17
9000 15265 6.040391 TGAAATAAAGGTTCTTGTCTTGTGGG 59.960 38.462 0.00 0.00 0.00 4.61
9001 15266 2.364972 AAGGTTCTTGTCTTGTGGGG 57.635 50.000 0.00 0.00 0.00 4.96
9002 15267 1.518367 AGGTTCTTGTCTTGTGGGGA 58.482 50.000 0.00 0.00 0.00 4.81
9003 15268 1.850345 AGGTTCTTGTCTTGTGGGGAA 59.150 47.619 0.00 0.00 0.00 3.97
9004 15269 1.954382 GGTTCTTGTCTTGTGGGGAAC 59.046 52.381 0.00 0.00 34.27 3.62
9005 15270 1.602377 GTTCTTGTCTTGTGGGGAACG 59.398 52.381 0.00 0.00 0.00 3.95
9006 15271 1.124780 TCTTGTCTTGTGGGGAACGA 58.875 50.000 0.00 0.00 0.00 3.85
9007 15272 1.697432 TCTTGTCTTGTGGGGAACGAT 59.303 47.619 0.00 0.00 0.00 3.73
9008 15273 1.806542 CTTGTCTTGTGGGGAACGATG 59.193 52.381 0.00 0.00 0.00 3.84
9009 15274 0.605319 TGTCTTGTGGGGAACGATGC 60.605 55.000 0.00 0.00 0.00 3.91
9010 15275 0.605319 GTCTTGTGGGGAACGATGCA 60.605 55.000 0.00 0.00 0.00 3.96
9011 15276 0.605319 TCTTGTGGGGAACGATGCAC 60.605 55.000 0.00 0.00 0.00 4.57
9012 15277 0.888736 CTTGTGGGGAACGATGCACA 60.889 55.000 0.00 0.00 0.00 4.57
9013 15278 3.263941 GTGGGGAACGATGCACAC 58.736 61.111 3.40 3.40 44.36 3.82
9014 15279 2.832498 TGGGGAACGATGCACACA 59.168 55.556 0.00 0.00 0.00 3.72
9015 15280 1.378378 TGGGGAACGATGCACACAT 59.622 52.632 0.00 0.00 39.98 3.21
9016 15281 0.251121 TGGGGAACGATGCACACATT 60.251 50.000 0.00 0.00 36.35 2.71
9017 15282 0.887933 GGGGAACGATGCACACATTT 59.112 50.000 0.00 0.00 36.35 2.32
9018 15283 1.272212 GGGGAACGATGCACACATTTT 59.728 47.619 0.00 0.00 36.35 1.82
9019 15284 2.288763 GGGGAACGATGCACACATTTTT 60.289 45.455 0.00 0.00 36.35 1.94
9020 15285 2.730928 GGGAACGATGCACACATTTTTG 59.269 45.455 0.00 0.00 36.35 2.44
9021 15286 2.730928 GGAACGATGCACACATTTTTGG 59.269 45.455 0.00 0.00 36.35 3.28
9022 15287 3.551863 GGAACGATGCACACATTTTTGGA 60.552 43.478 0.00 0.00 36.35 3.53
9023 15288 3.724508 ACGATGCACACATTTTTGGAA 57.275 38.095 0.00 0.00 36.35 3.53
9024 15289 4.255833 ACGATGCACACATTTTTGGAAT 57.744 36.364 0.00 0.00 36.35 3.01
9025 15290 4.236935 ACGATGCACACATTTTTGGAATC 58.763 39.130 0.00 0.00 36.35 2.52
9026 15291 3.613737 CGATGCACACATTTTTGGAATCC 59.386 43.478 0.00 0.00 36.35 3.01
9027 15292 3.023946 TGCACACATTTTTGGAATCCG 57.976 42.857 0.00 0.00 0.00 4.18
9028 15293 2.288702 TGCACACATTTTTGGAATCCGG 60.289 45.455 0.00 0.00 0.00 5.14
9029 15294 2.288763 GCACACATTTTTGGAATCCGGT 60.289 45.455 0.00 0.00 0.00 5.28
9030 15295 3.057174 GCACACATTTTTGGAATCCGGTA 60.057 43.478 0.00 0.00 0.00 4.02
9031 15296 4.381505 GCACACATTTTTGGAATCCGGTAT 60.382 41.667 0.00 0.00 0.00 2.73
9032 15297 5.339990 CACACATTTTTGGAATCCGGTATC 58.660 41.667 0.00 0.33 0.00 2.24
9033 15298 5.013547 ACACATTTTTGGAATCCGGTATCA 58.986 37.500 0.00 0.00 0.00 2.15
9034 15299 5.478679 ACACATTTTTGGAATCCGGTATCAA 59.521 36.000 0.00 0.00 0.00 2.57
9035 15300 5.804979 CACATTTTTGGAATCCGGTATCAAC 59.195 40.000 0.00 0.00 0.00 3.18
9036 15301 5.478679 ACATTTTTGGAATCCGGTATCAACA 59.521 36.000 0.00 0.00 0.00 3.33
9037 15302 5.637006 TTTTTGGAATCCGGTATCAACAG 57.363 39.130 0.00 0.00 0.00 3.16
9038 15303 3.275617 TTGGAATCCGGTATCAACAGG 57.724 47.619 0.00 0.00 41.88 4.00
9039 15304 2.193127 TGGAATCCGGTATCAACAGGT 58.807 47.619 0.00 0.00 41.33 4.00
9040 15305 3.376636 TGGAATCCGGTATCAACAGGTA 58.623 45.455 0.00 0.00 41.33 3.08
9041 15306 3.971305 TGGAATCCGGTATCAACAGGTAT 59.029 43.478 0.00 0.00 41.33 2.73
9042 15307 5.149239 TGGAATCCGGTATCAACAGGTATA 58.851 41.667 0.00 0.00 41.33 1.47
9043 15308 5.603395 TGGAATCCGGTATCAACAGGTATAA 59.397 40.000 0.00 0.00 41.33 0.98
9044 15309 6.271391 TGGAATCCGGTATCAACAGGTATAAT 59.729 38.462 0.00 0.00 41.33 1.28
9045 15310 6.817140 GGAATCCGGTATCAACAGGTATAATC 59.183 42.308 0.00 0.00 41.33 1.75
9046 15311 5.733620 TCCGGTATCAACAGGTATAATCC 57.266 43.478 0.00 0.00 41.33 3.01
9047 15312 4.529377 TCCGGTATCAACAGGTATAATCCC 59.471 45.833 0.00 0.00 41.33 3.85
9048 15313 4.323257 CCGGTATCAACAGGTATAATCCCC 60.323 50.000 0.00 0.00 36.32 4.81
9049 15314 4.530946 CGGTATCAACAGGTATAATCCCCT 59.469 45.833 0.00 0.00 0.00 4.79
9050 15315 5.337330 CGGTATCAACAGGTATAATCCCCTC 60.337 48.000 0.00 0.00 0.00 4.30
9051 15316 5.785940 GGTATCAACAGGTATAATCCCCTCT 59.214 44.000 0.00 0.00 0.00 3.69
9052 15317 6.070710 GGTATCAACAGGTATAATCCCCTCTC 60.071 46.154 0.00 0.00 0.00 3.20
9053 15318 4.232091 TCAACAGGTATAATCCCCTCTCC 58.768 47.826 0.00 0.00 0.00 3.71
9054 15319 2.890814 ACAGGTATAATCCCCTCTCCG 58.109 52.381 0.00 0.00 0.00 4.63
9055 15320 2.449730 ACAGGTATAATCCCCTCTCCGA 59.550 50.000 0.00 0.00 0.00 4.55
9056 15321 3.116862 ACAGGTATAATCCCCTCTCCGAA 60.117 47.826 0.00 0.00 0.00 4.30
9057 15322 3.258622 CAGGTATAATCCCCTCTCCGAAC 59.741 52.174 0.00 0.00 0.00 3.95
9058 15323 3.142407 AGGTATAATCCCCTCTCCGAACT 59.858 47.826 0.00 0.00 0.00 3.01
9059 15324 4.356190 AGGTATAATCCCCTCTCCGAACTA 59.644 45.833 0.00 0.00 0.00 2.24
9060 15325 5.016459 AGGTATAATCCCCTCTCCGAACTAT 59.984 44.000 0.00 0.00 0.00 2.12
9061 15326 5.127356 GGTATAATCCCCTCTCCGAACTATG 59.873 48.000 0.00 0.00 0.00 2.23
9062 15327 2.777459 ATCCCCTCTCCGAACTATGT 57.223 50.000 0.00 0.00 0.00 2.29
9063 15328 2.544844 TCCCCTCTCCGAACTATGTT 57.455 50.000 0.00 0.00 0.00 2.71
9064 15329 2.829023 TCCCCTCTCCGAACTATGTTT 58.171 47.619 0.00 0.00 0.00 2.83
9065 15330 3.178865 TCCCCTCTCCGAACTATGTTTT 58.821 45.455 0.00 0.00 0.00 2.43
9066 15331 3.197116 TCCCCTCTCCGAACTATGTTTTC 59.803 47.826 0.00 0.00 0.00 2.29
9067 15332 3.197983 CCCCTCTCCGAACTATGTTTTCT 59.802 47.826 0.00 0.00 0.00 2.52
9068 15333 4.323562 CCCCTCTCCGAACTATGTTTTCTT 60.324 45.833 0.00 0.00 0.00 2.52
9069 15334 5.246307 CCCTCTCCGAACTATGTTTTCTTT 58.754 41.667 0.00 0.00 0.00 2.52
9070 15335 5.351740 CCCTCTCCGAACTATGTTTTCTTTC 59.648 44.000 0.00 0.00 0.00 2.62
9071 15336 5.932303 CCTCTCCGAACTATGTTTTCTTTCA 59.068 40.000 0.00 0.00 0.00 2.69
9072 15337 6.426937 CCTCTCCGAACTATGTTTTCTTTCAA 59.573 38.462 0.00 0.00 0.00 2.69
9073 15338 7.360438 CCTCTCCGAACTATGTTTTCTTTCAAG 60.360 40.741 0.00 0.00 0.00 3.02
9074 15339 5.997385 TCCGAACTATGTTTTCTTTCAAGC 58.003 37.500 0.00 0.00 0.00 4.01
9075 15340 5.048991 TCCGAACTATGTTTTCTTTCAAGCC 60.049 40.000 0.00 0.00 0.00 4.35
9076 15341 5.048713 CCGAACTATGTTTTCTTTCAAGCCT 60.049 40.000 0.00 0.00 0.00 4.58
9077 15342 6.438763 CGAACTATGTTTTCTTTCAAGCCTT 58.561 36.000 0.00 0.00 0.00 4.35
9078 15343 6.918022 CGAACTATGTTTTCTTTCAAGCCTTT 59.082 34.615 0.00 0.00 0.00 3.11
9079 15344 7.113544 CGAACTATGTTTTCTTTCAAGCCTTTC 59.886 37.037 0.00 0.00 0.00 2.62
