Multiple sequence alignment - TraesCS6A01G147800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G147800 chr6A 100.000 4408 0 0 1 4408 128437362 128441769 0.000000e+00 8141
1 TraesCS6A01G147800 chr6D 96.010 3283 85 24 240 3508 105816445 105819695 0.000000e+00 5295
2 TraesCS6A01G147800 chr6D 91.667 336 24 4 4074 4408 441752712 441753044 3.110000e-126 462
3 TraesCS6A01G147800 chr6D 90.351 114 9 1 3501 3612 105819721 105819834 9.880000e-32 148
4 TraesCS6A01G147800 chr6B 94.755 1773 74 13 272 2031 192344436 192346202 0.000000e+00 2741
5 TraesCS6A01G147800 chr6B 96.959 1480 23 4 2032 3508 192347729 192349189 0.000000e+00 2464
6 TraesCS6A01G147800 chr6B 99.587 242 1 0 1 242 400677148 400676907 4.050000e-120 442
7 TraesCS6A01G147800 chr6B 98.008 251 3 2 1 249 418685657 418685907 6.770000e-118 435
8 TraesCS6A01G147800 chr6B 91.964 112 7 1 3501 3610 192349216 192349327 5.900000e-34 156
9 TraesCS6A01G147800 chr1D 88.298 846 54 18 3608 4408 74531961 74531116 0.000000e+00 972
10 TraesCS6A01G147800 chr2B 93.038 316 21 1 4093 4408 673626728 673627042 1.120000e-125 460
11 TraesCS6A01G147800 chr5A 92.722 316 22 1 4093 4408 640353448 640353134 5.200000e-124 455
12 TraesCS6A01G147800 chr5A 98.361 244 2 2 1 243 648024273 648024515 1.130000e-115 427
13 TraesCS6A01G147800 chr5B 92.089 316 24 1 4093 4408 339918611 339918925 1.130000e-120 444
14 TraesCS6A01G147800 chr5B 96.364 165 6 0 1307 1471 274350682 274350846 5.620000e-69 272
15 TraesCS6A01G147800 chr7A 100.000 239 0 0 1 239 483113450 483113212 4.050000e-120 442
16 TraesCS6A01G147800 chr7A 96.875 256 8 0 1 256 300288739 300288484 3.150000e-116 429
17 TraesCS6A01G147800 chr1B 98.780 246 3 0 1 246 682391194 682391439 5.230000e-119 438
18 TraesCS6A01G147800 chr1B 95.808 167 7 0 1306 1472 355408020 355408186 2.020000e-68 270
19 TraesCS6A01G147800 chr3A 97.992 249 4 1 1 249 528088756 528089003 8.760000e-117 431
20 TraesCS6A01G147800 chr3A 96.787 249 7 1 1 248 535920691 535920939 8.820000e-112 414
21 TraesCS6A01G147800 chr4B 96.525 259 7 1 1 259 275322694 275322438 1.130000e-115 427
22 TraesCS6A01G147800 chr4B 95.783 166 7 0 1307 1472 149030531 149030366 7.270000e-68 268
23 TraesCS6A01G147800 chr3D 90.875 263 23 1 4147 4408 577418058 577418320 7.010000e-93 351
24 TraesCS6A01G147800 chr3D 95.783 166 7 0 1307 1472 225855052 225855217 7.270000e-68 268
25 TraesCS6A01G147800 chr3D 95.783 166 7 0 1307 1472 264712122 264712287 7.270000e-68 268
26 TraesCS6A01G147800 chr2D 91.440 257 21 1 4147 4402 350056812 350057068 7.010000e-93 351
27 TraesCS6A01G147800 chrUn 90.272 257 23 2 4147 4402 315365849 315366104 7.060000e-88 335
28 TraesCS6A01G147800 chrUn 90.272 257 23 2 4147 4402 397322523 397322778 7.060000e-88 335
29 TraesCS6A01G147800 chr5D 96.988 166 5 0 1307 1472 67584605 67584770 3.360000e-71 279
30 TraesCS6A01G147800 chr5D 96.364 165 6 0 1307 1471 277252058 277252222 5.620000e-69 272


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G147800 chr6A 128437362 128441769 4407 False 8141.0 8141 100.000000 1 4408 1 chr6A.!!$F1 4407
1 TraesCS6A01G147800 chr6D 105816445 105819834 3389 False 2721.5 5295 93.180500 240 3612 2 chr6D.!!$F2 3372
2 TraesCS6A01G147800 chr6B 192344436 192349327 4891 False 1787.0 2741 94.559333 272 3610 3 chr6B.!!$F2 3338
3 TraesCS6A01G147800 chr1D 74531116 74531961 845 True 972.0 972 88.298000 3608 4408 1 chr1D.!!$R1 800

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 169 0.037046 GACACCCGTGGAAATACCGT 60.037 55.000 0.00 0.0 42.61 4.83 F
245 246 0.108138 CGGGGTCCTGACATCAACTC 60.108 60.000 0.00 0.0 0.00 3.01 F
246 247 0.984230 GGGGTCCTGACATCAACTCA 59.016 55.000 0.00 0.0 0.00 3.41 F
572 578 1.153369 CAGGACGTCGCCAATGGAT 60.153 57.895 9.92 0.0 0.00 3.41 F
2136 3684 1.227089 CTCGATTCACCCAGGCTCG 60.227 63.158 0.00 0.0 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1341 1353 0.258774 AGCAAACTTCCACACACCCT 59.741 50.000 0.00 0.0 0.0 4.34 R
2121 3669 0.960364 TTTGCGAGCCTGGGTGAATC 60.960 55.000 1.59 0.0 0.0 2.52 R
2215 3766 6.567602 ACCAGAAACAGATTATTAGCTCCT 57.432 37.500 0.00 0.0 0.0 3.69 R
2265 3816 8.980481 TGAGGAGGTATAAAAAGATTTCCATC 57.020 34.615 0.00 0.0 0.0 3.51 R
3857 5448 0.749454 GCTCGTGGATCTGGCCAAAT 60.749 55.000 7.01 0.0 40.2 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.573210 CTGGGTCATGGATGCCTG 57.427 61.111 0.00 0.00 0.00 4.85
18 19 1.611419 CTGGGTCATGGATGCCTGT 59.389 57.895 0.00 0.00 0.00 4.00
19 20 0.465097 CTGGGTCATGGATGCCTGTC 60.465 60.000 0.00 0.00 0.00 3.51
20 21 1.152881 GGGTCATGGATGCCTGTCC 60.153 63.158 0.00 0.00 38.81 4.02
21 22 1.152881 GGTCATGGATGCCTGTCCC 60.153 63.158 0.00 0.00 37.48 4.46
22 23 1.639635 GGTCATGGATGCCTGTCCCT 61.640 60.000 0.00 0.00 37.48 4.20
23 24 0.465097 GTCATGGATGCCTGTCCCTG 60.465 60.000 0.00 0.00 37.48 4.45
24 25 0.915872 TCATGGATGCCTGTCCCTGT 60.916 55.000 0.00 0.00 37.48 4.00
25 26 0.839277 CATGGATGCCTGTCCCTGTA 59.161 55.000 0.00 0.00 37.48 2.74
26 27 1.135094 ATGGATGCCTGTCCCTGTAG 58.865 55.000 0.00 0.00 37.48 2.74
27 28 0.982852 TGGATGCCTGTCCCTGTAGG 60.983 60.000 0.00 0.00 37.48 3.18
28 29 0.983378 GGATGCCTGTCCCTGTAGGT 60.983 60.000 0.00 0.00 36.44 3.08
29 30 0.912486 GATGCCTGTCCCTGTAGGTT 59.088 55.000 0.00 0.00 36.44 3.50
30 31 1.282157 GATGCCTGTCCCTGTAGGTTT 59.718 52.381 0.00 0.00 36.44 3.27
31 32 0.400213 TGCCTGTCCCTGTAGGTTTG 59.600 55.000 0.00 0.00 36.44 2.93
32 33 0.400594 GCCTGTCCCTGTAGGTTTGT 59.599 55.000 0.00 0.00 36.44 2.83
