Multiple sequence alignment - TraesCS6A01G145100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G145100 chr6A 100.000 4317 0 0 1 4317 122698808 122694492 0.000000e+00 7973.0
1 TraesCS6A01G145100 chr6A 95.588 136 6 0 3518 3653 7299902 7299767 7.270000e-53 219.0
2 TraesCS6A01G145100 chr6B 92.395 2380 110 30 1140 3476 186707637 186705286 0.000000e+00 3326.0
3 TraesCS6A01G145100 chr6B 88.071 788 47 22 371 1139 186708426 186707667 0.000000e+00 891.0
4 TraesCS6A01G145100 chr6B 87.500 208 18 4 177 380 186708975 186708772 2.600000e-57 233.0
5 TraesCS6A01G145100 chr6D 91.307 1898 92 35 177 2033 101759734 101757869 0.000000e+00 2523.0
6 TraesCS6A01G145100 chr6D 95.050 1394 45 9 2084 3476 101757775 101756405 0.000000e+00 2170.0
7 TraesCS6A01G145100 chr6D 86.024 415 46 10 3902 4314 101754261 101753857 6.630000e-118 435.0
8 TraesCS6A01G145100 chr6D 95.833 48 1 1 3475 3521 101756385 101756338 4.630000e-10 76.8
9 TraesCS6A01G145100 chr1B 95.683 139 6 0 3513 3651 176763609 176763747 1.560000e-54 224.0
10 TraesCS6A01G145100 chr4B 94.326 141 8 0 3511 3651 403331404 403331544 2.610000e-52 217.0
11 TraesCS6A01G145100 chr7B 96.183 131 5 0 3521 3651 370814020 370814150 9.400000e-52 215.0
12 TraesCS6A01G145100 chr5A 96.183 131 5 0 3521 3651 32938071 32937941 9.400000e-52 215.0
13 TraesCS6A01G145100 chr5A 96.183 131 5 0 3521 3651 546507632 546507762 9.400000e-52 215.0
14 TraesCS6A01G145100 chr1A 95.556 135 5 1 3518 3651 498160907 498161041 9.400000e-52 215.0
15 TraesCS6A01G145100 chr1A 94.853 136 7 0 3518 3653 549244555 549244690 3.380000e-51 213.0
16 TraesCS6A01G145100 chr7A 94.203 138 8 0 3518 3655 681028306 681028443 1.220000e-50 211.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G145100 chr6A 122694492 122698808 4316 True 7973.000000 7973 100.0000 1 4317 1 chr6A.!!$R2 4316
1 TraesCS6A01G145100 chr6B 186705286 186708975 3689 True 1483.333333 3326 89.3220 177 3476 3 chr6B.!!$R1 3299
2 TraesCS6A01G145100 chr6D 101753857 101759734 5877 True 1301.200000 2523 92.0535 177 4314 4 chr6D.!!$R1 4137

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.027979 CGCATAACTTGGCCGACATG 59.972 55.0 0.00 0.0 0.00 3.21 F
27 28 0.036164 TAACTTGGCCGACATGCTGT 59.964 50.0 0.00 0.0 0.00 4.40 F
146 147 0.648441 TAATAAAGCGCGCCGTGAAG 59.352 50.0 30.33 0.0 0.00 3.02 F
304 314 0.903454 ACCCCACGTCTCCGATTTCT 60.903 55.0 0.00 0.0 37.88 2.52 F
2185 2665 0.181114 AGCAGCACTGGTCACTGAAA 59.819 50.0 0.00 0.0 36.44 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1638 2073 0.961358 CTCGTGGAAGAGGAGACGGT 60.961 60.000 0.00 0.0 38.64 4.83 R
1643 2078 1.248486 TGTGACTCGTGGAAGAGGAG 58.752 55.000 0.00 0.0 42.31 3.69 R
2076 2534 0.588252 CGGCAGCGAATTAATCAGGG 59.412 55.000 0.00 0.0 0.00 4.45 R
2249 2729 1.522806 ACGCCGAGAACACTGCAAA 60.523 52.632 0.00 0.0 0.00 3.68 R
4173 6551 0.032403 GCAGGAAGCAATGCAACACA 59.968 50.000 8.35 0.0 44.79 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.525221 ATGGCGCATAACTTGGCC 58.475 55.556 10.83 0.00 40.28 5.36
18 19 2.480610 ATGGCGCATAACTTGGCCG 61.481 57.895 10.83 0.00 41.80 6.13
19 20 2.822255 GGCGCATAACTTGGCCGA 60.822 61.111 10.83 0.00 33.73 5.54
20 21 2.403586 GCGCATAACTTGGCCGAC 59.596 61.111 0.30 0.00 0.00 4.79
21 22 2.395360 GCGCATAACTTGGCCGACA 61.395 57.895 0.30 0.00 0.00 4.35
22 23 1.714899 GCGCATAACTTGGCCGACAT 61.715 55.000 0.30 0.00 0.00 3.06
23 24 0.027979 CGCATAACTTGGCCGACATG 59.972 55.000 0.00 0.00 0.00 3.21
24 25 0.248621 GCATAACTTGGCCGACATGC 60.249 55.000 11.78 11.78 32.84 4.06
25 26 1.382522 CATAACTTGGCCGACATGCT 58.617 50.000 0.00 0.00 0.00 3.79
26 27 1.064505 CATAACTTGGCCGACATGCTG 59.935 52.381 0.00 0.00 0.00 4.41
27 28 0.036164 TAACTTGGCCGACATGCTGT 59.964 50.000 0.00 0.00 0.00 4.40
28 29 1.237285 AACTTGGCCGACATGCTGTC 61.237 55.000 0.00 6.31 43.65 3.51
41 42 6.104439 GACATGCTGTCAGTTCTAATTCTG 57.896 41.667 0.93 0.00 46.22 3.02
42 43 4.394300 ACATGCTGTCAGTTCTAATTCTGC 59.606 41.667 0.93 0.00 0.00 4.26
43 44 4.277515 TGCTGTCAGTTCTAATTCTGCT 57.722 40.909 0.93 0.00 0.00 4.24
44 45 4.645535 TGCTGTCAGTTCTAATTCTGCTT 58.354 39.130 0.93 0.00 0.00 3.91
45 46 4.453478 TGCTGTCAGTTCTAATTCTGCTTG 59.547 41.667 0.93 0.00 0.00 4.01
46 47 4.142730 GCTGTCAGTTCTAATTCTGCTTGG 60.143 45.833 0.93 0.00 0.00 3.61
47 48 5.227569 TGTCAGTTCTAATTCTGCTTGGA 57.772 39.130 0.00 0.00 0.00 3.53
48 49 5.240891 TGTCAGTTCTAATTCTGCTTGGAG 58.759 41.667 0.00 0.00 0.00 3.86
49 50 5.221722 TGTCAGTTCTAATTCTGCTTGGAGT 60.222 40.000 0.00 0.00 0.00 3.85
50 51 6.014584 TGTCAGTTCTAATTCTGCTTGGAGTA 60.015 38.462 0.00 0.00 0.00 2.59
51 52 7.044798 GTCAGTTCTAATTCTGCTTGGAGTAT 58.955 38.462 0.00 0.00 0.00 2.12
52 53 7.550906 GTCAGTTCTAATTCTGCTTGGAGTATT 59.449 37.037 0.65 0.65 0.00 1.89
53 54 8.103305 TCAGTTCTAATTCTGCTTGGAGTATTT 58.897 33.333 0.26 0.00 0.00 1.40
54 55 8.734386 CAGTTCTAATTCTGCTTGGAGTATTTT 58.266 33.333 0.26 0.00 0.00 1.82
55 56 9.301897 AGTTCTAATTCTGCTTGGAGTATTTTT 57.698 29.630 0.26 0.00 0.00 1.94
56 57 9.346725 GTTCTAATTCTGCTTGGAGTATTTTTG 57.653 33.333 0.26 0.00 0.00 2.44
57 58 8.055279 TCTAATTCTGCTTGGAGTATTTTTGG 57.945 34.615 0.26 0.00 0.00 3.28