9080 15345 7.346751 ACTATGTTTTCTTTCAAGCCTTTCA 57.653 32.000 0.00 0.00 0.00 2.69
9081 15346 7.781056 ACTATGTTTTCTTTCAAGCCTTTCAA 58.219 30.769 0.00 0.00 0.00 2.69
9082 15347 8.424133 ACTATGTTTTCTTTCAAGCCTTTCAAT 58.576 29.630 0.00 0.00 0.00 2.57
9083 15348 7.719778 ATGTTTTCTTTCAAGCCTTTCAATC 57.280 32.000 0.00 0.00 0.00 2.67
9084 15349 6.638610 TGTTTTCTTTCAAGCCTTTCAATCA 58.361 32.000 0.00 0.00 0.00 2.57
9085 15350 7.102346 TGTTTTCTTTCAAGCCTTTCAATCAA 58.898 30.769 0.00 0.00 0.00 2.57
9086 15351 7.769970 TGTTTTCTTTCAAGCCTTTCAATCAAT 59.230 29.630 0.00 0.00 0.00 2.57
9087 15352 7.951530 TTTCTTTCAAGCCTTTCAATCAATC 57.048 32.000 0.00 0.00 0.00 2.67
9088 15353 6.653526 TCTTTCAAGCCTTTCAATCAATCA 57.346 33.333 0.00 0.00 0.00 2.57
9089 15354 7.053316 TCTTTCAAGCCTTTCAATCAATCAA 57.947 32.000 0.00 0.00 0.00 2.57
9090 15355 7.673180 TCTTTCAAGCCTTTCAATCAATCAAT 58.327 30.769 0.00 0.00 0.00 2.57
9091 15356 8.805175 TCTTTCAAGCCTTTCAATCAATCAATA 58.195 29.630 0.00 0.00 0.00 1.90
9092 15357 9.595823 CTTTCAAGCCTTTCAATCAATCAATAT 57.404 29.630 0.00 0.00 0.00 1.28
9093 15358 8.936070 TTCAAGCCTTTCAATCAATCAATATG 57.064 30.769 0.00 0.00 0.00 1.78
9094 15359 8.296211 TCAAGCCTTTCAATCAATCAATATGA 57.704 30.769 0.00 0.00 0.00 2.15
9095 15360 8.192774 TCAAGCCTTTCAATCAATCAATATGAC 58.807 33.333 0.00 0.00 0.00 3.06
9096 15361 7.047460 AGCCTTTCAATCAATCAATATGACC 57.953 36.000 0.00 0.00 0.00 4.02
9097 15362 6.041296 AGCCTTTCAATCAATCAATATGACCC 59.959 38.462 0.00 0.00 0.00 4.46
9098 15363 6.041296 GCCTTTCAATCAATCAATATGACCCT 59.959 38.462 0.00 0.00 0.00 4.34
9099 15364 7.655490 CCTTTCAATCAATCAATATGACCCTC 58.345 38.462 0.00 0.00 0.00 4.30
9100 15365 6.866010 TTCAATCAATCAATATGACCCTCG 57.134 37.500 0.00 0.00 0.00 4.63
9101 15366 5.928976 TCAATCAATCAATATGACCCTCGT 58.071 37.500 0.00 0.00 0.00 4.18
9102 15367 7.061566 TCAATCAATCAATATGACCCTCGTA 57.938 36.000 0.00 0.00 0.00 3.43
9103 15368 7.154656 TCAATCAATCAATATGACCCTCGTAG 58.845 38.462 0.00 0.00 0.00 3.51
9104 15369 5.468540 TCAATCAATATGACCCTCGTAGG 57.531 43.478 0.00 0.00 34.30 3.18
9113 15378 3.622514 CCTCGTAGGGCAGCTCTT 58.377 61.111 0.00 0.00 0.00 2.85
9114 15379 1.142748 CCTCGTAGGGCAGCTCTTG 59.857 63.158 0.00 0.00 0.00 3.02
9128 15393 3.738286 GCTCTTGCTAAAACTCTGAGC 57.262 47.619 4.19 0.00 38.58 4.26
9129 15394 3.070018 GCTCTTGCTAAAACTCTGAGCA 58.930 45.455 4.19 0.00 44.25 4.26
9136 15401 6.639632 TGCTAAAACTCTGAGCAATTTCTT 57.360 33.333 4.19 0.00 43.03 2.52
9137 15402 6.441274 TGCTAAAACTCTGAGCAATTTCTTG 58.559 36.000 4.19 1.13 43.03 3.02
9138 15403 5.860716 GCTAAAACTCTGAGCAATTTCTTGG 59.139 40.000 4.19 0.00 36.20 3.61
9139 15404 6.294176 GCTAAAACTCTGAGCAATTTCTTGGA 60.294 38.462 4.19 0.00 36.20 3.53
9140 15405 5.702349 AAACTCTGAGCAATTTCTTGGAG 57.298 39.130 4.19 6.69 32.72 3.86
9141 15406 4.363991 ACTCTGAGCAATTTCTTGGAGT 57.636 40.909 4.19 7.63 32.72 3.85
9142 15407 4.070716 ACTCTGAGCAATTTCTTGGAGTG 58.929 43.478 4.19 0.00 31.84 3.51
9143 15408 4.070716 CTCTGAGCAATTTCTTGGAGTGT 58.929 43.478 0.00 0.00 32.72 3.55
9144 15409 4.464008 TCTGAGCAATTTCTTGGAGTGTT 58.536 39.130 0.00 0.00 32.72 3.32
9145 15410 4.889409 TCTGAGCAATTTCTTGGAGTGTTT 59.111 37.500 0.00 0.00 32.72 2.83
9146 15411 4.935702 TGAGCAATTTCTTGGAGTGTTTG 58.064 39.130 0.00 0.00 32.72 2.93
9147 15412 4.402155 TGAGCAATTTCTTGGAGTGTTTGT 59.598 37.500 0.00 0.00 32.72 2.83
9148 15413 4.685924 AGCAATTTCTTGGAGTGTTTGTG 58.314 39.130 0.00 0.00 32.72 3.33
9149 15414 3.803778 GCAATTTCTTGGAGTGTTTGTGG 59.196 43.478 0.00 0.00 32.72 4.17
9150 15415 4.441356 GCAATTTCTTGGAGTGTTTGTGGA 60.441 41.667 0.00 0.00 32.72 4.02
9151 15416 5.739935 GCAATTTCTTGGAGTGTTTGTGGAT 60.740 40.000 0.00 0.00 32.72 3.41
9152 15417 6.282930 CAATTTCTTGGAGTGTTTGTGGATT 58.717 36.000 0.00 0.00 0.00 3.01
9153 15418 4.916983 TTCTTGGAGTGTTTGTGGATTG 57.083 40.909 0.00 0.00 0.00 2.67
9154 15419 3.897239 TCTTGGAGTGTTTGTGGATTGT 58.103 40.909 0.00 0.00 0.00 2.71
9155 15420 3.631686 TCTTGGAGTGTTTGTGGATTGTG 59.368 43.478 0.00 0.00 0.00 3.33
9156 15421 1.680735 TGGAGTGTTTGTGGATTGTGC 59.319 47.619 0.00 0.00 0.00 4.57
9157 15422 1.334960 GGAGTGTTTGTGGATTGTGCG 60.335 52.381 0.00 0.00 0.00 5.34
9158 15423 0.667993 AGTGTTTGTGGATTGTGCGG 59.332 50.000 0.00 0.00 0.00 5.69
9159 15424 0.665835 GTGTTTGTGGATTGTGCGGA 59.334 50.000 0.00 0.00 0.00 5.54
9160 15425 1.269448 GTGTTTGTGGATTGTGCGGAT 59.731 47.619 0.00 0.00 0.00 4.18
9161 15426 1.539388 TGTTTGTGGATTGTGCGGATC 59.461 47.619 0.00 0.00 0.00 3.36
9162 15427 1.539388 GTTTGTGGATTGTGCGGATCA 59.461 47.619 0.00 0.00 0.00 2.92
9163 15428 1.452110 TTGTGGATTGTGCGGATCAG 58.548 50.000 0.00 0.00 0.00 2.90
9164 15429 0.612744 TGTGGATTGTGCGGATCAGA 59.387 50.000 0.00 0.00 0.00 3.27
9165 15430 1.210234 TGTGGATTGTGCGGATCAGAT 59.790 47.619 0.00 0.00 0.00 2.90
9166 15431 2.433970 TGTGGATTGTGCGGATCAGATA 59.566 45.455 0.00 0.00 0.00 1.98
9167 15432 3.118445 TGTGGATTGTGCGGATCAGATAA 60.118 43.478 0.00 0.00 0.00 1.75
9168 15433 3.248602 GTGGATTGTGCGGATCAGATAAC 59.751 47.826 0.00 0.00 0.00 1.89
9169 15434 3.134623 TGGATTGTGCGGATCAGATAACT 59.865 43.478 0.00 0.00 0.00 2.24
9170 15435 3.743396 GGATTGTGCGGATCAGATAACTC 59.257 47.826 0.00 0.00 0.00 3.01
9171 15436 3.885724 TTGTGCGGATCAGATAACTCA 57.114 42.857 0.00 0.00 0.00 3.41
9172 15437 4.406648 TTGTGCGGATCAGATAACTCAT 57.593 40.909 0.00 0.00 0.00 2.90
9173 15438 5.529581 TTGTGCGGATCAGATAACTCATA 57.470 39.130 0.00 0.00 0.00 2.15
9174 15439 5.126396 TGTGCGGATCAGATAACTCATAG 57.874 43.478 0.00 0.00 0.00 2.23
9175 15440 3.923461 GTGCGGATCAGATAACTCATAGC 59.077 47.826 0.00 0.00 0.00 2.97
9176 15441 3.829026 TGCGGATCAGATAACTCATAGCT 59.171 43.478 0.00 0.00 0.00 3.32
9177 15442 4.281941 TGCGGATCAGATAACTCATAGCTT 59.718 41.667 0.00 0.00 0.00 3.74
9178 15443 4.862018 GCGGATCAGATAACTCATAGCTTC 59.138 45.833 0.00 0.00 0.00 3.86
9179 15444 5.565637 GCGGATCAGATAACTCATAGCTTCA 60.566 44.000 0.00 0.00 0.00 3.02
9180 15445 6.629128 CGGATCAGATAACTCATAGCTTCAT 58.371 40.000 0.00 0.00 0.00 2.57
9181 15446 7.095910 CGGATCAGATAACTCATAGCTTCATT 58.904 38.462 0.00 0.00 0.00 2.57
9182 15447 7.275341 CGGATCAGATAACTCATAGCTTCATTC 59.725 40.741 0.00 0.00 0.00 2.67
9183 15448 8.313292 GGATCAGATAACTCATAGCTTCATTCT 58.687 37.037 0.00 0.00 0.00 2.40
9184 15449 9.357652 GATCAGATAACTCATAGCTTCATTCTC 57.642 37.037 0.00 0.00 0.00 2.87
9185 15450 8.476064 TCAGATAACTCATAGCTTCATTCTCT 57.524 34.615 0.00 0.00 0.00 3.10
9186 15451 8.358895 TCAGATAACTCATAGCTTCATTCTCTG 58.641 37.037 0.00 0.00 0.00 3.35