33 34 1.882352 GCCTGTCCCTGTAGGTTTGTG 60.882 57.143 0.00 0.00 36.44 3.33
34 35 1.523758 CTGTCCCTGTAGGTTTGTGC 58.476 55.000 0.00 0.00 36.75 4.57
35 36 0.109723 TGTCCCTGTAGGTTTGTGCC 59.890 55.000 0.00 0.00 36.75 5.01
36 37 0.109723 GTCCCTGTAGGTTTGTGCCA 59.890 55.000 0.00 0.00 36.75 4.92
37 38 0.109723 TCCCTGTAGGTTTGTGCCAC 59.890 55.000 0.00 0.00 36.75 5.01
38 39 0.110486 CCCTGTAGGTTTGTGCCACT 59.890 55.000 0.00 0.00 0.00 4.00
39 40 1.478654 CCCTGTAGGTTTGTGCCACTT 60.479 52.381 0.00 0.00 0.00 3.16
40 41 2.306847 CCTGTAGGTTTGTGCCACTTT 58.693 47.619 0.00 0.00 0.00 2.66
41 42 2.034558 CCTGTAGGTTTGTGCCACTTTG 59.965 50.000 0.00 0.00 0.00 2.77
42 43 2.028130 TGTAGGTTTGTGCCACTTTGG 58.972 47.619 0.00 0.00 41.55 3.28
43 44 1.339929 GTAGGTTTGTGCCACTTTGGG 59.660 52.381 0.00 0.00 38.19 4.12
44 45 0.325203 AGGTTTGTGCCACTTTGGGT 60.325 50.000 0.00 0.00 38.19 4.51
45 46 0.539518 GGTTTGTGCCACTTTGGGTT 59.460 50.000 0.00 0.00 38.19 4.11
46 47 1.065782 GGTTTGTGCCACTTTGGGTTT 60.066 47.619 0.00 0.00 38.19 3.27
47 48 2.168728 GGTTTGTGCCACTTTGGGTTTA 59.831 45.455 0.00 0.00 38.19 2.01
48 49 3.191669 GTTTGTGCCACTTTGGGTTTAC 58.808 45.455 0.00 0.00 38.19 2.01
49 50 1.025812 TGTGCCACTTTGGGTTTACG 58.974 50.000 0.00 0.00 38.19 3.18
50 51 1.310904 GTGCCACTTTGGGTTTACGA 58.689 50.000 0.00 0.00 38.19 3.43
51 52 1.002142 GTGCCACTTTGGGTTTACGAC 60.002 52.381 0.00 0.00 38.19 4.34
52 53 1.134037 TGCCACTTTGGGTTTACGACT 60.134 47.619 0.00 0.00 38.19 4.18
53 54 2.104451 TGCCACTTTGGGTTTACGACTA 59.896 45.455 0.00 0.00 38.19 2.59
54 55 2.740447 GCCACTTTGGGTTTACGACTAG 59.260 50.000 0.00 0.00 38.19 2.57
55 56 2.740447 CCACTTTGGGTTTACGACTAGC 59.260 50.000 0.00 0.00 32.67 3.42
56 57 2.740447 CACTTTGGGTTTACGACTAGCC 59.260 50.000 0.00 0.00 0.00 3.93
57 58 2.369532 ACTTTGGGTTTACGACTAGCCA 59.630 45.455 0.00 0.00 39.97 4.75
58 59 3.008704 ACTTTGGGTTTACGACTAGCCAT 59.991 43.478 7.05 0.00 41.19 4.40
59 60 2.684001 TGGGTTTACGACTAGCCATG 57.316 50.000 0.00 0.00 37.03 3.66
60 61 1.903860 TGGGTTTACGACTAGCCATGT 59.096 47.619 0.00 0.00 37.03 3.21
61 62 2.093869 TGGGTTTACGACTAGCCATGTC 60.094 50.000 0.00 0.00 37.03 3.06
62 63 2.093869 GGGTTTACGACTAGCCATGTCA 60.094 50.000 0.00 0.00 34.37 3.58
63 64 3.187700 GGTTTACGACTAGCCATGTCAG 58.812 50.000 0.00 0.00 34.37 3.51
64 65 2.579207 TTACGACTAGCCATGTCAGC 57.421 50.000 0.00 0.00 34.37 4.26
65 66 0.744874 TACGACTAGCCATGTCAGCC 59.255 55.000 0.00 0.00 34.37 4.85
66 67 1.227380 CGACTAGCCATGTCAGCCC 60.227 63.158 0.00 0.00 34.37 5.19
67 68 1.227380 GACTAGCCATGTCAGCCCG 60.227 63.158 0.00 0.00 34.80 6.13
68 69 2.109799 CTAGCCATGTCAGCCCGG 59.890 66.667 0.00 0.00 0.00 5.73
69 70 3.466791 CTAGCCATGTCAGCCCGGG 62.467 68.421 19.09 19.09 0.00 5.73
80 81 3.161557 GCCCGGGCTCCTTATCAT 58.838 61.111 38.76 0.00 38.26 2.45
81 82 2.372852 GCCCGGGCTCCTTATCATA 58.627 57.895 38.76 0.00 38.26 2.15
82 83 0.912486 GCCCGGGCTCCTTATCATAT 59.088 55.000 38.76 0.00 38.26 1.78
83 84 1.407437 GCCCGGGCTCCTTATCATATG 60.407 57.143 38.76 0.00 38.26 1.78
84 85 1.210478 CCCGGGCTCCTTATCATATGG 59.790 57.143 8.08 0.00 0.00 2.74
85 86 2.187958 CCGGGCTCCTTATCATATGGA 58.812 52.381 2.13 0.00 0.00 3.41
86 87 2.774234 CCGGGCTCCTTATCATATGGAT 59.226 50.000 2.13 0.00 40.14 3.41
87 88 3.432749 CCGGGCTCCTTATCATATGGATG 60.433 52.174 2.13 0.00 36.72 3.51
88 89 3.549794 GGGCTCCTTATCATATGGATGC 58.450 50.000 2.13 6.23 36.72 3.91
89 90 3.201708 GGGCTCCTTATCATATGGATGCT 59.798 47.826 2.13 0.00 36.72 3.79
90 91 4.410228 GGGCTCCTTATCATATGGATGCTA 59.590 45.833 2.13 0.00 36.72 3.49
91 92 5.454471 GGGCTCCTTATCATATGGATGCTAG 60.454 48.000 2.13 0.00 36.72 3.42
92 93 5.055812 GCTCCTTATCATATGGATGCTAGC 58.944 45.833 8.10 8.10 36.72 3.42
93 94 5.268118 TCCTTATCATATGGATGCTAGCG 57.732 43.478 10.77 0.00 36.72 4.26
94 95 4.956075 TCCTTATCATATGGATGCTAGCGA 59.044 41.667 10.77 0.00 36.72 4.93
95 96 5.046529 CCTTATCATATGGATGCTAGCGAC 58.953 45.833 10.77 6.33 36.72 5.19
96 97 5.394553 CCTTATCATATGGATGCTAGCGACA 60.395 44.000 10.77 9.20 36.72 4.35
97 98 3.303881 TCATATGGATGCTAGCGACAC 57.696 47.619 10.77 0.81 32.62 3.67
98 99 2.893489 TCATATGGATGCTAGCGACACT 59.107 45.455 10.77 0.00 32.62 3.55
99 100 4.079253 TCATATGGATGCTAGCGACACTA 58.921 43.478 10.77 0.00 32.62 2.74
100 101 4.706962 TCATATGGATGCTAGCGACACTAT 59.293 41.667 10.77 7.20 32.62 2.12
101 102 3.584406 ATGGATGCTAGCGACACTATC 57.416 47.619 10.77 6.09 0.00 2.08
102 103 2.306847 TGGATGCTAGCGACACTATCA 58.693 47.619 10.77 0.00 31.82 2.15
103 104 2.893489 TGGATGCTAGCGACACTATCAT 59.107 45.455 10.77 0.00 39.77 2.45
104 105 4.079253 TGGATGCTAGCGACACTATCATA 58.921 43.478 10.77 0.00 37.73 2.15
105 106 4.706962 TGGATGCTAGCGACACTATCATAT 59.293 41.667 10.77 0.00 37.73 1.78
106 107 5.885912 TGGATGCTAGCGACACTATCATATA 59.114 40.000 10.77 0.00 37.73 0.86
107 108 6.183360 TGGATGCTAGCGACACTATCATATAC 60.183 42.308 10.77 0.00 37.73 1.47
108 109 5.217895 TGCTAGCGACACTATCATATACG 57.782 43.478 10.77 0.00 0.00 3.06
109 110 4.694037 TGCTAGCGACACTATCATATACGT 59.306 41.667 10.77 0.00 0.00 3.57
110 111 5.022653 GCTAGCGACACTATCATATACGTG 58.977 45.833 0.00 0.00 0.00 4.49
111 112 5.390673 GCTAGCGACACTATCATATACGTGT 60.391 44.000 0.00 0.00 42.72 4.49
112 113 4.784329 AGCGACACTATCATATACGTGTG 58.216 43.478 0.00 0.00 40.37 3.82
113 114 3.361053 GCGACACTATCATATACGTGTGC 59.639 47.826 0.00 0.00 40.37 4.57
114 115 3.912563 CGACACTATCATATACGTGTGCC 59.087 47.826 0.00 0.00 40.37 5.01
115 116 4.555906 CGACACTATCATATACGTGTGCCA 60.556 45.833 0.00 0.00 40.37 4.92
116 117 5.270893 ACACTATCATATACGTGTGCCAA 57.729 39.130 0.00 0.00 38.99 4.52