58 59 5.665916 ATTCTGCTTGGAGTATTTTTGGG 57.334 39.130 0.00 0.00 0.00 4.12
59 60 4.380843 TCTGCTTGGAGTATTTTTGGGA 57.619 40.909 0.00 0.00 0.00 4.37
60 61 4.934356 TCTGCTTGGAGTATTTTTGGGAT 58.066 39.130 0.00 0.00 0.00 3.85
61 62 4.706476 TCTGCTTGGAGTATTTTTGGGATG 59.294 41.667 0.00 0.00 0.00 3.51
62 63 4.671831 TGCTTGGAGTATTTTTGGGATGA 58.328 39.130 0.00 0.00 0.00 2.92
63 64 5.271598 TGCTTGGAGTATTTTTGGGATGAT 58.728 37.500 0.00 0.00 0.00 2.45
64 65 6.430864 TGCTTGGAGTATTTTTGGGATGATA 58.569 36.000 0.00 0.00 0.00 2.15
65 66 7.068702 TGCTTGGAGTATTTTTGGGATGATAT 58.931 34.615 0.00 0.00 0.00 1.63
66 67 7.564660 TGCTTGGAGTATTTTTGGGATGATATT 59.435 33.333 0.00 0.00 0.00 1.28
67 68 8.084684 GCTTGGAGTATTTTTGGGATGATATTC 58.915 37.037 0.00 0.00 0.00 1.75
68 69 9.135189 CTTGGAGTATTTTTGGGATGATATTCA 57.865 33.333 0.00 0.00 0.00 2.57
69 70 9.486123 TTGGAGTATTTTTGGGATGATATTCAA 57.514 29.630 0.00 0.00 0.00 2.69
70 71 8.912988 TGGAGTATTTTTGGGATGATATTCAAC 58.087 33.333 0.00 0.00 0.00 3.18
71 72 8.360390 GGAGTATTTTTGGGATGATATTCAACC 58.640 37.037 0.00 0.00 38.46 3.77
81 82 7.530426 GGATGATATTCAACCCAGCTTTATT 57.470 36.000 0.00 0.00 33.69 1.40
82 83 7.373493 GGATGATATTCAACCCAGCTTTATTG 58.627 38.462 0.00 0.00 33.69 1.90
83 84 7.014615 GGATGATATTCAACCCAGCTTTATTGT 59.985 37.037 0.00 0.00 33.69 2.71
84 85 7.716799 TGATATTCAACCCAGCTTTATTGTT 57.283 32.000 0.00 0.00 0.00 2.83
85 86 8.133024 TGATATTCAACCCAGCTTTATTGTTT 57.867 30.769 0.00 0.00 0.00 2.83
86 87 8.592809 TGATATTCAACCCAGCTTTATTGTTTT 58.407 29.630 0.00 0.00 0.00 2.43
87 88 8.776376 ATATTCAACCCAGCTTTATTGTTTTG 57.224 30.769 0.00 0.00 0.00 2.44
88 89 4.954875 TCAACCCAGCTTTATTGTTTTGG 58.045 39.130 0.00 0.00 0.00 3.28
89 90 4.651503 TCAACCCAGCTTTATTGTTTTGGA 59.348 37.500 0.00 0.00 0.00 3.53
90 91 5.306678 TCAACCCAGCTTTATTGTTTTGGAT 59.693 36.000 0.00 0.00 0.00 3.41
91 92 6.495181 TCAACCCAGCTTTATTGTTTTGGATA 59.505 34.615 0.00 0.00 0.00 2.59
92 93 7.180051 TCAACCCAGCTTTATTGTTTTGGATAT 59.820 33.333 0.00 0.00 0.00 1.63
93 94 8.474025 CAACCCAGCTTTATTGTTTTGGATATA 58.526 33.333 0.00 0.00 0.00 0.86
94 95 8.602472 ACCCAGCTTTATTGTTTTGGATATAA 57.398 30.769 0.00 0.00 0.00 0.98
95 96 9.212593 ACCCAGCTTTATTGTTTTGGATATAAT 57.787 29.630 0.00 0.00 0.00 1.28
108 109 9.309796 GTTTTGGATATAATAAACGATGTACGC 57.690 33.333 0.00 0.00 46.94 4.42
109 110 8.821147 TTTGGATATAATAAACGATGTACGCT 57.179 30.769 0.00 0.00 46.94 5.07
110 111 8.821147 TTGGATATAATAAACGATGTACGCTT 57.179 30.769 0.00 0.00 46.94 4.68
111 112 8.234887 TGGATATAATAAACGATGTACGCTTG 57.765 34.615 0.00 0.00 46.94 4.01
112 113 7.868922 TGGATATAATAAACGATGTACGCTTGT 59.131 33.333 0.00 0.00 46.94 3.16
113 114 8.706035 GGATATAATAAACGATGTACGCTTGTT 58.294 33.333 0.00 0.00 46.94 2.83
114 115 9.723299 GATATAATAAACGATGTACGCTTGTTC 57.277 33.333 0.00 0.00 46.94 3.18
115 116 2.848562 AAACGATGTACGCTTGTTCG 57.151 45.000 0.00 0.00 46.94 3.95
116 117 2.054687 AACGATGTACGCTTGTTCGA 57.945 45.000 0.00 0.00 46.94 3.71
117 118 1.614385 ACGATGTACGCTTGTTCGAG 58.386 50.000 0.00 0.00 46.94 4.04
118 119 1.068748 ACGATGTACGCTTGTTCGAGT 60.069 47.619 0.00 0.00 46.94 4.18
119 120 1.983605 CGATGTACGCTTGTTCGAGTT 59.016 47.619 0.00 0.00 34.51 3.01
120 121 2.222289 CGATGTACGCTTGTTCGAGTTG 60.222 50.000 0.00 0.00 34.51 3.16
121 122 2.212869 TGTACGCTTGTTCGAGTTGT 57.787 45.000 0.00 0.00 0.00 3.32
122 123 2.542597 TGTACGCTTGTTCGAGTTGTT 58.457 42.857 0.00 0.00 0.00 2.83
123 124 2.283086 TGTACGCTTGTTCGAGTTGTTG 59.717 45.455 0.00 0.00 0.00 3.33
124 125 1.647346 ACGCTTGTTCGAGTTGTTGA 58.353 45.000 0.00 0.00 0.00 3.18
125 126 2.004017 ACGCTTGTTCGAGTTGTTGAA 58.996 42.857 0.00 0.00 0.00 2.69
126 127 2.417239 ACGCTTGTTCGAGTTGTTGAAA 59.583 40.909 0.00 0.00 0.00 2.69
127 128 3.064820 ACGCTTGTTCGAGTTGTTGAAAT 59.935 39.130 0.00 0.00 0.00 2.17
128 129 4.271533 ACGCTTGTTCGAGTTGTTGAAATA 59.728 37.500 0.00 0.00 0.00 1.40
129 130 5.201910 CGCTTGTTCGAGTTGTTGAAATAA 58.798 37.500 0.00 0.00 0.00 1.40
130 131 5.851177 CGCTTGTTCGAGTTGTTGAAATAAT 59.149 36.000 0.00 0.00 0.00 1.28
131 132 7.012943 CGCTTGTTCGAGTTGTTGAAATAATA 58.987 34.615 0.00 0.00 0.00 0.98
132 133 7.532546 CGCTTGTTCGAGTTGTTGAAATAATAA 59.467 33.333 0.00 0.00 0.00 1.40
133 134 9.176181 GCTTGTTCGAGTTGTTGAAATAATAAA 57.824 29.630 0.00 0.00 0.00 1.40
135 136 8.722342 TGTTCGAGTTGTTGAAATAATAAAGC 57.278 30.769 0.00 0.00 0.00 3.51
136 137 7.532546 TGTTCGAGTTGTTGAAATAATAAAGCG 59.467 33.333 0.00 0.00 0.00 4.68
137 138 6.019152 TCGAGTTGTTGAAATAATAAAGCGC 58.981 36.000 0.00 0.00 0.00 5.92
138 139 5.053932 CGAGTTGTTGAAATAATAAAGCGCG 60.054 40.000 0.00 0.00 0.00 6.86
139 140 4.557301 AGTTGTTGAAATAATAAAGCGCGC 59.443 37.500 26.66 26.66 0.00 6.86
140 141 3.430931 TGTTGAAATAATAAAGCGCGCC 58.569 40.909 30.33 10.31 0.00 6.53
141 142 2.376915 TGAAATAATAAAGCGCGCCG 57.623 45.000 30.33 0.00 0.00 6.46
142 143 1.666700 TGAAATAATAAAGCGCGCCGT 59.333 42.857 30.33 18.94 0.00 5.68
143 144 2.034076 GAAATAATAAAGCGCGCCGTG 58.966 47.619 30.33 0.00 0.00 4.94
144 145 1.292061 AATAATAAAGCGCGCCGTGA 58.708 45.000 30.33 10.14 0.00 4.35
145 146 1.292061 ATAATAAAGCGCGCCGTGAA 58.708 45.000 30.33 10.00 0.00 3.18