9187 15452 7.116662 CAGATAACTCATAGCTTCATTCTCTGC 59.883 40.741 0.00 0.00 0.00 4.26
9188 15453 5.356291 AACTCATAGCTTCATTCTCTGCT 57.644 39.130 0.00 0.00 39.30 4.24
9189 15454 4.947645 ACTCATAGCTTCATTCTCTGCTC 58.052 43.478 0.00 0.00 37.02 4.26
9190 15455 3.974912 TCATAGCTTCATTCTCTGCTCG 58.025 45.455 0.00 0.00 37.02 5.03
9191 15456 3.633986 TCATAGCTTCATTCTCTGCTCGA 59.366 43.478 0.00 0.00 37.02 4.04
9192 15457 4.098501 TCATAGCTTCATTCTCTGCTCGAA 59.901 41.667 0.00 0.00 37.02 3.71
9193 15458 3.540314 AGCTTCATTCTCTGCTCGAAT 57.460 42.857 0.00 0.00 0.00 3.34
9194 15459 3.196463 AGCTTCATTCTCTGCTCGAATG 58.804 45.455 13.46 13.46 45.63 2.67
9195 15460 2.935201 GCTTCATTCTCTGCTCGAATGT 59.065 45.455 16.86 0.00 44.93 2.71
9196 15461 4.115516 GCTTCATTCTCTGCTCGAATGTA 58.884 43.478 16.86 10.48 44.93 2.29
9197 15462 4.568359 GCTTCATTCTCTGCTCGAATGTAA 59.432 41.667 16.86 11.60 44.93 2.41
9198 15463 5.236047 GCTTCATTCTCTGCTCGAATGTAAT 59.764 40.000 16.86 0.00 44.93 1.89
9199 15464 6.422100 GCTTCATTCTCTGCTCGAATGTAATA 59.578 38.462 16.86 2.61 44.93 0.98
9200 15465 7.117523 GCTTCATTCTCTGCTCGAATGTAATAT 59.882 37.037 16.86 0.00 44.93 1.28
9201 15466 7.880059 TCATTCTCTGCTCGAATGTAATATG 57.120 36.000 16.86 0.00 44.93 1.78
9202 15467 6.870439 TCATTCTCTGCTCGAATGTAATATGG 59.130 38.462 16.86 0.00 44.93 2.74
9203 15468 4.560128 TCTCTGCTCGAATGTAATATGGC 58.440 43.478 0.00 0.00 0.00 4.40
9204 15469 3.664107 TCTGCTCGAATGTAATATGGCC 58.336 45.455 0.00 0.00 0.00 5.36
9205 15470 3.070878 TCTGCTCGAATGTAATATGGCCA 59.929 43.478 8.56 8.56 0.00 5.36
9206 15471 3.402110 TGCTCGAATGTAATATGGCCAG 58.598 45.455 13.05 0.00 0.00 4.85
9207 15472 2.744202 GCTCGAATGTAATATGGCCAGG 59.256 50.000 13.05 0.00 0.00 4.45
9208 15473 3.807209 GCTCGAATGTAATATGGCCAGGT 60.807 47.826 13.05 0.00 0.00 4.00
9209 15474 3.738982 TCGAATGTAATATGGCCAGGTG 58.261 45.455 13.05 0.00 0.00 4.00
9210 15475 2.226437 CGAATGTAATATGGCCAGGTGC 59.774 50.000 13.05 2.68 40.16 5.01
9211 15476 3.221771 GAATGTAATATGGCCAGGTGCA 58.778 45.455 13.05 9.00 43.89 4.57
9212 15477 3.530928 ATGTAATATGGCCAGGTGCAT 57.469 42.857 13.05 11.04 43.89 3.96
9213 15478 3.311167 TGTAATATGGCCAGGTGCATT 57.689 42.857 13.05 7.95 43.89 3.56
9214 15479 3.641046 TGTAATATGGCCAGGTGCATTT 58.359 40.909 13.05 0.00 43.89 2.32
9215 15480 3.384146 TGTAATATGGCCAGGTGCATTTG 59.616 43.478 13.05 0.00 43.89 2.32
9216 15481 1.416243 ATATGGCCAGGTGCATTTGG 58.584 50.000 13.05 13.50 43.89 3.28
9217 15482 0.687098 TATGGCCAGGTGCATTTGGG 60.687 55.000 13.05 6.88 43.89 4.12
9219 15484 4.086547 GCCAGGTGCATTTGGGCC 62.087 66.667 17.91 0.00 40.77 5.80
9220 15485 3.393106 CCAGGTGCATTTGGGCCC 61.393 66.667 17.59 17.59 0.00 5.80
9221 15486 2.284112 CAGGTGCATTTGGGCCCT 60.284 61.111 25.70 0.00 35.63 5.19
9222 15487 1.914764 CAGGTGCATTTGGGCCCTT 60.915 57.895 25.70 4.77 33.81 3.95
9223 15488 1.914764 AGGTGCATTTGGGCCCTTG 60.915 57.895 25.70 18.60 32.68 3.61
9224 15489 1.912763 GGTGCATTTGGGCCCTTGA 60.913 57.895 25.70 9.23 0.00 3.02
9225 15490 1.479368 GGTGCATTTGGGCCCTTGAA 61.479 55.000 25.70 15.56 0.00 2.69
9226 15491 0.037046 GTGCATTTGGGCCCTTGAAG 60.037 55.000 25.70 10.38 0.00 3.02
9227 15492 0.178938 TGCATTTGGGCCCTTGAAGA 60.179 50.000 25.70 0.00 0.00 2.87
9228 15493 1.197812 GCATTTGGGCCCTTGAAGAT 58.802 50.000 25.70 0.00 0.00 2.40
9229 15494 1.137675 GCATTTGGGCCCTTGAAGATC 59.862 52.381 25.70 0.52 0.00 2.75
9230 15495 2.459644 CATTTGGGCCCTTGAAGATCA 58.540 47.619 25.70 0.00 0.00 2.92
9231 15496 2.220653 TTTGGGCCCTTGAAGATCAG 57.779 50.000 25.70 0.00 0.00 2.90
9232 15497 0.332632 TTGGGCCCTTGAAGATCAGG 59.667 55.000 25.70 0.00 0.00 3.86
9233 15498 0.549902 TGGGCCCTTGAAGATCAGGA 60.550 55.000 25.70 0.00 0.00 3.86
9234 15499 0.849417 GGGCCCTTGAAGATCAGGAT 59.151 55.000 17.04 0.00 0.00 3.24
9235 15500 1.202867 GGGCCCTTGAAGATCAGGATC 60.203 57.143 17.04 0.95 38.09 3.36
9237 15502 2.975489 GGCCCTTGAAGATCAGGATCTA 59.025 50.000 11.93 0.00 46.75 1.98
9238 15503 3.244387 GGCCCTTGAAGATCAGGATCTAC 60.244 52.174 11.93 0.00 46.75 2.59
9239 15504 3.389329 GCCCTTGAAGATCAGGATCTACA 59.611 47.826 11.93 0.00 46.75 2.74
9240 15505 4.502950 GCCCTTGAAGATCAGGATCTACAG 60.503 50.000 11.93 8.28 46.75 2.74
9241 15506 4.040217 CCCTTGAAGATCAGGATCTACAGG 59.960 50.000 11.93 15.05 46.75 4.00
9242 15507 4.898265 CCTTGAAGATCAGGATCTACAGGA 59.102 45.833 18.14 4.26 46.75 3.86
9243 15508 5.365025 CCTTGAAGATCAGGATCTACAGGAA 59.635 44.000 18.14 6.75 46.75 3.36
9244 15509 6.462768 CCTTGAAGATCAGGATCTACAGGAAG 60.463 46.154 18.14 12.75 46.75 3.46
9245 15510 5.523588 TGAAGATCAGGATCTACAGGAAGT 58.476 41.667 11.93 0.00 46.75 3.01
9246 15511 5.960811 TGAAGATCAGGATCTACAGGAAGTT 59.039 40.000 11.93 0.00 46.75 2.66
9247 15512 5.867903 AGATCAGGATCTACAGGAAGTTG 57.132 43.478 9.98 0.00 45.69 3.16
9248 15513 5.276440 AGATCAGGATCTACAGGAAGTTGT 58.724 41.667 9.98 0.00 45.69 3.32
9249 15514 5.723887 AGATCAGGATCTACAGGAAGTTGTT 59.276 40.000 9.98 0.00 45.69 2.83
9250 15515 5.825593 TCAGGATCTACAGGAAGTTGTTT 57.174 39.130 0.00 0.00 32.56 2.83
9251 15516 6.187727 TCAGGATCTACAGGAAGTTGTTTT 57.812 37.500 0.00 0.00 32.56 2.43
9252 15517 6.601332 TCAGGATCTACAGGAAGTTGTTTTT 58.399 36.000 0.00 0.00 32.56 1.94
9253 15518 6.486657 TCAGGATCTACAGGAAGTTGTTTTTG 59.513 38.462 0.00 0.00 32.56 2.44
9254 15519 6.263168 CAGGATCTACAGGAAGTTGTTTTTGT 59.737 38.462 0.00 0.00 32.56 2.83
9255 15520 7.444183 CAGGATCTACAGGAAGTTGTTTTTGTA 59.556 37.037 0.00 0.00 32.56 2.41
9256 15521 7.996644 AGGATCTACAGGAAGTTGTTTTTGTAA 59.003 33.333 0.00 0.00 32.56 2.41
9257 15522 8.626526 GGATCTACAGGAAGTTGTTTTTGTAAA 58.373 33.333 0.00 0.00 32.56 2.01
9258 15523 9.447040 GATCTACAGGAAGTTGTTTTTGTAAAC 57.553 33.333 0.00 0.00 43.17 2.01
9259 15524 7.764331 TCTACAGGAAGTTGTTTTTGTAAACC 58.236 34.615 0.00 0.00 42.39 3.27
9260 15525 6.347859 ACAGGAAGTTGTTTTTGTAAACCA 57.652 33.333 0.00 0.00 42.39 3.67
9261 15526 6.160684 ACAGGAAGTTGTTTTTGTAAACCAC 58.839 36.000 0.00 0.00 42.39 4.16
9262 15527 5.287513 CAGGAAGTTGTTTTTGTAAACCACG 59.712 40.000 0.00 0.00 41.98 4.94
9263 15528 5.183522 AGGAAGTTGTTTTTGTAAACCACGA 59.816 36.000 0.00 0.00 41.98 4.35
9264 15529 5.513849 GGAAGTTGTTTTTGTAAACCACGAG 59.486 40.000 0.00 0.00 41.98 4.18
9265 15530 4.417506 AGTTGTTTTTGTAAACCACGAGC 58.582 39.130 0.00 0.00 41.98 5.03
9266 15531 3.423996 TGTTTTTGTAAACCACGAGCC 57.576 42.857 0.00 0.00 42.39 4.70
9267 15532 2.223294 TGTTTTTGTAAACCACGAGCCG 60.223 45.455 0.00 0.00 42.39 5.52