117 118 5.666462 ACACTATCATATACGTGTGCCAAA 58.334 37.500 0.00 0.00 38.99 3.28
118 119 6.110033 ACACTATCATATACGTGTGCCAAAA 58.890 36.000 0.00 0.00 38.99 2.44
119 120 6.257849 ACACTATCATATACGTGTGCCAAAAG 59.742 38.462 0.00 0.00 38.99 2.27
120 121 5.758296 ACTATCATATACGTGTGCCAAAAGG 59.242 40.000 0.00 0.00 0.00 3.11
121 122 2.680841 TCATATACGTGTGCCAAAAGGC 59.319 45.455 0.00 0.00 0.00 4.35
122 123 1.080298 TATACGTGTGCCAAAAGGCG 58.920 50.000 0.00 0.00 37.77 5.52
123 124 2.195123 ATACGTGTGCCAAAAGGCGC 62.195 55.000 12.80 12.80 44.56 6.53
127 128 3.318875 GTGCCAAAAGGCGCAAAC 58.681 55.556 10.83 0.00 43.85 2.93
128 129 2.279120 TGCCAAAAGGCGCAAACG 60.279 55.556 10.83 0.00 44.07 3.60
129 130 3.035503 GCCAAAAGGCGCAAACGG 61.036 61.111 10.83 3.45 40.57 4.44
130 131 2.415426 CCAAAAGGCGCAAACGGT 59.585 55.556 10.83 0.00 40.57 4.83
131 132 1.660264 CCAAAAGGCGCAAACGGTC 60.660 57.895 10.83 0.00 40.57 4.79
132 133 1.660264 CAAAAGGCGCAAACGGTCC 60.660 57.895 10.83 0.00 40.57 4.46
133 134 2.852180 AAAAGGCGCAAACGGTCCC 61.852 57.895 10.83 0.00 40.57 4.46
140 141 2.907917 CAAACGGTCCCGGGCAAA 60.908 61.111 18.49 0.00 44.69 3.68
141 142 2.596338 AAACGGTCCCGGGCAAAG 60.596 61.111 18.49 9.68 44.69 2.77
142 143 4.653888 AACGGTCCCGGGCAAAGG 62.654 66.667 18.49 5.40 44.69 3.11
144 145 3.708544 CGGTCCCGGGCAAAGGTA 61.709 66.667 18.49 0.00 35.56 3.08
145 146 2.758434 GGTCCCGGGCAAAGGTAA 59.242 61.111 18.49 0.00 0.00 2.85
146 147 1.378119 GGTCCCGGGCAAAGGTAAG 60.378 63.158 18.49 0.00 0.00 2.34
147 148 1.378119 GTCCCGGGCAAAGGTAAGG 60.378 63.158 18.49 0.00 0.00 2.69
148 149 2.754254 CCCGGGCAAAGGTAAGGC 60.754 66.667 8.08 0.00 0.00 4.35
149 150 3.131478 CCGGGCAAAGGTAAGGCG 61.131 66.667 0.00 0.00 0.00 5.52
150 151 2.046700 CGGGCAAAGGTAAGGCGA 60.047 61.111 0.00 0.00 0.00 5.54
151 152 2.396157 CGGGCAAAGGTAAGGCGAC 61.396 63.158 0.00 0.00 0.00 5.19
152 153 1.302993 GGGCAAAGGTAAGGCGACA 60.303 57.895 0.00 0.00 0.00 4.35
153 154 1.583495 GGGCAAAGGTAAGGCGACAC 61.583 60.000 0.00 0.00 0.00 3.67
154 155 1.583495 GGCAAAGGTAAGGCGACACC 61.583 60.000 0.00 0.00 39.61 4.16
155 156 1.583495 GCAAAGGTAAGGCGACACCC 61.583 60.000 0.00 0.00 40.58 4.61
156 157 1.004200 AAAGGTAAGGCGACACCCG 60.004 57.895 0.00 0.00 40.58 5.28
157 158 1.761500 AAAGGTAAGGCGACACCCGT 61.761 55.000 0.00 0.00 40.58 5.28
158 159 2.433664 GGTAAGGCGACACCCGTG 60.434 66.667 0.00 0.00 40.58 4.94
159 160 2.433664 GTAAGGCGACACCCGTGG 60.434 66.667 0.00 0.00 40.58 4.94
160 161 2.601067 TAAGGCGACACCCGTGGA 60.601 61.111 0.00 0.00 40.58 4.02
161 162 2.208619 TAAGGCGACACCCGTGGAA 61.209 57.895 0.00 0.00 40.58 3.53
162 163 1.756408 TAAGGCGACACCCGTGGAAA 61.756 55.000 0.00 0.00 40.58 3.13
163 164 2.359478 GGCGACACCCGTGGAAAT 60.359 61.111 0.00 0.00 41.15 2.17
164 165 1.078988 GGCGACACCCGTGGAAATA 60.079 57.895 0.00 0.00 41.15 1.40
165 166 1.363885 GGCGACACCCGTGGAAATAC 61.364 60.000 0.00 0.00 41.15 1.89
166 167 1.363885 GCGACACCCGTGGAAATACC 61.364 60.000 0.00 0.00 41.15 2.73
167 168 1.079875 CGACACCCGTGGAAATACCG 61.080 60.000 0.00 0.00 42.61 4.02
168 169 0.037046 GACACCCGTGGAAATACCGT 60.037 55.000 0.00 0.00 42.61 4.83
169 170 0.320946 ACACCCGTGGAAATACCGTG 60.321 55.000 0.00 0.00 42.61 4.94
170 171 1.376295 ACCCGTGGAAATACCGTGC 60.376 57.895 0.00 0.00 42.61 5.34
171 172 2.457778 CCCGTGGAAATACCGTGCG 61.458 63.158 0.00 0.00 42.61 5.34
172 173 1.738830 CCGTGGAAATACCGTGCGT 60.739 57.895 0.00 0.00 42.61 5.24
173 174 1.418367 CGTGGAAATACCGTGCGTG 59.582 57.895 0.00 0.00 42.61 5.34
174 175 1.009903 CGTGGAAATACCGTGCGTGA 61.010 55.000 0.00 0.00 42.61 4.35
175 176 0.719465 GTGGAAATACCGTGCGTGAG 59.281 55.000 0.00 0.00 42.61 3.51
176 177 0.390603 TGGAAATACCGTGCGTGAGG 60.391 55.000 0.00 0.00 42.61 3.86
177 178 1.702491 GGAAATACCGTGCGTGAGGC 61.702 60.000 0.00 0.00 43.96 4.70
178 179 1.702491 GAAATACCGTGCGTGAGGCC 61.702 60.000 0.00 0.00 42.61 5.19
179 180 4.508128 ATACCGTGCGTGAGGCCG 62.508 66.667 0.00 0.00 42.61 6.13
187 188 2.664851 CGTGAGGCCGCAAAGTGA 60.665 61.111 12.05 0.00 0.00 3.41
188 189 2.034879 CGTGAGGCCGCAAAGTGAT 61.035 57.895 12.05 0.00 0.00 3.06
189 190 0.739462 CGTGAGGCCGCAAAGTGATA 60.739 55.000 12.05 0.00 0.00 2.15
190 191 1.668419 GTGAGGCCGCAAAGTGATAT 58.332 50.000 12.05 0.00 0.00 1.63
191 192 1.331756 GTGAGGCCGCAAAGTGATATG 59.668 52.381 12.05 0.00 0.00 1.78
192 193 1.209261 TGAGGCCGCAAAGTGATATGA 59.791 47.619 6.75 0.00 0.00 2.15
193 194 1.869767 GAGGCCGCAAAGTGATATGAG 59.130 52.381 0.00 0.00 0.00 2.90
194 195 0.947244 GGCCGCAAAGTGATATGAGG 59.053 55.000 0.00 0.00 39.25 3.86
195 196 1.668419 GCCGCAAAGTGATATGAGGT 58.332 50.000 0.00 0.00 38.58 3.85
196 197 1.331756 GCCGCAAAGTGATATGAGGTG 59.668 52.381 0.00 0.00 38.58 4.00
197 198 2.632377 CCGCAAAGTGATATGAGGTGT 58.368 47.619 0.00 0.00 32.55 4.16
198 199 3.009723 CCGCAAAGTGATATGAGGTGTT 58.990 45.455 0.00 0.00 32.55 3.32
199 200 4.188462 CCGCAAAGTGATATGAGGTGTTA 58.812 43.478 0.00 0.00 32.55 2.41
200 201 4.034048 CCGCAAAGTGATATGAGGTGTTAC 59.966 45.833 0.00 0.00 32.55 2.50
201 202 4.629634 CGCAAAGTGATATGAGGTGTTACA 59.370 41.667 0.00 0.00 0.00 2.41
202 203 5.294306 CGCAAAGTGATATGAGGTGTTACAT 59.706 40.000 0.00 0.00 0.00 2.29
203 204 6.489675 GCAAAGTGATATGAGGTGTTACATG 58.510 40.000 0.00 0.00 0.00 3.21
204 205 6.489675 CAAAGTGATATGAGGTGTTACATGC 58.510 40.000 0.00 0.00 0.00 4.06
205 206 5.620738 AGTGATATGAGGTGTTACATGCT 57.379 39.130 0.00 0.00 0.00 3.79
206 207 6.731292 AGTGATATGAGGTGTTACATGCTA 57.269 37.500 0.00 0.00 0.00 3.49