146 147 0.648441 TAATAAAGCGCGCCGTGAAG 59.352 50.000 30.33 0.00 0.00 3.02
147 148 1.977594 AATAAAGCGCGCCGTGAAGG 61.978 55.000 30.33 0.00 44.97 3.46
157 158 3.657956 CCGTGAAGGCTTTGCAAAA 57.342 47.368 13.84 0.00 0.00 2.44
158 159 1.933247 CCGTGAAGGCTTTGCAAAAA 58.067 45.000 13.84 0.00 0.00 1.94
159 160 1.860326 CCGTGAAGGCTTTGCAAAAAG 59.140 47.619 13.84 3.35 0.00 2.27
160 161 2.481104 CCGTGAAGGCTTTGCAAAAAGA 60.481 45.455 13.84 0.00 31.58 2.52
161 162 3.186119 CGTGAAGGCTTTGCAAAAAGAA 58.814 40.909 13.84 0.00 31.58 2.52
162 163 3.616379 CGTGAAGGCTTTGCAAAAAGAAA 59.384 39.130 13.84 0.00 31.58 2.52
163 164 4.092675 CGTGAAGGCTTTGCAAAAAGAAAA 59.907 37.500 13.84 0.00 31.58 2.29
164 165 5.390356 CGTGAAGGCTTTGCAAAAAGAAAAA 60.390 36.000 13.84 0.00 31.58 1.94
165 166 6.023435 GTGAAGGCTTTGCAAAAAGAAAAAG 58.977 36.000 13.84 0.00 33.67 2.27
166 167 5.123661 TGAAGGCTTTGCAAAAAGAAAAAGG 59.876 36.000 13.84 0.00 31.67 3.11
167 168 3.947196 AGGCTTTGCAAAAAGAAAAAGGG 59.053 39.130 13.84 0.00 31.67 3.95
168 169 3.066621 GGCTTTGCAAAAAGAAAAAGGGG 59.933 43.478 13.84 0.00 31.67 4.79
169 170 3.944650 GCTTTGCAAAAAGAAAAAGGGGA 59.055 39.130 13.84 0.00 31.67 4.81
170 171 4.397730 GCTTTGCAAAAAGAAAAAGGGGAA 59.602 37.500 13.84 0.00 31.67 3.97
171 172 5.105957 GCTTTGCAAAAAGAAAAAGGGGAAA 60.106 36.000 13.84 0.00 31.67 3.13
172 173 6.571344 GCTTTGCAAAAAGAAAAAGGGGAAAA 60.571 34.615 13.84 0.00 31.67 2.29
173 174 6.901081 TTGCAAAAAGAAAAAGGGGAAAAA 57.099 29.167 0.00 0.00 0.00 1.94
174 175 6.507958 TGCAAAAAGAAAAAGGGGAAAAAG 57.492 33.333 0.00 0.00 0.00 2.27
175 176 5.105957 TGCAAAAAGAAAAAGGGGAAAAAGC 60.106 36.000 0.00 0.00 0.00 3.51
304 314 0.903454 ACCCCACGTCTCCGATTTCT 60.903 55.000 0.00 0.00 37.88 2.52
328 338 1.663074 GAGGAGATCATGCCGTCGC 60.663 63.158 0.00 0.00 0.00 5.19
357 369 8.877864 ATGGACTTCAATAAATACTCCAACAA 57.122 30.769 0.00 0.00 30.28 2.83
418 789 3.254657 CAGTGCCGAGTTCCCAAAAATTA 59.745 43.478 0.00 0.00 0.00 1.40
455 829 1.738030 GCCGAGTACCAAACGCACTAT 60.738 52.381 0.00 0.00 0.00 2.12
456 830 2.480073 GCCGAGTACCAAACGCACTATA 60.480 50.000 0.00 0.00 0.00 1.31
457 831 3.369385 CCGAGTACCAAACGCACTATAG 58.631 50.000 0.00 0.00 0.00 1.31
458 832 3.065786 CCGAGTACCAAACGCACTATAGA 59.934 47.826 6.78 0.00 0.00 1.98
579 955 9.745880 AGTGATTATTGCTCATCATCAATTTTC 57.254 29.630 0.00 0.00 34.95 2.29
679 1056 4.632538 TCGCACTGAGATTCGAGAATTA 57.367 40.909 0.00 0.00 0.00 1.40
752 1137 3.121030 CGCTCAAGAACTGCGGGG 61.121 66.667 0.00 0.00 45.07 5.73
753 1138 2.347490 GCTCAAGAACTGCGGGGA 59.653 61.111 0.00 0.00 0.00 4.81
754 1139 1.743252 GCTCAAGAACTGCGGGGAG 60.743 63.158 0.00 0.00 0.00 4.30
839 1227 2.094700 CGATCTTCTTCTTCCACGACCA 60.095 50.000 0.00 0.00 0.00 4.02
897 1294 2.416747 CGATCTCACAACCAGCAGAAA 58.583 47.619 0.00 0.00 0.00 2.52
902 1299 5.426689 TCTCACAACCAGCAGAAAGATAT 57.573 39.130 0.00 0.00 0.00 1.63
903 1300 5.809001 TCTCACAACCAGCAGAAAGATATT 58.191 37.500 0.00 0.00 0.00 1.28
1055 1457 2.828520 TGCTCTTCTTCTTCCTCGTGAT 59.171 45.455 0.00 0.00 0.00 3.06
1116 1518 1.066358 CCTACCCGTCTTCCTTTCCAC 60.066 57.143 0.00 0.00 0.00 4.02
1323 1757 1.202582 CCGTGAGTTCTCGTCCTGAAT 59.797 52.381 3.37 0.00 0.00 2.57
1339 1773 5.237344 GTCCTGAATATTCTTGATCCGTTGG 59.763 44.000 16.24 4.03 0.00 3.77
1340 1774 5.104527 TCCTGAATATTCTTGATCCGTTGGT 60.105 40.000 16.24 0.00 0.00 3.67
1344 1778 1.974265 TTCTTGATCCGTTGGTTGCA 58.026 45.000 0.00 0.00 0.00 4.08
1345 1779 1.974265 TCTTGATCCGTTGGTTGCAA 58.026 45.000 0.00 0.00 0.00 4.08
1364 1798 3.064271 GCAATCCGCATTCGTAGGTAAAA 59.936 43.478 0.00 0.00 41.79 1.52
1375 1809 8.181573 GCATTCGTAGGTAAAATTCAATTCTGA 58.818 33.333 0.00 0.00 0.00 3.27
1378 1812 9.443323 TTCGTAGGTAAAATTCAATTCTGATGA 57.557 29.630 0.00 0.00 0.00 2.92
1391 1826 3.266510 TCTGATGAATTCCGGTTCCTG 57.733 47.619 0.00 0.00 0.00 3.86
1558 1993 4.444081 ACCTCCTACTCCCGCGCT 62.444 66.667 5.56 0.00 0.00 5.92
1622 2057 1.530856 CGCCGCGTAATTCTTTTTCC 58.469 50.000 4.92 0.00 0.00 3.13
1643 2078 2.202756 GATCACCTCGCCACCGTC 60.203 66.667 0.00 0.00 35.54 4.79
1650 2085 2.282958 TCGCCACCGTCTCCTCTT 60.283 61.111 0.00 0.00 35.54 2.85
1692 2129 1.834263 GCTCTCCTGACCATAACCAGT 59.166 52.381 0.00 0.00 0.00 4.00
1915 2352 4.570663 GGGAGGATCGACGGCGTG 62.571 72.222 21.19 10.44 38.98 5.34
2025 2462 2.100916 ACGTCACTGAAACAGCAGTACT 59.899 45.455 0.00 0.00 46.80 2.73
2027 2464 3.717707 GTCACTGAAACAGCAGTACTCA 58.282 45.455 0.00 0.00 46.80 3.41
2033 2470 5.237344 ACTGAAACAGCAGTACTCATTTGTC 59.763 40.000 0.00 0.00 46.67 3.18
2034 2471 5.122519 TGAAACAGCAGTACTCATTTGTCA 58.877 37.500 0.00 0.00 0.00 3.58
2036 2473 3.059884 ACAGCAGTACTCATTTGTCACG 58.940 45.455 0.00 0.00 0.00 4.35
2037 2474 3.243737 ACAGCAGTACTCATTTGTCACGA 60.244 43.478 0.00 0.00 0.00 4.35
2038 2475 3.740832 CAGCAGTACTCATTTGTCACGAA 59.259 43.478 0.00 0.00 0.00 3.85
2039 2476 4.211164 CAGCAGTACTCATTTGTCACGAAA 59.789 41.667 0.00 0.00 0.00 3.46
2041 2478 4.610680 GCAGTACTCATTTGTCACGAAACC 60.611 45.833 0.00 0.00 0.00 3.27
2042 2479 4.750098 CAGTACTCATTTGTCACGAAACCT 59.250 41.667 0.00 0.00 0.00 3.50
2043 2480 5.236478 CAGTACTCATTTGTCACGAAACCTT 59.764 40.000 0.00 0.00 0.00 3.50