9268 15533 0.945813 TTTTGTAAACCACGAGCCGG 59.054 50.000 0.00 0.00 0.00 6.13
9269 15534 0.106335 TTTGTAAACCACGAGCCGGA 59.894 50.000 5.05 0.00 0.00 5.14
9270 15535 0.322322 TTGTAAACCACGAGCCGGAT 59.678 50.000 5.05 0.00 0.00 4.18
9271 15536 0.390603 TGTAAACCACGAGCCGGATG 60.391 55.000 5.05 0.00 0.00 3.51
9272 15537 1.087771 GTAAACCACGAGCCGGATGG 61.088 60.000 5.05 1.22 39.57 3.51
9274 15539 3.605749 AACCACGAGCCGGATGGTG 62.606 63.158 25.80 25.80 46.18 4.17
9275 15540 4.838152 CCACGAGCCGGATGGTGG 62.838 72.222 34.58 34.58 41.76 4.61
9276 15541 3.770040 CACGAGCCGGATGGTGGA 61.770 66.667 25.17 0.00 37.67 4.02
9277 15542 2.764128 ACGAGCCGGATGGTGGAT 60.764 61.111 6.55 0.00 37.67 3.41
9278 15543 2.367202 ACGAGCCGGATGGTGGATT 61.367 57.895 6.55 0.00 37.67 3.01
9279 15544 1.153168 CGAGCCGGATGGTGGATTT 60.153 57.895 5.05 0.00 37.67 2.17
9280 15545 0.748005 CGAGCCGGATGGTGGATTTT 60.748 55.000 5.05 0.00 37.67 1.82
9281 15546 1.474320 CGAGCCGGATGGTGGATTTTA 60.474 52.381 5.05 0.00 37.67 1.52
9282 15547 2.810400 CGAGCCGGATGGTGGATTTTAT 60.810 50.000 5.05 0.00 37.67 1.40
9283 15548 3.222603 GAGCCGGATGGTGGATTTTATT 58.777 45.455 5.05 0.00 37.67 1.40
9284 15549 3.636764 GAGCCGGATGGTGGATTTTATTT 59.363 43.478 5.05 0.00 37.67 1.40
9285 15550 4.030216 AGCCGGATGGTGGATTTTATTTT 58.970 39.130 5.05 0.00 37.67 1.82
9286 15551 4.099419 AGCCGGATGGTGGATTTTATTTTC 59.901 41.667 5.05 0.00 37.67 2.29
9287 15552 4.606961 CCGGATGGTGGATTTTATTTTCG 58.393 43.478 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
98 102 2.571757 CGCTCCACTCCACGCTAA 59.428 61.111 0.00 0.00 0.00 3.09
140 144 2.715749 TCCGTACCACCGATAGAAGA 57.284 50.000 0.00 0.00 39.76 2.87
146 150 2.728435 GGGCTTCCGTACCACCGAT 61.728 63.158 0.00 0.00 0.00 4.18
228 232 5.742255 GCGCCTCAGAAAGTAATAAGGGTAT 60.742 44.000 0.00 0.00 0.00 2.73
249 253 1.739067 AACTGGGTAGATTCAAGCGC 58.261 50.000 0.00 0.00 0.00 5.92
261 265 0.611714 AAATCGACGGCTAACTGGGT 59.388 50.000 0.00 0.00 0.00 4.51
262 266 1.006832 CAAATCGACGGCTAACTGGG 58.993 55.000 0.00 0.00 0.00 4.45
275 279 2.356135 AGATCAAACCGGGTCAAATCG 58.644 47.619 6.32 0.00 0.00 3.34
757 763 1.074248 CCCACCCCACCTACACAAC 59.926 63.158 0.00 0.00 0.00 3.32
758 764 1.386200 ACCCACCCCACCTACACAA 60.386 57.895 0.00 0.00 0.00 3.33
845 851 2.164624 ACGTGAGGACTGAAGTCATAGC 59.835 50.000 12.32 1.48 46.47 2.97
950 958 0.895530 GAGGGTGTCAGAATCCGACA 59.104 55.000 0.00 0.00 41.00 4.35
1140 1152 8.290325 CCTCTTCACAATACCAAAGAGTTAAAC 58.710 37.037 9.41 0.00 41.95 2.01
1423 1438 4.970003 GTCATCGGCGAATGAATAAAAAGG 59.030 41.667 15.93 0.00 37.41 3.11
1599 1617 3.940209 TTAAAACTGCTCATGCTTGGG 57.060 42.857 0.00 0.00 40.48 4.12
1914 1965 9.816354 ACTATAAACAAAGCAGAACACAAATTT 57.184 25.926 0.00 0.00 0.00 1.82
2142 2206 6.792326 AGTACAATCAGCATCATTGACATTG 58.208 36.000 8.74 0.00 35.54 2.82
2169 2233 6.187727 TGGAAGTTGGTTCAAGATTCTAGT 57.812 37.500 0.00 0.00 36.82 2.57
2203 2267 6.908825 TCGCTGCAACTAACAAAATTCTATT 58.091 32.000 0.00 0.00 0.00 1.73
2385 4524 8.918202 AACCACAGAACATTCTTAACTTATGA 57.082 30.769 0.00 0.00 34.74 2.15
2431 4570 1.809133 TTTATCCTACCATCGGGCCA 58.191 50.000 4.39 0.00 37.90 5.36
2436 4575 6.437793 AGGGAGTCTAATTTATCCTACCATCG 59.562 42.308 6.54 0.00 32.18 3.84
2599 4739 7.676683 ATTTACTCTCTACAGGGCTATTTCA 57.323 36.000 0.00 0.00 0.00 2.69
2826 4972 4.521943 GCAATCATGAGAATAACGTCAGC 58.478 43.478 0.09 0.00 0.00 4.26
2872 5019 3.679389 CAGGTCAAGGTAATGCTCAACT 58.321 45.455 0.00 0.00 0.00 3.16
2898 5049 0.677731 CTTTGGCCGCTCATCTTCCA 60.678 55.000 0.00 0.00 0.00 3.53
3144 5300 4.794278 TCACATTCTAGTCGCCTAACAA 57.206 40.909 0.00 0.00 0.00 2.83
3209 6125 9.023962 ACAATTTTATCTTATCAGCTGGAAACA 57.976 29.630 15.13 0.00 39.59 2.83
3433 6465 3.684788 CAGAACAAGTAGTGGGGAAATCG 59.315 47.826 0.00 0.00 0.00 3.34
3720 6756 9.924650 ATACGTTTCAGGTTCCTATAATATGAC 57.075 33.333 0.00 0.00 0.00 3.06
3847 6890 4.828939 TGTGATGGAAGAGCAACAGATTTT 59.171 37.500 0.00 0.00 0.00 1.82
3895 6938 3.181493 CCTTGTTTCTGATAGCCATGTGC 60.181 47.826 0.00 0.00 41.71 4.57
3904 6947 7.020827 AGAATCAACCTCCTTGTTTCTGATA 57.979 36.000 5.86 0.00 43.12 2.15
3983 7036 4.608445 CGAAAACACCAAAAACGTGCAAAA 60.608 37.500 0.00 0.00 34.45 2.44
3990 7043 3.425858 ACAACACGAAAACACCAAAAACG 59.574 39.130 0.00 0.00 0.00 3.60
4006 7059 7.862372 AGAAATACACAATGTCATCAACAACAC 59.138 33.333 0.00 0.00 42.37 3.32
4023 7079 6.017109 CCACCCTGCATAACATAGAAATACAC 60.017 42.308 0.00 0.00 0.00 2.90
4130 7187 8.466798 AGCACAAGGACATTTGTAATAATAACC 58.533 33.333 0.00 0.00 39.17 2.85
4584 7758 1.004394 GGGAGGAACCGGTTTTCTCAT 59.996 52.381 33.11 18.67 40.11 2.90
4595 7769 3.467803 CGATCAGTTATTGGGAGGAACC 58.532 50.000 0.00 0.00 38.08 3.62
4658 7839 5.600696 CAATTCAGTGCTGGTAAAAGGTTT 58.399 37.500 0.00 0.00 0.00 3.27
4661 7842 3.005684 TGCAATTCAGTGCTGGTAAAAGG 59.994 43.478 0.41 0.00 45.17 3.11
4682 10389 2.751259 ACATAGCTGGCAAACTCACATG 59.249 45.455 0.00 0.00 0.00 3.21
4712 10419 9.785982 ATTGGATTCTATCTAGGCTAAAGAAAC 57.214 33.333 14.13 12.14 30.56 2.78
4744 10451 2.225019 GCCAACATCCTTATCGATGCAG 59.775 50.000 8.54 3.77 42.91 4.41
4819 10542 3.412386 ACATTTGGAGTAAGCACCTGTC 58.588 45.455 0.00 0.00 0.00 3.51
5107 10833 6.114187 TGAATGGACAGAACATAGACAGTT 57.886 37.500 0.00 0.00 0.00 3.16
5112 10838 6.586344 GGAGATTGAATGGACAGAACATAGA 58.414 40.000 0.00 0.00 0.00 1.98
5113 10839 5.464722 CGGAGATTGAATGGACAGAACATAG 59.535 44.000 0.00 0.00 0.00 2.23
5146 10872 3.612860 CAGCTTTACTATCACCACGTGAC 59.387 47.826 19.30 0.00 45.65 3.67
5218 10952 3.742369 ACACTGGTAAAATGTCGTAACGG 59.258 43.478 0.00 0.00 0.00 4.44
5407 11170 8.240682 GGTTTGCATATGTAAGAAACACATGTA 58.759 33.333 6.34 0.00 43.62 2.29
5575 11340 2.331451 GCACTGTTTGCCGTCACC 59.669 61.111 0.00 0.00 46.63 4.02
5584 11349 5.275067 ACAAACACATAATGGCACTGTTT 57.725 34.783 0.00 0.00 35.85 2.83
5772 11543 6.775629 ACACCATCTAAAAGAAGGCAAAGTAA 59.224 34.615 0.00 0.00 36.60 2.24
5858 11641 4.084589 TCAAATTCATCACGTTGTGTCTCG 60.085 41.667 0.00 0.00 34.79 4.04
6087 11970 6.769512 ACAAGAAAGAGCTATTAACAGGACA 58.230 36.000 0.00 0.00 0.00 4.02
6452 12552 5.209818 AGAACCTCGACAATCTACACAAA 57.790 39.130 0.00 0.00 0.00 2.83
6477 12577 6.267699 TGTCTCCTTGAGTGTCAAAGATTCTA 59.732 38.462 0.00 0.00 35.73 2.10
6577 12677 1.298157 TGGTTCGAAATGCAGAGGCG 61.298 55.000 0.00 0.00 45.35 5.52
6605 12705 4.226384 TCCATGACATCAGGTATAGCAGT 58.774 43.478 4.48 0.00 0.00 4.40
6706 12807 6.205658 AGGAAAACAGTTAATCTCTGCAACTC 59.794 38.462 0.00 0.00 36.50 3.01
