Multiple sequence alignment - TraesCS6A01G148100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G148100 chr6A 100.000 2712 0 0 1 2712 129315999 129318710 0.000000e+00 5009.0
1 TraesCS6A01G148100 chr6A 83.857 223 32 4 1 221 107835763 107835543 2.740000e-50 209.0
2 TraesCS6A01G148100 chr6D 91.994 1299 68 14 786 2079 106048631 106049898 0.000000e+00 1790.0
3 TraesCS6A01G148100 chr6D 86.989 661 33 14 2101 2712 106052275 106052931 0.000000e+00 695.0
4 TraesCS6A01G148100 chr6D 89.101 367 24 7 402 767 106048135 106048486 2.480000e-120 442.0
5 TraesCS6A01G148100 chr6D 97.297 37 0 1 752 787 106048498 106048534 8.110000e-06 62.1
6 TraesCS6A01G148100 chr6B 91.835 1041 69 5 796 1827 192737977 192739010 0.000000e+00 1437.0
7 TraesCS6A01G148100 chr6B 87.872 437 25 6 2281 2691 192866360 192866794 3.140000e-134 488.0
8 TraesCS6A01G148100 chr6B 87.202 336 20 11 477 790 192737496 192737830 7.140000e-96 361.0
9 TraesCS6A01G148100 chr6B 92.000 175 11 3 2100 2272 192840141 192840314 2.700000e-60 243.0
10 TraesCS6A01G148100 chr6B 90.972 144 12 1 259 401 192730987 192731130 2.760000e-45 193.0
11 TraesCS6A01G148100 chr6B 93.478 46 3 0 2390 2435 519164298 519164253 4.850000e-08 69.4
12 TraesCS6A01G148100 chr5D 84.712 399 40 15 1233 1614 373763303 373763697 1.970000e-101 379.0
13 TraesCS6A01G148100 chr5D 85.019 267 33 4 846 1109 373762939 373763201 5.760000e-67 265.0
14 TraesCS6A01G148100 chr5D 84.305 223 31 4 1 221 32981275 32981055 5.880000e-52 215.0
15 TraesCS6A01G148100 chr5B 91.667 228 18 1 1233 1460 445174015 445174241 5.640000e-82 315.0
16 TraesCS6A01G148100 chr5B 83.895 267 32 7 846 1109 445173655 445173913 7.500000e-61 244.0
17 TraesCS6A01G148100 chr5B 93.827 81 5 0 1534 1614 445176983 445177063 3.670000e-24 122.0
18 TraesCS6A01G148100 chr7A 91.150 226 17 3 1 225 53169679 53169456 1.220000e-78 303.0
19 TraesCS6A01G148100 chr7A 82.927 82 6 7 2363 2439 386348990 386348912 1.740000e-07 67.6
20 TraesCS6A01G148100 chr1B 78.866 388 60 17 1238 1617 428801993 428802366 2.700000e-60 243.0
21 TraesCS6A01G148100 chr2A 83.408 223 30 6 1 221 755458400 755458617 1.650000e-47 200.0
22 TraesCS6A01G148100 chr4B 81.938 227 36 5 1 225 72719020 72718797 1.280000e-43 187.0
23 TraesCS6A01G148100 chr4B 91.176 136 12 0 1233 1368 5466296 5466431 4.610000e-43 185.0
24 TraesCS6A01G148100 chr4B 93.103 116 8 0 993 1108 459947255 459947140 1.290000e-38 171.0
25 TraesCS6A01G148100 chr4A 91.667 132 11 0 1237 1368 601060003 601060134 1.660000e-42 183.0
26 TraesCS6A01G148100 chr4A 95.413 109 5 0 997 1105 90518910 90519018 9.980000e-40 174.0
27 TraesCS6A01G148100 chr4A 93.162 117 8 0 993 1109 90591195 90591311 3.590000e-39 172.0
28 TraesCS6A01G148100 chr4A 94.545 110 6 0 997 1106 601059807 601059916 1.290000e-38 171.0
29 TraesCS6A01G148100 chr7B 81.614 223 37 4 1 221 688127588 688127368 5.970000e-42 182.0
30 TraesCS6A01G148100 chr7B 90.000 50 2 2 2389 2436 292837649 292837697 8.110000e-06 62.1
31 TraesCS6A01G148100 chr4D 94.643 112 6 0 997 1108 373933838 373933727 9.980000e-40 174.0
32 TraesCS6A01G148100 chr2B 88.889 135 15 0 1241 1375 677856465 677856331 1.670000e-37 167.0
33 TraesCS6A01G148100 chr2B 88.333 120 14 0 1239 1358 678199599 678199480 7.830000e-31 145.0
34 TraesCS6A01G148100 chr2B 89.855 69 7 0 1543 1611 678088503 678088435 3.720000e-14 89.8
35 TraesCS6A01G148100 chr2D 89.231 130 14 0 1241 1370 565484743 565484614 2.160000e-36 163.0
36 TraesCS6A01G148100 chr2D 88.571 70 8 0 1542 1611 565590574 565590505 4.810000e-13 86.1
37 TraesCS6A01G148100 chr2D 83.529 85 13 1 62 146 513224341 513224258 8.050000e-11 78.7
38 TraesCS6A01G148100 chr3A 91.589 107 8 1 1 107 701176758 701176863 2.180000e-31 147.0
39 TraesCS6A01G148100 chr7D 88.889 72 8 0 1541 1612 586766114 586766185 3.720000e-14 89.8
40 TraesCS6A01G148100 chr7D 88.889 72 8 0 1541 1612 586783978 586784049 3.720000e-14 89.8
41 TraesCS6A01G148100 chr7D 83.544 79 5 7 2363 2436 356908464 356908539 1.740000e-07 67.6
42 TraesCS6A01G148100 chr1A 84.746 59 5 3 2362 2417 369082228 369082171 3.770000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G148100 chr6A 129315999 129318710 2711 False 5009.000 5009 100.000000 1 2712 1 chr6A.!!$F1 2711
1 TraesCS6A01G148100 chr6D 106048135 106052931 4796 False 747.275 1790 91.345250 402 2712 4 chr6D.!!$F1 2310
2 TraesCS6A01G148100 chr6B 192737496 192739010 1514 False 899.000 1437 89.518500 477 1827 2 chr6B.!!$F4 1350
3 TraesCS6A01G148100 chr5D 373762939 373763697 758 False 322.000 379 84.865500 846 1614 2 chr5D.!!$F1 768
4 TraesCS6A01G148100 chr5B 445173655 445177063 3408 False 227.000 315 89.796333 846 1614 3 chr5B.!!$F1 768


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
938 1148 0.035534 CATTCCCATCACGACCACCA 60.036 55.0 0.0 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2600 7900 0.321671 TGCCTTCCTCACTTCCTTCG 59.678 55.0 0.0 0.0 0.0 3.79 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.734755 TTGCACATAGGGAATCAGGG 57.265 50.000 0.00 0.00 0.00 4.45
20 21 1.595311 TGCACATAGGGAATCAGGGT 58.405 50.000 0.00 0.00 0.00 4.34
21 22 1.922447 TGCACATAGGGAATCAGGGTT 59.078 47.619 0.00 0.00 0.00 4.11
22 23 2.092429 TGCACATAGGGAATCAGGGTTC 60.092 50.000 0.00 0.00 0.00 3.62
23 24 2.173569 GCACATAGGGAATCAGGGTTCT 59.826 50.000 0.00 0.00 0.00 3.01
24 25 3.745797 GCACATAGGGAATCAGGGTTCTC 60.746 52.174 0.00 0.00 0.00 2.87
25 26 3.455910 CACATAGGGAATCAGGGTTCTCA 59.544 47.826 0.00 0.00 30.80 3.27
26 27 4.080356 CACATAGGGAATCAGGGTTCTCAA 60.080 45.833 0.00 0.00 30.80 3.02
27 28 4.728860 ACATAGGGAATCAGGGTTCTCAAT 59.271 41.667 0.00 0.00 30.80 2.57
28 29 5.911178 ACATAGGGAATCAGGGTTCTCAATA 59.089 40.000 0.00 0.00 30.80 1.90
29 30 6.389869 ACATAGGGAATCAGGGTTCTCAATAA 59.610 38.462 0.00 0.00 30.80 1.40
30 31 5.379706 AGGGAATCAGGGTTCTCAATAAG 57.620 43.478 0.00 0.00 30.80 1.73
31 32 3.885901 GGGAATCAGGGTTCTCAATAAGC 59.114 47.826 0.00 0.00 0.00 3.09
32 33 3.885901 GGAATCAGGGTTCTCAATAAGCC 59.114 47.826 0.00 0.00 45.47 4.35
36 37 2.396590 GGGTTCTCAATAAGCCGTCA 57.603 50.000 0.00 0.00 37.28 4.35
37 38 2.919228 GGGTTCTCAATAAGCCGTCAT 58.081 47.619 0.00 0.00 37.28 3.06
38 39 2.614057 GGGTTCTCAATAAGCCGTCATG 59.386 50.000 0.00 0.00 37.28 3.07
39 40 2.032178 GGTTCTCAATAAGCCGTCATGC 59.968 50.000 0.00 0.00 0.00 4.06
40 41 2.939103 GTTCTCAATAAGCCGTCATGCT 59.061 45.455 0.00 0.00 45.43 3.79
46 47 4.085876 AGCCGTCATGCTTGCTTT 57.914 50.000 0.00 0.00 38.85 3.51
47 48 1.582968 AGCCGTCATGCTTGCTTTG 59.417 52.632 0.00 0.00 38.85 2.77
48 49 2.090524 GCCGTCATGCTTGCTTTGC 61.091 57.895 0.00 0.00 0.00 3.68
49 50 1.444895 CCGTCATGCTTGCTTTGCC 60.445 57.895 0.00 0.00 0.00 4.52
50 51 1.286570 CGTCATGCTTGCTTTGCCA 59.713 52.632 0.00 0.00 0.00 4.92
51 52 0.318869 CGTCATGCTTGCTTTGCCAA 60.319 50.000 0.00 0.00 0.00 4.52
52 53 1.868469 GTCATGCTTGCTTTGCCAAA 58.132 45.000 0.00 0.00 0.00 3.28
53 54 2.211806 GTCATGCTTGCTTTGCCAAAA 58.788 42.857 0.00 0.00 0.00 2.44
54 55 2.222445 GTCATGCTTGCTTTGCCAAAAG 59.778 45.455 0.00 0.00 44.81 2.27
55 56 2.158928 TCATGCTTGCTTTGCCAAAAGT 60.159 40.909 0.00 0.00 44.02 2.66
56 57 1.654317 TGCTTGCTTTGCCAAAAGTG 58.346 45.000 0.00 0.00 44.02 3.16
57 58 0.305617 GCTTGCTTTGCCAAAAGTGC 59.694 50.000 0.00 0.00 44.02 4.40
58 59 0.939419 CTTGCTTTGCCAAAAGTGCC 59.061 50.000 0.00 0.00 44.02 5.01
59 60 0.251354 TTGCTTTGCCAAAAGTGCCA 59.749 45.000 0.00 0.00 44.02 4.92
60 61 0.251354 TGCTTTGCCAAAAGTGCCAA 59.749 45.000 0.00 0.00 44.02 4.52
61 62 0.939419 GCTTTGCCAAAAGTGCCAAG 59.061 50.000 0.00 0.00 44.02 3.61
62 63 1.743431 GCTTTGCCAAAAGTGCCAAGT 60.743 47.619 0.00 0.00 44.02 3.16
63 64 2.631267 CTTTGCCAAAAGTGCCAAGTT 58.369 42.857 0.00 0.00 38.40 2.66
64 65 3.791245 CTTTGCCAAAAGTGCCAAGTTA 58.209 40.909 0.00 0.00 38.40 2.24
65 66 3.895232 TTGCCAAAAGTGCCAAGTTAA 57.105 38.095 0.00 0.00 0.00 2.01
66 67 3.895232 TGCCAAAAGTGCCAAGTTAAA 57.105 38.095 0.00 0.00 0.00 1.52
67 68 4.207891 TGCCAAAAGTGCCAAGTTAAAA 57.792 36.364 0.00 0.00 0.00 1.52
68 69 3.935828 TGCCAAAAGTGCCAAGTTAAAAC 59.064 39.130 0.00 0.00 0.00 2.43
69 70 3.935828 GCCAAAAGTGCCAAGTTAAAACA 59.064 39.130 0.00 0.00 0.00 2.83
70 71 4.393371 GCCAAAAGTGCCAAGTTAAAACAA 59.607 37.500 0.00 0.00 0.00 2.83
71 72 5.065859 GCCAAAAGTGCCAAGTTAAAACAAT 59.934 36.000 0.00 0.00 0.00 2.71
72 73 6.485393 CCAAAAGTGCCAAGTTAAAACAATG 58.515 36.000 0.00 0.00 0.00 2.82
73 74 6.314896 CCAAAAGTGCCAAGTTAAAACAATGA 59.685 34.615 0.00 0.00 0.00 2.57
74 75 7.148340 CCAAAAGTGCCAAGTTAAAACAATGAA 60.148 33.333 0.00 0.00 0.00 2.57
75 76 8.397148 CAAAAGTGCCAAGTTAAAACAATGAAT 58.603 29.630 0.00 0.00 0.00 2.57
76 77 7.481275 AAGTGCCAAGTTAAAACAATGAATG 57.519 32.000 0.00 0.00 0.00 2.67
77 78 6.581712 AGTGCCAAGTTAAAACAATGAATGT 58.418 32.000 0.00 0.00 46.82 2.71