207 208 6.753180 AGTGATATGAGGTGTTACATGCTAG 58.247 40.000 0.00 0.00 0.00 3.42
208 209 6.551227 AGTGATATGAGGTGTTACATGCTAGA 59.449 38.462 0.00 0.00 0.00 2.43
209 210 7.234371 AGTGATATGAGGTGTTACATGCTAGAT 59.766 37.037 0.00 0.00 0.00 1.98
210 211 7.543868 GTGATATGAGGTGTTACATGCTAGATC 59.456 40.741 0.00 0.00 0.00 2.75
211 212 4.307443 TGAGGTGTTACATGCTAGATCG 57.693 45.455 0.00 0.00 0.00 3.69
212 213 3.951680 TGAGGTGTTACATGCTAGATCGA 59.048 43.478 0.00 0.00 0.00 3.59
213 214 4.584743 TGAGGTGTTACATGCTAGATCGAT 59.415 41.667 0.00 0.00 0.00 3.59
214 215 4.876125 AGGTGTTACATGCTAGATCGATG 58.124 43.478 0.54 0.00 0.00 3.84
215 216 4.342378 AGGTGTTACATGCTAGATCGATGT 59.658 41.667 0.54 0.00 34.68 3.06
216 217 4.445718 GGTGTTACATGCTAGATCGATGTG 59.554 45.833 0.54 0.00 32.59 3.21
217 218 4.445718 GTGTTACATGCTAGATCGATGTGG 59.554 45.833 0.54 0.91 32.59 4.17
218 219 2.160822 ACATGCTAGATCGATGTGGC 57.839 50.000 21.82 21.82 0.00 5.01
219 220 1.413812 ACATGCTAGATCGATGTGGCA 59.586 47.619 30.60 30.60 41.44 4.92
220 221 2.038164 ACATGCTAGATCGATGTGGCAT 59.962 45.455 31.92 31.92 46.44 4.40
221 222 2.916702 TGCTAGATCGATGTGGCATT 57.083 45.000 26.29 0.00 32.82 3.56
222 223 2.486918 TGCTAGATCGATGTGGCATTG 58.513 47.619 26.29 2.21 32.82 2.82
223 224 2.102925 TGCTAGATCGATGTGGCATTGA 59.897 45.455 26.29 6.99 32.82 2.57
224 225 2.735663 GCTAGATCGATGTGGCATTGAG 59.264 50.000 23.30 4.17 0.00 3.02
225 226 2.996249 AGATCGATGTGGCATTGAGT 57.004 45.000 0.54 0.00 0.00 3.41
226 227 2.831333 AGATCGATGTGGCATTGAGTC 58.169 47.619 0.54 4.06 0.00 3.36
227 228 1.524355 GATCGATGTGGCATTGAGTCG 59.476 52.381 0.54 0.00 0.00 4.18
228 229 0.460109 TCGATGTGGCATTGAGTCGG 60.460 55.000 0.00 0.00 0.00 4.79
229 230 1.431488 CGATGTGGCATTGAGTCGGG 61.431 60.000 0.00 0.00 0.00 5.14
230 231 1.077501 ATGTGGCATTGAGTCGGGG 60.078 57.895 0.00 0.00 0.00 5.73
231 232 1.852157 ATGTGGCATTGAGTCGGGGT 61.852 55.000 0.00 0.00 0.00 4.95
232 233 1.745489 GTGGCATTGAGTCGGGGTC 60.745 63.158 0.00 0.00 0.00 4.46
233 234 2.124695 GGCATTGAGTCGGGGTCC 60.125 66.667 0.00 0.00 0.00 4.46
234 235 2.670148 GGCATTGAGTCGGGGTCCT 61.670 63.158 0.00 0.00 0.00 3.85
235 236 1.450312 GCATTGAGTCGGGGTCCTG 60.450 63.158 0.00 0.00 0.00 3.86
236 237 1.899437 GCATTGAGTCGGGGTCCTGA 61.899 60.000 0.00 0.00 0.00 3.86
242 243 4.551148 TCGGGGTCCTGACATCAA 57.449 55.556 0.00 0.00 0.00 2.57
243 244 1.980052 TCGGGGTCCTGACATCAAC 59.020 57.895 0.00 0.00 0.00 3.18
244 245 0.544357 TCGGGGTCCTGACATCAACT 60.544 55.000 0.00 0.00 0.00 3.16
245 246 0.108138 CGGGGTCCTGACATCAACTC 60.108 60.000 0.00 0.00 0.00 3.01
246 247 0.984230 GGGGTCCTGACATCAACTCA 59.016 55.000 0.00 0.00 0.00 3.41
247 248 1.351017 GGGGTCCTGACATCAACTCAA 59.649 52.381 0.00 0.00 0.00 3.02
251 252 3.560025 GGTCCTGACATCAACTCAATGGT 60.560 47.826 0.00 0.00 0.00 3.55
301 302 2.680352 ATGGAGGTGAGGCGACGT 60.680 61.111 0.00 0.00 0.00 4.34
306 307 1.935327 GAGGTGAGGCGACGTTAGCT 61.935 60.000 14.93 0.00 34.52 3.32
343 345 7.551974 AGGAGTAGAGATGACAACATGATTTTG 59.448 37.037 0.00 0.00 36.82 2.44
400 403 8.865090 TGGACCACATATAAAAGTGTCAAAATT 58.135 29.630 0.00 0.00 33.99 1.82
427 430 1.479323 TGCTACCGAAAGCCTCGTAAT 59.521 47.619 6.52 0.00 46.65 1.89
572 578 1.153369 CAGGACGTCGCCAATGGAT 60.153 57.895 9.92 0.00 0.00 3.41
580 586 3.171277 CGTCGCCAATGGATTCTTTTTC 58.829 45.455 2.05 0.00 0.00 2.29
615 624 1.754803 AGTCAAATATCTGCCGTCCGA 59.245 47.619 0.00 0.00 0.00 4.55
616 625 2.365617 AGTCAAATATCTGCCGTCCGAT 59.634 45.455 0.00 0.00 0.00 4.18
631 640 4.501571 CCGTCCGATCTCCATTAGTCATTT 60.502 45.833 0.00 0.00 0.00 2.32
664 673 1.303309 GAGCCGTCCAAATCCATCTG 58.697 55.000 0.00 0.00 0.00 2.90
837 847 1.601419 CGCCCTCCCTGTTTCGTAGA 61.601 60.000 0.00 0.00 0.00 2.59
900 910 6.289834 TCGGTTTTGAGGTATGAACTTTACA 58.710 36.000 0.00 0.00 0.00 2.41
1078 1090 7.726033 ATGGATGGATTATCTGGTACTAGTC 57.274 40.000 0.00 0.00 36.03 2.59
1083 1095 5.533903 TGGATTATCTGGTACTAGTCGAACC 59.466 44.000 0.00 1.90 0.00 3.62
1109 1121 2.010145 GCTCTGTGCATTCCGTCTTA 57.990 50.000 0.00 0.00 42.31 2.10
1136 1148 3.051940 ACTGATAAGGCTCCTCCATGA 57.948 47.619 0.00 0.00 37.29 3.07
1191 1203 7.671495 TGGTTTTACCGGAAATTTACTAGAC 57.329 36.000 9.46 0.00 42.58 2.59
1256 1268 2.350522 CATCTTGGACCTTCGTCTTGG 58.649 52.381 0.00 0.00 39.15 3.61
1337 1349 7.201920 GGAGTATCACCAAAGAACTAGCTATGA 60.202 40.741 0.00 0.00 36.25 2.15
1341 1353 6.530120 TCACCAAAGAACTAGCTATGAACAA 58.470 36.000 0.00 0.00 0.00 2.83
1347 1359 4.532521 AGAACTAGCTATGAACAAGGGTGT 59.467 41.667 0.00 0.00 40.75 4.16
1457 1475 5.068067 GGGACTAAAGGCTTTGTTGTTGTTA 59.932 40.000 22.32 0.00 0.00 2.41
1458 1476 6.239204 GGGACTAAAGGCTTTGTTGTTGTTAT 60.239 38.462 22.32 0.00 0.00 1.89
1459 1477 7.207383 GGACTAAAGGCTTTGTTGTTGTTATT 58.793 34.615 22.32 0.00 0.00 1.40
1460 1478 7.169140 GGACTAAAGGCTTTGTTGTTGTTATTG 59.831 37.037 22.32 0.00 0.00 1.90
1461 1479 7.552459 ACTAAAGGCTTTGTTGTTGTTATTGT 58.448 30.769 22.32 0.00 0.00 2.71
1462 1480 8.038351 ACTAAAGGCTTTGTTGTTGTTATTGTT 58.962 29.630 22.32 0.00 0.00 2.83
1463 1481 6.660887 AAGGCTTTGTTGTTGTTATTGTTG 57.339 33.333 0.00 0.00 0.00 3.33
1464 1482 5.729510 AGGCTTTGTTGTTGTTATTGTTGT 58.270 33.333 0.00 0.00 0.00 3.32
1465 1483 6.169800 AGGCTTTGTTGTTGTTATTGTTGTT 58.830 32.000 0.00 0.00 0.00 2.83
1472 1490 7.788055 TGTTGTTGTTATTGTTGTTGTTGTTC 58.212 30.769 0.00 0.00 0.00 3.18
1477 1495 5.795939 TGTTATTGTTGTTGTTGTTCGTCAC 59.204 36.000 0.00 0.00 0.00 3.67
1486 1504 5.813157 TGTTGTTGTTCGTCACAGAAGATTA 59.187 36.000 0.00 0.00 36.48 1.75