6707 12808 6.064717 AGGAAAACAGTTAATCTCTGCAACT 58.935 36.000 0.00 0.00 36.50 3.16
6990 13103 2.048127 AACAGCTCCTTCGTCGCC 60.048 61.111 0.00 0.00 0.00 5.54
7203 13316 0.596083 CATCTCCAAGCCTACGAGCG 60.596 60.000 0.00 0.00 38.01 5.03
7317 13439 4.082300 TGCTTCTTGCTTGAAACTTGTTCA 60.082 37.500 0.00 0.00 43.37 3.18
7530 13655 3.244249 GGGTGTACCTATGCTCTTCATCC 60.244 52.174 0.44 0.00 36.63 3.51
7555 13680 2.250924 CATTTGCTTTTGGAGAGGGGT 58.749 47.619 0.00 0.00 0.00 4.95
7701 13866 2.122768 CTATGCAACCCCTTCTCCTCT 58.877 52.381 0.00 0.00 0.00 3.69
7734 13899 1.743252 GCTGGCAACCTTCCTCTCG 60.743 63.158 0.00 0.00 0.00 4.04
7776 13941 7.467811 GCACCATCTATTGAAGACAAACCATAG 60.468 40.741 0.00 0.00 39.54 2.23
7813 13981 5.778241 TGACTTCTTACATACCAGAAGACCA 59.222 40.000 14.38 9.28 46.23 4.02
8278 14447 0.460284 CAGGTTCCGATCACCTTCCG 60.460 60.000 0.47 0.00 42.45 4.30
8502 14671 3.181497 CCATCCAAGTTCATTAAGCCACG 60.181 47.826 0.00 0.00 0.00 4.94
8504 14673 2.760092 GCCATCCAAGTTCATTAAGCCA 59.240 45.455 0.00 0.00 0.00 4.75
8575 14744 2.271944 ACGAGAAACAAAGGGAAGGG 57.728 50.000 0.00 0.00 0.00 3.95
8581 14750 4.615541 GCGGATAAAAACGAGAAACAAAGG 59.384 41.667 0.00 0.00 0.00 3.11
8602 14771 1.006832 CTGGTTAATCGGTTGGAGCG 58.993 55.000 0.00 0.00 40.97 5.03
8637 14806 1.879380 CACAAAATCTCGTGGGAGCAA 59.121 47.619 0.00 0.00 40.26 3.91
8638 14807 1.202758 ACACAAAATCTCGTGGGAGCA 60.203 47.619 0.00 0.00 40.26 4.26
8775 14964 0.321671 GCTAGCATCCAATAGGCCGA 59.678 55.000 10.63 0.00 34.71 5.54
8779 14968 5.674052 AGTATCAGCTAGCATCCAATAGG 57.326 43.478 18.83 0.00 0.00 2.57
8780 14969 8.526978 TCTTTAGTATCAGCTAGCATCCAATAG 58.473 37.037 18.83 3.93 0.00 1.73
8793 14982 4.982999 TCACGTCTGTCTTTAGTATCAGC 58.017 43.478 0.00 0.00 0.00 4.26
8794 14983 5.124138 ACCTCACGTCTGTCTTTAGTATCAG 59.876 44.000 0.00 0.00 0.00 2.90
8795 14984 5.008331 ACCTCACGTCTGTCTTTAGTATCA 58.992 41.667 0.00 0.00 0.00 2.15
8796 14985 5.106237 ACACCTCACGTCTGTCTTTAGTATC 60.106 44.000 0.00 0.00 0.00 2.24
8797 14986 4.765856 ACACCTCACGTCTGTCTTTAGTAT 59.234 41.667 0.00 0.00 0.00 2.12
8799 14988 2.957006 ACACCTCACGTCTGTCTTTAGT 59.043 45.455 0.00 0.00 0.00 2.24
8801 14990 2.035449 CCACACCTCACGTCTGTCTTTA 59.965 50.000 0.00 0.00 0.00 1.85
8802 14991 1.202533 CCACACCTCACGTCTGTCTTT 60.203 52.381 0.00 0.00 0.00 2.52
8803 14992 0.389391 CCACACCTCACGTCTGTCTT 59.611 55.000 0.00 0.00 0.00 3.01
8804 14993 2.041976 CCACACCTCACGTCTGTCT 58.958 57.895 0.00 0.00 0.00 3.41
8805 14994 1.664965 GCCACACCTCACGTCTGTC 60.665 63.158 0.00 0.00 0.00 3.51
8807 14996 0.109086 CTAGCCACACCTCACGTCTG 60.109 60.000 0.00 0.00 0.00 3.51
8809 14998 0.171455 CTCTAGCCACACCTCACGTC 59.829 60.000 0.00 0.00 0.00 4.34
8810 14999 1.251527 CCTCTAGCCACACCTCACGT 61.252 60.000 0.00 0.00 0.00 4.49
8811 15000 1.513158 CCTCTAGCCACACCTCACG 59.487 63.158 0.00 0.00 0.00 4.35
8813 15002 1.306141 CCCCTCTAGCCACACCTCA 60.306 63.158 0.00 0.00 0.00 3.86
8814 15003 2.736826 GCCCCTCTAGCCACACCTC 61.737 68.421 0.00 0.00 0.00 3.85
8815 15004 2.689034 GCCCCTCTAGCCACACCT 60.689 66.667 0.00 0.00 0.00 4.00
8816 15005 4.162690 CGCCCCTCTAGCCACACC 62.163 72.222 0.00 0.00 0.00 4.16
8817 15006 4.840005 GCGCCCCTCTAGCCACAC 62.840 72.222 0.00 0.00 0.00 3.82
8831 15042 3.771491 CTAGATGCATCCGCGCGC 61.771 66.667 27.36 23.91 42.97 6.86
8859 15070 1.073199 CCAACCTCCGCCTTTGTCT 59.927 57.895 0.00 0.00 0.00 3.41
8860 15071 2.626780 GCCAACCTCCGCCTTTGTC 61.627 63.158 0.00 0.00 0.00 3.18
8861 15072 2.597510 GCCAACCTCCGCCTTTGT 60.598 61.111 0.00 0.00 0.00 2.83
8862 15073 2.282462 AGCCAACCTCCGCCTTTG 60.282 61.111 0.00 0.00 0.00 2.77
8863 15074 2.034221 GAGCCAACCTCCGCCTTT 59.966 61.111 0.00 0.00 34.35 3.11
8901 15166 2.223548 TGTTGTGATGTTGCAGCAAGTC 60.224 45.455 8.49 10.58 29.49 3.01
8935 15200 5.479306 TCGAGTCGGAAATGAGAGATTTTT 58.521 37.500 13.54 0.00 0.00 1.94
8936 15201 5.073311 TCGAGTCGGAAATGAGAGATTTT 57.927 39.130 13.54 0.00 0.00 1.82
8937 15202 4.720649 TCGAGTCGGAAATGAGAGATTT 57.279 40.909 13.54 0.00 0.00 2.17
8938 15203 4.720649 TTCGAGTCGGAAATGAGAGATT 57.279 40.909 13.54 0.00 0.00 2.40
8939 15204 4.927978 ATTCGAGTCGGAAATGAGAGAT 57.072 40.909 13.54 0.00 0.00 2.75
8940 15205 5.123936 TCTATTCGAGTCGGAAATGAGAGA 58.876 41.667 13.54 3.64 0.00 3.10
8941 15206 5.425577 TCTATTCGAGTCGGAAATGAGAG 57.574 43.478 13.54 1.36 0.00 3.20
8942 15207 6.392625 AATCTATTCGAGTCGGAAATGAGA 57.607 37.500 13.54 6.63 0.00 3.27
8943 15208 7.470289 AAAATCTATTCGAGTCGGAAATGAG 57.530 36.000 13.54 1.03 0.00 2.90
8944 15209 7.843490 AAAAATCTATTCGAGTCGGAAATGA 57.157 32.000 13.54 4.53 0.00 2.57
8972 15237 9.364989 CACAAGACAAGAACCTTTATTTCAAAA 57.635 29.630 0.00 0.00 0.00 2.44
8973 15238 7.978975 CCACAAGACAAGAACCTTTATTTCAAA 59.021 33.333 0.00 0.00 0.00 2.69
8974 15239 7.417342 CCCACAAGACAAGAACCTTTATTTCAA 60.417 37.037 0.00 0.00 0.00 2.69
8975 15240 6.040391 CCCACAAGACAAGAACCTTTATTTCA 59.960 38.462 0.00 0.00 0.00 2.69
8976 15241 6.447162 CCCACAAGACAAGAACCTTTATTTC 58.553 40.000 0.00 0.00 0.00 2.17
8977 15242 5.304357 CCCCACAAGACAAGAACCTTTATTT 59.696 40.000 0.00 0.00 0.00 1.40
8978 15243 4.832823 CCCCACAAGACAAGAACCTTTATT 59.167 41.667 0.00 0.00 0.00 1.40
8979 15244 4.105697 TCCCCACAAGACAAGAACCTTTAT 59.894 41.667 0.00 0.00 0.00 1.40
8980 15245 3.460340 TCCCCACAAGACAAGAACCTTTA 59.540 43.478 0.00 0.00 0.00 1.85
8981 15246 2.243736 TCCCCACAAGACAAGAACCTTT 59.756 45.455 0.00 0.00 0.00 3.11
8982 15247 1.850345 TCCCCACAAGACAAGAACCTT 59.150 47.619 0.00 0.00 0.00 3.50
8983 15248 1.518367 TCCCCACAAGACAAGAACCT 58.482 50.000 0.00 0.00 0.00 3.50
8984 15249 1.954382 GTTCCCCACAAGACAAGAACC 59.046 52.381 0.00 0.00 0.00 3.62
8985 15250 1.602377 CGTTCCCCACAAGACAAGAAC 59.398 52.381 0.00 0.00 0.00 3.01
8986 15251 1.487142 TCGTTCCCCACAAGACAAGAA 59.513 47.619 0.00 0.00 0.00 2.52
8987 15252 1.124780 TCGTTCCCCACAAGACAAGA 58.875 50.000 0.00 0.00 0.00 3.02
8988 15253 1.806542 CATCGTTCCCCACAAGACAAG 59.193 52.381 0.00 0.00 0.00 3.16
8989 15254 1.890876 CATCGTTCCCCACAAGACAA 58.109 50.000 0.00 0.00 0.00 3.18
8990 15255 0.605319 GCATCGTTCCCCACAAGACA 60.605 55.000 0.00 0.00 0.00 3.41
8991 15256 0.605319 TGCATCGTTCCCCACAAGAC 60.605 55.000 0.00 0.00 0.00 3.01
8992 15257 0.605319 GTGCATCGTTCCCCACAAGA 60.605 55.000 0.00 0.00 0.00 3.02
8993 15258 0.888736 TGTGCATCGTTCCCCACAAG 60.889 55.000 0.00 0.00 35.48 3.16
8994 15259 1.149401 TGTGCATCGTTCCCCACAA 59.851 52.632 0.00 0.00 35.48 3.33