2054 2512 5.765677 TGTCACGAAACCTTAATTTCCATCA 59.234 36.000 0.00 0.00 35.52 3.07
2069 2527 4.764679 TCCATCACAAAATGAAGAACCG 57.235 40.909 0.00 0.00 41.93 4.44
2071 2529 3.057315 CCATCACAAAATGAAGAACCGCT 60.057 43.478 0.00 0.00 41.93 5.52
2072 2530 4.549458 CATCACAAAATGAAGAACCGCTT 58.451 39.130 0.00 0.00 41.93 4.68
2073 2531 3.963665 TCACAAAATGAAGAACCGCTTG 58.036 40.909 0.00 0.00 36.83 4.01
2075 2533 3.730715 CACAAAATGAAGAACCGCTTGAC 59.269 43.478 0.00 0.00 36.83 3.18
2076 2534 3.243401 ACAAAATGAAGAACCGCTTGACC 60.243 43.478 0.00 0.00 36.83 4.02
2080 2560 0.955919 GAAGAACCGCTTGACCCCTG 60.956 60.000 0.00 0.00 36.83 4.45
2082 2562 1.201429 AGAACCGCTTGACCCCTGAT 61.201 55.000 0.00 0.00 0.00 2.90
2088 2568 2.618709 CCGCTTGACCCCTGATTAATTC 59.381 50.000 0.00 0.00 0.00 2.17
2185 2665 0.181114 AGCAGCACTGGTCACTGAAA 59.819 50.000 0.00 0.00 36.44 2.69
2190 2670 2.684881 AGCACTGGTCACTGAAACTTTG 59.315 45.455 0.00 0.00 0.00 2.77
2217 2697 7.217200 ACTGAAATATTATTCTGCTTCCGCTA 58.783 34.615 0.00 0.00 36.97 4.26
2243 2723 7.819415 ACGATGAAATGATCTGAAGAACTTGTA 59.181 33.333 0.00 0.00 0.00 2.41
2244 2724 8.824781 CGATGAAATGATCTGAAGAACTTGTAT 58.175 33.333 0.00 0.00 0.00 2.29
2314 2794 8.813643 ACGTGTAAGCATAGTTAATCTAATCC 57.186 34.615 0.00 0.00 31.94 3.01
2365 2853 3.181510 GGTGTTAAGCTAAGATTGCACGG 60.182 47.826 0.00 0.00 0.00 4.94
2386 2874 1.728426 GACTGTTCGTCCGTCCGTG 60.728 63.158 0.00 0.00 36.62 4.94
2387 2875 2.121564 GACTGTTCGTCCGTCCGTGA 62.122 60.000 0.00 0.00 36.62 4.35
2388 2876 1.211969 CTGTTCGTCCGTCCGTGAT 59.788 57.895 0.00 0.00 0.00 3.06
2389 2877 0.797249 CTGTTCGTCCGTCCGTGATC 60.797 60.000 0.00 0.00 0.00 2.92
2390 2878 1.515736 GTTCGTCCGTCCGTGATCC 60.516 63.158 0.00 0.00 0.00 3.36
2391 2879 3.042842 TTCGTCCGTCCGTGATCCG 62.043 63.158 0.00 0.00 0.00 4.18
2392 2880 3.807538 CGTCCGTCCGTGATCCGT 61.808 66.667 0.00 0.00 33.66 4.69
2393 2881 2.101770 GTCCGTCCGTGATCCGTC 59.898 66.667 0.00 0.00 33.66 4.79
2394 2882 3.136123 TCCGTCCGTGATCCGTCC 61.136 66.667 0.00 0.00 33.66 4.79
2398 2886 3.136123 TCCGTGATCCGTCCGTCC 61.136 66.667 0.00 0.00 33.66 4.79
2503 2991 1.318576 CCACCAACCTCAACCTCAAC 58.681 55.000 0.00 0.00 0.00 3.18
2536 3024 1.520494 AGAAGTGCAGCAGTGACATG 58.480 50.000 2.64 0.00 0.00 3.21
2729 3217 1.374252 GGCGTCATCTCCAACGTGT 60.374 57.895 0.00 0.00 40.87 4.49
2791 3279 1.134560 CTCTACTACAACCAGTCGGGC 59.865 57.143 0.00 0.00 42.05 6.13
3353 3849 4.882842 TTGTTAGGCGGATATCATGCTA 57.117 40.909 16.01 6.67 0.00 3.49
3354 3850 4.456280 TGTTAGGCGGATATCATGCTAG 57.544 45.455 16.01 0.00 0.00 3.42
3427 3923 1.003116 GCCTACTGCGAGATTGCATTG 60.003 52.381 0.00 0.00 45.26 2.82
3503 4020 3.246619 GCTGCGAGCTAGTACCATATTC 58.753 50.000 0.00 0.00 38.45 1.75
3515 4032 7.691050 GCTAGTACCATATTCGTTGTGAAAAAC 59.309 37.037 0.00 0.00 40.71 2.43
3523 4040 2.041244 CGTTGTGAAAAACGCTTAGGC 58.959 47.619 0.00 0.00 45.47 3.93
3524 4041 2.286772 CGTTGTGAAAAACGCTTAGGCT 60.287 45.455 0.00 0.00 45.47 4.58
3525 4042 3.702330 GTTGTGAAAAACGCTTAGGCTT 58.298 40.909 0.00 0.00 36.09 4.35
3526 4043 4.109766 GTTGTGAAAAACGCTTAGGCTTT 58.890 39.130 0.00 0.00 36.09 3.51
3527 4044 3.701241 TGTGAAAAACGCTTAGGCTTTG 58.299 40.909 0.00 0.00 36.09 2.77
3528 4045 3.129638 TGTGAAAAACGCTTAGGCTTTGT 59.870 39.130 0.00 0.00 36.09 2.83
3529 4046 4.109766 GTGAAAAACGCTTAGGCTTTGTT 58.890 39.130 0.00 0.00 31.15 2.83
3530 4047 4.206404 GTGAAAAACGCTTAGGCTTTGTTC 59.794 41.667 10.89 10.89 41.45 3.18
3531 4048 2.681152 AAACGCTTAGGCTTTGTTCG 57.319 45.000 0.00 0.00 36.09 3.95
3532 4049 1.873698 AACGCTTAGGCTTTGTTCGA 58.126 45.000 0.00 0.00 36.09 3.71
3533 4050 2.094762 ACGCTTAGGCTTTGTTCGAT 57.905 45.000 0.00 0.00 36.09 3.59
3534 4051 2.423577 ACGCTTAGGCTTTGTTCGATT 58.576 42.857 0.00 0.00 36.09 3.34
3535 4052 3.592059 ACGCTTAGGCTTTGTTCGATTA 58.408 40.909 0.00 0.00 36.09 1.75
3536 4053 3.370061 ACGCTTAGGCTTTGTTCGATTAC 59.630 43.478 0.00 0.00 36.09 1.89
3537 4054 3.369756 CGCTTAGGCTTTGTTCGATTACA 59.630 43.478 0.00 0.00 36.09 2.41
3538 4055 4.648970 GCTTAGGCTTTGTTCGATTACAC 58.351 43.478 0.00 0.00 35.22 2.90
3539 4056 4.436986 GCTTAGGCTTTGTTCGATTACACC 60.437 45.833 0.00 0.00 35.22 4.16
3540 4057 3.418684 AGGCTTTGTTCGATTACACCT 57.581 42.857 0.00 0.00 0.00 4.00
3541 4058 3.335579 AGGCTTTGTTCGATTACACCTC 58.664 45.455 0.00 0.00 0.00 3.85
3542 4059 2.418976 GGCTTTGTTCGATTACACCTCC 59.581 50.000 0.00 0.00 0.00 4.30
3543 4060 3.335579 GCTTTGTTCGATTACACCTCCT 58.664 45.455 0.00 0.00 0.00 3.69
3544 4061 3.371285 GCTTTGTTCGATTACACCTCCTC 59.629 47.826 0.00 0.00 0.00 3.71
3545 4062 4.566004 CTTTGTTCGATTACACCTCCTCA 58.434 43.478 0.00 0.00 0.00 3.86
3546 4063 3.587797 TGTTCGATTACACCTCCTCAC 57.412 47.619 0.00 0.00 0.00 3.51
3547 4064 2.894765 TGTTCGATTACACCTCCTCACA 59.105 45.455 0.00 0.00 0.00 3.58
3548 4065 3.056821 TGTTCGATTACACCTCCTCACAG 60.057 47.826 0.00 0.00 0.00 3.66
3549 4066 2.100197 TCGATTACACCTCCTCACAGG 58.900 52.381 0.00 0.00 39.80 4.00
3550 4067 1.137086 CGATTACACCTCCTCACAGGG 59.863 57.143 0.00 0.00 37.96 4.45
3551 4068 1.486726 GATTACACCTCCTCACAGGGG 59.513 57.143 0.00 0.00 43.56 4.79
3557 4074 1.918253 CTCCTCACAGGGGGATTGG 59.082 63.158 0.00 0.00 35.59 3.16