78 79 6.701400 AGTGCCAAGTTAAAACAATGAATGTC 59.299 34.615 0.00 0.00 42.99 3.06
79 80 6.701400 GTGCCAAGTTAAAACAATGAATGTCT 59.299 34.615 0.00 0.00 42.99 3.41
80 81 6.922957 TGCCAAGTTAAAACAATGAATGTCTC 59.077 34.615 0.00 0.00 42.99 3.36
81 82 6.088085 GCCAAGTTAAAACAATGAATGTCTCG 59.912 38.462 0.00 0.00 42.99 4.04
82 83 7.359595 CCAAGTTAAAACAATGAATGTCTCGA 58.640 34.615 0.00 0.00 42.99 4.04
83 84 7.860373 CCAAGTTAAAACAATGAATGTCTCGAA 59.140 33.333 0.00 0.00 42.99 3.71
84 85 9.232082 CAAGTTAAAACAATGAATGTCTCGAAA 57.768 29.630 0.00 0.00 42.99 3.46
85 86 9.965824 AAGTTAAAACAATGAATGTCTCGAAAT 57.034 25.926 0.00 0.00 42.99 2.17
86 87 9.612620 AGTTAAAACAATGAATGTCTCGAAATC 57.387 29.630 0.00 0.00 42.99 2.17
87 88 8.850452 GTTAAAACAATGAATGTCTCGAAATCC 58.150 33.333 0.00 0.00 42.99 3.01
88 89 5.567138 AACAATGAATGTCTCGAAATCCC 57.433 39.130 0.00 0.00 42.99 3.85
89 90 4.588899 ACAATGAATGTCTCGAAATCCCA 58.411 39.130 0.00 0.00 37.96 4.37
90 91 5.195940 ACAATGAATGTCTCGAAATCCCAT 58.804 37.500 0.00 0.00 37.96 4.00
91 92 5.653769 ACAATGAATGTCTCGAAATCCCATT 59.346 36.000 0.00 0.00 37.96 3.16
92 93 6.183360 ACAATGAATGTCTCGAAATCCCATTC 60.183 38.462 11.91 11.91 37.96 2.67
93 94 4.199310 TGAATGTCTCGAAATCCCATTCC 58.801 43.478 14.37 4.03 40.25 3.01
94 95 4.080356 TGAATGTCTCGAAATCCCATTCCT 60.080 41.667 14.37 0.00 40.25 3.36
95 96 3.543680 TGTCTCGAAATCCCATTCCTC 57.456 47.619 0.00 0.00 0.00 3.71
96 97 2.170607 TGTCTCGAAATCCCATTCCTCC 59.829 50.000 0.00 0.00 0.00 4.30
97 98 2.436173 GTCTCGAAATCCCATTCCTCCT 59.564 50.000 0.00 0.00 0.00 3.69
98 99 3.115390 TCTCGAAATCCCATTCCTCCTT 58.885 45.455 0.00 0.00 0.00 3.36
99 100 3.523564 TCTCGAAATCCCATTCCTCCTTT 59.476 43.478 0.00 0.00 0.00 3.11
100 101 4.719773 TCTCGAAATCCCATTCCTCCTTTA 59.280 41.667 0.00 0.00 0.00 1.85
101 102 4.777463 TCGAAATCCCATTCCTCCTTTAC 58.223 43.478 0.00 0.00 0.00 2.01
102 103 4.473559 TCGAAATCCCATTCCTCCTTTACT 59.526 41.667 0.00 0.00 0.00 2.24
103 104 4.816925 CGAAATCCCATTCCTCCTTTACTC 59.183 45.833 0.00 0.00 0.00 2.59
104 105 5.396884 CGAAATCCCATTCCTCCTTTACTCT 60.397 44.000 0.00 0.00 0.00 3.24
105 106 6.408770 AAATCCCATTCCTCCTTTACTCTT 57.591 37.500 0.00 0.00 0.00 2.85
106 107 7.525158 AAATCCCATTCCTCCTTTACTCTTA 57.475 36.000 0.00 0.00 0.00 2.10
107 108 6.755542 ATCCCATTCCTCCTTTACTCTTAG 57.244 41.667 0.00 0.00 0.00 2.18
108 109 4.969359 TCCCATTCCTCCTTTACTCTTAGG 59.031 45.833 0.00 0.00 0.00 2.69
109 110 4.722279 CCCATTCCTCCTTTACTCTTAGGT 59.278 45.833 0.00 0.00 33.15 3.08
110 111 5.903589 CCCATTCCTCCTTTACTCTTAGGTA 59.096 44.000 0.00 0.00 33.15 3.08
111 112 6.559157 CCCATTCCTCCTTTACTCTTAGGTAT 59.441 42.308 0.00 0.00 33.15 2.73
112 113 7.445945 CCATTCCTCCTTTACTCTTAGGTATG 58.554 42.308 0.00 0.00 35.83 2.39
113 114 6.481434 TTCCTCCTTTACTCTTAGGTATGC 57.519 41.667 0.00 0.00 33.15 3.14
114 115 5.525484 TCCTCCTTTACTCTTAGGTATGCA 58.475 41.667 0.00 0.00 33.15 3.96
115 116 5.363005 TCCTCCTTTACTCTTAGGTATGCAC 59.637 44.000 0.00 0.00 33.15 4.57
116 117 5.128827 CCTCCTTTACTCTTAGGTATGCACA 59.871 44.000 0.00 0.00 33.15 4.57
117 118 6.183361 CCTCCTTTACTCTTAGGTATGCACAT 60.183 42.308 0.00 0.00 33.15 3.21
118 119 6.817184 TCCTTTACTCTTAGGTATGCACATC 58.183 40.000 0.00 0.00 33.15 3.06
119 120 6.611642 TCCTTTACTCTTAGGTATGCACATCT 59.388 38.462 0.00 0.00 33.15 2.90
120 121 7.125811 TCCTTTACTCTTAGGTATGCACATCTT 59.874 37.037 0.00 0.00 33.15 2.40
121 122 7.439655 CCTTTACTCTTAGGTATGCACATCTTC 59.560 40.741 0.00 0.00 0.00 2.87
122 123 5.283457 ACTCTTAGGTATGCACATCTTCC 57.717 43.478 0.00 0.00 0.00 3.46
123 124 4.716784 ACTCTTAGGTATGCACATCTTCCA 59.283 41.667 0.00 0.00 0.00 3.53
124 125 5.023533 TCTTAGGTATGCACATCTTCCAC 57.976 43.478 0.00 0.00 0.00 4.02
125 126 2.717639 AGGTATGCACATCTTCCACC 57.282 50.000 0.00 0.00 0.00 4.61
126 127 1.915489 AGGTATGCACATCTTCCACCA 59.085 47.619 0.00 0.00 0.00 4.17
127 128 2.017049 GGTATGCACATCTTCCACCAC 58.983 52.381 0.00 0.00 0.00 4.16
128 129 2.617788 GGTATGCACATCTTCCACCACA 60.618 50.000 0.00 0.00 0.00 4.17
129 130 1.538047 ATGCACATCTTCCACCACAC 58.462 50.000 0.00 0.00 0.00 3.82
130 131 0.182299 TGCACATCTTCCACCACACA 59.818 50.000 0.00 0.00 0.00 3.72
131 132 1.317613 GCACATCTTCCACCACACAA 58.682 50.000 0.00 0.00 0.00 3.33
132 133 1.680735 GCACATCTTCCACCACACAAA 59.319 47.619 0.00 0.00 0.00 2.83
133 134 2.543653 GCACATCTTCCACCACACAAAC 60.544 50.000 0.00 0.00 0.00 2.93
134 135 2.951642 CACATCTTCCACCACACAAACT 59.048 45.455 0.00 0.00 0.00 2.66
135 136 4.133820 CACATCTTCCACCACACAAACTA 58.866 43.478 0.00 0.00 0.00 2.24
136 137 4.214119 CACATCTTCCACCACACAAACTAG 59.786 45.833 0.00 0.00 0.00 2.57
137 138 4.141482 ACATCTTCCACCACACAAACTAGT 60.141 41.667 0.00 0.00 0.00 2.57
138 139 3.804036 TCTTCCACCACACAAACTAGTG 58.196 45.455 0.00 0.00 44.93 2.74
139 140 1.961793 TCCACCACACAAACTAGTGC 58.038 50.000 0.00 0.00 43.23 4.40
140 141 1.210722 TCCACCACACAAACTAGTGCA 59.789 47.619 0.00 0.00 43.23 4.57
141 142 2.158682 TCCACCACACAAACTAGTGCAT 60.159 45.455 0.00 0.00 43.23 3.96
142 143 2.622942 CCACCACACAAACTAGTGCATT 59.377 45.455 0.00 0.00 43.23 3.56
143 144 3.304659 CCACCACACAAACTAGTGCATTC 60.305 47.826 0.00 0.00 43.23 2.67
144 145 3.565482 CACCACACAAACTAGTGCATTCT 59.435 43.478 0.00 0.00 43.23 2.40
145 146 3.815401 ACCACACAAACTAGTGCATTCTC 59.185 43.478 0.00 0.00 43.23 2.87
146 147 4.067896 CCACACAAACTAGTGCATTCTCT 58.932 43.478 0.00 0.00 43.23 3.10
147 148 4.516698 CCACACAAACTAGTGCATTCTCTT 59.483 41.667 0.00 0.00 43.23 2.85
148 149 5.446709 CACACAAACTAGTGCATTCTCTTG 58.553 41.667 0.00 0.00 43.23 3.02
149 150 5.008019 CACACAAACTAGTGCATTCTCTTGT 59.992 40.000 0.00 0.00 43.23 3.16
150 151 5.008019 ACACAAACTAGTGCATTCTCTTGTG 59.992 40.000 22.26 22.26 43.23 3.33
151 152 5.008019 CACAAACTAGTGCATTCTCTTGTGT 59.992 40.000 18.31 1.20 32.04 3.72
152 153 5.008019 ACAAACTAGTGCATTCTCTTGTGTG 59.992 40.000 0.00 5.61 34.89 3.82
153 154 4.607293 ACTAGTGCATTCTCTTGTGTGA 57.393 40.909 0.00 0.00 0.00 3.58
154 155 5.157940 ACTAGTGCATTCTCTTGTGTGAT 57.842 39.130 0.00 0.00 0.00 3.06
155 156 4.934001 ACTAGTGCATTCTCTTGTGTGATG 59.066 41.667 0.00 0.00 0.00 3.07
156 157 2.486982 AGTGCATTCTCTTGTGTGATGC 59.513 45.455 0.00 0.00 0.00 3.91
157 158 2.227149 GTGCATTCTCTTGTGTGATGCA 59.773 45.455 5.31 5.31 40.64 3.96
158 159 3.086282 TGCATTCTCTTGTGTGATGCAT 58.914 40.909 0.00 0.00 38.44 3.96
159 160 3.128068 TGCATTCTCTTGTGTGATGCATC 59.872 43.478 20.14 20.14 38.44 3.91
160 161 3.128068 GCATTCTCTTGTGTGATGCATCA 59.872 43.478 25.42 25.42 34.12 3.07
161 162 4.202020 GCATTCTCTTGTGTGATGCATCAT 60.202 41.667 30.89 9.38 39.30 2.45
162 163 5.511571 CATTCTCTTGTGTGATGCATCATC 58.488 41.667 30.89 24.80 40.88 2.92
163 164 4.210724 TCTCTTGTGTGATGCATCATCA 57.789 40.909 30.89 26.76 46.84 3.07
169 170 2.319622 TGATGCATCATCACCCCCA 58.680 52.632 25.42 0.00 44.60 4.96
170 171 0.106569 TGATGCATCATCACCCCCAC 60.107 55.000 25.42 0.00 44.60 4.61
171 172 0.825010 GATGCATCATCACCCCCACC 60.825 60.000 21.92 0.00 40.28 4.61
172 173 1.582853 ATGCATCATCACCCCCACCA 61.583 55.000 0.00 0.00 0.00 4.17
173 174 1.000233 GCATCATCACCCCCACCAA 60.000 57.895 0.00 0.00 0.00 3.67
174 175 0.614415 GCATCATCACCCCCACCAAA 60.614 55.000 0.00 0.00 0.00 3.28
175 176 1.935799 CATCATCACCCCCACCAAAA 58.064 50.000 0.00 0.00 0.00 2.44
176 177 2.255406 CATCATCACCCCCACCAAAAA 58.745 47.619 0.00 0.00 0.00 1.94
177 178 1.710816 TCATCACCCCCACCAAAAAC 58.289 50.000 0.00 0.00 0.00 2.43
178 179 0.316841 CATCACCCCCACCAAAAACG 59.683 55.000 0.00 0.00 0.00 3.60
179 180 0.186386 ATCACCCCCACCAAAAACGA 59.814 50.000 0.00 0.00 0.00 3.85
180 181 0.466555 TCACCCCCACCAAAAACGAG 60.467 55.000 0.00 0.00 0.00 4.18
181 182 0.466555 CACCCCCACCAAAAACGAGA 60.467 55.000 0.00 0.00 0.00 4.04
182 183 0.179001 ACCCCCACCAAAAACGAGAG 60.179 55.000 0.00 0.00 0.00 3.20
183 184 0.109723 CCCCCACCAAAAACGAGAGA 59.890 55.000 0.00 0.00 0.00 3.10
184 185 1.271926 CCCCCACCAAAAACGAGAGAT 60.272 52.381 0.00 0.00 0.00 2.75
185 186 2.084546 CCCCACCAAAAACGAGAGATC 58.915 52.381 0.00 0.00 0.00 2.75
186 187 2.290323 CCCCACCAAAAACGAGAGATCT 60.290 50.000 0.00 0.00 0.00 2.75
187 188 3.003480 CCCACCAAAAACGAGAGATCTC 58.997 50.000 15.29 15.29 39.55 2.75
188 189 3.557054 CCCACCAAAAACGAGAGATCTCA 60.557 47.826 24.39 0.00 43.00 3.27
189 190 4.256920 CCACCAAAAACGAGAGATCTCAT 58.743 43.478 24.39 9.72 43.00 2.90
190 191 4.331168 CCACCAAAAACGAGAGATCTCATC 59.669 45.833 24.39 16.42 43.00 2.92
191 192 4.331168 CACCAAAAACGAGAGATCTCATCC 59.669 45.833 24.39 11.76 43.00 3.51
192 193 3.553511 CCAAAAACGAGAGATCTCATCCG 59.446 47.826 24.39 23.06 43.00 4.18
193 194 4.177026 CAAAAACGAGAGATCTCATCCGT 58.823 43.478 24.39 23.64 43.00 4.69
194 195 5.340803 CAAAAACGAGAGATCTCATCCGTA 58.659 41.667 26.49 0.00 43.00 4.02
195 196 5.578005 AAAACGAGAGATCTCATCCGTAA 57.422 39.130 26.49 0.00 43.00 3.18