8995 15260 1.599518 GTGTGCATCGTTCCCCACA 60.600 57.895 0.00 0.00 35.99 4.17
8996 15261 0.960364 ATGTGTGCATCGTTCCCCAC 60.960 55.000 0.00 0.00 0.00 4.61
8997 15262 0.251121 AATGTGTGCATCGTTCCCCA 60.251 50.000 0.00 0.00 33.50 4.96
8998 15263 0.887933 AAATGTGTGCATCGTTCCCC 59.112 50.000 0.00 0.00 33.50 4.81
8999 15264 2.723124 AAAATGTGTGCATCGTTCCC 57.277 45.000 0.00 0.00 33.50 3.97
9000 15265 2.730928 CCAAAAATGTGTGCATCGTTCC 59.269 45.455 0.00 0.00 33.50 3.62
9001 15266 3.637432 TCCAAAAATGTGTGCATCGTTC 58.363 40.909 0.00 0.00 33.50 3.95
9002 15267 3.724508 TCCAAAAATGTGTGCATCGTT 57.275 38.095 0.00 0.00 33.50 3.85
9003 15268 3.724508 TTCCAAAAATGTGTGCATCGT 57.275 38.095 0.00 0.00 33.50 3.73
9004 15269 3.613737 GGATTCCAAAAATGTGTGCATCG 59.386 43.478 0.00 0.00 33.50 3.84
9005 15270 3.613737 CGGATTCCAAAAATGTGTGCATC 59.386 43.478 3.09 0.00 33.50 3.91
9006 15271 3.587923 CGGATTCCAAAAATGTGTGCAT 58.412 40.909 3.09 0.00 36.80 3.96
9007 15272 2.288702 CCGGATTCCAAAAATGTGTGCA 60.289 45.455 0.00 0.00 0.00 4.57
9008 15273 2.288763 ACCGGATTCCAAAAATGTGTGC 60.289 45.455 9.46 0.00 0.00 4.57
9009 15274 3.658757 ACCGGATTCCAAAAATGTGTG 57.341 42.857 9.46 0.00 0.00 3.82
9010 15275 5.013547 TGATACCGGATTCCAAAAATGTGT 58.986 37.500 9.46 0.00 0.00 3.72
9011 15276 5.574891 TGATACCGGATTCCAAAAATGTG 57.425 39.130 9.46 0.00 0.00 3.21
9012 15277 5.478679 TGTTGATACCGGATTCCAAAAATGT 59.521 36.000 9.46 0.00 0.00 2.71
9013 15278 5.960113 TGTTGATACCGGATTCCAAAAATG 58.040 37.500 9.46 0.00 0.00 2.32
9014 15279 5.127031 CCTGTTGATACCGGATTCCAAAAAT 59.873 40.000 9.46 0.00 30.74 1.82
9015 15280 4.461081 CCTGTTGATACCGGATTCCAAAAA 59.539 41.667 9.46 0.00 30.74 1.94
9016 15281 4.013728 CCTGTTGATACCGGATTCCAAAA 58.986 43.478 9.46 0.81 30.74 2.44
9017 15282 3.009695 ACCTGTTGATACCGGATTCCAAA 59.990 43.478 9.46 0.00 33.27 3.28
9018 15283 2.574369 ACCTGTTGATACCGGATTCCAA 59.426 45.455 9.46 3.69 33.27 3.53
9019 15284 2.193127 ACCTGTTGATACCGGATTCCA 58.807 47.619 9.46 0.00 33.27 3.53
9020 15285 4.618920 ATACCTGTTGATACCGGATTCC 57.381 45.455 9.46 0.00 33.27 3.01
9021 15286 6.817140 GGATTATACCTGTTGATACCGGATTC 59.183 42.308 9.46 4.75 33.27 2.52
9022 15287 6.296259 GGGATTATACCTGTTGATACCGGATT 60.296 42.308 9.46 0.00 33.27 3.01
9023 15288 5.189145 GGGATTATACCTGTTGATACCGGAT 59.811 44.000 9.46 0.00 33.27 4.18
9024 15289 4.529377 GGGATTATACCTGTTGATACCGGA 59.471 45.833 9.46 0.00 33.27 5.14
9025 15290 4.323257 GGGGATTATACCTGTTGATACCGG 60.323 50.000 0.00 0.00 35.01 5.28
9026 15291 4.530946 AGGGGATTATACCTGTTGATACCG 59.469 45.833 0.00 0.00 35.30 4.02
9027 15292 5.785940 AGAGGGGATTATACCTGTTGATACC 59.214 44.000 0.00 0.00 37.18 2.73
9028 15293 6.070710 GGAGAGGGGATTATACCTGTTGATAC 60.071 46.154 0.00 0.00 37.18 2.24
9029 15294 6.023603 GGAGAGGGGATTATACCTGTTGATA 58.976 44.000 0.00 0.00 37.18 2.15
9030 15295 4.846940 GGAGAGGGGATTATACCTGTTGAT 59.153 45.833 0.00 0.00 37.18 2.57
9031 15296 4.232091 GGAGAGGGGATTATACCTGTTGA 58.768 47.826 0.00 0.00 37.18 3.18
9032 15297 3.006967 CGGAGAGGGGATTATACCTGTTG 59.993 52.174 0.00 0.00 37.18 3.33
9033 15298 3.116862 TCGGAGAGGGGATTATACCTGTT 60.117 47.826 0.00 0.00 37.18 3.16
9034 15299 2.449730 TCGGAGAGGGGATTATACCTGT 59.550 50.000 0.00 0.00 37.18 4.00
9035 15300 3.170991 TCGGAGAGGGGATTATACCTG 57.829 52.381 0.00 0.00 37.18 4.00
9036 15301 3.142407 AGTTCGGAGAGGGGATTATACCT 59.858 47.826 0.00 0.00 38.43 3.08
9037 15302 3.508426 AGTTCGGAGAGGGGATTATACC 58.492 50.000 0.00 0.00 38.43 2.73
9038 15303 5.715753 ACATAGTTCGGAGAGGGGATTATAC 59.284 44.000 0.00 0.00 38.43 1.47
9039 15304 5.900437 ACATAGTTCGGAGAGGGGATTATA 58.100 41.667 0.00 0.00 38.43 0.98
9040 15305 4.753186 ACATAGTTCGGAGAGGGGATTAT 58.247 43.478 0.00 0.00 38.43 1.28
9041 15306 4.194678 ACATAGTTCGGAGAGGGGATTA 57.805 45.455 0.00 0.00 38.43 1.75
9042 15307 3.047695 ACATAGTTCGGAGAGGGGATT 57.952 47.619 0.00 0.00 38.43 3.01
9043 15308 2.777459 ACATAGTTCGGAGAGGGGAT 57.223 50.000 0.00 0.00 38.43 3.85
9044 15309 2.544844 AACATAGTTCGGAGAGGGGA 57.455 50.000 0.00 0.00 38.43 4.81
9045 15310 3.197983 AGAAAACATAGTTCGGAGAGGGG 59.802 47.826 0.00 0.00 38.43 4.79
9046 15311 4.473477 AGAAAACATAGTTCGGAGAGGG 57.527 45.455 0.00 0.00 38.43 4.30
9047 15312 5.932303 TGAAAGAAAACATAGTTCGGAGAGG 59.068 40.000 0.00 0.00 38.43 3.69
9048 15313 7.421530 TTGAAAGAAAACATAGTTCGGAGAG 57.578 36.000 0.00 0.00 38.43 3.20
9049 15314 6.073222 GCTTGAAAGAAAACATAGTTCGGAGA 60.073 38.462 0.00 0.00 0.00 3.71
9050 15315 6.080406 GCTTGAAAGAAAACATAGTTCGGAG 58.920 40.000 0.00 0.00 0.00 4.63
9051 15316 5.048991 GGCTTGAAAGAAAACATAGTTCGGA 60.049 40.000 0.00 0.00 0.00 4.55
9052 15317 5.048713 AGGCTTGAAAGAAAACATAGTTCGG 60.049 40.000 0.00 0.00 0.00 4.30
9053 15318 6.002062 AGGCTTGAAAGAAAACATAGTTCG 57.998 37.500 0.00 0.00 0.00 3.95
9054 15319 7.920682 TGAAAGGCTTGAAAGAAAACATAGTTC 59.079 33.333 0.00 0.00 0.00 3.01
9055 15320 7.781056 TGAAAGGCTTGAAAGAAAACATAGTT 58.219 30.769 0.00 0.00 0.00 2.24
9056 15321 7.346751 TGAAAGGCTTGAAAGAAAACATAGT 57.653 32.000 0.00 0.00 0.00 2.12
9057 15322 8.822652 ATTGAAAGGCTTGAAAGAAAACATAG 57.177 30.769 0.00 0.00 0.00 2.23
9058 15323 8.420222 TGATTGAAAGGCTTGAAAGAAAACATA 58.580 29.630 0.00 0.00 0.00 2.29
9059 15324 7.274447 TGATTGAAAGGCTTGAAAGAAAACAT 58.726 30.769 0.00 0.00 0.00 2.71
9060 15325 6.638610 TGATTGAAAGGCTTGAAAGAAAACA 58.361 32.000 0.00 0.00 0.00 2.83
9061 15326 7.538303 TTGATTGAAAGGCTTGAAAGAAAAC 57.462 32.000 0.00 0.00 0.00 2.43
9062 15327 7.986320 TGATTGATTGAAAGGCTTGAAAGAAAA 59.014 29.630 0.00 0.00 0.00 2.29
9063 15328 7.499292 TGATTGATTGAAAGGCTTGAAAGAAA 58.501 30.769 0.00 0.00 0.00 2.52
9064 15329 7.053316 TGATTGATTGAAAGGCTTGAAAGAA 57.947 32.000 0.00 0.00 0.00 2.52
9065 15330 6.653526 TGATTGATTGAAAGGCTTGAAAGA 57.346 33.333 0.00 0.00 0.00 2.52
9066 15331 7.900782 ATTGATTGATTGAAAGGCTTGAAAG 57.099 32.000 0.00 0.00 0.00 2.62
9067 15332 9.373603 CATATTGATTGATTGAAAGGCTTGAAA 57.626 29.630 0.00 0.00 0.00 2.69
9068 15333 8.751242 TCATATTGATTGATTGAAAGGCTTGAA 58.249 29.630 0.00 0.00 0.00 2.69
9069 15334 8.192774 GTCATATTGATTGATTGAAAGGCTTGA 58.807 33.333 0.00 0.00 0.00 3.02
9070 15335 7.437267 GGTCATATTGATTGATTGAAAGGCTTG 59.563 37.037 0.00 0.00 0.00 4.01
9071 15336 7.418254 GGGTCATATTGATTGATTGAAAGGCTT 60.418 37.037 0.00 0.00 0.00 4.35
9072 15337 6.041296 GGGTCATATTGATTGATTGAAAGGCT 59.959 38.462 0.00 0.00 0.00 4.58
9073 15338 6.041296 AGGGTCATATTGATTGATTGAAAGGC 59.959 38.462 0.00 0.00 0.00 4.35