3558 4075 1.619363 TCCTCACAGGGGGATTGGG 60.619 63.158 0.00 0.00 35.59 4.12
3559 4076 2.693871 CCTCACAGGGGGATTGGGG 61.694 68.421 0.00 0.00 0.00 4.96
3560 4077 1.930656 CTCACAGGGGGATTGGGGT 60.931 63.158 0.00 0.00 0.00 4.95
3561 4078 2.215451 CTCACAGGGGGATTGGGGTG 62.215 65.000 0.00 0.00 0.00 4.61
3562 4079 2.946650 ACAGGGGGATTGGGGTGG 60.947 66.667 0.00 0.00 0.00 4.61
3563 4080 2.616893 CAGGGGGATTGGGGTGGA 60.617 66.667 0.00 0.00 0.00 4.02
3564 4081 2.014550 CAGGGGGATTGGGGTGGAT 61.015 63.158 0.00 0.00 0.00 3.41
3565 4082 1.230956 AGGGGGATTGGGGTGGATT 60.231 57.895 0.00 0.00 0.00 3.01
3566 4083 1.075301 GGGGGATTGGGGTGGATTG 60.075 63.158 0.00 0.00 0.00 2.67
3567 4084 1.075301 GGGGATTGGGGTGGATTGG 60.075 63.158 0.00 0.00 0.00 3.16
3568 4085 1.589399 GGGGATTGGGGTGGATTGGA 61.589 60.000 0.00 0.00 0.00 3.53
3569 4086 0.106015 GGGATTGGGGTGGATTGGAG 60.106 60.000 0.00 0.00 0.00 3.86
3570 4087 0.106015 GGATTGGGGTGGATTGGAGG 60.106 60.000 0.00 0.00 0.00 4.30
3571 4088 0.926293 GATTGGGGTGGATTGGAGGA 59.074 55.000 0.00 0.00 0.00 3.71
3572 4089 0.929244 ATTGGGGTGGATTGGAGGAG 59.071 55.000 0.00 0.00 0.00 3.69
3573 4090 1.214305 TTGGGGTGGATTGGAGGAGG 61.214 60.000 0.00 0.00 0.00 4.30
3574 4091 1.619669 GGGGTGGATTGGAGGAGGT 60.620 63.158 0.00 0.00 0.00 3.85
3575 4092 1.214992 GGGGTGGATTGGAGGAGGTT 61.215 60.000 0.00 0.00 0.00 3.50
3576 4093 0.704664 GGGTGGATTGGAGGAGGTTT 59.295 55.000 0.00 0.00 0.00 3.27
3577 4094 1.077169 GGGTGGATTGGAGGAGGTTTT 59.923 52.381 0.00 0.00 0.00 2.43
3578 4095 2.171003 GGTGGATTGGAGGAGGTTTTG 58.829 52.381 0.00 0.00 0.00 2.44
3579 4096 2.225017 GGTGGATTGGAGGAGGTTTTGA 60.225 50.000 0.00 0.00 0.00 2.69
3580 4097 2.820197 GTGGATTGGAGGAGGTTTTGAC 59.180 50.000 0.00 0.00 0.00 3.18
3581 4098 2.716424 TGGATTGGAGGAGGTTTTGACT 59.284 45.455 0.00 0.00 0.00 3.41
3582 4099 3.140144 TGGATTGGAGGAGGTTTTGACTT 59.860 43.478 0.00 0.00 0.00 3.01
3583 4100 3.759086 GGATTGGAGGAGGTTTTGACTTC 59.241 47.826 0.00 0.00 0.00 3.01
3584 4101 4.507512 GGATTGGAGGAGGTTTTGACTTCT 60.508 45.833 0.00 0.00 0.00 2.85
3585 4102 5.280521 GGATTGGAGGAGGTTTTGACTTCTA 60.281 44.000 0.00 0.00 0.00 2.10
3586 4103 4.891992 TGGAGGAGGTTTTGACTTCTAG 57.108 45.455 0.00 0.00 0.00 2.43
3587 4104 4.489737 TGGAGGAGGTTTTGACTTCTAGA 58.510 43.478 0.00 0.00 0.00 2.43
3588 4105 4.528596 TGGAGGAGGTTTTGACTTCTAGAG 59.471 45.833 0.00 0.00 0.00 2.43
3589 4106 4.081365 GGAGGAGGTTTTGACTTCTAGAGG 60.081 50.000 0.00 0.00 0.00 3.69
3590 4107 4.753186 AGGAGGTTTTGACTTCTAGAGGA 58.247 43.478 9.14 0.00 0.00 3.71
3591 4108 5.346270 AGGAGGTTTTGACTTCTAGAGGAT 58.654 41.667 9.14 0.00 0.00 3.24
3592 4109 5.188751 AGGAGGTTTTGACTTCTAGAGGATG 59.811 44.000 9.14 0.00 0.00 3.51
3593 4110 5.046231 GGAGGTTTTGACTTCTAGAGGATGT 60.046 44.000 9.14 0.00 35.43 3.06
3594 4111 6.154706 GGAGGTTTTGACTTCTAGAGGATGTA 59.845 42.308 9.14 0.00 33.32 2.29
3595 4112 7.310485 GGAGGTTTTGACTTCTAGAGGATGTAA 60.310 40.741 9.14 0.00 33.32 2.41
3596 4113 8.152023 AGGTTTTGACTTCTAGAGGATGTAAT 57.848 34.615 9.14 0.00 33.32 1.89
3597 4114 8.261522 AGGTTTTGACTTCTAGAGGATGTAATC 58.738 37.037 9.14 0.00 44.55 1.75
3609 4126 2.519013 GATGTAATCCCTGCCAATCCC 58.481 52.381 0.00 0.00 37.38 3.85
3610 4127 1.607225 TGTAATCCCTGCCAATCCCT 58.393 50.000 0.00 0.00 0.00 4.20
3611 4128 1.215173 TGTAATCCCTGCCAATCCCTG 59.785 52.381 0.00 0.00 0.00 4.45
3612 4129 1.215423 GTAATCCCTGCCAATCCCTGT 59.785 52.381 0.00 0.00 0.00 4.00
3613 4130 0.259938 AATCCCTGCCAATCCCTGTC 59.740 55.000 0.00 0.00 0.00 3.51
3614 4131 0.920763 ATCCCTGCCAATCCCTGTCA 60.921 55.000 0.00 0.00 0.00 3.58
3615 4132 1.139498 TCCCTGCCAATCCCTGTCAA 61.139 55.000 0.00 0.00 0.00 3.18
3616 4133 0.251742 CCCTGCCAATCCCTGTCAAA 60.252 55.000 0.00 0.00 0.00 2.69
3617 4134 0.890683 CCTGCCAATCCCTGTCAAAC 59.109 55.000 0.00 0.00 0.00 2.93
3618 4135 0.890683 CTGCCAATCCCTGTCAAACC 59.109 55.000 0.00 0.00 0.00 3.27
3619 4136 0.541764 TGCCAATCCCTGTCAAACCC 60.542 55.000 0.00 0.00 0.00 4.11
3620 4137 0.251787 GCCAATCCCTGTCAAACCCT 60.252 55.000 0.00 0.00 0.00 4.34
3621 4138 1.827245 GCCAATCCCTGTCAAACCCTT 60.827 52.381 0.00 0.00 0.00 3.95
3622 4139 2.608623 CCAATCCCTGTCAAACCCTTT 58.391 47.619 0.00 0.00 0.00 3.11
3623 4140 2.562738 CCAATCCCTGTCAAACCCTTTC 59.437 50.000 0.00 0.00 0.00 2.62
3624 4141 3.230134 CAATCCCTGTCAAACCCTTTCA 58.770 45.455 0.00 0.00 0.00 2.69
3625 4142 3.833559 ATCCCTGTCAAACCCTTTCAT 57.166 42.857 0.00 0.00 0.00 2.57
3626 4143 3.611025 TCCCTGTCAAACCCTTTCATT 57.389 42.857 0.00 0.00 0.00 2.57
3627 4144 3.922375 TCCCTGTCAAACCCTTTCATTT 58.078 40.909 0.00 0.00 0.00 2.32
3628 4145 4.294347 TCCCTGTCAAACCCTTTCATTTT 58.706 39.130 0.00 0.00 0.00 1.82
3629 4146 4.719273 TCCCTGTCAAACCCTTTCATTTTT 59.281 37.500 0.00 0.00 0.00 1.94
3630 4147 5.056480 CCCTGTCAAACCCTTTCATTTTTC 58.944 41.667 0.00 0.00 0.00 2.29
3631 4148 5.056480 CCTGTCAAACCCTTTCATTTTTCC 58.944 41.667 0.00 0.00 0.00 3.13
3632 4149 5.163311 CCTGTCAAACCCTTTCATTTTTCCT 60.163 40.000 0.00 0.00 0.00 3.36
3633 4150 5.669477 TGTCAAACCCTTTCATTTTTCCTG 58.331 37.500 0.00 0.00 0.00 3.86
3634 4151 5.188751 TGTCAAACCCTTTCATTTTTCCTGT 59.811 36.000 0.00 0.00 0.00 4.00