196 197 5.776173 AAACGAGAGATCTCATCCGTAAT 57.224 39.130 26.49 19.37 43.00 1.89
197 198 5.776173 AACGAGAGATCTCATCCGTAATT 57.224 39.130 26.49 15.38 43.00 1.40
198 199 5.365403 ACGAGAGATCTCATCCGTAATTC 57.635 43.478 25.66 12.30 43.00 2.17
199 200 5.067273 ACGAGAGATCTCATCCGTAATTCT 58.933 41.667 25.66 9.25 43.00 2.40
200 201 5.533154 ACGAGAGATCTCATCCGTAATTCTT 59.467 40.000 25.66 6.17 43.00 2.52
201 202 6.039941 ACGAGAGATCTCATCCGTAATTCTTT 59.960 38.462 25.66 4.07 43.00 2.52
202 203 6.362016 CGAGAGATCTCATCCGTAATTCTTTG 59.638 42.308 24.39 0.00 43.00 2.77
203 204 5.988561 AGAGATCTCATCCGTAATTCTTTGC 59.011 40.000 24.39 0.00 0.00 3.68
204 205 5.674525 AGATCTCATCCGTAATTCTTTGCA 58.325 37.500 0.00 0.00 0.00 4.08
205 206 5.757320 AGATCTCATCCGTAATTCTTTGCAG 59.243 40.000 0.00 0.00 0.00 4.41
206 207 5.084818 TCTCATCCGTAATTCTTTGCAGA 57.915 39.130 0.00 0.00 0.00 4.26
207 208 5.674525 TCTCATCCGTAATTCTTTGCAGAT 58.325 37.500 0.00 0.00 0.00 2.90
208 209 6.115446 TCTCATCCGTAATTCTTTGCAGATT 58.885 36.000 0.00 0.00 0.00 2.40
209 210 6.599244 TCTCATCCGTAATTCTTTGCAGATTT 59.401 34.615 0.00 0.00 0.00 2.17
210 211 7.121168 TCTCATCCGTAATTCTTTGCAGATTTT 59.879 33.333 0.00 0.00 0.00 1.82
211 212 7.250569 TCATCCGTAATTCTTTGCAGATTTTC 58.749 34.615 0.00 0.00 0.00 2.29
212 213 6.817765 TCCGTAATTCTTTGCAGATTTTCT 57.182 33.333 0.00 0.00 0.00 2.52
213 214 7.214467 TCCGTAATTCTTTGCAGATTTTCTT 57.786 32.000 0.00 0.00 0.00 2.52
214 215 8.330466 TCCGTAATTCTTTGCAGATTTTCTTA 57.670 30.769 0.00 0.00 0.00 2.10
215 216 8.450964 TCCGTAATTCTTTGCAGATTTTCTTAG 58.549 33.333 0.00 0.00 0.00 2.18
216 217 8.450964 CCGTAATTCTTTGCAGATTTTCTTAGA 58.549 33.333 0.00 0.00 0.00 2.10
217 218 9.825972 CGTAATTCTTTGCAGATTTTCTTAGAA 57.174 29.630 0.00 0.00 0.00 2.10
226 227 9.912634 TTGCAGATTTTCTTAGAAATTGTTAGG 57.087 29.630 8.31 0.00 29.75 2.69
227 228 8.028938 TGCAGATTTTCTTAGAAATTGTTAGGC 58.971 33.333 8.31 7.10 29.75 3.93
228 229 8.246871 GCAGATTTTCTTAGAAATTGTTAGGCT 58.753 33.333 8.31 0.00 29.75 4.58
231 232 9.914131 GATTTTCTTAGAAATTGTTAGGCTTGT 57.086 29.630 8.31 0.00 29.75 3.16
235 236 8.025243 TCTTAGAAATTGTTAGGCTTGTTACG 57.975 34.615 0.00 0.00 0.00 3.18
236 237 5.622770 AGAAATTGTTAGGCTTGTTACGG 57.377 39.130 0.00 0.00 0.00 4.02
237 238 4.457949 AGAAATTGTTAGGCTTGTTACGGG 59.542 41.667 0.00 0.00 0.00 5.28
238 239 2.188062 TTGTTAGGCTTGTTACGGGG 57.812 50.000 0.00 0.00 0.00 5.73
239 240 1.058284 TGTTAGGCTTGTTACGGGGT 58.942 50.000 0.00 0.00 0.00 4.95
240 241 1.420891 TGTTAGGCTTGTTACGGGGTT 59.579 47.619 0.00 0.00 0.00 4.11
241 242 2.158638 TGTTAGGCTTGTTACGGGGTTT 60.159 45.455 0.00 0.00 0.00 3.27
242 243 2.477845 TAGGCTTGTTACGGGGTTTC 57.522 50.000 0.00 0.00 0.00 2.78
243 244 0.251033 AGGCTTGTTACGGGGTTTCC 60.251 55.000 0.00 0.00 0.00 3.13
254 255 3.093555 GGTTTCCCCCTACCCACC 58.906 66.667 0.00 0.00 0.00 4.61
255 256 2.619446 GGTTTCCCCCTACCCACCC 61.619 68.421 0.00 0.00 0.00 4.61
256 257 2.611486 TTTCCCCCTACCCACCCG 60.611 66.667 0.00 0.00 0.00 5.28
257 258 3.191186 TTTCCCCCTACCCACCCGA 62.191 63.158 0.00 0.00 0.00 5.14
258 259 2.495705 TTTCCCCCTACCCACCCGAT 62.496 60.000 0.00 0.00 0.00 4.18
259 260 2.367784 CCCCCTACCCACCCGATT 60.368 66.667 0.00 0.00 0.00 3.34
260 261 2.004693 CCCCCTACCCACCCGATTT 61.005 63.158 0.00 0.00 0.00 2.17
261 262 1.577291 CCCCCTACCCACCCGATTTT 61.577 60.000 0.00 0.00 0.00 1.82
262 263 0.106868 CCCCTACCCACCCGATTTTC 60.107 60.000 0.00 0.00 0.00 2.29
263 264 0.621609 CCCTACCCACCCGATTTTCA 59.378 55.000 0.00 0.00 0.00 2.69
264 265 1.408266 CCCTACCCACCCGATTTTCAG 60.408 57.143 0.00 0.00 0.00 3.02
265 266 1.408266 CCTACCCACCCGATTTTCAGG 60.408 57.143 0.00 0.00 0.00 3.86
266 267 1.557832 CTACCCACCCGATTTTCAGGA 59.442 52.381 0.00 0.00 0.00 3.86
267 268 0.328258 ACCCACCCGATTTTCAGGAG 59.672 55.000 0.00 0.00 0.00 3.69
268 269 0.394352 CCCACCCGATTTTCAGGAGG 60.394 60.000 0.00 0.00 0.00 4.30
271 272 3.175133 CCCGATTTTCAGGAGGGTG 57.825 57.895 0.00 0.00 37.36 4.61
272 273 0.394352 CCCGATTTTCAGGAGGGTGG 60.394 60.000 0.00 0.00 37.36 4.61
273 274 0.394352 CCGATTTTCAGGAGGGTGGG 60.394 60.000 0.00 0.00 0.00 4.61
274 275 1.032114 CGATTTTCAGGAGGGTGGGC 61.032 60.000 0.00 0.00 0.00 5.36
275 276 0.684479 GATTTTCAGGAGGGTGGGCC 60.684 60.000 0.00 0.00 0.00 5.80
289 290 4.118312 GGCCCCCTCTCCCCCTTA 62.118 72.222 0.00 0.00 0.00 2.69
290 291 2.448736 GCCCCCTCTCCCCCTTAG 60.449 72.222 0.00 0.00 0.00 2.18
291 292 3.129976 CCCCCTCTCCCCCTTAGT 58.870 66.667 0.00 0.00 0.00 2.24
292 293 1.074395 CCCCCTCTCCCCCTTAGTC 60.074 68.421 0.00 0.00 0.00 2.59
293 294 1.074395 CCCCTCTCCCCCTTAGTCC 60.074 68.421 0.00 0.00 0.00 3.85
294 295 1.710341 CCCTCTCCCCCTTAGTCCA 59.290 63.158 0.00 0.00 0.00 4.02
295 296 0.044244 CCCTCTCCCCCTTAGTCCAA 59.956 60.000 0.00 0.00 0.00 3.53
296 297 1.345526 CCCTCTCCCCCTTAGTCCAAT 60.346 57.143 0.00 0.00 0.00 3.16
297 298 2.050918 CCTCTCCCCCTTAGTCCAATC 58.949 57.143 0.00 0.00 0.00 2.67
298 299 1.689273 CTCTCCCCCTTAGTCCAATCG 59.311 57.143 0.00 0.00 0.00 3.34
299 300 0.106894 CTCCCCCTTAGTCCAATCGC 59.893 60.000 0.00 0.00 0.00 4.58
300 301 0.619255 TCCCCCTTAGTCCAATCGCA 60.619 55.000 0.00 0.00 0.00 5.10
301 302 0.254747 CCCCCTTAGTCCAATCGCAA 59.745 55.000 0.00 0.00 0.00 4.85
302 303 1.133792 CCCCCTTAGTCCAATCGCAAT 60.134 52.381 0.00 0.00 0.00 3.56
303 304 2.654863 CCCCTTAGTCCAATCGCAATT 58.345 47.619 0.00 0.00 0.00 2.32
304 305 3.023832 CCCCTTAGTCCAATCGCAATTT 58.976 45.455 0.00 0.00 0.00 1.82
305 306 3.181487 CCCCTTAGTCCAATCGCAATTTG 60.181 47.826 0.00 0.00 0.00 2.32
306 307 3.438360 CCTTAGTCCAATCGCAATTTGC 58.562 45.455 11.42 11.42 40.69 3.68
307 308 3.438360 CTTAGTCCAATCGCAATTTGCC 58.562 45.455 15.45 0.00 41.12 4.52
308 309 1.255882 AGTCCAATCGCAATTTGCCA 58.744 45.000 15.45 3.22 41.12 4.92
309 310 1.617850 AGTCCAATCGCAATTTGCCAA 59.382 42.857 15.45 4.80 41.12 4.52
310 311 1.726248 GTCCAATCGCAATTTGCCAAC 59.274 47.619 15.45 2.11 41.12 3.77
311 312 1.617850 TCCAATCGCAATTTGCCAACT 59.382 42.857 15.45 0.00 41.12 3.16
312 313 1.994779 CCAATCGCAATTTGCCAACTC 59.005 47.619 15.45 0.00 41.12 3.01
313 314 2.609984 CCAATCGCAATTTGCCAACTCA 60.610 45.455 15.45 0.00 41.12 3.41
314 315 3.058450 CAATCGCAATTTGCCAACTCAA 58.942 40.909 15.45 0.00 41.12 3.02
315 316 2.879002 TCGCAATTTGCCAACTCAAA 57.121 40.000 15.45 0.00 41.12 2.69
316 317 3.170791 TCGCAATTTGCCAACTCAAAA 57.829 38.095 15.45 0.00 41.12 2.44
317 318 3.525537 TCGCAATTTGCCAACTCAAAAA 58.474 36.364 15.45 0.00 41.12 1.94
318 319 3.308323 TCGCAATTTGCCAACTCAAAAAC 59.692 39.130 15.45 0.00 41.12 2.43
319 320 3.063180 CGCAATTTGCCAACTCAAAAACA 59.937 39.130 15.45 0.00 41.12 2.83
320 321 4.341935 GCAATTTGCCAACTCAAAAACAC 58.658 39.130 10.34 0.00 39.13 3.32
321 322 4.730324 GCAATTTGCCAACTCAAAAACACC 60.730 41.667 10.34 0.00 39.13 4.16
322 323 2.682155 TTGCCAACTCAAAAACACCC 57.318 45.000 0.00 0.00 0.00 4.61
323 324 0.827368 TGCCAACTCAAAAACACCCC 59.173 50.000 0.00 0.00 0.00 4.95
324 325 0.249280 GCCAACTCAAAAACACCCCG 60.249 55.000 0.00 0.00 0.00 5.73
325 326 1.107945 CCAACTCAAAAACACCCCGT 58.892 50.000 0.00 0.00 0.00 5.28
326 327 2.299521 CCAACTCAAAAACACCCCGTA 58.700 47.619 0.00 0.00 0.00 4.02
327 328 2.688958 CCAACTCAAAAACACCCCGTAA 59.311 45.455 0.00 0.00 0.00 3.18
328 329 3.243267 CCAACTCAAAAACACCCCGTAAG 60.243 47.826 0.00 0.00 0.00 2.34
329 330 3.564053 ACTCAAAAACACCCCGTAAGA 57.436 42.857 0.00 0.00 43.02 2.10
330 331 3.208594 ACTCAAAAACACCCCGTAAGAC 58.791 45.455 0.00 0.00 43.02 3.01
331 332 3.207778 CTCAAAAACACCCCGTAAGACA 58.792 45.455 0.00 0.00 43.02 3.41
332 333 2.944349 TCAAAAACACCCCGTAAGACAC 59.056 45.455 0.00 0.00 43.02 3.67
333 334 1.971481 AAAACACCCCGTAAGACACC 58.029 50.000 0.00 0.00 43.02 4.16
334 335 0.109153 AAACACCCCGTAAGACACCC 59.891 55.000 0.00 0.00 43.02 4.61
335 336 2.103339 AACACCCCGTAAGACACCCG 62.103 60.000 0.00 0.00 43.02 5.28
336 337 2.203684 ACCCCGTAAGACACCCGT 60.204 61.111 0.00 0.00 43.02 5.28
337 338 1.076549 ACCCCGTAAGACACCCGTA 59.923 57.895 0.00 0.00 43.02 4.02
338 339 0.541764 ACCCCGTAAGACACCCGTAA 60.542 55.000 0.00 0.00 43.02 3.18
339 340 0.607620 CCCCGTAAGACACCCGTAAA 59.392 55.000 0.00 0.00 43.02 2.01
340 341 1.404583 CCCCGTAAGACACCCGTAAAG 60.405 57.143 0.00 0.00 43.02 1.85
341 342 1.273327 CCCGTAAGACACCCGTAAAGT 59.727 52.381 0.00 0.00 43.02 2.66
342 343 2.289010 CCCGTAAGACACCCGTAAAGTT 60.289 50.000 0.00 0.00 43.02 2.66
343 344 2.989166 CCGTAAGACACCCGTAAAGTTC 59.011 50.000 0.00 0.00 43.02 3.01
344 345 2.989166 CGTAAGACACCCGTAAAGTTCC 59.011 50.000 0.00 0.00 43.02 3.62
345 346 2.159327 AAGACACCCGTAAAGTTCCG 57.841 50.000 0.00 0.00 0.00 4.30
346 347 1.043022 AGACACCCGTAAAGTTCCGT 58.957 50.000 0.00 0.00 0.00 4.69
347 348 1.413812 AGACACCCGTAAAGTTCCGTT 59.586 47.619 0.00 0.00 0.00 4.44
348 349 1.528161 GACACCCGTAAAGTTCCGTTG 59.472 52.381 0.00 0.00 0.00 4.10