1631 1649 7.148490 GGCTAATAAAATGGTTGTTTGCGATTT 60.148 33.333 0.00 0.00 0.00 2.17
1662 1680 6.368791 TCACAGTACTAATGTGTCTTCATTGC 59.631 38.462 14.60 0.00 46.49 3.56
1773 1795 4.870636 TGGATTTATCTTCCCAAGCATGT 58.129 39.130 0.00 0.00 31.87 3.21
1935 1958 5.091552 AGGGTCTCCAAGTAAGTAATCACA 58.908 41.667 0.00 0.00 34.83 3.58
1950 1973 7.187824 AGTAATCACATACCATGAGTTCACT 57.812 36.000 0.00 0.00 0.00 3.41
1960 1983 6.149129 ACCATGAGTTCACTTTTTCTTTCC 57.851 37.500 0.00 0.00 0.00 3.13
1990 2013 2.101415 CTGGGCACTAATCACTCGATGA 59.899 50.000 0.00 0.00 43.13 2.92
2035 2058 1.944778 GCATTCAGCGCTCCCATAC 59.055 57.895 7.13 0.00 0.00 2.39
2121 3669 4.098044 TCTGGTTGACTTATAGGCTTCTCG 59.902 45.833 0.00 0.00 0.00 4.04
2136 3684 1.227089 CTCGATTCACCCAGGCTCG 60.227 63.158 0.00 0.00 0.00 5.03
2172 3723 4.566545 ATGTTTTTGAAGCACATCGACA 57.433 36.364 0.00 0.00 0.00 4.35
2215 3766 7.101652 TGCACAACAATCTGGTTTAGTTTTA 57.898 32.000 0.00 0.00 0.00 1.52
2265 3816 5.597813 ACATGTGCTTCTTTCTACGAAAG 57.402 39.130 0.00 9.47 0.00 2.62
2600 4154 3.115554 GTTGATTGAGTTTGTTTGCGCT 58.884 40.909 9.73 0.00 0.00 5.92
2682 4236 2.426738 GCATGTGCAACCCAAGCTATTA 59.573 45.455 0.00 0.00 41.59 0.98
2819 4373 6.037172 GTGAAAGCATTCGTATGACCAGTAAT 59.963 38.462 6.17 0.00 38.46 1.89
3363 4917 1.975407 CAGCAACTGAAGCCCCTGG 60.975 63.158 0.00 0.00 32.44 4.45
3508 5063 4.288626 TGAATGGGCCTTGTAGTTCTAGTT 59.711 41.667 4.53 0.00 0.00 2.24
3509 5064 4.929146 ATGGGCCTTGTAGTTCTAGTTT 57.071 40.909 4.53 0.00 0.00 2.66
3510 5065 6.013206 TGAATGGGCCTTGTAGTTCTAGTTTA 60.013 38.462 4.53 0.00 0.00 2.01
3590 5181 3.500448 TGTGCATCAGAGGGTTGTTTA 57.500 42.857 0.00 0.00 0.00 2.01
3600 5191 4.995487 CAGAGGGTTGTTTACCTGTCTAAC 59.005 45.833 0.00 0.00 46.86 2.34
3703 5294 4.821589 GCGGCAGGGTCTTCTCCG 62.822 72.222 0.00 0.00 42.68 4.63
3760 5351 0.596083 CACTCGATCCAGATGCGTCC 60.596 60.000 1.23 0.00 0.00 4.79
3955 5582 3.832237 CTGCAGCTTGGTCACGGGT 62.832 63.158 0.00 0.00 0.00 5.28
3956 5583 2.345991 GCAGCTTGGTCACGGGTA 59.654 61.111 0.00 0.00 0.00 3.69
4226 5866 2.590092 CTGGGGACGGTGGATTCC 59.410 66.667 0.00 0.00 0.00 3.01
4235 5875 2.750888 GGTGGATTCCGAGCGTTGC 61.751 63.158 0.00 0.00 0.00 4.17
4300 5940 4.662961 TGCTGCAGTGGGTCGTCG 62.663 66.667 16.64 0.00 0.00 5.12
4353 5993 0.250640 CTCTTCACAGCAGGCTTGGT 60.251 55.000 0.00 0.00 34.83 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.465097 GACAGGCATCCATGACCCAG 60.465 60.000 0.00 0.00 36.08 4.45
1 2 1.609239 GACAGGCATCCATGACCCA 59.391 57.895 0.00 0.00 36.08 4.51
2 3 1.152881 GGACAGGCATCCATGACCC 60.153 63.158 0.00 0.00 38.77 4.46
3 4 1.152881 GGGACAGGCATCCATGACC 60.153 63.158 9.72 0.00 40.96 4.02
4 5 1.918253 AGGGACAGGCATCCATGAC 59.082 57.895 9.72 0.00 40.96 3.06
8 9 0.982852 CCTACAGGGACAGGCATCCA 60.983 60.000 9.72 0.00 40.96 3.41
9 10 0.983378 ACCTACAGGGACAGGCATCC 60.983 60.000 0.00 0.00 40.27 3.51
10 11 0.912486 AACCTACAGGGACAGGCATC 59.088 55.000 0.00 0.00 40.27 3.91
11 12 1.004745 CAAACCTACAGGGACAGGCAT 59.995 52.381 0.00 0.00 40.27 4.40
12 13 0.400213 CAAACCTACAGGGACAGGCA 59.600 55.000 0.00 0.00 40.27 4.75
13 14 0.400594 ACAAACCTACAGGGACAGGC 59.599 55.000 0.00 0.00 40.27 4.85
14 15 1.882352 GCACAAACCTACAGGGACAGG 60.882 57.143 0.00 0.00 40.27 4.00
15 16 1.523758 GCACAAACCTACAGGGACAG 58.476 55.000 0.00 0.00 40.27 3.51
16 17 0.109723 GGCACAAACCTACAGGGACA 59.890 55.000 0.00 0.00 40.27 4.02
17 18 0.109723 TGGCACAAACCTACAGGGAC 59.890 55.000 0.00 0.00 35.21 4.46
18 19 0.109723 GTGGCACAAACCTACAGGGA 59.890 55.000 13.86 0.00 44.16 4.20
19 20 0.110486 AGTGGCACAAACCTACAGGG 59.890 55.000 21.41 0.00 44.16 4.45
20 21 1.981256 AAGTGGCACAAACCTACAGG 58.019 50.000 21.41 0.00 44.16 4.00
21 22 2.034558 CCAAAGTGGCACAAACCTACAG 59.965 50.000 21.41 0.00 44.16 2.74
22 23 2.028130 CCAAAGTGGCACAAACCTACA 58.972 47.619 21.41 0.00 44.16 2.74
23 24 1.339929 CCCAAAGTGGCACAAACCTAC 59.660 52.381 21.41 0.00 44.16 3.18
24 25 1.063567 ACCCAAAGTGGCACAAACCTA 60.064 47.619 21.41 0.00 44.16 3.08
25 26 0.325203 ACCCAAAGTGGCACAAACCT 60.325 50.000 21.41 0.00 44.16 3.50
26 27 0.539518 AACCCAAAGTGGCACAAACC 59.460 50.000 21.41 0.00 44.16 3.27
27 28 2.394930 AAACCCAAAGTGGCACAAAC 57.605 45.000 21.41 0.00 44.16 2.93
28 29 2.159226 CGTAAACCCAAAGTGGCACAAA 60.159 45.455 21.41 0.00 44.16 2.83
29 30 1.405821 CGTAAACCCAAAGTGGCACAA 59.594 47.619 21.41 0.00 44.16 3.33
30 31 1.025812 CGTAAACCCAAAGTGGCACA 58.974 50.000 21.41 0.00 35.79 4.57
31 32 1.002142 GTCGTAAACCCAAAGTGGCAC 60.002 52.381 10.29 10.29 35.79 5.01
32 33 1.134037 AGTCGTAAACCCAAAGTGGCA 60.134 47.619 0.00 0.00 35.79 4.92
33 34 1.601166 AGTCGTAAACCCAAAGTGGC 58.399 50.000 0.00 0.00 35.79 5.01
34 35 2.740447 GCTAGTCGTAAACCCAAAGTGG 59.260 50.000 0.00 0.00 37.25 4.00
35 36 2.740447 GGCTAGTCGTAAACCCAAAGTG 59.260 50.000 0.00 0.00 0.00 3.16
36 37 2.369532 TGGCTAGTCGTAAACCCAAAGT 59.630 45.455 0.00 0.00 0.00 2.66
37 38 3.048337 TGGCTAGTCGTAAACCCAAAG 57.952 47.619 0.00 0.00 0.00 2.77
38 39 3.244630 ACATGGCTAGTCGTAAACCCAAA 60.245 43.478 0.00 0.00 0.00 3.28
39 40 2.303600 ACATGGCTAGTCGTAAACCCAA 59.696 45.455 0.00 0.00 0.00 4.12
40 41 1.903860 ACATGGCTAGTCGTAAACCCA 59.096 47.619 0.00 0.00 0.00 4.51
41 42 2.093869 TGACATGGCTAGTCGTAAACCC 60.094 50.000 0.00 0.00 38.83 4.11
42 43 3.187700 CTGACATGGCTAGTCGTAAACC 58.812 50.000 0.00 0.00 38.83 3.27
43 44 2.603560 GCTGACATGGCTAGTCGTAAAC 59.396 50.000 0.00 0.00 38.83 2.01
44 45 2.418197 GGCTGACATGGCTAGTCGTAAA 60.418 50.000 0.00 0.00 38.83 2.01