9074 15339 7.521099 CGAGGGTCATATTGATTGATTGAAAGG 60.521 40.741 0.00 0.00 0.00 3.11
9075 15340 7.012704 ACGAGGGTCATATTGATTGATTGAAAG 59.987 37.037 0.00 0.00 0.00 2.62
9076 15341 6.828273 ACGAGGGTCATATTGATTGATTGAAA 59.172 34.615 0.00 0.00 0.00 2.69
9077 15342 6.356556 ACGAGGGTCATATTGATTGATTGAA 58.643 36.000 0.00 0.00 0.00 2.69
9078 15343 5.928976 ACGAGGGTCATATTGATTGATTGA 58.071 37.500 0.00 0.00 0.00 2.57
9079 15344 6.369890 CCTACGAGGGTCATATTGATTGATTG 59.630 42.308 0.00 0.00 0.00 2.67
9080 15345 6.467677 CCTACGAGGGTCATATTGATTGATT 58.532 40.000 0.00 0.00 0.00 2.57
9081 15346 6.042638 CCTACGAGGGTCATATTGATTGAT 57.957 41.667 0.00 0.00 0.00 2.57
9082 15347 5.468540 CCTACGAGGGTCATATTGATTGA 57.531 43.478 0.00 0.00 0.00 2.57
9096 15361 1.142748 CAAGAGCTGCCCTACGAGG 59.857 63.158 0.00 0.00 34.30 4.63
9097 15362 1.520342 GCAAGAGCTGCCCTACGAG 60.520 63.158 0.00 0.00 46.13 4.18
9098 15363 2.579201 GCAAGAGCTGCCCTACGA 59.421 61.111 0.00 0.00 46.13 3.43
9108 15373 3.070018 TGCTCAGAGTTTTAGCAAGAGC 58.930 45.455 0.00 0.00 42.96 4.09
9113 15378 6.441274 CAAGAAATTGCTCAGAGTTTTAGCA 58.559 36.000 0.00 0.00 44.15 3.49
9114 15379 5.860716 CCAAGAAATTGCTCAGAGTTTTAGC 59.139 40.000 0.00 0.00 36.77 3.09
9115 15380 7.040823 ACTCCAAGAAATTGCTCAGAGTTTTAG 60.041 37.037 11.06 0.00 30.43 1.85
9116 15381 6.772716 ACTCCAAGAAATTGCTCAGAGTTTTA 59.227 34.615 11.06 0.00 30.43 1.52
9117 15382 5.595952 ACTCCAAGAAATTGCTCAGAGTTTT 59.404 36.000 11.06 0.00 30.43 2.43
9118 15383 5.009410 CACTCCAAGAAATTGCTCAGAGTTT 59.991 40.000 13.34 0.00 31.56 2.66
9119 15384 4.518211 CACTCCAAGAAATTGCTCAGAGTT 59.482 41.667 13.34 0.94 31.56 3.01
9120 15385 4.070716 CACTCCAAGAAATTGCTCAGAGT 58.929 43.478 11.06 11.06 33.15 3.24
9121 15386 4.070716 ACACTCCAAGAAATTGCTCAGAG 58.929 43.478 10.00 10.00 0.00 3.35
9122 15387 4.090761 ACACTCCAAGAAATTGCTCAGA 57.909 40.909 0.00 0.00 0.00 3.27
9123 15388 4.843220 AACACTCCAAGAAATTGCTCAG 57.157 40.909 0.00 0.00 0.00 3.35
9124 15389 4.402155 ACAAACACTCCAAGAAATTGCTCA 59.598 37.500 0.00 0.00 0.00 4.26
9125 15390 4.741676 CACAAACACTCCAAGAAATTGCTC 59.258 41.667 0.00 0.00 0.00 4.26
9126 15391 4.441913 CCACAAACACTCCAAGAAATTGCT 60.442 41.667 0.00 0.00 0.00 3.91
9127 15392 3.803778 CCACAAACACTCCAAGAAATTGC 59.196 43.478 0.00 0.00 0.00 3.56
9128 15393 5.261209 TCCACAAACACTCCAAGAAATTG 57.739 39.130 0.00 0.00 0.00 2.32
9129 15394 6.127083 ACAATCCACAAACACTCCAAGAAATT 60.127 34.615 0.00 0.00 0.00 1.82
9130 15395 5.363580 ACAATCCACAAACACTCCAAGAAAT 59.636 36.000 0.00 0.00 0.00 2.17
9131 15396 4.709397 ACAATCCACAAACACTCCAAGAAA 59.291 37.500 0.00 0.00 0.00 2.52
9132 15397 4.097741 CACAATCCACAAACACTCCAAGAA 59.902 41.667 0.00 0.00 0.00 2.52
9133 15398 3.631686 CACAATCCACAAACACTCCAAGA 59.368 43.478 0.00 0.00 0.00 3.02
9134 15399 3.796504 GCACAATCCACAAACACTCCAAG 60.797 47.826 0.00 0.00 0.00 3.61
9135 15400 2.100584 GCACAATCCACAAACACTCCAA 59.899 45.455 0.00 0.00 0.00 3.53
9136 15401 1.680735 GCACAATCCACAAACACTCCA 59.319 47.619 0.00 0.00 0.00 3.86
9137 15402 1.334960 CGCACAATCCACAAACACTCC 60.335 52.381 0.00 0.00 0.00 3.85
9138 15403 1.334960 CCGCACAATCCACAAACACTC 60.335 52.381 0.00 0.00 0.00 3.51
9139 15404 0.667993 CCGCACAATCCACAAACACT 59.332 50.000 0.00 0.00 0.00 3.55
9140 15405 0.665835 TCCGCACAATCCACAAACAC 59.334 50.000 0.00 0.00 0.00 3.32
9141 15406 1.539388 GATCCGCACAATCCACAAACA 59.461 47.619 0.00 0.00 0.00 2.83
9142 15407 1.539388 TGATCCGCACAATCCACAAAC 59.461 47.619 0.00 0.00 0.00 2.93
9143 15408 1.811965 CTGATCCGCACAATCCACAAA 59.188 47.619 0.00 0.00 0.00 2.83
9144 15409 1.003003 TCTGATCCGCACAATCCACAA 59.997 47.619 0.00 0.00 0.00 3.33
9145 15410 0.612744 TCTGATCCGCACAATCCACA 59.387 50.000 0.00 0.00 0.00 4.17
9146 15411 1.959042 ATCTGATCCGCACAATCCAC 58.041 50.000 0.00 0.00 0.00 4.02
9147 15412 3.134623 AGTTATCTGATCCGCACAATCCA 59.865 43.478 0.00 0.00 0.00 3.41
9148 15413 3.733337 AGTTATCTGATCCGCACAATCC 58.267 45.455 0.00 0.00 0.00 3.01
9149 15414 4.371786 TGAGTTATCTGATCCGCACAATC 58.628 43.478 0.00 0.00 0.00 2.67
9150 15415 4.406648 TGAGTTATCTGATCCGCACAAT 57.593 40.909 0.00 0.00 0.00 2.71
9151 15416 3.885724 TGAGTTATCTGATCCGCACAA 57.114 42.857 0.00 0.00 0.00 3.33
9152 15417 4.559502 GCTATGAGTTATCTGATCCGCACA 60.560 45.833 0.00 0.00 0.00 4.57
9153 15418 3.923461 GCTATGAGTTATCTGATCCGCAC 59.077 47.826 0.00 0.00 0.00 5.34
9154 15419 3.829026 AGCTATGAGTTATCTGATCCGCA 59.171 43.478 0.00 0.00 0.00 5.69
9155 15420 4.448537 AGCTATGAGTTATCTGATCCGC 57.551 45.455 0.00 0.00 0.00 5.54
9156 15421 6.018589 TGAAGCTATGAGTTATCTGATCCG 57.981 41.667 0.00 0.00 0.00 4.18
9157 15422 8.313292 AGAATGAAGCTATGAGTTATCTGATCC 58.687 37.037 0.00 0.00 0.00 3.36
9158 15423 9.357652 GAGAATGAAGCTATGAGTTATCTGATC 57.642 37.037 0.00 0.00 0.00 2.92
9159 15424 9.092338 AGAGAATGAAGCTATGAGTTATCTGAT 57.908 33.333 0.00 0.00 0.00 2.90
9160 15425 8.358895 CAGAGAATGAAGCTATGAGTTATCTGA 58.641 37.037 12.60 0.00 37.19 3.27
9161 15426 7.116662 GCAGAGAATGAAGCTATGAGTTATCTG 59.883 40.741 13.18 13.18 37.73 2.90
9162 15427 7.015487 AGCAGAGAATGAAGCTATGAGTTATCT 59.985 37.037 0.00 0.00 35.19 1.98
9163 15428 7.153985 AGCAGAGAATGAAGCTATGAGTTATC 58.846 38.462 0.00 0.00 35.19 1.75
9164 15429 7.065120 AGCAGAGAATGAAGCTATGAGTTAT 57.935 36.000 0.00 0.00 35.19 1.89
9165 15430 6.477053 AGCAGAGAATGAAGCTATGAGTTA 57.523 37.500 0.00 0.00 35.19 2.24
9166 15431 5.356291 AGCAGAGAATGAAGCTATGAGTT 57.644 39.130 0.00 0.00 35.19 3.01
9167 15432 4.499526 CGAGCAGAGAATGAAGCTATGAGT 60.500 45.833 0.00 0.00 37.48 3.41
9168 15433 3.982701 CGAGCAGAGAATGAAGCTATGAG 59.017 47.826 0.00 0.00 37.48 2.90
9169 15434 3.633986 TCGAGCAGAGAATGAAGCTATGA 59.366 43.478 0.00 0.00 37.48 2.15
9170 15435 3.974912 TCGAGCAGAGAATGAAGCTATG 58.025 45.455 0.00 0.00 37.48 2.23
9171 15436 4.662468 TTCGAGCAGAGAATGAAGCTAT 57.338 40.909 0.00 0.00 37.48 2.97
9172 15437 4.662468 ATTCGAGCAGAGAATGAAGCTA 57.338 40.909 0.00 0.00 37.00 3.32
9173 15438 3.540314 ATTCGAGCAGAGAATGAAGCT 57.460 42.857 0.00 0.00 37.00 3.74
9179 15444 5.641209 GCCATATTACATTCGAGCAGAGAAT 59.359 40.000 0.00 0.00 38.72 2.40
9180 15445 4.991056 GCCATATTACATTCGAGCAGAGAA 59.009 41.667 0.00 0.00 0.00 2.87
9181 15446 4.560128 GCCATATTACATTCGAGCAGAGA 58.440 43.478 0.00 0.00 0.00 3.10
9182 15447 3.681897 GGCCATATTACATTCGAGCAGAG 59.318 47.826 0.00 0.00 0.00 3.35
9183 15448 3.070878 TGGCCATATTACATTCGAGCAGA 59.929 43.478 0.00 0.00 0.00 4.26
9184 15449 3.402110 TGGCCATATTACATTCGAGCAG 58.598 45.455 0.00 0.00 0.00 4.24