349 350 1.138661 ACACCCGTAAAGTTCCGTTGA 59.861 47.619 0.00 0.00 0.00 3.18
350 351 2.224354 ACACCCGTAAAGTTCCGTTGAT 60.224 45.455 0.00 0.00 0.00 2.57
351 352 2.158841 CACCCGTAAAGTTCCGTTGATG 59.841 50.000 0.00 0.00 0.00 3.07
352 353 2.224354 ACCCGTAAAGTTCCGTTGATGT 60.224 45.455 0.00 0.00 0.00 3.06
353 354 3.006752 ACCCGTAAAGTTCCGTTGATGTA 59.993 43.478 0.00 0.00 0.00 2.29
354 355 3.615496 CCCGTAAAGTTCCGTTGATGTAG 59.385 47.826 0.00 0.00 0.00 2.74
355 356 3.061697 CCGTAAAGTTCCGTTGATGTAGC 59.938 47.826 0.00 0.00 0.00 3.58
356 357 3.676172 CGTAAAGTTCCGTTGATGTAGCA 59.324 43.478 0.00 0.00 0.00 3.49
357 358 4.328983 CGTAAAGTTCCGTTGATGTAGCAT 59.671 41.667 0.00 0.00 0.00 3.79
358 359 5.163893 CGTAAAGTTCCGTTGATGTAGCATT 60.164 40.000 0.00 0.00 0.00 3.56
359 360 4.685169 AAGTTCCGTTGATGTAGCATTG 57.315 40.909 0.00 0.00 0.00 2.82
360 361 2.420022 AGTTCCGTTGATGTAGCATTGC 59.580 45.455 0.00 0.00 0.00 3.56
361 362 2.401583 TCCGTTGATGTAGCATTGCT 57.598 45.000 16.63 16.63 43.41 3.91
362 363 2.279741 TCCGTTGATGTAGCATTGCTC 58.720 47.619 15.81 7.72 40.44 4.26
363 364 1.004610 CCGTTGATGTAGCATTGCTCG 60.005 52.381 15.81 10.35 40.44 5.03
364 365 1.660607 CGTTGATGTAGCATTGCTCGT 59.339 47.619 15.81 8.35 40.44 4.18
365 366 2.535534 CGTTGATGTAGCATTGCTCGTG 60.536 50.000 15.81 0.00 40.44 4.35
366 367 2.385013 TGATGTAGCATTGCTCGTGT 57.615 45.000 15.81 0.00 40.44 4.49
367 368 3.518634 TGATGTAGCATTGCTCGTGTA 57.481 42.857 15.81 0.00 40.44 2.90
368 369 3.855858 TGATGTAGCATTGCTCGTGTAA 58.144 40.909 15.81 0.00 40.44 2.41
369 370 4.249661 TGATGTAGCATTGCTCGTGTAAA 58.750 39.130 15.81 0.00 40.44 2.01
370 371 4.875536 TGATGTAGCATTGCTCGTGTAAAT 59.124 37.500 15.81 0.00 40.44 1.40
371 372 6.045955 TGATGTAGCATTGCTCGTGTAAATA 58.954 36.000 15.81 0.00 40.44 1.40
372 373 6.705825 TGATGTAGCATTGCTCGTGTAAATAT 59.294 34.615 15.81 0.00 40.44 1.28
373 374 7.870445 TGATGTAGCATTGCTCGTGTAAATATA 59.130 33.333 15.81 0.00 40.44 0.86
374 375 8.777865 ATGTAGCATTGCTCGTGTAAATATAT 57.222 30.769 15.81 0.00 40.44 0.86
375 376 9.869757 ATGTAGCATTGCTCGTGTAAATATATA 57.130 29.630 15.81 0.00 40.44 0.86
376 377 9.135843 TGTAGCATTGCTCGTGTAAATATATAC 57.864 33.333 15.81 3.03 40.44 1.47
377 378 7.278211 AGCATTGCTCGTGTAAATATATACG 57.722 36.000 5.03 0.25 44.90 3.06
378 379 5.952064 GCATTGCTCGTGTAAATATATACGC 59.048 40.000 0.16 0.00 43.70 4.42
379 380 6.400621 GCATTGCTCGTGTAAATATATACGCA 60.401 38.462 0.16 0.00 43.70 5.24
380 381 6.442487 TTGCTCGTGTAAATATATACGCAC 57.558 37.500 1.64 3.16 43.70 5.34
381 382 5.521544 TGCTCGTGTAAATATATACGCACA 58.478 37.500 11.46 5.79 43.70 4.57
382 383 5.978322 TGCTCGTGTAAATATATACGCACAA 59.022 36.000 11.46 0.00 43.70 3.33
383 384 6.476053 TGCTCGTGTAAATATATACGCACAAA 59.524 34.615 11.46 2.35 43.70 2.83
384 385 7.170151 TGCTCGTGTAAATATATACGCACAAAT 59.830 33.333 11.46 0.00 43.70 2.32
385 386 8.641155 GCTCGTGTAAATATATACGCACAAATA 58.359 33.333 11.46 0.00 43.70 1.40
386 387 9.933175 CTCGTGTAAATATATACGCACAAATAC 57.067 33.333 11.46 0.00 43.70 1.89
387 388 9.681692 TCGTGTAAATATATACGCACAAATACT 57.318 29.630 11.46 0.00 43.70 2.12
398 399 6.287107 ACGCACAAATACTACTCATTATGC 57.713 37.500 0.00 0.00 0.00 3.14
399 400 5.236478 ACGCACAAATACTACTCATTATGCC 59.764 40.000 0.00 0.00 29.85 4.40
400 401 5.612492 CGCACAAATACTACTCATTATGCCG 60.612 44.000 0.00 0.00 29.85 5.69
437 438 1.525995 CCGGGCTCACAGTGTTGTT 60.526 57.895 0.00 0.00 34.62 2.83
445 446 3.181504 GCTCACAGTGTTGTTTAAACGGT 60.182 43.478 13.45 2.57 34.62 4.83
446 447 4.034279 GCTCACAGTGTTGTTTAAACGGTA 59.966 41.667 13.45 0.00 34.62 4.02
467 468 3.223661 GCCTGATTCGGCCTAGATG 57.776 57.895 0.00 0.00 44.41 2.90
478 479 2.738846 CGGCCTAGATGAACATGTATGC 59.261 50.000 0.00 9.44 30.95 3.14
489 490 8.242053 AGATGAACATGTATGCTTCTCTTTTTG 58.758 33.333 0.00 0.00 0.00 2.44
513 514 8.880878 TGCTTTATTCCTAAAGTTTCCAAAAC 57.119 30.769 0.00 0.00 43.81 2.43
593 602 5.682212 GCTTTCTCCAATGACACCACTTTTT 60.682 40.000 0.00 0.00 0.00 1.94
699 708 0.100861 GGTTCGTTGCGGTTGGAAAA 59.899 50.000 0.00 0.00 0.00 2.29
700 709 1.269361 GGTTCGTTGCGGTTGGAAAAT 60.269 47.619 0.00 0.00 0.00 1.82
701 710 2.030981 GGTTCGTTGCGGTTGGAAAATA 60.031 45.455 0.00 0.00 0.00 1.40
702 711 3.366577 GGTTCGTTGCGGTTGGAAAATAT 60.367 43.478 0.00 0.00 0.00 1.28
703 712 4.231439 GTTCGTTGCGGTTGGAAAATATT 58.769 39.130 0.00 0.00 0.00 1.28
704 713 3.827625 TCGTTGCGGTTGGAAAATATTG 58.172 40.909 0.00 0.00 0.00 1.90
705 714 3.253677 TCGTTGCGGTTGGAAAATATTGT 59.746 39.130 0.00 0.00 0.00 2.71
706 715 4.454847 TCGTTGCGGTTGGAAAATATTGTA 59.545 37.500 0.00 0.00 0.00 2.41
707 716 4.555747 CGTTGCGGTTGGAAAATATTGTAC 59.444 41.667 0.00 0.00 0.00 2.90
708 717 5.618195 CGTTGCGGTTGGAAAATATTGTACT 60.618 40.000 0.00 0.00 0.00 2.73
709 718 5.554822 TGCGGTTGGAAAATATTGTACTC 57.445 39.130 0.00 0.00 0.00 2.59
710 719 4.396790 TGCGGTTGGAAAATATTGTACTCC 59.603 41.667 0.00 0.00 0.00 3.85
714 723 7.543756 CGGTTGGAAAATATTGTACTCCATTT 58.456 34.615 8.75 0.00 36.12 2.32
716 725 9.150348 GGTTGGAAAATATTGTACTCCATTTTG 57.850 33.333 13.14 0.00 36.12 2.44
787 847 8.429641 TGATTTATGGGAGTAGTTATCAGGAAC 58.570 37.037 0.00 0.00 0.00 3.62
793 952 6.884295 TGGGAGTAGTTATCAGGAACAAATTG 59.116 38.462 0.00 0.00 0.00 2.32
886 1096 1.693103 CCTACCCCTCCCCACTTCC 60.693 68.421 0.00 0.00 0.00 3.46
938 1148 0.035534 CATTCCCATCACGACCACCA 60.036 55.000 0.00 0.00 0.00 4.17
950 1160 2.883730 CCACCATCACGTACGCGG 60.884 66.667 16.72 13.23 43.45 6.46
1105 1315 2.887151 AATCCAGGACAAGGAAGGTG 57.113 50.000 0.00 0.00 38.93 4.00
1142 1352 2.356818 CTTCGTCTCCCGGCTGATCC 62.357 65.000 0.00 0.00 37.11 3.36
1176 1387 2.257409 ATCACGGCCGCCATTTCTCT 62.257 55.000 28.58 0.00 0.00 3.10
1179 1390 2.830370 GGCCGCCATTTCTCTGGG 60.830 66.667 3.91 0.00 36.75 4.45
1189 1400 1.083489 TTTCTCTGGGCGCGTTTATG 58.917 50.000 8.43 0.00 0.00 1.90
1197 1409 1.542272 GGCGCGTTTATGCATGCATG 61.542 55.000 37.43 23.93 37.82 4.06
1216 1428 2.694213 TGTGCTTTGCGCTGAATACTA 58.306 42.857 9.73 0.00 40.03 1.82
1217 1429 2.415168 TGTGCTTTGCGCTGAATACTAC 59.585 45.455 9.73 0.00 40.03 2.73
1488 1700 1.236616 CCACTGCCGTGCAATTGAGA 61.237 55.000 10.34 0.00 38.41 3.27
1495 1720 1.596220 CCGTGCAATTGAGATCATGCG 60.596 52.381 10.34 0.00 41.61 4.73
1540 4436 3.398954 TGTTGCTGTGTTTTCTTCGAC 57.601 42.857 0.00 0.00 0.00 4.20
1655 4551 5.706833 TCAACTTATCATGTGTGTTGATGCT 59.293 36.000 16.08 0.00 41.02 3.79
1674 4570 7.330262 TGATGCTTTGATCTGATGTACTGTAA 58.670 34.615 0.00 0.00 0.00 2.41
1676 4572 7.543947 TGCTTTGATCTGATGTACTGTAATG 57.456 36.000 0.00 0.00 0.00 1.90
1678 4574 7.823799 TGCTTTGATCTGATGTACTGTAATGAA 59.176 33.333 0.00 0.00 0.00 2.57
1716 4612 4.298744 AGAAGAAGTTTGTTTGAGCAGC 57.701 40.909 0.00 0.00 0.00 5.25
1830 4726 5.038683 CCGTGTCAGGGTTTTAAGTTTTTC 58.961 41.667 3.24 0.00 0.00 2.29
1833 4729 6.809689 CGTGTCAGGGTTTTAAGTTTTTCTTT 59.190 34.615 0.00 0.00 37.56 2.52
1834 4730 7.329962 CGTGTCAGGGTTTTAAGTTTTTCTTTT 59.670 33.333 0.00 0.00 37.56 2.27
1835 4731 8.995220 GTGTCAGGGTTTTAAGTTTTTCTTTTT 58.005 29.630 0.00 0.00 37.56 1.94
1836 4732 9.210329 TGTCAGGGTTTTAAGTTTTTCTTTTTC 57.790 29.630 0.00 0.00 37.56 2.29
1837 4733 9.431887 GTCAGGGTTTTAAGTTTTTCTTTTTCT 57.568 29.630 0.00 0.00 37.56 2.52
1880 4776 5.221561 TGAGGGTTTTAAGTTGAGTCGATCA 60.222 40.000 0.00 0.00 35.62 2.92
1886 4782 8.381387 GGTTTTAAGTTGAGTCGATCATTAGTC 58.619 37.037 0.00 0.00 37.89 2.59
1902 4798 9.979578 GATCATTAGTCTCATAGTCAAGTTCAT 57.020 33.333 0.00 0.00 0.00 2.57
1939 4836 8.980481 ATGTCAGTCCGGATATTTTAATCTTT 57.020 30.769 7.81 0.00 0.00 2.52
1944 4841 7.645340 CAGTCCGGATATTTTAATCTTTGCAAG 59.355 37.037 7.81 0.00 0.00 4.01
1948 4845 6.418819 CGGATATTTTAATCTTTGCAAGCTGG 59.581 38.462 0.00 0.00 0.00 4.85
1954 4851 6.843069 TTAATCTTTGCAAGCTGGTTTTTC 57.157 33.333 0.00 0.00 0.00 2.29
1956 4853 2.765699 TCTTTGCAAGCTGGTTTTTCCT 59.234 40.909 0.00 0.00 37.07 3.36
1958 4855 2.888834 TGCAAGCTGGTTTTTCCTTC 57.111 45.000 0.00 0.00 37.07 3.46
1962 4859 3.432186 GCAAGCTGGTTTTTCCTTCCTTT 60.432 43.478 0.00 0.00 37.07 3.11
1964 4861 4.672587 AGCTGGTTTTTCCTTCCTTTTC 57.327 40.909 0.00 0.00 37.07 2.29
1965 4862 4.030216 AGCTGGTTTTTCCTTCCTTTTCA 58.970 39.130 0.00 0.00 37.07 2.69
2001 4899 3.411446 TCATTCACCTTCTGACGCAATT 58.589 40.909 0.00 0.00 0.00 2.32
2009 4907 3.346631 CTGACGCAATTGGCCTGCC 62.347 63.158 3.32 0.00 40.31 4.85
2027 4925 2.034053 TGCCACAACAAAATCCGAGTTC 59.966 45.455 0.00 0.00 0.00 3.01
2028 4926 2.916111 CCACAACAAAATCCGAGTTCG 58.084 47.619 0.00 0.00 39.44 3.95
2040 4938 4.288670 TCCGAGTTCGATTGAGATGTAC 57.711 45.455 2.59 0.00 43.02 2.90
2041 4939 3.945921 TCCGAGTTCGATTGAGATGTACT 59.054 43.478 2.59 0.00 43.02 2.73
2042 4940 5.121105 TCCGAGTTCGATTGAGATGTACTA 58.879 41.667 2.59 0.00 43.02 1.82
2043 4941 5.007430 TCCGAGTTCGATTGAGATGTACTAC 59.993 44.000 2.59 0.00 43.02 2.73