45 46 1.136305 GGCTGACATGGCTAGTCGTAA 59.864 52.381 0.00 0.00 38.83 3.18
46 47 0.744874 GGCTGACATGGCTAGTCGTA 59.255 55.000 0.00 0.00 38.83 3.43
47 48 1.517832 GGCTGACATGGCTAGTCGT 59.482 57.895 0.00 0.00 38.83 4.34
48 49 1.227380 GGGCTGACATGGCTAGTCG 60.227 63.158 0.00 2.82 38.83 4.18
49 50 1.227380 CGGGCTGACATGGCTAGTC 60.227 63.158 0.00 0.00 36.55 2.59
50 51 2.735772 CCGGGCTGACATGGCTAGT 61.736 63.158 0.00 0.00 0.00 2.57
51 52 2.109799 CCGGGCTGACATGGCTAG 59.890 66.667 0.00 0.00 0.00 3.42
52 53 3.479203 CCCGGGCTGACATGGCTA 61.479 66.667 8.08 0.00 0.00 3.93
63 64 0.912486 ATATGATAAGGAGCCCGGGC 59.088 55.000 39.29 39.29 42.33 6.13
64 65 1.210478 CCATATGATAAGGAGCCCGGG 59.790 57.143 19.09 19.09 0.00 5.73
65 66 2.187958 TCCATATGATAAGGAGCCCGG 58.812 52.381 3.65 0.00 0.00 5.73
66 67 3.801698 CATCCATATGATAAGGAGCCCG 58.198 50.000 3.65 0.00 34.84 6.13
67 68 3.201708 AGCATCCATATGATAAGGAGCCC 59.798 47.826 3.65 0.00 34.84 5.19
68 69 4.500499 AGCATCCATATGATAAGGAGCC 57.500 45.455 3.65 0.00 34.84 4.70
69 70 5.055812 GCTAGCATCCATATGATAAGGAGC 58.944 45.833 10.63 6.37 33.75 4.70
70 71 5.068329 TCGCTAGCATCCATATGATAAGGAG 59.932 44.000 16.45 0.00 33.75 3.69
71 72 4.956075 TCGCTAGCATCCATATGATAAGGA 59.044 41.667 16.45 0.00 33.75 3.36
72 73 5.046529 GTCGCTAGCATCCATATGATAAGG 58.953 45.833 16.45 0.00 33.75 2.69
73 74 5.518128 GTGTCGCTAGCATCCATATGATAAG 59.482 44.000 16.45 0.00 33.75 1.73
74 75 5.185828 AGTGTCGCTAGCATCCATATGATAA 59.814 40.000 16.45 0.00 33.75 1.75
75 76 4.706962 AGTGTCGCTAGCATCCATATGATA 59.293 41.667 16.45 0.00 34.84 2.15
76 77 3.513119 AGTGTCGCTAGCATCCATATGAT 59.487 43.478 16.45 0.00 34.84 2.45
77 78 2.893489 AGTGTCGCTAGCATCCATATGA 59.107 45.455 16.45 0.00 34.84 2.15
78 79 3.309961 AGTGTCGCTAGCATCCATATG 57.690 47.619 16.45 0.00 36.09 1.78
79 80 4.706962 TGATAGTGTCGCTAGCATCCATAT 59.293 41.667 16.45 6.97 40.72 1.78
80 81 4.079253 TGATAGTGTCGCTAGCATCCATA 58.921 43.478 16.45 1.98 40.72 2.74
81 82 2.893489 TGATAGTGTCGCTAGCATCCAT 59.107 45.455 16.45 0.00 40.72 3.41
82 83 2.306847 TGATAGTGTCGCTAGCATCCA 58.693 47.619 16.45 4.65 40.72 3.41
87 88 5.022653 CACGTATATGATAGTGTCGCTAGC 58.977 45.833 4.06 4.06 36.67 3.42
88 89 6.016111 CACACGTATATGATAGTGTCGCTAG 58.984 44.000 0.00 0.00 44.83 3.42
89 90 5.616204 GCACACGTATATGATAGTGTCGCTA 60.616 44.000 0.00 0.00 44.83 4.26
90 91 4.784329 CACACGTATATGATAGTGTCGCT 58.216 43.478 0.00 0.00 44.83 4.93
91 92 3.361053 GCACACGTATATGATAGTGTCGC 59.639 47.826 0.00 2.56 44.83 5.19
92 93 3.912563 GGCACACGTATATGATAGTGTCG 59.087 47.826 0.00 0.00 44.83 4.35
93 94 4.866921 TGGCACACGTATATGATAGTGTC 58.133 43.478 0.00 6.75 44.83 3.67
95 96 6.292865 CCTTTTGGCACACGTATATGATAGTG 60.293 42.308 0.00 5.89 39.29 2.74
96 97 5.758296 CCTTTTGGCACACGTATATGATAGT 59.242 40.000 0.00 0.00 39.29 2.12
97 98 6.228273 CCTTTTGGCACACGTATATGATAG 57.772 41.667 0.00 0.00 39.29 2.08
113 114 1.660264 GACCGTTTGCGCCTTTTGG 60.660 57.895 4.18 2.72 44.18 3.28
114 115 1.660264 GGACCGTTTGCGCCTTTTG 60.660 57.895 4.18 0.00 36.67 2.44
115 116 2.725641 GGACCGTTTGCGCCTTTT 59.274 55.556 4.18 0.00 36.67 2.27
116 117 3.292159 GGGACCGTTTGCGCCTTT 61.292 61.111 4.18 0.00 36.67 3.11
123 124 2.907917 TTTGCCCGGGACCGTTTG 60.908 61.111 29.31 0.00 37.81 2.93
124 125 2.596338 CTTTGCCCGGGACCGTTT 60.596 61.111 29.31 0.00 37.81 3.60
125 126 4.653888 CCTTTGCCCGGGACCGTT 62.654 66.667 29.31 0.00 37.81 4.44
127 128 3.256824 TTACCTTTGCCCGGGACCG 62.257 63.158 29.31 8.74 39.44 4.79
128 129 1.378119 CTTACCTTTGCCCGGGACC 60.378 63.158 29.31 8.20 0.00 4.46
129 130 1.378119 CCTTACCTTTGCCCGGGAC 60.378 63.158 29.31 16.95 0.00 4.46
130 131 3.083386 CCTTACCTTTGCCCGGGA 58.917 61.111 29.31 6.60 0.00 5.14
131 132 2.754254 GCCTTACCTTTGCCCGGG 60.754 66.667 19.09 19.09 0.00 5.73
132 133 3.131478 CGCCTTACCTTTGCCCGG 61.131 66.667 0.00 0.00 0.00 5.73
133 134 2.046700 TCGCCTTACCTTTGCCCG 60.047 61.111 0.00 0.00 0.00 6.13
134 135 1.302993 TGTCGCCTTACCTTTGCCC 60.303 57.895 0.00 0.00 0.00 5.36
135 136 1.583495 GGTGTCGCCTTACCTTTGCC 61.583 60.000 0.00 0.00 34.11 4.52
136 137 1.583495 GGGTGTCGCCTTACCTTTGC 61.583 60.000 1.66 0.00 37.15 3.68
137 138 1.296056 CGGGTGTCGCCTTACCTTTG 61.296 60.000 1.66 0.00 37.15 2.77
138 139 1.004200 CGGGTGTCGCCTTACCTTT 60.004 57.895 1.66 0.00 37.15 3.11
139 140 2.212110 ACGGGTGTCGCCTTACCTT 61.212 57.895 1.66 0.00 43.89 3.50
140 141 2.602568 ACGGGTGTCGCCTTACCT 60.603 61.111 1.66 0.00 43.89 3.08
141 142 2.433664 CACGGGTGTCGCCTTACC 60.434 66.667 1.66 0.00 43.89 2.85
142 143 2.433664 CCACGGGTGTCGCCTTAC 60.434 66.667 1.66 0.00 43.89 2.34
143 144 1.756408 TTTCCACGGGTGTCGCCTTA 61.756 55.000 1.66 0.00 43.89 2.69
144 145 2.406002 ATTTCCACGGGTGTCGCCTT 62.406 55.000 1.66 0.00 43.89 4.35
145 146 1.546589 TATTTCCACGGGTGTCGCCT 61.547 55.000 1.66 0.00 43.89 5.52
146 147 1.078988 TATTTCCACGGGTGTCGCC 60.079 57.895 0.00 0.00 43.89 5.54
147 148 1.363885 GGTATTTCCACGGGTGTCGC 61.364 60.000 0.00 0.00 43.89 5.19
148 149 1.079875 CGGTATTTCCACGGGTGTCG 61.080 60.000 0.00 0.00 45.88 4.35
149 150 0.037046 ACGGTATTTCCACGGGTGTC 60.037 55.000 0.00 0.00 35.57 3.67
150 151 0.320946 CACGGTATTTCCACGGGTGT 60.321 55.000 0.00 0.00 35.57 4.16
151 152 1.641123 GCACGGTATTTCCACGGGTG 61.641 60.000 0.00 0.00 35.57 4.61
152 153 1.376295 GCACGGTATTTCCACGGGT 60.376 57.895 0.00 0.00 35.57 5.28
153 154 2.457778 CGCACGGTATTTCCACGGG 61.458 63.158 0.00 0.00 35.57 5.28
154 155 1.738830 ACGCACGGTATTTCCACGG 60.739 57.895 0.00 0.00 35.57 4.94
155 156 1.009903 TCACGCACGGTATTTCCACG 61.010 55.000 0.00 0.00 35.57 4.94