3635 4152 5.753438 GTCAAACCCTTTCATTTTTCCTGTC 59.247 40.000 0.00 0.00 0.00 3.51
3636 4153 5.423610 TCAAACCCTTTCATTTTTCCTGTCA 59.576 36.000 0.00 0.00 0.00 3.58
3637 4154 5.948742 AACCCTTTCATTTTTCCTGTCAA 57.051 34.783 0.00 0.00 0.00 3.18
3638 4155 5.276461 ACCCTTTCATTTTTCCTGTCAAC 57.724 39.130 0.00 0.00 0.00 3.18
3639 4156 4.100963 ACCCTTTCATTTTTCCTGTCAACC 59.899 41.667 0.00 0.00 0.00 3.77
3640 4157 4.298332 CCTTTCATTTTTCCTGTCAACCG 58.702 43.478 0.00 0.00 0.00 4.44
3641 4158 4.037446 CCTTTCATTTTTCCTGTCAACCGA 59.963 41.667 0.00 0.00 0.00 4.69
3642 4159 5.451242 CCTTTCATTTTTCCTGTCAACCGAA 60.451 40.000 0.00 0.00 0.00 4.30
3643 4160 4.561735 TCATTTTTCCTGTCAACCGAAC 57.438 40.909 0.00 0.00 0.00 3.95
3644 4161 3.948473 TCATTTTTCCTGTCAACCGAACA 59.052 39.130 0.00 0.00 0.00 3.18
3645 4162 4.036262 TCATTTTTCCTGTCAACCGAACAG 59.964 41.667 0.00 0.00 43.04 3.16
3648 4165 3.655481 CTGTCAACCGAACAGGCC 58.345 61.111 0.00 0.00 46.52 5.19
3671 4188 6.071051 GCCCTTATGAGTAATCCAACCAAAAA 60.071 38.462 0.00 0.00 0.00 1.94
3703 4223 1.539827 CAAAGCAAACCGGAACCTAGG 59.460 52.381 9.46 7.41 0.00 3.02
3728 4248 4.235406 CTGTCCGACAGCAAGAGGAACT 62.235 54.545 15.49 0.00 40.15 3.01
3742 4262 2.787994 AGGAACTCCTGCAGATTTGTG 58.212 47.619 17.39 1.55 46.55 3.33
3743 4263 2.107204 AGGAACTCCTGCAGATTTGTGT 59.893 45.455 17.39 2.24 46.55 3.72
3744 4264 3.327757 AGGAACTCCTGCAGATTTGTGTA 59.672 43.478 17.39 0.00 46.55 2.90
3745 4265 4.072131 GGAACTCCTGCAGATTTGTGTAA 58.928 43.478 17.39 0.00 0.00 2.41
3746 4266 4.518970 GGAACTCCTGCAGATTTGTGTAAA 59.481 41.667 17.39 0.00 0.00 2.01
3747 4267 5.009610 GGAACTCCTGCAGATTTGTGTAAAA 59.990 40.000 17.39 0.00 0.00 1.52
3760 4280 4.699925 TGTGTAAAAAGCACTACTCCCT 57.300 40.909 0.00 0.00 37.70 4.20
3761 4281 5.043737 TGTGTAAAAAGCACTACTCCCTT 57.956 39.130 0.00 0.00 37.70 3.95
3762 4282 5.061179 TGTGTAAAAAGCACTACTCCCTTC 58.939 41.667 0.00 0.00 37.70 3.46
3763 4283 4.151867 GTGTAAAAAGCACTACTCCCTTCG 59.848 45.833 0.00 0.00 34.30 3.79
3764 4284 3.487120 AAAAAGCACTACTCCCTTCGT 57.513 42.857 0.00 0.00 0.00 3.85
3765 4285 2.745515 AAAGCACTACTCCCTTCGTC 57.254 50.000 0.00 0.00 0.00 4.20
3766 4286 1.926108 AAGCACTACTCCCTTCGTCT 58.074 50.000 0.00 0.00 0.00 4.18
3767 4287 1.465794 AGCACTACTCCCTTCGTCTC 58.534 55.000 0.00 0.00 0.00 3.36
3768 4288 1.174783 GCACTACTCCCTTCGTCTCA 58.825 55.000 0.00 0.00 0.00 3.27
3769 4289 1.544691 GCACTACTCCCTTCGTCTCAA 59.455 52.381 0.00 0.00 0.00 3.02
3770 4290 2.029290 GCACTACTCCCTTCGTCTCAAA 60.029 50.000 0.00 0.00 0.00 2.69
3771 4291 3.554337 GCACTACTCCCTTCGTCTCAAAA 60.554 47.826 0.00 0.00 0.00 2.44
3772 4292 4.822026 CACTACTCCCTTCGTCTCAAAAT 58.178 43.478 0.00 0.00 0.00 1.82
3773 4293 5.623824 GCACTACTCCCTTCGTCTCAAAATA 60.624 44.000 0.00 0.00 0.00 1.40
3774 4294 6.395629 CACTACTCCCTTCGTCTCAAAATAA 58.604 40.000 0.00 0.00 0.00 1.40
3777 4297 8.755977 ACTACTCCCTTCGTCTCAAAATAAATA 58.244 33.333 0.00 0.00 0.00 1.40
3784 4304 6.525121 TCGTCTCAAAATAAATATCGCTGG 57.475 37.500 0.00 0.00 0.00 4.85
3803 4323 3.083293 TGGTTTAGTATTTTGGGACGGC 58.917 45.455 0.00 0.00 0.00 5.68
3804 4324 2.096335 GGTTTAGTATTTTGGGACGGCG 59.904 50.000 4.80 4.80 0.00 6.46
3805 4325 2.027003 TTAGTATTTTGGGACGGCGG 57.973 50.000 13.24 0.00 0.00 6.13
3806 4326 0.178533 TAGTATTTTGGGACGGCGGG 59.821 55.000 13.24 0.00 0.00 6.13
3807 4327 1.078285 GTATTTTGGGACGGCGGGA 60.078 57.895 13.24 0.00 0.00 5.14
3808 4328 1.093496 GTATTTTGGGACGGCGGGAG 61.093 60.000 13.24 0.00 0.00 4.30
3809 4329 1.555477 TATTTTGGGACGGCGGGAGT 61.555 55.000 13.24 0.00 0.00 3.85
3811 4331 1.555477 TTTTGGGACGGCGGGAGTAT 61.555 55.000 13.24 0.00 0.00 2.12
3812 4332 0.687098 TTTGGGACGGCGGGAGTATA 60.687 55.000 13.24 0.00 0.00 1.47
3814 4334 0.470456 TGGGACGGCGGGAGTATATT 60.470 55.000 13.24 0.00 0.00 1.28
3830 6169 9.059023 GGGAGTATATTTGGAGGGAGTATATTT 57.941 37.037 0.00 0.00 0.00 1.40
3839 6178 9.793259 TTTGGAGGGAGTATATTTGTGATAATC 57.207 33.333 0.00 0.00 0.00 1.75
3854 6193 9.685276 TTTGTGATAATCTTATCTGGTGAATGT 57.315 29.630 10.43 0.00 40.11 2.71
3855 6194 8.893219 TGTGATAATCTTATCTGGTGAATGTC 57.107 34.615 10.43 0.00 40.11 3.06
3856 6195 7.653311 TGTGATAATCTTATCTGGTGAATGTCG 59.347 37.037 10.43 0.00 40.11 4.35
3857 6196 7.116948 GTGATAATCTTATCTGGTGAATGTCGG 59.883 40.741 10.43 0.00 40.11 4.79
3858 6197 3.179443 TCTTATCTGGTGAATGTCGGC 57.821 47.619 0.00 0.00 0.00 5.54
3859 6198 2.766263 TCTTATCTGGTGAATGTCGGCT 59.234 45.455 0.00 0.00 0.00 5.52
3860 6199 2.602257 TATCTGGTGAATGTCGGCTG 57.398 50.000 0.00 0.00 0.00 4.85
3861 6200 0.904649 ATCTGGTGAATGTCGGCTGA 59.095 50.000 0.00 0.00 0.00 4.26
3862 6201 0.684535 TCTGGTGAATGTCGGCTGAA 59.315 50.000 0.00 0.00 0.00 3.02
3871 6217 0.250234 TGTCGGCTGAAAGAGGGATG 59.750 55.000 0.00 0.00 34.07 3.51
3872 6218 0.250513 GTCGGCTGAAAGAGGGATGT 59.749 55.000 0.00 0.00 34.07 3.06
3876 6222 2.795329 GGCTGAAAGAGGGATGTCAAA 58.205 47.619 0.00 0.00 34.07 2.69
3879 6225 3.664107 CTGAAAGAGGGATGTCAAACGA 58.336 45.455 0.00 0.00 34.07 3.85
3882 6228 2.080286 AGAGGGATGTCAAACGAACG 57.920 50.000 0.00 0.00 0.00 3.95
3886 6232 1.265905 GGGATGTCAAACGAACGCTTT 59.734 47.619 0.00 0.00 0.00 3.51