2044 4942 5.007823 CCGAGTTCGATTGAGATGTACTACT 59.992 44.000 2.59 0.00 43.02 2.57
2098 7301 6.636454 TTCAATGGAAGGTAGGTCAACTAT 57.364 37.500 0.00 0.00 33.43 2.12
2099 7302 5.989477 TCAATGGAAGGTAGGTCAACTATG 58.011 41.667 0.00 0.00 33.43 2.23
2104 7358 5.163447 TGGAAGGTAGGTCAACTATGAATCG 60.163 44.000 0.00 0.00 37.30 3.34
2130 7384 5.128499 TCAAAATTGACTTTGGGCTCTTTGA 59.872 36.000 0.00 0.00 37.00 2.69
2185 7440 1.298953 AGGCTAGCAAATGGAGGGAA 58.701 50.000 18.24 0.00 0.00 3.97
2244 7500 1.093972 TGATATGTGGCAAGCCGTTG 58.906 50.000 6.60 0.00 39.42 4.10
2272 7528 4.400251 GCAATCTTCATGATTTGGAGGTGA 59.600 41.667 0.00 0.00 43.00 4.02
2273 7529 5.450137 GCAATCTTCATGATTTGGAGGTGAG 60.450 44.000 0.00 0.00 43.00 3.51
2274 7530 5.705397 ATCTTCATGATTTGGAGGTGAGA 57.295 39.130 0.00 0.00 31.05 3.27
2275 7531 5.503634 TCTTCATGATTTGGAGGTGAGAA 57.496 39.130 0.00 0.00 31.05 2.87
2276 7532 5.248640 TCTTCATGATTTGGAGGTGAGAAC 58.751 41.667 0.00 0.00 31.05 3.01
2277 7533 4.639078 TCATGATTTGGAGGTGAGAACA 57.361 40.909 0.00 0.00 0.00 3.18
2278 7534 4.326826 TCATGATTTGGAGGTGAGAACAC 58.673 43.478 0.00 0.00 45.27 3.32
2280 7536 1.464997 GATTTGGAGGTGAGAACACGC 59.535 52.381 0.00 0.00 46.77 5.34
2283 7539 0.179234 TGGAGGTGAGAACACGCAAA 59.821 50.000 0.00 0.00 46.77 3.68
2339 7613 9.177304 GAACATATCAACATACAAGATGCAATG 57.823 33.333 0.00 0.00 0.00 2.82
2348 7622 4.644103 ACAAGATGCAATGCAAGATACC 57.356 40.909 13.45 0.00 43.62 2.73
2360 7634 6.798427 ATGCAAGATACCCGTAGATCATAT 57.202 37.500 0.00 0.00 0.00 1.78
2371 7645 6.158871 ACCCGTAGATCATATGAGATAGAGGA 59.841 42.308 11.78 0.00 0.00 3.71
2422 7696 1.428912 ACAAGGAGGGCTTGAATTCCA 59.571 47.619 2.27 0.00 35.88 3.53
2424 7698 2.429610 CAAGGAGGGCTTGAATTCCATG 59.570 50.000 2.27 0.00 33.98 3.66
2425 7699 1.063417 AGGAGGGCTTGAATTCCATGG 60.063 52.381 4.97 4.97 32.02 3.66
2426 7700 1.342374 GGAGGGCTTGAATTCCATGGT 60.342 52.381 12.58 0.00 0.00 3.55
2427 7701 1.753073 GAGGGCTTGAATTCCATGGTG 59.247 52.381 12.58 0.00 0.00 4.17
2488 7788 2.276740 CCATGAGGAGCAACCCCC 59.723 66.667 0.00 0.00 40.05 5.40
2492 7792 1.215173 CATGAGGAGCAACCCCCAATA 59.785 52.381 0.00 0.00 40.05 1.90
2495 7795 1.141858 GAGGAGCAACCCCCAATAGAG 59.858 57.143 0.00 0.00 40.05 2.43
2499 7799 3.138468 GGAGCAACCCCCAATAGAGTAAT 59.862 47.826 0.00 0.00 0.00 1.89
2508 7808 5.403512 CCCCAATAGAGTAATCCCACTAGA 58.596 45.833 0.00 0.00 0.00 2.43
2570 7870 5.278061 TCTAGTCTTGGCTAACCCTACATT 58.722 41.667 0.00 0.00 33.59 2.71
2600 7900 6.621514 AGGGGGAAATATATAGATCCATCCAC 59.378 42.308 19.18 5.35 33.48 4.02
2618 7921 0.321996 ACGAAGGAAGTGAGGAAGGC 59.678 55.000 0.00 0.00 0.00 4.35
2622 7925 3.425659 GAAGGAAGTGAGGAAGGCAAAT 58.574 45.455 0.00 0.00 0.00 2.32
2635 7938 6.904626 AGGAAGGCAAATATAGATGAGTTGT 58.095 36.000 0.00 0.00 0.00 3.32
2636 7939 6.995091 AGGAAGGCAAATATAGATGAGTTGTC 59.005 38.462 0.00 0.00 0.00 3.18
2640 7943 4.452455 GCAAATATAGATGAGTTGTCCCCG 59.548 45.833 0.00 0.00 0.00 5.73
2650 7953 1.153353 GTTGTCCCCGTACATGTGTG 58.847 55.000 9.11 0.00 0.00 3.82
2664 7967 0.599558 TGTGTGTGTAGGTAGGTCGC 59.400 55.000 0.00 0.00 0.00 5.19
2708 8011 1.727467 CGGGCAATCGGAACAATCC 59.273 57.895 0.00 0.00 42.80 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.922447 ACCCTGATTCCCTATGTGCAA 59.078 47.619 0.00 0.00 0.00 4.08
1 2 1.595311 ACCCTGATTCCCTATGTGCA 58.405 50.000 0.00 0.00 0.00 4.57
2 3 2.173569 AGAACCCTGATTCCCTATGTGC 59.826 50.000 0.00 0.00 0.00 4.57
3 4 3.455910 TGAGAACCCTGATTCCCTATGTG 59.544 47.826 0.00 0.00 0.00 3.21
4 5 3.736094 TGAGAACCCTGATTCCCTATGT 58.264 45.455 0.00 0.00 0.00 2.29
5 6 4.778213 TTGAGAACCCTGATTCCCTATG 57.222 45.455 0.00 0.00 0.00 2.23
6 7 6.466470 GCTTATTGAGAACCCTGATTCCCTAT 60.466 42.308 0.00 0.00 0.00 2.57
7 8 5.163195 GCTTATTGAGAACCCTGATTCCCTA 60.163 44.000 0.00 0.00 0.00 3.53
8 9 4.385754 GCTTATTGAGAACCCTGATTCCCT 60.386 45.833 0.00 0.00 0.00 4.20
9 10 3.885901 GCTTATTGAGAACCCTGATTCCC 59.114 47.826 0.00 0.00 0.00 3.97
10 11 3.885901 GGCTTATTGAGAACCCTGATTCC 59.114 47.826 0.00 0.00 0.00 3.01
11 12 3.561725 CGGCTTATTGAGAACCCTGATTC 59.438 47.826 0.00 0.00 0.00 2.52
12 13 3.054361 ACGGCTTATTGAGAACCCTGATT 60.054 43.478 0.00 0.00 0.00 2.57
13 14 2.505819 ACGGCTTATTGAGAACCCTGAT 59.494 45.455 0.00 0.00 0.00 2.90
14 15 1.906574 ACGGCTTATTGAGAACCCTGA 59.093 47.619 0.00 0.00 0.00 3.86
15 16 2.280628 GACGGCTTATTGAGAACCCTG 58.719 52.381 0.00 0.00 0.00 4.45
16 17 1.906574 TGACGGCTTATTGAGAACCCT 59.093 47.619 0.00 0.00 0.00 4.34
17 18 2.396590 TGACGGCTTATTGAGAACCC 57.603 50.000 0.00 0.00 0.00 4.11
18 19 2.032178 GCATGACGGCTTATTGAGAACC 59.968 50.000 0.00 0.00 0.00 3.62
19 20 2.939103 AGCATGACGGCTTATTGAGAAC 59.061 45.455 0.00 0.00 42.71 3.01
20 21 3.266510 AGCATGACGGCTTATTGAGAA 57.733 42.857 0.00 0.00 42.71 2.87
21 22 2.988010 AGCATGACGGCTTATTGAGA 57.012 45.000 0.00 0.00 42.71 3.27
30 31 2.090524 GCAAAGCAAGCATGACGGC 61.091 57.895 0.00 0.00 0.00 5.68
31 32 1.444895 GGCAAAGCAAGCATGACGG 60.445 57.895 0.00 0.00 0.00 4.79
32 33 0.318869 TTGGCAAAGCAAGCATGACG 60.319 50.000 0.00 0.00 0.00 4.35
33 34 1.868469 TTTGGCAAAGCAAGCATGAC 58.132 45.000 8.93 0.00 0.00 3.06
34 35 2.158928 ACTTTTGGCAAAGCAAGCATGA 60.159 40.909 13.04 0.00 43.03 3.07
35 36 2.032377 CACTTTTGGCAAAGCAAGCATG 60.032 45.455 13.04 0.31 43.03 4.06
36 37 2.215196 CACTTTTGGCAAAGCAAGCAT 58.785 42.857 13.04 0.00 43.03 3.79
37 38 1.654317 CACTTTTGGCAAAGCAAGCA 58.346 45.000 13.04 0.00 43.03 3.91
38 39 0.305617 GCACTTTTGGCAAAGCAAGC 59.694 50.000 13.04 11.90 43.03 4.01
48 49 6.314896 TCATTGTTTTAACTTGGCACTTTTGG 59.685 34.615 0.00 0.00 0.00 3.28
49 50 7.301068 TCATTGTTTTAACTTGGCACTTTTG 57.699 32.000 0.00 0.00 0.00 2.44
50 51 7.913674 TTCATTGTTTTAACTTGGCACTTTT 57.086 28.000 0.00 0.00 0.00 2.27
51 52 7.552330 ACATTCATTGTTTTAACTTGGCACTTT 59.448 29.630 0.00 0.00 33.74 2.66
52 53 7.047271 ACATTCATTGTTTTAACTTGGCACTT 58.953 30.769 0.00 0.00 33.74 3.16
53 54 6.581712 ACATTCATTGTTTTAACTTGGCACT 58.418 32.000 0.00 0.00 33.74 4.40
54 55 6.701400 AGACATTCATTGTTTTAACTTGGCAC 59.299 34.615 0.00 0.00 39.18 5.01
55 56 6.815089 AGACATTCATTGTTTTAACTTGGCA 58.185 32.000 0.00 0.00 39.18 4.92
56 57 6.088085 CGAGACATTCATTGTTTTAACTTGGC 59.912 38.462 0.00 0.00 39.18 4.52
57 58 7.359595 TCGAGACATTCATTGTTTTAACTTGG 58.640 34.615 0.00 0.00 39.18 3.61
58 59 8.781067 TTCGAGACATTCATTGTTTTAACTTG 57.219 30.769 0.00 0.00 39.18 3.16
59 60 9.965824 ATTTCGAGACATTCATTGTTTTAACTT 57.034 25.926 0.00 0.00 39.18 2.66
60 61 9.612620 GATTTCGAGACATTCATTGTTTTAACT 57.387 29.630 0.00 0.00 39.18 2.24
61 62 8.850452 GGATTTCGAGACATTCATTGTTTTAAC 58.150 33.333 0.00 0.00 39.18 2.01
62 63 8.026607 GGGATTTCGAGACATTCATTGTTTTAA 58.973 33.333 0.00 0.00 39.18 1.52
63 64 7.175816 TGGGATTTCGAGACATTCATTGTTTTA 59.824 33.333 0.00 0.00 39.18 1.52
64 65 6.015519 TGGGATTTCGAGACATTCATTGTTTT 60.016 34.615 0.00 0.00 39.18 2.43
65 66 5.476599 TGGGATTTCGAGACATTCATTGTTT 59.523 36.000 0.00 0.00 39.18 2.83
66 67 5.009631 TGGGATTTCGAGACATTCATTGTT 58.990 37.500 0.00 0.00 39.18 2.83
67 68 4.588899 TGGGATTTCGAGACATTCATTGT 58.411 39.130 0.00 0.00 42.79 2.71
68 69 5.762825 ATGGGATTTCGAGACATTCATTG 57.237 39.130 0.00 0.00 0.00 2.82
69 70 5.300286 GGAATGGGATTTCGAGACATTCATT 59.700 40.000 20.60 13.01 45.55 2.57
70 71 4.823989 GGAATGGGATTTCGAGACATTCAT 59.176 41.667 20.60 7.33 45.55 2.57
71 72 4.080356 AGGAATGGGATTTCGAGACATTCA 60.080 41.667 20.60 5.78 45.55 2.57
72 73 4.455606 AGGAATGGGATTTCGAGACATTC 58.544 43.478 15.26 15.26 43.96 2.67
73 74 4.455606 GAGGAATGGGATTTCGAGACATT 58.544 43.478 0.00 0.00 34.73 2.71
74 75 3.181450 GGAGGAATGGGATTTCGAGACAT 60.181 47.826 0.00 0.00 0.00 3.06
75 76 2.170607 GGAGGAATGGGATTTCGAGACA 59.829 50.000 0.00 0.00 0.00 3.41
76 77 2.436173 AGGAGGAATGGGATTTCGAGAC 59.564 50.000 0.00 0.00 0.00 3.36
77 78 2.764269 AGGAGGAATGGGATTTCGAGA 58.236 47.619 0.00 0.00 0.00 4.04
78 79 3.567478 AAGGAGGAATGGGATTTCGAG 57.433 47.619 0.00 0.00 0.00 4.04
79 80 4.473559 AGTAAAGGAGGAATGGGATTTCGA 59.526 41.667 0.00 0.00 0.00 3.71
80 81 4.781934 AGTAAAGGAGGAATGGGATTTCG 58.218 43.478 0.00 0.00 0.00 3.46
81 82 6.007485 AGAGTAAAGGAGGAATGGGATTTC 57.993 41.667 0.00 0.00 0.00 2.17
82 83 6.408770 AAGAGTAAAGGAGGAATGGGATTT 57.591 37.500 0.00 0.00 0.00 2.17
83 84 6.101881 CCTAAGAGTAAAGGAGGAATGGGATT 59.898 42.308 0.00 0.00 34.58 3.01
84 85 5.608860 CCTAAGAGTAAAGGAGGAATGGGAT 59.391 44.000 0.00 0.00 34.58 3.85
85 86 4.969359 CCTAAGAGTAAAGGAGGAATGGGA 59.031 45.833 0.00 0.00 34.58 4.37
86 87 4.722279 ACCTAAGAGTAAAGGAGGAATGGG 59.278 45.833 0.00 0.00 36.66 4.00
87 88 5.959583 ACCTAAGAGTAAAGGAGGAATGG 57.040 43.478 0.00 0.00 36.66 3.16
88 89 6.931840 GCATACCTAAGAGTAAAGGAGGAATG 59.068 42.308 0.00 0.00 36.66 2.67
89 90 6.615726 TGCATACCTAAGAGTAAAGGAGGAAT 59.384 38.462 0.00 0.00 36.66 3.01
90 91 5.962031 TGCATACCTAAGAGTAAAGGAGGAA 59.038 40.000 0.00 0.00 36.66 3.36