9185 15450 3.402110 CTGGCCATATTACATTCGAGCA 58.598 45.455 5.51 0.00 0.00 4.26
9186 15451 2.744202 CCTGGCCATATTACATTCGAGC 59.256 50.000 5.51 0.00 0.00 5.03
9187 15452 3.748048 CACCTGGCCATATTACATTCGAG 59.252 47.826 5.51 0.00 0.00 4.04
9188 15453 3.738982 CACCTGGCCATATTACATTCGA 58.261 45.455 5.51 0.00 0.00 3.71
9189 15454 2.226437 GCACCTGGCCATATTACATTCG 59.774 50.000 5.51 0.00 36.11 3.34
9190 15455 3.221771 TGCACCTGGCCATATTACATTC 58.778 45.455 5.51 0.00 43.89 2.67
9191 15456 3.311167 TGCACCTGGCCATATTACATT 57.689 42.857 5.51 0.00 43.89 2.71
9192 15457 3.530928 ATGCACCTGGCCATATTACAT 57.469 42.857 5.51 4.10 43.89 2.29
9193 15458 3.311167 AATGCACCTGGCCATATTACA 57.689 42.857 5.51 1.39 43.89 2.41
9194 15459 3.243839 CCAAATGCACCTGGCCATATTAC 60.244 47.826 5.51 0.00 43.89 1.89
9195 15460 2.964464 CCAAATGCACCTGGCCATATTA 59.036 45.455 5.51 0.00 43.89 0.98
9196 15461 1.764134 CCAAATGCACCTGGCCATATT 59.236 47.619 5.51 0.00 43.89 1.28
9197 15462 1.416243 CCAAATGCACCTGGCCATAT 58.584 50.000 5.51 0.00 43.89 1.78
9198 15463 0.687098 CCCAAATGCACCTGGCCATA 60.687 55.000 5.51 0.00 43.89 2.74
9199 15464 1.991167 CCCAAATGCACCTGGCCAT 60.991 57.895 5.51 0.00 43.89 4.40
9200 15465 2.604079 CCCAAATGCACCTGGCCA 60.604 61.111 4.71 4.71 43.89 5.36
9201 15466 4.086547 GCCCAAATGCACCTGGCC 62.087 66.667 9.94 0.00 43.89 5.36
9202 15467 4.086547 GGCCCAAATGCACCTGGC 62.087 66.667 9.94 9.60 45.13 4.85
9203 15468 3.393106 GGGCCCAAATGCACCTGG 61.393 66.667 19.95 8.65 0.00 4.45
9204 15469 1.914764 AAGGGCCCAAATGCACCTG 60.915 57.895 27.56 0.00 34.27 4.00
9205 15470 1.914764 CAAGGGCCCAAATGCACCT 60.915 57.895 27.56 0.00 34.27 4.00
9206 15471 1.479368 TTCAAGGGCCCAAATGCACC 61.479 55.000 27.56 0.00 34.27 5.01
9207 15472 0.037046 CTTCAAGGGCCCAAATGCAC 60.037 55.000 27.56 0.00 33.81 4.57
9208 15473 0.178938 TCTTCAAGGGCCCAAATGCA 60.179 50.000 27.56 9.53 0.00 3.96
9209 15474 1.137675 GATCTTCAAGGGCCCAAATGC 59.862 52.381 27.56 2.91 0.00 3.56
9210 15475 2.429610 CTGATCTTCAAGGGCCCAAATG 59.570 50.000 27.56 19.86 0.00 2.32
9211 15476 2.625087 CCTGATCTTCAAGGGCCCAAAT 60.625 50.000 27.56 6.76 0.00 2.32
9212 15477 1.272648 CCTGATCTTCAAGGGCCCAAA 60.273 52.381 27.56 14.31 0.00 3.28
9213 15478 0.332632 CCTGATCTTCAAGGGCCCAA 59.667 55.000 27.56 8.98 0.00 4.12
9214 15479 0.549902 TCCTGATCTTCAAGGGCCCA 60.550 55.000 27.56 0.78 0.00 5.36
9215 15480 0.849417 ATCCTGATCTTCAAGGGCCC 59.151 55.000 16.46 16.46 0.00 5.80
9216 15481 1.773653 AGATCCTGATCTTCAAGGGCC 59.226 52.381 3.80 0.00 45.31 5.80
9217 15482 3.389329 TGTAGATCCTGATCTTCAAGGGC 59.611 47.826 14.43 0.00 45.31 5.19
9218 15483 4.040217 CCTGTAGATCCTGATCTTCAAGGG 59.960 50.000 14.43 10.23 45.31 3.95
9219 15484 4.898265 TCCTGTAGATCCTGATCTTCAAGG 59.102 45.833 14.43 16.52 45.31 3.61
9220 15485 6.098124 ACTTCCTGTAGATCCTGATCTTCAAG 59.902 42.308 14.43 11.84 45.31 3.02
9221 15486 5.960811 ACTTCCTGTAGATCCTGATCTTCAA 59.039 40.000 14.43 0.48 45.31 2.69
9222 15487 5.523588 ACTTCCTGTAGATCCTGATCTTCA 58.476 41.667 14.43 13.96 45.31 3.02
9223 15488 6.127196 ACAACTTCCTGTAGATCCTGATCTTC 60.127 42.308 14.43 10.30 45.31 2.87
9224 15489 5.723887 ACAACTTCCTGTAGATCCTGATCTT 59.276 40.000 14.43 0.66 45.31 2.40
9226 15491 5.606348 ACAACTTCCTGTAGATCCTGATC 57.394 43.478 0.00 0.00 38.09 2.92
9227 15492 6.380079 AAACAACTTCCTGTAGATCCTGAT 57.620 37.500 0.00 0.00 0.00 2.90
9228 15493 5.825593 AAACAACTTCCTGTAGATCCTGA 57.174 39.130 0.00 0.00 0.00 3.86
9229 15494 6.263168 ACAAAAACAACTTCCTGTAGATCCTG 59.737 38.462 0.00 0.00 0.00 3.86
9230 15495 6.365520 ACAAAAACAACTTCCTGTAGATCCT 58.634 36.000 0.00 0.00 0.00 3.24
9231 15496 6.635030 ACAAAAACAACTTCCTGTAGATCC 57.365 37.500 0.00 0.00 0.00 3.36
9232 15497 9.447040 GTTTACAAAAACAACTTCCTGTAGATC 57.553 33.333 0.00 0.00 43.73 2.75
9233 15498 8.410912 GGTTTACAAAAACAACTTCCTGTAGAT 58.589 33.333 3.66 0.00 45.68 1.98
9234 15499 7.393796 TGGTTTACAAAAACAACTTCCTGTAGA 59.606 33.333 3.66 0.00 45.68 2.59
9235 15500 7.486870 GTGGTTTACAAAAACAACTTCCTGTAG 59.513 37.037 3.66 0.00 43.49 2.74
9236 15501 7.314393 GTGGTTTACAAAAACAACTTCCTGTA 58.686 34.615 3.66 0.00 43.49 2.74
9237 15502 6.160684 GTGGTTTACAAAAACAACTTCCTGT 58.839 36.000 3.66 0.00 43.49 4.00
9238 15503 5.287513 CGTGGTTTACAAAAACAACTTCCTG 59.712 40.000 6.88 0.00 44.30 3.86
9239 15504 5.183522 TCGTGGTTTACAAAAACAACTTCCT 59.816 36.000 6.88 0.00 44.30 3.36
9240 15505 5.400703 TCGTGGTTTACAAAAACAACTTCC 58.599 37.500 6.88 0.00 44.30 3.46
9241 15506 5.004061 GCTCGTGGTTTACAAAAACAACTTC 59.996 40.000 6.88 0.00 44.30 3.01
9242 15507 4.860352 GCTCGTGGTTTACAAAAACAACTT 59.140 37.500 6.88 0.00 44.30 2.66
9243 15508 4.417506 GCTCGTGGTTTACAAAAACAACT 58.582 39.130 6.88 0.00 44.30 3.16
9244 15509 3.548668 GGCTCGTGGTTTACAAAAACAAC 59.451 43.478 3.66 1.53 45.68 3.32
9245 15510 3.731264 CGGCTCGTGGTTTACAAAAACAA 60.731 43.478 3.66 0.00 45.68 2.83
9246 15511 2.223294 CGGCTCGTGGTTTACAAAAACA 60.223 45.455 3.66 0.00 45.68 2.83
9247 15512 2.377880 CGGCTCGTGGTTTACAAAAAC 58.622 47.619 0.00 0.00 43.58 2.43
9248 15513 1.334243 CCGGCTCGTGGTTTACAAAAA 59.666 47.619 0.00 0.00 0.00 1.94
9249 15514 0.945813 CCGGCTCGTGGTTTACAAAA 59.054 50.000 0.00 0.00 0.00 2.44
9250 15515 0.106335 TCCGGCTCGTGGTTTACAAA 59.894 50.000 0.00 0.00 0.00 2.83
9251 15516 0.322322 ATCCGGCTCGTGGTTTACAA 59.678 50.000 0.00 0.00 0.00 2.41
9252 15517 0.390603 CATCCGGCTCGTGGTTTACA 60.391 55.000 0.00 0.00 0.00 2.41
9253 15518 1.087771 CCATCCGGCTCGTGGTTTAC 61.088 60.000 0.00 0.00 0.00 2.01
9254 15519 1.219664 CCATCCGGCTCGTGGTTTA 59.780 57.895 0.00 0.00 0.00 2.01
9255 15520 2.046314 CCATCCGGCTCGTGGTTT 60.046 61.111 0.00 0.00 0.00 3.27
9256 15521 3.319198 ACCATCCGGCTCGTGGTT 61.319 61.111 12.87 1.44 43.44 3.67
9257 15522 4.082523 CACCATCCGGCTCGTGGT 62.083 66.667 12.87 12.87 46.72 4.16
9258 15523 4.838152 CCACCATCCGGCTCGTGG 62.838 72.222 7.72 7.72 39.85 4.94
9259 15524 2.593468 AATCCACCATCCGGCTCGTG 62.593 60.000 0.00 0.00 34.57 4.35
9260 15525 1.910580 AAATCCACCATCCGGCTCGT 61.911 55.000 0.00 0.00 34.57 4.18
9261 15526 0.748005 AAAATCCACCATCCGGCTCG 60.748 55.000 0.00 0.00 34.57 5.03
9262 15527 2.341846 TAAAATCCACCATCCGGCTC 57.658 50.000 0.00 0.00 34.57 4.70
9263 15528 3.312736 AATAAAATCCACCATCCGGCT 57.687 42.857 0.00 0.00 34.57 5.52
9264 15529 4.368315 GAAAATAAAATCCACCATCCGGC 58.632 43.478 0.00 0.00 34.57 6.13
9265 15530 4.606961 CGAAAATAAAATCCACCATCCGG 58.393 43.478 0.00 0.00 38.77 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.