156 157 0.719465 CTCACGCACGGTATTTCCAC 59.281 55.000 0.00 0.00 35.57 4.02
157 158 0.390603 CCTCACGCACGGTATTTCCA 60.391 55.000 0.00 0.00 35.57 3.53
158 159 1.702491 GCCTCACGCACGGTATTTCC 61.702 60.000 0.00 0.00 37.47 3.13
159 160 1.702491 GGCCTCACGCACGGTATTTC 61.702 60.000 0.00 0.00 40.31 2.17
160 161 1.743995 GGCCTCACGCACGGTATTT 60.744 57.895 0.00 0.00 40.31 1.40
161 162 2.125269 GGCCTCACGCACGGTATT 60.125 61.111 0.00 0.00 40.31 1.89
162 163 4.508128 CGGCCTCACGCACGGTAT 62.508 66.667 0.00 0.00 40.31 2.73
170 171 0.739462 TATCACTTTGCGGCCTCACG 60.739 55.000 0.00 0.00 0.00 4.35
171 172 1.331756 CATATCACTTTGCGGCCTCAC 59.668 52.381 0.00 0.00 0.00 3.51
172 173 1.209261 TCATATCACTTTGCGGCCTCA 59.791 47.619 0.00 0.00 0.00 3.86
173 174 1.869767 CTCATATCACTTTGCGGCCTC 59.130 52.381 0.00 0.00 0.00 4.70
174 175 1.475751 CCTCATATCACTTTGCGGCCT 60.476 52.381 0.00 0.00 0.00 5.19
175 176 0.947244 CCTCATATCACTTTGCGGCC 59.053 55.000 0.00 0.00 0.00 6.13
176 177 1.331756 CACCTCATATCACTTTGCGGC 59.668 52.381 0.00 0.00 0.00 6.53
177 178 2.632377 ACACCTCATATCACTTTGCGG 58.368 47.619 0.00 0.00 0.00 5.69
178 179 4.629634 TGTAACACCTCATATCACTTTGCG 59.370 41.667 0.00 0.00 0.00 4.85
179 180 6.489675 CATGTAACACCTCATATCACTTTGC 58.510 40.000 0.00 0.00 0.00 3.68
180 181 6.317140 AGCATGTAACACCTCATATCACTTTG 59.683 38.462 0.00 0.00 0.00 2.77
181 182 6.418101 AGCATGTAACACCTCATATCACTTT 58.582 36.000 0.00 0.00 0.00 2.66
182 183 5.994250 AGCATGTAACACCTCATATCACTT 58.006 37.500 0.00 0.00 0.00 3.16
183 184 5.620738 AGCATGTAACACCTCATATCACT 57.379 39.130 0.00 0.00 0.00 3.41
184 185 6.749139 TCTAGCATGTAACACCTCATATCAC 58.251 40.000 0.00 0.00 0.00 3.06
185 186 6.976934 TCTAGCATGTAACACCTCATATCA 57.023 37.500 0.00 0.00 0.00 2.15
186 187 6.749578 CGATCTAGCATGTAACACCTCATATC 59.250 42.308 0.00 0.00 0.00 1.63
187 188 6.434340 TCGATCTAGCATGTAACACCTCATAT 59.566 38.462 0.00 0.00 0.00 1.78
188 189 5.768164 TCGATCTAGCATGTAACACCTCATA 59.232 40.000 0.00 0.00 0.00 2.15
189 190 4.584743 TCGATCTAGCATGTAACACCTCAT 59.415 41.667 0.00 0.00 0.00 2.90
190 191 3.951680 TCGATCTAGCATGTAACACCTCA 59.048 43.478 0.00 0.00 0.00 3.86
191 192 4.569761 TCGATCTAGCATGTAACACCTC 57.430 45.455 0.00 0.00 0.00 3.85
192 193 4.342378 ACATCGATCTAGCATGTAACACCT 59.658 41.667 0.00 0.00 0.00 4.00
193 194 4.445718 CACATCGATCTAGCATGTAACACC 59.554 45.833 0.00 0.00 0.00 4.16
194 195 4.445718 CCACATCGATCTAGCATGTAACAC 59.554 45.833 0.00 0.00 0.00 3.32
195 196 4.620982 CCACATCGATCTAGCATGTAACA 58.379 43.478 0.00 0.00 0.00 2.41
196 197 3.430218 GCCACATCGATCTAGCATGTAAC 59.570 47.826 0.00 0.00 0.00 2.50
197 198 3.069443 TGCCACATCGATCTAGCATGTAA 59.931 43.478 8.31 0.00 0.00 2.41
198 199 2.627699 TGCCACATCGATCTAGCATGTA 59.372 45.455 8.31 0.00 0.00 2.29
199 200 1.413812 TGCCACATCGATCTAGCATGT 59.586 47.619 8.31 0.00 0.00 3.21
200 201 2.159327 TGCCACATCGATCTAGCATG 57.841 50.000 8.31 0.00 0.00 4.06
201 202 3.072211 CAATGCCACATCGATCTAGCAT 58.928 45.455 16.08 16.08 42.44 3.79
202 203 2.102925 TCAATGCCACATCGATCTAGCA 59.897 45.455 13.38 13.38 34.28 3.49
203 204 2.735663 CTCAATGCCACATCGATCTAGC 59.264 50.000 0.00 0.00 0.00 3.42
204 205 3.986572 GACTCAATGCCACATCGATCTAG 59.013 47.826 0.00 0.00 0.00 2.43
205 206 3.550842 CGACTCAATGCCACATCGATCTA 60.551 47.826 0.00 0.00 0.00 1.98
206 207 2.800985 CGACTCAATGCCACATCGATCT 60.801 50.000 0.00 0.00 0.00 2.75
207 208 1.524355 CGACTCAATGCCACATCGATC 59.476 52.381 0.00 0.00 0.00 3.69
208 209 1.575244 CGACTCAATGCCACATCGAT 58.425 50.000 0.00 0.00 0.00 3.59
209 210 0.460109 CCGACTCAATGCCACATCGA 60.460 55.000 0.00 0.00 0.00 3.59
210 211 1.431488 CCCGACTCAATGCCACATCG 61.431 60.000 0.00 0.00 0.00 3.84
211 212 1.097547 CCCCGACTCAATGCCACATC 61.098 60.000 0.00 0.00 0.00 3.06
212 213 1.077501 CCCCGACTCAATGCCACAT 60.078 57.895 0.00 0.00 0.00 3.21
213 214 2.350895 CCCCGACTCAATGCCACA 59.649 61.111 0.00 0.00 0.00 4.17
214 215 1.745489 GACCCCGACTCAATGCCAC 60.745 63.158 0.00 0.00 0.00 5.01
215 216 2.668632 GACCCCGACTCAATGCCA 59.331 61.111 0.00 0.00 0.00 4.92
216 217 2.124695 GGACCCCGACTCAATGCC 60.125 66.667 0.00 0.00 0.00 4.40
217 218 1.450312 CAGGACCCCGACTCAATGC 60.450 63.158 0.00 0.00 0.00 3.56
218 219 0.108138 GTCAGGACCCCGACTCAATG 60.108 60.000 4.70 0.00 0.00 2.82
219 220 0.544357 TGTCAGGACCCCGACTCAAT 60.544 55.000 11.80 0.00 31.80 2.57
220 221 0.544357 ATGTCAGGACCCCGACTCAA 60.544 55.000 11.80 0.00 31.80 3.02
221 222 0.970937 GATGTCAGGACCCCGACTCA 60.971 60.000 11.80 0.00 31.80 3.41
222 223 0.970937 TGATGTCAGGACCCCGACTC 60.971 60.000 11.80 8.04 31.80 3.36
223 224 0.544357 TTGATGTCAGGACCCCGACT 60.544 55.000 11.80 0.06 31.80 4.18
224 225 0.391263 GTTGATGTCAGGACCCCGAC 60.391 60.000 4.95 4.95 0.00 4.79
225 226 0.544357 AGTTGATGTCAGGACCCCGA 60.544 55.000 0.00 0.00 0.00 5.14
226 227 0.108138 GAGTTGATGTCAGGACCCCG 60.108 60.000 0.00 0.00 0.00 5.73
227 228 0.984230 TGAGTTGATGTCAGGACCCC 59.016 55.000 0.00 0.00 0.00 4.95
228 229 2.859165 TTGAGTTGATGTCAGGACCC 57.141 50.000 0.00 0.00 0.00 4.46
229 230 3.012518 CCATTGAGTTGATGTCAGGACC 58.987 50.000 0.00 0.00 0.00 4.46
230 231 3.679389 ACCATTGAGTTGATGTCAGGAC 58.321 45.455 0.00 0.00 0.00 3.85
231 232 4.371624 AACCATTGAGTTGATGTCAGGA 57.628 40.909 0.00 0.00 0.00 3.86
240 241 8.649025 TACTCCTAAAGTGCAACCATTGAGTTG 61.649 40.741 11.01 11.43 43.19 3.16
241 242 4.469657 TCCTAAAGTGCAACCATTGAGTT 58.530 39.130 0.00 0.00 37.80 3.01
242 243 4.074970 CTCCTAAAGTGCAACCATTGAGT 58.925 43.478 0.00 0.00 37.80 3.41