91 92 5.363005 GTGCATACCTAAGAGTAAAGGAGGA 59.637 44.000 0.00 0.00 36.66 3.71
92 93 5.128827 TGTGCATACCTAAGAGTAAAGGAGG 59.871 44.000 0.00 0.00 36.66 4.30
93 94 6.222038 TGTGCATACCTAAGAGTAAAGGAG 57.778 41.667 0.00 0.00 36.66 3.69
94 95 6.611642 AGATGTGCATACCTAAGAGTAAAGGA 59.388 38.462 0.00 0.00 36.66 3.36
95 96 6.821388 AGATGTGCATACCTAAGAGTAAAGG 58.179 40.000 0.00 0.00 38.93 3.11
96 97 7.439655 GGAAGATGTGCATACCTAAGAGTAAAG 59.560 40.741 0.00 0.00 0.00 1.85
97 98 7.093068 TGGAAGATGTGCATACCTAAGAGTAAA 60.093 37.037 0.00 0.00 0.00 2.01
98 99 6.382859 TGGAAGATGTGCATACCTAAGAGTAA 59.617 38.462 0.00 0.00 0.00 2.24
99 100 5.897250 TGGAAGATGTGCATACCTAAGAGTA 59.103 40.000 0.00 0.00 0.00 2.59
100 101 4.716784 TGGAAGATGTGCATACCTAAGAGT 59.283 41.667 0.00 0.00 0.00 3.24
101 102 5.053145 GTGGAAGATGTGCATACCTAAGAG 58.947 45.833 0.00 0.00 0.00 2.85
102 103 4.141711 GGTGGAAGATGTGCATACCTAAGA 60.142 45.833 0.00 0.00 0.00 2.10
103 104 4.130118 GGTGGAAGATGTGCATACCTAAG 58.870 47.826 0.00 0.00 0.00 2.18
104 105 3.521531 TGGTGGAAGATGTGCATACCTAA 59.478 43.478 0.00 0.00 0.00 2.69
105 106 3.111484 TGGTGGAAGATGTGCATACCTA 58.889 45.455 0.00 0.00 0.00 3.08
106 107 1.915489 TGGTGGAAGATGTGCATACCT 59.085 47.619 0.00 0.00 0.00 3.08
107 108 2.017049 GTGGTGGAAGATGTGCATACC 58.983 52.381 0.00 0.00 0.00 2.73
108 109 2.420022 GTGTGGTGGAAGATGTGCATAC 59.580 50.000 0.00 0.00 0.00 2.39
109 110 2.039613 TGTGTGGTGGAAGATGTGCATA 59.960 45.455 0.00 0.00 0.00 3.14
110 111 1.202915 TGTGTGGTGGAAGATGTGCAT 60.203 47.619 0.00 0.00 0.00 3.96
111 112 0.182299 TGTGTGGTGGAAGATGTGCA 59.818 50.000 0.00 0.00 0.00 4.57
112 113 1.317613 TTGTGTGGTGGAAGATGTGC 58.682 50.000 0.00 0.00 0.00 4.57
113 114 2.951642 AGTTTGTGTGGTGGAAGATGTG 59.048 45.455 0.00 0.00 0.00 3.21
114 115 3.297134 AGTTTGTGTGGTGGAAGATGT 57.703 42.857 0.00 0.00 0.00 3.06
115 116 4.214119 CACTAGTTTGTGTGGTGGAAGATG 59.786 45.833 0.00 0.00 33.61 2.90
116 117 4.389374 CACTAGTTTGTGTGGTGGAAGAT 58.611 43.478 0.00 0.00 33.61 2.40
117 118 3.804036 CACTAGTTTGTGTGGTGGAAGA 58.196 45.455 0.00 0.00 33.61 2.87
118 119 2.290641 GCACTAGTTTGTGTGGTGGAAG 59.709 50.000 0.00 0.00 39.89 3.46
119 120 2.294074 GCACTAGTTTGTGTGGTGGAA 58.706 47.619 0.00 0.00 39.89 3.53
120 121 1.210722 TGCACTAGTTTGTGTGGTGGA 59.789 47.619 0.00 0.00 39.89 4.02
121 122 1.674359 TGCACTAGTTTGTGTGGTGG 58.326 50.000 0.00 0.00 39.89 4.61
122 123 3.565482 AGAATGCACTAGTTTGTGTGGTG 59.435 43.478 0.00 0.00 39.89 4.17
123 124 3.815401 GAGAATGCACTAGTTTGTGTGGT 59.185 43.478 0.00 0.00 39.89 4.16
124 125 4.067896 AGAGAATGCACTAGTTTGTGTGG 58.932 43.478 0.00 0.00 39.89 4.17
125 126 5.008019 ACAAGAGAATGCACTAGTTTGTGTG 59.992 40.000 4.87 0.00 39.89 3.82
126 127 5.008019 CACAAGAGAATGCACTAGTTTGTGT 59.992 40.000 18.31 4.28 39.89 3.72
127 128 5.008019 ACACAAGAGAATGCACTAGTTTGTG 59.992 40.000 22.26 22.26 40.62 3.33
128 129 5.008019 CACACAAGAGAATGCACTAGTTTGT 59.992 40.000 0.00 0.00 0.00 2.83
129 130 5.237127 TCACACAAGAGAATGCACTAGTTTG 59.763 40.000 0.00 0.00 0.00 2.93
130 131 5.368145 TCACACAAGAGAATGCACTAGTTT 58.632 37.500 0.00 0.00 0.00 2.66
131 132 4.960938 TCACACAAGAGAATGCACTAGTT 58.039 39.130 0.00 0.00 0.00 2.24
132 133 4.607293 TCACACAAGAGAATGCACTAGT 57.393 40.909 0.00 0.00 0.00 2.57
133 134 4.201792 GCATCACACAAGAGAATGCACTAG 60.202 45.833 0.00 0.00 34.12 2.57
134 135 3.686241 GCATCACACAAGAGAATGCACTA 59.314 43.478 0.00 0.00 34.12 2.74
135 136 2.486982 GCATCACACAAGAGAATGCACT 59.513 45.455 0.00 0.00 34.12 4.40
136 137 2.227149 TGCATCACACAAGAGAATGCAC 59.773 45.455 4.34 0.00 38.44 4.57
137 138 2.506444 TGCATCACACAAGAGAATGCA 58.494 42.857 4.34 4.34 40.64 3.96
138 139 3.128068 TGATGCATCACACAAGAGAATGC 59.872 43.478 25.42 0.00 0.00 3.56
139 140 4.957759 TGATGCATCACACAAGAGAATG 57.042 40.909 25.42 0.00 0.00 2.67
140 141 5.190677 TGATGATGCATCACACAAGAGAAT 58.809 37.500 30.92 11.58 44.60 2.40
141 142 4.581868 TGATGATGCATCACACAAGAGAA 58.418 39.130 30.92 4.97 44.60 2.87
142 143 4.210724 TGATGATGCATCACACAAGAGA 57.789 40.909 30.92 5.76 44.60 3.10
151 152 0.106569 GTGGGGGTGATGATGCATCA 60.107 55.000 30.47 30.47 46.84 3.07
152 153 0.825010 GGTGGGGGTGATGATGCATC 60.825 60.000 20.14 20.14 40.88 3.91
153 154 1.231068 GGTGGGGGTGATGATGCAT 59.769 57.895 0.00 0.00 0.00 3.96
154 155 1.798087 TTGGTGGGGGTGATGATGCA 61.798 55.000 0.00 0.00 0.00 3.96
155 156 0.614415 TTTGGTGGGGGTGATGATGC 60.614 55.000 0.00 0.00 0.00 3.91
156 157 1.935799 TTTTGGTGGGGGTGATGATG 58.064 50.000 0.00 0.00 0.00 3.07
157 158 2.256306 GTTTTTGGTGGGGGTGATGAT 58.744 47.619 0.00 0.00 0.00 2.45
158 159 1.710816 GTTTTTGGTGGGGGTGATGA 58.289 50.000 0.00 0.00 0.00 2.92
159 160 0.316841 CGTTTTTGGTGGGGGTGATG 59.683 55.000 0.00 0.00 0.00 3.07
160 161 0.186386 TCGTTTTTGGTGGGGGTGAT 59.814 50.000 0.00 0.00 0.00 3.06
161 162 0.466555 CTCGTTTTTGGTGGGGGTGA 60.467 55.000 0.00 0.00 0.00 4.02
162 163 0.466555 TCTCGTTTTTGGTGGGGGTG 60.467 55.000 0.00 0.00 0.00 4.61
163 164 0.179001 CTCTCGTTTTTGGTGGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
164 165 0.109723 TCTCTCGTTTTTGGTGGGGG 59.890 55.000 0.00 0.00 0.00 5.40
165 166 2.084546 GATCTCTCGTTTTTGGTGGGG 58.915 52.381 0.00 0.00 0.00 4.96
166 167 3.003480 GAGATCTCTCGTTTTTGGTGGG 58.997 50.000 15.80 0.00 32.78 4.61
167 168 3.664107 TGAGATCTCTCGTTTTTGGTGG 58.336 45.455 22.95 0.00 45.72 4.61
168 169 4.331168 GGATGAGATCTCTCGTTTTTGGTG 59.669 45.833 22.95 0.00 45.72 4.17
169 170 4.508662 GGATGAGATCTCTCGTTTTTGGT 58.491 43.478 22.95 0.00 45.72 3.67
170 171 3.553511 CGGATGAGATCTCTCGTTTTTGG 59.446 47.826 22.95 0.46 45.72 3.28
171 172 4.177026 ACGGATGAGATCTCTCGTTTTTG 58.823 43.478 22.95 7.78 45.72 2.44
172 173 4.457834 ACGGATGAGATCTCTCGTTTTT 57.542 40.909 22.95 6.52 45.72 1.94
173 174 5.578005 TTACGGATGAGATCTCTCGTTTT 57.422 39.130 29.12 16.28 45.72 2.43
174 175 5.776173 ATTACGGATGAGATCTCTCGTTT 57.224 39.130 29.12 20.09 45.72 3.60
175 176 5.533154 AGAATTACGGATGAGATCTCTCGTT 59.467 40.000 29.12 18.98 45.72 3.85
176 177 5.067273 AGAATTACGGATGAGATCTCTCGT 58.933 41.667 27.96 27.96 45.72 4.18
177 178 5.621197 AGAATTACGGATGAGATCTCTCG 57.379 43.478 22.95 22.62 45.72 4.04
178 179 6.145371 GCAAAGAATTACGGATGAGATCTCTC 59.855 42.308 22.95 16.50 43.15 3.20
179 180 5.988561 GCAAAGAATTACGGATGAGATCTCT 59.011 40.000 22.95 9.13 0.00 3.10
180 181 5.755375 TGCAAAGAATTACGGATGAGATCTC 59.245 40.000 16.21 16.21 0.00 2.75
181 182 5.674525 TGCAAAGAATTACGGATGAGATCT 58.325 37.500 0.00 0.00 0.00 2.75
182 183 5.755375 TCTGCAAAGAATTACGGATGAGATC 59.245 40.000 0.00 0.00 0.00 2.75
183 184 5.674525 TCTGCAAAGAATTACGGATGAGAT 58.325 37.500 0.00 0.00 0.00 2.75
184 185 5.084818 TCTGCAAAGAATTACGGATGAGA 57.915 39.130 0.00 0.00 0.00 3.27
185 186 5.998454 ATCTGCAAAGAATTACGGATGAG 57.002 39.130 0.00 0.00 31.47 2.90
186 187 6.757897 AAATCTGCAAAGAATTACGGATGA 57.242 33.333 0.00 0.00 32.59 2.92
187 188 7.253422 AGAAAATCTGCAAAGAATTACGGATG 58.747 34.615 0.00 0.00 32.59 3.51
188 189 7.396540 AGAAAATCTGCAAAGAATTACGGAT 57.603 32.000 0.00 0.00 33.34 4.18
189 190 6.817765 AGAAAATCTGCAAAGAATTACGGA 57.182 33.333 0.00 0.00 0.00 4.69
190 191 8.450964 TCTAAGAAAATCTGCAAAGAATTACGG 58.549 33.333 0.00 0.00 0.00 4.02
191 192 9.825972 TTCTAAGAAAATCTGCAAAGAATTACG 57.174 29.630 0.00 0.00 0.00 3.18
200 201 9.912634 CCTAACAATTTCTAAGAAAATCTGCAA 57.087 29.630 0.00 0.00 0.00 4.08
201 202 8.028938 GCCTAACAATTTCTAAGAAAATCTGCA 58.971 33.333 0.00 0.00 0.00 4.41
202 203 8.246871 AGCCTAACAATTTCTAAGAAAATCTGC 58.753 33.333 0.00 0.00 0.00 4.26
205 206 9.914131 ACAAGCCTAACAATTTCTAAGAAAATC 57.086 29.630 0.00 0.00 0.00 2.17
209 210 8.500773 CGTAACAAGCCTAACAATTTCTAAGAA 58.499 33.333 0.00 0.00 0.00 2.52
210 211 7.118680 CCGTAACAAGCCTAACAATTTCTAAGA 59.881 37.037 0.00 0.00 0.00 2.10
211 212 7.241376 CCGTAACAAGCCTAACAATTTCTAAG 58.759 38.462 0.00 0.00 0.00 2.18
212 213 6.149807 CCCGTAACAAGCCTAACAATTTCTAA 59.850 38.462 0.00 0.00 0.00 2.10
213 214 5.644636 CCCGTAACAAGCCTAACAATTTCTA 59.355 40.000 0.00 0.00 0.00 2.10
214 215 4.457949 CCCGTAACAAGCCTAACAATTTCT 59.542 41.667 0.00 0.00 0.00 2.52
215 216 4.380128 CCCCGTAACAAGCCTAACAATTTC 60.380 45.833 0.00 0.00 0.00 2.17
216 217 3.508402 CCCCGTAACAAGCCTAACAATTT 59.492 43.478 0.00 0.00 0.00 1.82
217 218 3.086282 CCCCGTAACAAGCCTAACAATT 58.914 45.455 0.00 0.00 0.00 2.32
218 219 2.040679 ACCCCGTAACAAGCCTAACAAT 59.959 45.455 0.00 0.00 0.00 2.71
219 220 1.420891 ACCCCGTAACAAGCCTAACAA 59.579 47.619 0.00 0.00 0.00 2.83
220 221 1.058284 ACCCCGTAACAAGCCTAACA 58.942 50.000 0.00 0.00 0.00 2.41
221 222 2.189594 AACCCCGTAACAAGCCTAAC 57.810 50.000 0.00 0.00 0.00 2.34
222 223 2.552809 GGAAACCCCGTAACAAGCCTAA 60.553 50.000 0.00 0.00 0.00 2.69
223 224 1.003464 GGAAACCCCGTAACAAGCCTA 59.997 52.381 0.00 0.00 0.00 3.93