3890 6236 2.011222 TGTCAAACGAACGCTTTTCCT 58.989 42.857 0.00 0.00 0.00 3.36
3912 6290 7.708998 TCCTGCAGTTTTAGTAAACGAAAAAT 58.291 30.769 13.81 0.13 46.54 1.82
3913 6291 7.646130 TCCTGCAGTTTTAGTAAACGAAAAATG 59.354 33.333 18.29 18.29 46.54 2.32
3921 6299 8.791355 TTTAGTAAACGAAAAATGCCTTCTTC 57.209 30.769 0.00 0.00 0.00 2.87
3923 6301 6.669278 AGTAAACGAAAAATGCCTTCTTCTC 58.331 36.000 0.00 0.00 0.00 2.87
3930 6308 6.142958 CGAAAAATGCCTTCTTCTCAAGAAAC 59.857 38.462 0.61 0.00 46.13 2.78
3935 6313 4.130118 GCCTTCTTCTCAAGAAACTGTCA 58.870 43.478 0.61 0.00 46.13 3.58
3943 6321 8.993121 TCTTCTCAAGAAACTGTCATGTTATTC 58.007 33.333 0.00 0.00 33.83 1.75
3945 6323 8.315391 TCTCAAGAAACTGTCATGTTATTCTG 57.685 34.615 0.00 0.00 0.00 3.02
3946 6324 8.150296 TCTCAAGAAACTGTCATGTTATTCTGA 58.850 33.333 0.00 0.00 0.00 3.27
3947 6325 8.675705 TCAAGAAACTGTCATGTTATTCTGAA 57.324 30.769 0.00 0.00 0.00 3.02
3952 6330 8.682936 AAACTGTCATGTTATTCTGAAGAAGT 57.317 30.769 0.00 0.00 37.48 3.01
3962 6340 3.703001 TCTGAAGAAGTTGTCATCCCC 57.297 47.619 0.00 0.00 0.00 4.81
3963 6341 2.028112 TCTGAAGAAGTTGTCATCCCCG 60.028 50.000 0.00 0.00 0.00 5.73
3973 6351 2.156098 TGTCATCCCCGCAACTAAAAC 58.844 47.619 0.00 0.00 0.00 2.43
3974 6352 1.471287 GTCATCCCCGCAACTAAAACC 59.529 52.381 0.00 0.00 0.00 3.27
3983 6361 0.589223 CAACTAAAACCGCCAGCGAA 59.411 50.000 14.67 0.00 42.83 4.70
3990 6368 1.908066 AACCGCCAGCGAAATCGTTC 61.908 55.000 14.67 0.00 42.83 3.95
4003 6381 2.465860 ATCGTTCGAAATGTCACCCA 57.534 45.000 0.00 0.00 0.00 4.51
4007 6385 2.767505 GTTCGAAATGTCACCCACTCT 58.232 47.619 0.00 0.00 0.00 3.24
4008 6386 2.737252 GTTCGAAATGTCACCCACTCTC 59.263 50.000 0.00 0.00 0.00 3.20
4016 6394 1.734477 CACCCACTCTCAGCGAACG 60.734 63.158 0.00 0.00 0.00 3.95
4034 6412 0.442699 CGTTCGCCAACTAAGAAGGC 59.557 55.000 0.00 0.00 44.89 4.35
4037 6415 1.267121 TCGCCAACTAAGAAGGCTCT 58.733 50.000 0.00 0.00 46.14 4.09
4042 6420 4.454504 CGCCAACTAAGAAGGCTCTTTTTA 59.545 41.667 0.00 0.00 46.14 1.52
4043 6421 5.123979 CGCCAACTAAGAAGGCTCTTTTTAT 59.876 40.000 0.00 0.00 46.14 1.40
4045 6423 7.378966 GCCAACTAAGAAGGCTCTTTTTATTT 58.621 34.615 0.00 0.00 44.92 1.40
4046 6424 7.872993 GCCAACTAAGAAGGCTCTTTTTATTTT 59.127 33.333 0.00 0.00 44.92 1.82
4047 6425 9.764363 CCAACTAAGAAGGCTCTTTTTATTTTT 57.236 29.630 4.87 0.00 42.17 1.94
4073 6451 7.867909 TGGATTTAAGCATGTTCTAGTAGATCG 59.132 37.037 0.00 0.00 0.00 3.69
4095 6473 3.368013 GGCCTAAAACCCAAATTTCCTCG 60.368 47.826 0.00 0.00 0.00 4.63
4098 6476 5.126545 GCCTAAAACCCAAATTTCCTCGTAT 59.873 40.000 0.00 0.00 0.00 3.06
4099 6477 6.319405 GCCTAAAACCCAAATTTCCTCGTATA 59.681 38.462 0.00 0.00 0.00 1.47
4132 6510 6.231211 TCCTAAAACTTTTCTCCACTAGCTG 58.769 40.000 0.00 0.00 0.00 4.24
4157 6535 8.098286 TGAGATATAGTCTAGAGTAGGCACTTC 58.902 40.741 12.72 6.57 37.28 3.01
4159 6537 8.665906 AGATATAGTCTAGAGTAGGCACTTCTT 58.334 37.037 12.72 0.00 33.54 2.52
4160 6538 6.952773 ATAGTCTAGAGTAGGCACTTCTTG 57.047 41.667 12.72 0.00 35.82 3.02
4194 6572 0.599558 TGTTGCATTGCTTCCTGCTC 59.400 50.000 10.49 0.00 43.37 4.26
4232 6610 2.551287 CCCGATCCTAACACAACAACCA 60.551 50.000 0.00 0.00 0.00 3.67
4239 6617 1.674359 AACACAACAACCATCGCTCA 58.326 45.000 0.00 0.00 0.00 4.26
4247 6625 2.046023 CCATCGCTCACCTTGCCA 60.046 61.111 0.00 0.00 0.00 4.92
4272 6650 4.728102 TTCGCGGCACCGACGATT 62.728 61.111 22.38 0.00 43.07 3.34
4300 6678 3.978571 GAAAGCCTCACCCTCGCCC 62.979 68.421 0.00 0.00 0.00 6.13
4316 6694 4.489771 CCATGCCCGGAGACCCAC 62.490 72.222 0.73 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.480610 CGGCCAAGTTATGCGCCAT 61.481 57.895 4.18 0.63 42.33 4.40
1 2 3.130819 CGGCCAAGTTATGCGCCA 61.131 61.111 4.18 0.00 42.33 5.69
2 3 2.822255 TCGGCCAAGTTATGCGCC 60.822 61.111 4.18 0.00 40.18 6.53
3 4 1.714899 ATGTCGGCCAAGTTATGCGC 61.715 55.000 2.24 0.00 0.00 6.09
4 5 0.027979 CATGTCGGCCAAGTTATGCG 59.972 55.000 2.24 0.00 0.00 4.73
5 6 0.248621 GCATGTCGGCCAAGTTATGC 60.249 55.000 2.24 7.60 34.86 3.14
6 7 1.064505 CAGCATGTCGGCCAAGTTATG 59.935 52.381 2.24 0.65 0.00 1.90
7 8 1.382522 CAGCATGTCGGCCAAGTTAT 58.617 50.000 2.24 0.00 0.00 1.89
8 9 2.853159 CAGCATGTCGGCCAAGTTA 58.147 52.632 2.24 0.00 0.00 2.24
9 10 3.672293 CAGCATGTCGGCCAAGTT 58.328 55.556 2.24 0.00 0.00 2.66
20 21 4.634883 AGCAGAATTAGAACTGACAGCATG 59.365 41.667 1.25 0.00 37.04 4.06
21 22 4.841422 AGCAGAATTAGAACTGACAGCAT 58.159 39.130 1.25 0.00 36.38 3.79
22 23 4.277515 AGCAGAATTAGAACTGACAGCA 57.722 40.909 1.25 0.00 36.38 4.41
23 24 4.142730 CCAAGCAGAATTAGAACTGACAGC 60.143 45.833 1.25 0.00 36.38 4.40
24 25 5.240891 TCCAAGCAGAATTAGAACTGACAG 58.759 41.667 0.00 0.00 36.38 3.51
25 26 5.221722 ACTCCAAGCAGAATTAGAACTGACA 60.222 40.000 0.00 0.00 36.38 3.58
26 27 5.241662 ACTCCAAGCAGAATTAGAACTGAC 58.758 41.667 0.00 0.00 36.38 3.51
27 28 5.489792 ACTCCAAGCAGAATTAGAACTGA 57.510 39.130 0.00 0.00 36.38 3.41
28 29 7.856145 AATACTCCAAGCAGAATTAGAACTG 57.144 36.000 0.00 0.00 37.22 3.16
29 30 8.870075 AAAATACTCCAAGCAGAATTAGAACT 57.130 30.769 0.00 0.00 0.00 3.01
30 31 9.346725 CAAAAATACTCCAAGCAGAATTAGAAC 57.653 33.333 0.00 0.00 0.00 3.01
31 32 8.522830 CCAAAAATACTCCAAGCAGAATTAGAA 58.477 33.333 0.00 0.00 0.00 2.10