243 244 4.074970 ACTCCTAAAGTGCAACCATTGAG 58.925 43.478 0.00 0.00 37.80 3.02
244 245 4.098914 ACTCCTAAAGTGCAACCATTGA 57.901 40.909 0.00 0.00 37.80 2.57
245 246 5.245531 TCTACTCCTAAAGTGCAACCATTG 58.754 41.667 0.00 0.00 39.11 2.82
246 247 5.248477 TCTCTACTCCTAAAGTGCAACCATT 59.752 40.000 0.00 0.00 39.11 3.16
247 248 4.777896 TCTCTACTCCTAAAGTGCAACCAT 59.222 41.667 0.00 0.00 39.11 3.55
278 279 0.178767 CGCCTCACCTCCATCAATCA 59.821 55.000 0.00 0.00 0.00 2.57
306 307 2.511218 TCTCTACTCCTAAAGGGGCGTA 59.489 50.000 0.00 0.00 40.10 4.42
343 345 4.893424 TGCTGAGTGAAAACAGGTAAAC 57.107 40.909 0.00 0.00 35.05 2.01
347 349 5.769662 TCAATTATGCTGAGTGAAAACAGGT 59.230 36.000 0.00 0.00 35.05 4.00
400 403 1.003851 GCTTTCGGTAGCATGCGTAA 58.996 50.000 13.01 0.00 40.89 3.18
455 458 9.865321 AATATTCAGGAAAAACAATCATGAGTG 57.135 29.630 20.95 20.95 38.64 3.51
487 492 8.422577 AAGGAAGCCTGAAGTTTATTTGTATT 57.577 30.769 0.00 0.00 32.13 1.89
615 624 4.524802 TGGCCAAATGACTAATGGAGAT 57.475 40.909 0.61 0.00 36.27 2.75
616 625 4.314522 TTGGCCAAATGACTAATGGAGA 57.685 40.909 17.98 0.00 36.27 3.71
664 673 4.459089 GCCGTGGAGGTCTGGAGC 62.459 72.222 0.00 0.00 43.70 4.70
830 840 3.981051 AGAGCAGGGACTCTACGAA 57.019 52.632 0.00 0.00 45.25 3.85
837 847 1.306568 GGGGAAGAGAGCAGGGACT 60.307 63.158 0.00 0.00 43.88 3.85
900 910 5.440610 GGGATTGAAGTAATCACTGGATGT 58.559 41.667 0.00 0.00 44.27 3.06
1078 1090 0.588252 CACAGAGCAAACCTGGTTCG 59.412 55.000 13.36 2.12 36.03 3.95
1109 1121 1.755380 GGAGCCTTATCAGTACACCGT 59.245 52.381 0.00 0.00 0.00 4.83
1136 1148 3.110705 AGCACCAGTGAGGACTAATGAT 58.889 45.455 0.99 0.00 41.22 2.45
1191 1203 2.549064 TTCTGGCATATCCATCCACG 57.451 50.000 0.00 0.00 45.50 4.94
1305 1317 4.503714 TCTTTGGTGATACTCCAATCCC 57.496 45.455 6.20 0.00 43.25 3.85
1337 1349 2.495669 CAAACTTCCACACACCCTTGTT 59.504 45.455 0.00 0.00 31.66 2.83
1341 1353 0.258774 AGCAAACTTCCACACACCCT 59.741 50.000 0.00 0.00 0.00 4.34
1347 1359 3.758023 CACATGGATAGCAAACTTCCACA 59.242 43.478 0.00 0.00 42.09 4.17
1457 1475 4.155099 TCTGTGACGAACAACAACAACAAT 59.845 37.500 0.00 0.00 38.67 2.71
1458 1476 3.498777 TCTGTGACGAACAACAACAACAA 59.501 39.130 0.00 0.00 38.67 2.83
1459 1477 3.067833 TCTGTGACGAACAACAACAACA 58.932 40.909 0.00 0.00 38.67 3.33
1460 1478 3.733024 TCTGTGACGAACAACAACAAC 57.267 42.857 0.00 0.00 38.67 3.32
1461 1479 3.997681 TCTTCTGTGACGAACAACAACAA 59.002 39.130 0.00 0.00 38.67 2.83
1462 1480 3.591023 TCTTCTGTGACGAACAACAACA 58.409 40.909 0.00 0.00 38.67 3.33
1463 1481 4.795970 ATCTTCTGTGACGAACAACAAC 57.204 40.909 0.00 0.00 38.67 3.32
1464 1482 6.759356 TCTTAATCTTCTGTGACGAACAACAA 59.241 34.615 0.00 0.00 38.67 2.83
1465 1483 6.200286 GTCTTAATCTTCTGTGACGAACAACA 59.800 38.462 0.00 0.00 38.67 3.33
1472 1490 5.445142 GCACATGTCTTAATCTTCTGTGACG 60.445 44.000 0.00 0.00 35.67 4.35
1477 1495 5.410746 ACACTGCACATGTCTTAATCTTCTG 59.589 40.000 0.00 0.00 0.00 3.02
1486 1504 1.230635 GGCGACACTGCACATGTCTT 61.231 55.000 19.28 0.00 43.60 3.01
1685 1703 9.601217 GGAATCAATACACACTTGAGTAAGTAT 57.399 33.333 0.00 3.29 45.12 2.12
1821 1843 4.936891 TCTTTCTTGGAAAAGAGCAAAGC 58.063 39.130 0.00 0.00 39.67 3.51
1935 1958 7.725844 AGGAAAGAAAAAGTGAACTCATGGTAT 59.274 33.333 0.00 0.00 0.00 2.73
1950 1973 4.827284 CCCAGCTGACTTAGGAAAGAAAAA 59.173 41.667 17.39 0.00 36.50 1.94
1960 1983 3.118629 TGATTAGTGCCCAGCTGACTTAG 60.119 47.826 17.39 0.00 0.00 2.18
2121 3669 0.960364 TTTGCGAGCCTGGGTGAATC 60.960 55.000 1.59 0.00 0.00 2.52
2215 3766 6.567602 ACCAGAAACAGATTATTAGCTCCT 57.432 37.500 0.00 0.00 0.00 3.69
2265 3816 8.980481 TGAGGAGGTATAAAAAGATTTCCATC 57.020 34.615 0.00 0.00 0.00 3.51
2600 4154 2.455674 ACTGATGCAGAGTAAACGCA 57.544 45.000 0.82 0.00 40.50 5.24
2682 4236 6.261826 CCAGAAGAGTTCAACAGAACAGAAAT 59.738 38.462 10.56 0.00 43.18 2.17
2846 4400 3.334583 TCCTTGGATTTCTGTTCCTCG 57.665 47.619 0.00 0.00 34.17 4.63
3363 4917 5.172205 AGAATTCTGTTTCGCCTTCTCTAC 58.828 41.667 7.30 0.00 0.00 2.59
3508 5063 7.994425 TGAATGTTTTAAGATCTGCCTGTAA 57.006 32.000 0.00 0.00 0.00 2.41
3509 5064 7.611467 ACATGAATGTTTTAAGATCTGCCTGTA 59.389 33.333 0.00 0.00 37.90 2.74
3510 5065 6.435277 ACATGAATGTTTTAAGATCTGCCTGT 59.565 34.615 0.00 0.00 37.90 4.00
3590 5181 2.303311 GCTTGGGAAGAGTTAGACAGGT 59.697 50.000 0.00 0.00 0.00 4.00
3600 5191 3.130160 GGCGCTGCTTGGGAAGAG 61.130 66.667 7.64 0.00 0.00 2.85
3691 5282 2.035940 AGCGACGGAGAAGACCCT 59.964 61.111 0.00 0.00 0.00 4.34
3742 5333 1.736586 GGACGCATCTGGATCGAGT 59.263 57.895 4.53 0.00 0.00 4.18
3810 5401 1.085091 CACAGCATCACCAGAGAAGC 58.915 55.000 0.00 0.00 0.00 3.86
3817 5408 2.282391 GCCACCACAGCATCACCA 60.282 61.111 0.00 0.00 0.00 4.17
3819 5410 3.434319 CCGCCACCACAGCATCAC 61.434 66.667 0.00 0.00 0.00 3.06
3846 5437 1.134946 CTGGCCAAATCCGACCAAATC 59.865 52.381 7.01 0.00 0.00 2.17
3857 5448 0.749454 GCTCGTGGATCTGGCCAAAT 60.749 55.000 7.01 0.00 40.20 2.32
3860 5451 3.002583 TGCTCGTGGATCTGGCCA 61.003 61.111 4.71 4.71 35.02 5.36
3935 5562 3.730761 CGTGACCAAGCTGCAGCC 61.731 66.667 34.39 19.29 43.38 4.85
3941 5568 2.955881 GCCTACCCGTGACCAAGCT 61.956 63.158 0.00 0.00 0.00 3.74
3950 5577 3.998672 CCACACGTGCCTACCCGT 61.999 66.667 17.22 0.00 37.90 5.28
4235 5875 4.227134 CAGGGTCAGATCCGCGGG 62.227 72.222 27.83 9.38 0.00 6.13
4304 5944 4.722700 TCAGCCGCCAAAGCCCTC 62.723 66.667 0.00 0.00 34.57 4.30
4320 5960 2.545165 GAAGAGCACCTCCCGTCGTC 62.545 65.000 0.00 0.00 0.00 4.20
4353 5993 0.979187 GGATACCCAGACCACCGGAA 60.979 60.000 9.46 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.