224 225 0.251033 GGAAACCCCGTAACAAGCCT 60.251 55.000 0.00 0.00 0.00 4.58
225 226 2.260247 GGAAACCCCGTAACAAGCC 58.740 57.895 0.00 0.00 0.00 4.35
238 239 2.975265 CGGGTGGGTAGGGGGAAAC 61.975 68.421 0.00 0.00 0.00 2.78
239 240 2.495705 ATCGGGTGGGTAGGGGGAAA 62.496 60.000 0.00 0.00 0.00 3.13
240 241 2.495705 AATCGGGTGGGTAGGGGGAA 62.496 60.000 0.00 0.00 0.00 3.97
241 242 2.495705 AAATCGGGTGGGTAGGGGGA 62.496 60.000 0.00 0.00 0.00 4.81
242 243 1.577291 AAAATCGGGTGGGTAGGGGG 61.577 60.000 0.00 0.00 0.00 5.40
243 244 0.106868 GAAAATCGGGTGGGTAGGGG 60.107 60.000 0.00 0.00 0.00 4.79
244 245 0.621609 TGAAAATCGGGTGGGTAGGG 59.378 55.000 0.00 0.00 0.00 3.53
245 246 1.408266 CCTGAAAATCGGGTGGGTAGG 60.408 57.143 0.00 0.00 38.13 3.18
246 247 1.557832 TCCTGAAAATCGGGTGGGTAG 59.442 52.381 5.19 0.00 43.49 3.18
247 248 1.557832 CTCCTGAAAATCGGGTGGGTA 59.442 52.381 5.19 0.00 43.49 3.69
248 249 0.328258 CTCCTGAAAATCGGGTGGGT 59.672 55.000 5.19 0.00 43.49 4.51
249 250 3.175133 CTCCTGAAAATCGGGTGGG 57.825 57.895 5.19 0.00 43.49 4.61
250 251 3.175133 CCTCCTGAAAATCGGGTGG 57.825 57.895 10.93 10.93 46.48 4.61
251 252 0.328258 ACCCTCCTGAAAATCGGGTG 59.672 55.000 5.19 3.09 46.02 4.61
252 253 2.787118 ACCCTCCTGAAAATCGGGT 58.213 52.632 5.19 0.00 43.49 5.28
253 254 0.394352 CCACCCTCCTGAAAATCGGG 60.394 60.000 0.00 0.00 44.41 5.14
254 255 0.394352 CCCACCCTCCTGAAAATCGG 60.394 60.000 0.00 0.00 0.00 4.18
255 256 1.032114 GCCCACCCTCCTGAAAATCG 61.032 60.000 0.00 0.00 0.00 3.34
256 257 0.684479 GGCCCACCCTCCTGAAAATC 60.684 60.000 0.00 0.00 0.00 2.17
257 258 1.388133 GGCCCACCCTCCTGAAAAT 59.612 57.895 0.00 0.00 0.00 1.82
258 259 2.851045 GGCCCACCCTCCTGAAAA 59.149 61.111 0.00 0.00 0.00 2.29
272 273 4.118312 TAAGGGGGAGAGGGGGCC 62.118 72.222 0.00 0.00 0.00 5.80
273 274 2.448736 CTAAGGGGGAGAGGGGGC 60.449 72.222 0.00 0.00 0.00 5.80
274 275 1.074395 GACTAAGGGGGAGAGGGGG 60.074 68.421 0.00 0.00 0.00 5.40
275 276 1.074395 GGACTAAGGGGGAGAGGGG 60.074 68.421 0.00 0.00 0.00 4.79
276 277 0.044244 TTGGACTAAGGGGGAGAGGG 59.956 60.000 0.00 0.00 0.00 4.30
277 278 2.050918 GATTGGACTAAGGGGGAGAGG 58.949 57.143 0.00 0.00 0.00 3.69
278 279 1.689273 CGATTGGACTAAGGGGGAGAG 59.311 57.143 0.00 0.00 0.00 3.20
279 280 1.789523 CGATTGGACTAAGGGGGAGA 58.210 55.000 0.00 0.00 0.00 3.71
280 281 0.106894 GCGATTGGACTAAGGGGGAG 59.893 60.000 0.00 0.00 0.00 4.30
281 282 0.619255 TGCGATTGGACTAAGGGGGA 60.619 55.000 0.00 0.00 0.00 4.81
282 283 0.254747 TTGCGATTGGACTAAGGGGG 59.745 55.000 0.00 0.00 0.00 5.40
283 284 2.348411 ATTGCGATTGGACTAAGGGG 57.652 50.000 0.00 0.00 0.00 4.79
284 285 3.734902 GCAAATTGCGATTGGACTAAGGG 60.735 47.826 5.12 0.00 31.71 3.95
285 286 3.438360 GCAAATTGCGATTGGACTAAGG 58.562 45.455 5.12 0.00 31.71 2.69
286 287 3.119531 TGGCAAATTGCGATTGGACTAAG 60.120 43.478 12.15 0.00 46.21 2.18
287 288 2.822561 TGGCAAATTGCGATTGGACTAA 59.177 40.909 12.15 0.00 46.21 2.24
288 289 2.441410 TGGCAAATTGCGATTGGACTA 58.559 42.857 12.15 0.00 46.21 2.59
289 290 1.255882 TGGCAAATTGCGATTGGACT 58.744 45.000 12.15 0.00 46.21 3.85
290 291 1.726248 GTTGGCAAATTGCGATTGGAC 59.274 47.619 12.15 2.13 46.21 4.02
291 292 1.617850 AGTTGGCAAATTGCGATTGGA 59.382 42.857 12.15 0.00 46.21 3.53
292 293 1.994779 GAGTTGGCAAATTGCGATTGG 59.005 47.619 12.15 0.00 46.21 3.16
293 294 2.674954 TGAGTTGGCAAATTGCGATTG 58.325 42.857 12.15 0.00 46.21 2.67
294 295 3.383620 TTGAGTTGGCAAATTGCGATT 57.616 38.095 12.15 0.00 46.21 3.34
295 296 3.383620 TTTGAGTTGGCAAATTGCGAT 57.616 38.095 12.15 0.00 46.21 4.58
296 297 2.879002 TTTGAGTTGGCAAATTGCGA 57.121 40.000 12.15 5.04 46.21 5.10
297 298 3.063180 TGTTTTTGAGTTGGCAAATTGCG 59.937 39.130 12.15 0.00 46.21 4.85
298 299 4.341935 GTGTTTTTGAGTTGGCAAATTGC 58.658 39.130 9.87 9.87 44.08 3.56
299 300 4.201901 GGGTGTTTTTGAGTTGGCAAATTG 60.202 41.667 0.00 0.00 37.57 2.32
300 301 3.944650 GGGTGTTTTTGAGTTGGCAAATT 59.055 39.130 0.00 0.00 37.57 1.82
301 302 3.540617 GGGTGTTTTTGAGTTGGCAAAT 58.459 40.909 0.00 0.00 37.57 2.32
302 303 2.355209 GGGGTGTTTTTGAGTTGGCAAA 60.355 45.455 0.00 0.00 36.08 3.68
303 304 1.208293 GGGGTGTTTTTGAGTTGGCAA 59.792 47.619 0.00 0.00 0.00 4.52
304 305 0.827368 GGGGTGTTTTTGAGTTGGCA 59.173 50.000 0.00 0.00 0.00 4.92
305 306 0.249280 CGGGGTGTTTTTGAGTTGGC 60.249 55.000 0.00 0.00 0.00 4.52
306 307 1.107945 ACGGGGTGTTTTTGAGTTGG 58.892 50.000 0.00 0.00 0.00 3.77
307 308 3.628487 TCTTACGGGGTGTTTTTGAGTTG 59.372 43.478 0.00 0.00 0.00 3.16
308 309 3.628942 GTCTTACGGGGTGTTTTTGAGTT 59.371 43.478 0.00 0.00 0.00 3.01
309 310 3.208594 GTCTTACGGGGTGTTTTTGAGT 58.791 45.455 0.00 0.00 0.00 3.41
310 311 3.002965 GTGTCTTACGGGGTGTTTTTGAG 59.997 47.826 0.00 0.00 0.00 3.02
311 312 2.944349 GTGTCTTACGGGGTGTTTTTGA 59.056 45.455 0.00 0.00 0.00 2.69
312 313 2.033675 GGTGTCTTACGGGGTGTTTTTG 59.966 50.000 0.00 0.00 0.00 2.44
313 314 2.300433 GGTGTCTTACGGGGTGTTTTT 58.700 47.619 0.00 0.00 0.00 1.94
314 315 1.477377 GGGTGTCTTACGGGGTGTTTT 60.477 52.381 0.00 0.00 0.00 2.43
315 316 0.109153 GGGTGTCTTACGGGGTGTTT 59.891 55.000 0.00 0.00 0.00 2.83
316 317 1.756665 GGGTGTCTTACGGGGTGTT 59.243 57.895 0.00 0.00 0.00 3.32
317 318 2.576832 CGGGTGTCTTACGGGGTGT 61.577 63.158 0.00 0.00 0.00 4.16
318 319 1.250154 TACGGGTGTCTTACGGGGTG 61.250 60.000 0.00 0.00 0.00 4.61
319 320 0.541764 TTACGGGTGTCTTACGGGGT 60.542 55.000 0.00 0.00 0.00 4.95
320 321 0.607620 TTTACGGGTGTCTTACGGGG 59.392 55.000 0.00 0.00 0.00 5.73
321 322 1.273327 ACTTTACGGGTGTCTTACGGG 59.727 52.381 0.00 0.00 0.00 5.28
322 323 2.730550 ACTTTACGGGTGTCTTACGG 57.269 50.000 0.00 0.00 0.00 4.02
323 324 2.989166 GGAACTTTACGGGTGTCTTACG 59.011 50.000 0.00 0.00 0.00 3.18
324 325 2.989166 CGGAACTTTACGGGTGTCTTAC 59.011 50.000 0.00 0.00 0.00 2.34
325 326 2.627699 ACGGAACTTTACGGGTGTCTTA 59.372 45.455 0.00 0.00 39.29 2.10
326 327 1.413812 ACGGAACTTTACGGGTGTCTT 59.586 47.619 0.00 0.00 39.29 3.01
327 328 1.043022 ACGGAACTTTACGGGTGTCT 58.957 50.000 0.00 0.00 39.29 3.41
328 329 1.528161 CAACGGAACTTTACGGGTGTC 59.472 52.381 0.00 0.00 39.29 3.67
329 330 1.138661 TCAACGGAACTTTACGGGTGT 59.861 47.619 0.00 0.00 39.29 4.16
330 331 1.868469 TCAACGGAACTTTACGGGTG 58.132 50.000 0.00 0.00 39.29 4.61
331 332 2.224354 ACATCAACGGAACTTTACGGGT 60.224 45.455 0.00 0.00 39.29 5.28
332 333 2.419667 ACATCAACGGAACTTTACGGG 58.580 47.619 0.00 0.00 39.29 5.28
333 334 3.061697 GCTACATCAACGGAACTTTACGG 59.938 47.826 0.00 0.00 39.29 4.02
334 335 3.676172 TGCTACATCAACGGAACTTTACG 59.324 43.478 0.00 0.00 41.22 3.18
335 336 5.796350 ATGCTACATCAACGGAACTTTAC 57.204 39.130 0.00 0.00 0.00 2.01
336 337 5.391523 GCAATGCTACATCAACGGAACTTTA 60.392 40.000 0.00 0.00 0.00 1.85
337 338 4.615912 GCAATGCTACATCAACGGAACTTT 60.616 41.667 0.00 0.00 0.00 2.66
338 339 3.119849 GCAATGCTACATCAACGGAACTT 60.120 43.478 0.00 0.00 0.00 2.66
339 340 2.420022 GCAATGCTACATCAACGGAACT 59.580 45.455 0.00 0.00 0.00 3.01
340 341 2.420022 AGCAATGCTACATCAACGGAAC 59.580 45.455 5.69 0.00 36.99 3.62
341 342 2.677836 GAGCAATGCTACATCAACGGAA 59.322 45.455 8.12 0.00 39.88 4.30
342 343 2.279741 GAGCAATGCTACATCAACGGA 58.720 47.619 8.12 0.00 39.88 4.69
343 344 1.004610 CGAGCAATGCTACATCAACGG 60.005 52.381 8.12 0.00 39.88 4.44
344 345 1.660607 ACGAGCAATGCTACATCAACG 59.339 47.619 8.12 8.27 39.88 4.10
345 346 2.416547 ACACGAGCAATGCTACATCAAC 59.583 45.455 8.12 0.00 39.88 3.18
346 347 2.698803 ACACGAGCAATGCTACATCAA 58.301 42.857 8.12 0.00 39.88 2.57
347 348 2.385013 ACACGAGCAATGCTACATCA 57.615 45.000 8.12 0.00 39.88 3.07
348 349 4.857871 TTTACACGAGCAATGCTACATC 57.142 40.909 8.12 0.00 39.88 3.06
349 350 8.777865 ATATATTTACACGAGCAATGCTACAT 57.222 30.769 8.12 0.00 39.88 2.29
350 351 9.135843 GTATATATTTACACGAGCAATGCTACA 57.864 33.333 8.12 0.00 39.88 2.74
351 352 8.311822 CGTATATATTTACACGAGCAATGCTAC 58.688 37.037 8.12 0.90 39.88 3.58
352 353 7.008901 GCGTATATATTTACACGAGCAATGCTA 59.991 37.037 8.12 0.00 39.88 3.49
353 354 6.183360 GCGTATATATTTACACGAGCAATGCT 60.183 38.462 7.79 7.79 43.88 3.79
354 355 5.952064 GCGTATATATTTACACGAGCAATGC 59.048 40.000 9.41 0.00 36.53 3.56
355 356 6.948228 GTGCGTATATATTTACACGAGCAATG 59.052 38.462 9.41 0.00 36.53 2.82
356 357 6.643360 TGTGCGTATATATTTACACGAGCAAT 59.357 34.615 9.41 0.00 36.53 3.56
357 358 5.978322 TGTGCGTATATATTTACACGAGCAA 59.022 36.000 9.41 0.00 36.53 3.91
358 359 5.521544 TGTGCGTATATATTTACACGAGCA 58.478 37.500 9.41 4.88 36.53 4.26
359 360 6.442487 TTGTGCGTATATATTTACACGAGC 57.558 37.500 9.41 2.79 36.53 5.03
360 361 9.933175 GTATTTGTGCGTATATATTTACACGAG 57.067 33.333 9.41 0.00 36.53 4.18
361 362 9.681692 AGTATTTGTGCGTATATATTTACACGA 57.318 29.630 9.41 4.37 36.53 4.35
372 373 9.135843 GCATAATGAGTAGTATTTGTGCGTATA 57.864 33.333 0.00 0.00 0.00 1.47
373 374 7.117812 GGCATAATGAGTAGTATTTGTGCGTAT 59.882 37.037 7.26 0.00 32.97 3.06
374 375 6.422701 GGCATAATGAGTAGTATTTGTGCGTA 59.577 38.462 7.26 0.00 32.97 4.42
375 376 5.236478 GGCATAATGAGTAGTATTTGTGCGT 59.764 40.000 7.26 0.00 32.97 5.24
376 377 5.612492 CGGCATAATGAGTAGTATTTGTGCG 60.612 44.000 7.26 0.00 32.97 5.34
377 378 5.236478 ACGGCATAATGAGTAGTATTTGTGC 59.764 40.000 5.57 5.57 32.18 4.57
378 379 6.844696 ACGGCATAATGAGTAGTATTTGTG 57.155 37.500 0.00 0.00 0.00 3.33
379 380 7.723324 AGTACGGCATAATGAGTAGTATTTGT 58.277 34.615 0.00 0.00 0.00 2.83
380 381 8.589335 AAGTACGGCATAATGAGTAGTATTTG 57.411 34.615 0.00 0.00 0.00 2.32
381 382 8.418662 TGAAGTACGGCATAATGAGTAGTATTT 58.581 33.333 0.00 0.00 0.00 1.40
382 383 7.948357 TGAAGTACGGCATAATGAGTAGTATT 58.052 34.615 0.00 0.00 0.00 1.89
383 384 7.520451 TGAAGTACGGCATAATGAGTAGTAT 57.480 36.000 0.00 0.00 0.00 2.12
384 385 6.947644 TGAAGTACGGCATAATGAGTAGTA 57.052 37.500 0.00 0.00 0.00 1.82
385 386 5.847111 TGAAGTACGGCATAATGAGTAGT 57.153 39.130 0.00 0.00 0.00 2.73
386 387 5.119279 GCATGAAGTACGGCATAATGAGTAG 59.881 44.000 0.00 0.00 0.00 2.57
387 388 4.988540 GCATGAAGTACGGCATAATGAGTA 59.011 41.667 0.00 0.00 0.00 2.59
388 389 3.809832 GCATGAAGTACGGCATAATGAGT 59.190 43.478 0.00 0.00 0.00 3.41
389 390 3.187227 GGCATGAAGTACGGCATAATGAG 59.813 47.826 0.00 0.00 0.00 2.90
390 391 3.138304 GGCATGAAGTACGGCATAATGA 58.862 45.455 0.00 0.00 0.00 2.57
391 392 2.096268 CGGCATGAAGTACGGCATAATG 60.096 50.000 0.00 0.00 0.00 1.90
392 393 2.143122 CGGCATGAAGTACGGCATAAT 58.857 47.619 0.00 0.00 0.00 1.28
393 394 1.137282 TCGGCATGAAGTACGGCATAA 59.863 47.619 0.00 0.00 0.00 1.90
394 395 0.747852 TCGGCATGAAGTACGGCATA 59.252 50.000 0.00 0.00 0.00 3.14
395 396 0.530650 CTCGGCATGAAGTACGGCAT 60.531 55.000 0.00 0.00 0.00 4.40
396 397 1.153647 CTCGGCATGAAGTACGGCA 60.154 57.895 0.00 0.00 0.00 5.69
397 398 2.526120 GCTCGGCATGAAGTACGGC 61.526 63.158 0.00 0.00 0.00 5.68
398 399 2.230940 CGCTCGGCATGAAGTACGG 61.231 63.158 0.00 0.00 0.00 4.02
399 400 2.860628 GCGCTCGGCATGAAGTACG 61.861 63.158 0.00 0.00 42.87 3.67
400 401 2.860628 CGCGCTCGGCATGAAGTAC 61.861 63.158 5.56 0.00 43.84 2.73
421 422 3.702330 GTTTAAACAACACTGTGAGCCC 58.298 45.455 15.86 0.00 35.37 5.19
437 438 2.620242 GAATCAGGCCGTACCGTTTAA 58.380 47.619 0.00 0.00 46.52 1.52
458 459 4.013267 AGCATACATGTTCATCTAGGCC 57.987 45.455 2.30 0.00 0.00 5.19
467 468 6.385033 AGCAAAAAGAGAAGCATACATGTTC 58.615 36.000 2.30 0.00 0.00 3.18
489 490 9.193133 GAGTTTTGGAAACTTTAGGAATAAAGC 57.807 33.333 7.42 0.00 39.88 3.51
513 514 8.272545 TGGATTTAAAATGAGTGAGACATGAG 57.727 34.615 0.00 0.00 0.00 2.90
557 559 7.225341 GTCATTGGAGAAAGCTTGTTGATTTTT 59.775 33.333 0.00 0.00 34.06 1.94
558 560 6.703165 GTCATTGGAGAAAGCTTGTTGATTTT 59.297 34.615 0.00 0.00 34.06 1.82
707 716 9.006939 GCAATTTGCTTCCATACCAAAATGGAG 62.007 40.741 14.11 2.88 44.11 3.86
708 717 7.295955 GCAATTTGCTTCCATACCAAAATGGA 61.296 38.462 14.11 1.43 45.37 3.41
709 718 5.163733 GCAATTTGCTTCCATACCAAAATGG 60.164 40.000 14.11 0.00 43.00 3.16
710 719 5.411977 TGCAATTTGCTTCCATACCAAAATG 59.588 36.000 21.19 0.00 45.31 2.32
714 723 4.222366 TCATGCAATTTGCTTCCATACCAA 59.778 37.500 21.19 0.00 45.31 3.67
716 725 4.365723 CTCATGCAATTTGCTTCCATACC 58.634 43.478 21.19 0.00 45.31 2.73
793 952 8.893727 AGTTTGCATGGAGAATATTACACTAAC 58.106 33.333 0.00 0.00 0.00 2.34
844 1046 2.433664 AGGCGCTACGAAAACCCG 60.434 61.111 7.64 0.00 0.00 5.28
938 1148 0.590195 GTAGGATCCGCGTACGTGAT 59.410 55.000 29.24 23.09 37.70 3.06
950 1160 0.676736 CTCGCCCAAGAGGTAGGATC 59.323 60.000 0.00 0.00 38.26 3.36
1021 1231 2.766698 TGATGGTCTTCCCCGTCAA 58.233 52.632 0.00 0.00 45.36 3.18
1105 1315 0.517316 AGCAAAGGACAAATCGACGC 59.483 50.000 0.00 0.00 0.00 5.19
1142 1352 3.576356 GATCGTGGCCGGCACATG 61.576 66.667 30.85 26.37 33.95 3.21
1161 1372 3.204827 CCAGAGAAATGGCGGCCG 61.205 66.667 24.05 24.05 32.48 6.13
1176 1387 2.797330 CATGCATAAACGCGCCCA 59.203 55.556 5.73 0.00 33.35 5.36
1179 1390 0.866906 ACATGCATGCATAAACGCGC 60.867 50.000 31.73 0.00 34.91 6.86
1189 1400 3.077705 CGCAAAGCACATGCATGC 58.922 55.556 26.53 15.62 46.03 4.06
1197 1409 8.553921 GTACAGTAGTATTCAGCGCAAAGCAC 62.554 46.154 11.47 6.11 39.53 4.40
1216 1428 4.090930 GCACGAACGACAAATATGTACAGT 59.909 41.667 0.33 0.00 40.74 3.55
1217 1429 4.090786 TGCACGAACGACAAATATGTACAG 59.909 41.667 0.33 0.00 40.74 2.74
1488 1700 4.151297 CACGCACGCACGCATGAT 62.151 61.111 0.00 0.00 36.19 2.45
1495 1720 2.813474 TCATAGGCACGCACGCAC 60.813 61.111 0.00 0.00 0.00 5.34
1674 4570 1.006281 TGGGCCTCAGCTGAAATTCAT 59.994 47.619 18.85 0.00 39.73 2.57
1676 4572 1.475682 CTTGGGCCTCAGCTGAAATTC 59.524 52.381 18.85 8.65 39.73 2.17
1678 4574 0.700564 TCTTGGGCCTCAGCTGAAAT 59.299 50.000 18.85 0.00 39.73 2.17
1716 4612 1.875813 AGAATTGCTCGCTCGCTCG 60.876 57.895 0.00 0.00 0.00 5.03
1778 4674 6.582672 CGATGCTAAGACGATTTATTCAGCTA 59.417 38.462 0.00 0.00 0.00 3.32
1844 4740 2.838637 AACCCTCACACCCTCAAAAA 57.161 45.000 0.00 0.00 0.00 1.94
1845 4741 2.838637 AAACCCTCACACCCTCAAAA 57.161 45.000 0.00 0.00 0.00 2.44
1846 4742 2.838637 AAAACCCTCACACCCTCAAA 57.161 45.000 0.00 0.00 0.00 2.69
1847 4743 3.203487 ACTTAAAACCCTCACACCCTCAA 59.797 43.478 0.00 0.00 0.00 3.02
1848 4744 2.781174 ACTTAAAACCCTCACACCCTCA 59.219 45.455 0.00 0.00 0.00 3.86
1849 4745 3.503800 ACTTAAAACCCTCACACCCTC 57.496 47.619 0.00 0.00 0.00 4.30
1857 4753 5.235516 TGATCGACTCAACTTAAAACCCTC 58.764 41.667 0.00 0.00 0.00 4.30
1880 4776 6.920758 GCGATGAACTTGACTATGAGACTAAT 59.079 38.462 0.00 0.00 0.00 1.73
1886 4782 5.980698 ATTGCGATGAACTTGACTATGAG 57.019 39.130 0.00 0.00 0.00 2.90
1902 4798 4.509970 CCGGACTGACATTTTATATTGCGA 59.490 41.667 0.00 0.00 0.00 5.10
1931 4827 5.757808 GGAAAAACCAGCTTGCAAAGATTAA 59.242 36.000 0.00 0.00 41.66 1.40
1939 4836 1.412343 GGAAGGAAAAACCAGCTTGCA 59.588 47.619 0.00 0.00 42.04 4.08
1944 4841 4.400529 TGAAAAGGAAGGAAAAACCAGC 57.599 40.909 0.00 0.00 42.04 4.85
1948 4845 7.716612 TGAGAAGATGAAAAGGAAGGAAAAAC 58.283 34.615 0.00 0.00 0.00 2.43
1954 4851 6.890979 AAACTGAGAAGATGAAAAGGAAGG 57.109 37.500 0.00 0.00 0.00 3.46
1956 4853 9.573166 TGATAAAACTGAGAAGATGAAAAGGAA 57.427 29.630 0.00 0.00 0.00 3.36
1962 4859 8.950210 GGTGAATGATAAAACTGAGAAGATGAA 58.050 33.333 0.00 0.00 0.00 2.57
1964 4861 8.503458 AGGTGAATGATAAAACTGAGAAGATG 57.497 34.615 0.00 0.00 0.00 2.90
1965 4862 9.171877 GAAGGTGAATGATAAAACTGAGAAGAT 57.828 33.333 0.00 0.00 0.00 2.40
2001 4899 0.392336 GATTTTGTTGTGGCAGGCCA 59.608 50.000 9.35 9.35 45.02 5.36
2009 4907 3.870723 TCGAACTCGGATTTTGTTGTG 57.129 42.857 0.00 0.00 40.29 3.33
2054 4952 8.692110 TTGAATGCTCAATGATAATTTGTCAC 57.308 30.769 0.00 0.00 36.62 3.67
2072 4970 3.620488 TGACCTACCTTCCATTGAATGC 58.380 45.455 0.00 0.00 0.00 3.56
2098 7301 5.221880 CCAAAGTCAATTTTGAGCGATTCA 58.778 37.500 0.09 0.00 39.79 2.57
2099 7302 4.622740 CCCAAAGTCAATTTTGAGCGATTC 59.377 41.667 0.09 0.00 39.79 2.52
2104 7358 3.006217 AGAGCCCAAAGTCAATTTTGAGC 59.994 43.478 0.09 0.00 40.71 4.26
2130 7384 9.473007 TTTCTTTCCCAAATTCAAAAATTTCCT 57.527 25.926 0.00 0.00 41.96 3.36
2197 7452 3.159213 ACATGAGCAAGGTTCCATGAA 57.841 42.857 0.00 0.00 38.83 2.57
2300 7574 6.493115 TGTTGATATGTTCATGTTTCCCTTGT 59.507 34.615 0.00 0.00 33.34 3.16
2339 7613 6.095580 TCTCATATGATCTACGGGTATCTTGC 59.904 42.308 5.72 0.00 0.00 4.01
2348 7622 7.773224 ACTTCCTCTATCTCATATGATCTACGG 59.227 40.741 5.72 3.66 0.00 4.02
2371 7645 7.226059 ACTTGGGGGAAATCATATCTTACTT 57.774 36.000 0.00 0.00 0.00 2.24
2382 7656 3.265995 TGTCTTAGGACTTGGGGGAAATC 59.734 47.826 6.54 0.00 42.54 2.17
2438 7716 3.846360 CGGAGTACAAAGGAACCTACAG 58.154 50.000 0.00 0.00 0.00 2.74
2488 7788 7.524698 GCCTCTTCTAGTGGGATTACTCTATTG 60.525 44.444 0.00 0.00 32.19 1.90
2492 7792 4.219919 GCCTCTTCTAGTGGGATTACTCT 58.780 47.826 0.00 0.00 32.19 3.24
2495 7795 3.961408 TCTGCCTCTTCTAGTGGGATTAC 59.039 47.826 0.00 0.00 28.97 1.89
2499 7799 2.023984 TCATCTGCCTCTTCTAGTGGGA 60.024 50.000 0.00 0.00 29.86 4.37
2508 7808 2.117865 AGCTTAGCTCATCTGCCTCTT 58.882 47.619 0.00 0.00 30.62 2.85
2537 7837 5.234466 AGCCAAGACTAGAACTCATGTTT 57.766 39.130 0.00 0.00 36.39 2.83
2570 7870 7.973193 TGGATCTATATATTTCCCCCTCCTAA 58.027 38.462 8.07 0.00 0.00 2.69
2581 7881 8.609617 TCCTTCGTGGATGGATCTATATATTT 57.390 34.615 0.00 0.00 40.56 1.40
2600 7900 0.321671 TGCCTTCCTCACTTCCTTCG 59.678 55.000 0.00 0.00 0.00 3.79
2618 7921 5.611374 ACGGGGACAACTCATCTATATTTG 58.389 41.667 0.00 0.00 0.00 2.32
2622 7925 4.795469 TGTACGGGGACAACTCATCTATA 58.205 43.478 0.00 0.00 0.00 1.31
2635 7938 1.546923 CTACACACACATGTACGGGGA 59.453 52.381 0.00 0.00 36.72 4.81
2636 7939 1.404986 CCTACACACACATGTACGGGG 60.405 57.143 0.00 0.00 36.72 5.73
2640 7943 4.673580 CGACCTACCTACACACACATGTAC 60.674 50.000 0.00 0.00 36.72 2.90
2650 7953 2.292845 GGACTATGCGACCTACCTACAC 59.707 54.545 0.00 0.00 0.00 2.90



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.