32 33 7.122650 CCCAAAAATACTCCAAGCAGAATTAGA 59.877 37.037 0.00 0.00 0.00 2.10
33 34 7.122650 TCCCAAAAATACTCCAAGCAGAATTAG 59.877 37.037 0.00 0.00 0.00 1.73
34 35 6.951198 TCCCAAAAATACTCCAAGCAGAATTA 59.049 34.615 0.00 0.00 0.00 1.40
35 36 5.779771 TCCCAAAAATACTCCAAGCAGAATT 59.220 36.000 0.00 0.00 0.00 2.17
36 37 5.332743 TCCCAAAAATACTCCAAGCAGAAT 58.667 37.500 0.00 0.00 0.00 2.40
37 38 4.735369 TCCCAAAAATACTCCAAGCAGAA 58.265 39.130 0.00 0.00 0.00 3.02
38 39 4.380843 TCCCAAAAATACTCCAAGCAGA 57.619 40.909 0.00 0.00 0.00 4.26
39 40 4.706476 TCATCCCAAAAATACTCCAAGCAG 59.294 41.667 0.00 0.00 0.00 4.24
40 41 4.671831 TCATCCCAAAAATACTCCAAGCA 58.328 39.130 0.00 0.00 0.00 3.91
41 42 5.859205 ATCATCCCAAAAATACTCCAAGC 57.141 39.130 0.00 0.00 0.00 4.01
42 43 9.135189 TGAATATCATCCCAAAAATACTCCAAG 57.865 33.333 0.00 0.00 0.00 3.61
43 44 9.486123 TTGAATATCATCCCAAAAATACTCCAA 57.514 29.630 0.00 0.00 0.00 3.53
44 45 8.912988 GTTGAATATCATCCCAAAAATACTCCA 58.087 33.333 0.00 0.00 0.00 3.86
45 46 8.360390 GGTTGAATATCATCCCAAAAATACTCC 58.640 37.037 0.00 0.00 31.60 3.85
57 58 7.014615 ACAATAAAGCTGGGTTGAATATCATCC 59.985 37.037 10.96 0.00 35.90 3.51
58 59 7.945134 ACAATAAAGCTGGGTTGAATATCATC 58.055 34.615 10.96 0.00 0.00 2.92
59 60 7.902920 ACAATAAAGCTGGGTTGAATATCAT 57.097 32.000 10.96 0.00 0.00 2.45
60 61 7.716799 AACAATAAAGCTGGGTTGAATATCA 57.283 32.000 10.96 0.00 0.00 2.15
61 62 8.872845 CAAAACAATAAAGCTGGGTTGAATATC 58.127 33.333 10.96 0.00 0.00 1.63
62 63 7.823799 CCAAAACAATAAAGCTGGGTTGAATAT 59.176 33.333 10.96 0.00 0.00 1.28
63 64 7.015682 TCCAAAACAATAAAGCTGGGTTGAATA 59.984 33.333 10.96 0.00 0.00 1.75
64 65 5.997129 CCAAAACAATAAAGCTGGGTTGAAT 59.003 36.000 10.96 0.00 0.00 2.57
65 66 5.129485 TCCAAAACAATAAAGCTGGGTTGAA 59.871 36.000 10.96 0.00 0.00 2.69
66 67 4.651503 TCCAAAACAATAAAGCTGGGTTGA 59.348 37.500 10.96 0.00 0.00 3.18
67 68 4.954875 TCCAAAACAATAAAGCTGGGTTG 58.045 39.130 0.00 0.00 0.00 3.77
68 69 5.823861 ATCCAAAACAATAAAGCTGGGTT 57.176 34.783 0.00 0.00 0.00 4.11
69 70 8.602472 TTATATCCAAAACAATAAAGCTGGGT 57.398 30.769 0.00 0.00 0.00 4.51
82 83 9.309796 GCGTACATCGTTTATTATATCCAAAAC 57.690 33.333 0.00 0.00 42.13 2.43
83 84 9.263538 AGCGTACATCGTTTATTATATCCAAAA 57.736 29.630 0.00 0.00 42.13 2.44
84 85 8.821147 AGCGTACATCGTTTATTATATCCAAA 57.179 30.769 0.00 0.00 42.13 3.28
85 86 8.705134 CAAGCGTACATCGTTTATTATATCCAA 58.295 33.333 0.00 0.00 40.69 3.53
86 87 7.868922 ACAAGCGTACATCGTTTATTATATCCA 59.131 33.333 0.00 0.00 40.69 3.41
87 88 8.236084 ACAAGCGTACATCGTTTATTATATCC 57.764 34.615 0.00 0.00 40.69 2.59
88 89 9.723299 GAACAAGCGTACATCGTTTATTATATC 57.277 33.333 0.00 0.00 40.69 1.63
89 90 8.422457 CGAACAAGCGTACATCGTTTATTATAT 58.578 33.333 0.00 0.00 40.69 0.86
90 91 7.643371 TCGAACAAGCGTACATCGTTTATTATA 59.357 33.333 0.00 0.00 40.69 0.98
91 92 6.473131 TCGAACAAGCGTACATCGTTTATTAT 59.527 34.615 0.00 0.00 40.69 1.28
92 93 5.799435 TCGAACAAGCGTACATCGTTTATTA 59.201 36.000 0.00 0.00 40.69 0.98
93 94 4.622313 TCGAACAAGCGTACATCGTTTATT 59.378 37.500 0.00 0.00 40.69 1.40
94 95 4.168014 TCGAACAAGCGTACATCGTTTAT 58.832 39.130 0.00 0.00 40.69 1.40
95 96 3.563508 TCGAACAAGCGTACATCGTTTA 58.436 40.909 0.00 0.00 40.69 2.01
96 97 2.396601 TCGAACAAGCGTACATCGTTT 58.603 42.857 0.00 0.00 43.19 3.60
97 98 1.983605 CTCGAACAAGCGTACATCGTT 59.016 47.619 0.00 0.00 42.13 3.85
98 99 1.068748 ACTCGAACAAGCGTACATCGT 60.069 47.619 0.00 0.00 42.13 3.73
99 100 1.614385 ACTCGAACAAGCGTACATCG 58.386 50.000 0.00 0.00 43.12 3.84
100 101 2.729882 ACAACTCGAACAAGCGTACATC 59.270 45.455 0.00 0.00 0.00 3.06
101 102 2.750948 ACAACTCGAACAAGCGTACAT 58.249 42.857 0.00 0.00 0.00 2.29
102 103 2.212869 ACAACTCGAACAAGCGTACA 57.787 45.000 0.00 0.00 0.00 2.90
103 104 2.536803 TCAACAACTCGAACAAGCGTAC 59.463 45.455 0.00 0.00 0.00 3.67
104 105 2.811855 TCAACAACTCGAACAAGCGTA 58.188 42.857 0.00 0.00 0.00 4.42
105 106 1.647346 TCAACAACTCGAACAAGCGT 58.353 45.000 0.00 0.00 0.00 5.07
106 107 2.730183 TTCAACAACTCGAACAAGCG 57.270 45.000 0.00 0.00 0.00 4.68
107 108 8.722342 TTATTATTTCAACAACTCGAACAAGC 57.278 30.769 0.00 0.00 0.00 4.01
109 110 9.176181 GCTTTATTATTTCAACAACTCGAACAA 57.824 29.630 0.00 0.00 0.00 2.83
110 111 7.532546 CGCTTTATTATTTCAACAACTCGAACA 59.467 33.333 0.00 0.00 0.00 3.18
111 112 7.459733 GCGCTTTATTATTTCAACAACTCGAAC 60.460 37.037 0.00 0.00 0.00 3.95
112 113 6.521821 GCGCTTTATTATTTCAACAACTCGAA 59.478 34.615 0.00 0.00 0.00 3.71
113 114 6.019152 GCGCTTTATTATTTCAACAACTCGA 58.981 36.000 0.00 0.00 0.00 4.04
114 115 5.053932 CGCGCTTTATTATTTCAACAACTCG 60.054 40.000 5.56 0.00 0.00 4.18
115 116 5.275280 GCGCGCTTTATTATTTCAACAACTC 60.275 40.000 26.67 0.00 0.00 3.01
116 117 4.557301 GCGCGCTTTATTATTTCAACAACT 59.443 37.500 26.67 0.00 0.00 3.16
117 118 4.259253 GGCGCGCTTTATTATTTCAACAAC 60.259 41.667 32.29 2.98 0.00 3.32
118 119 3.854809 GGCGCGCTTTATTATTTCAACAA 59.145 39.130 32.29 0.00 0.00 2.83
119 120 3.430931 GGCGCGCTTTATTATTTCAACA 58.569 40.909 32.29 0.00 0.00 3.33
120 121 2.462565 CGGCGCGCTTTATTATTTCAAC 59.537 45.455 32.29 7.64 0.00 3.18
121 122 2.096174 ACGGCGCGCTTTATTATTTCAA 59.904 40.909 32.29 0.00 0.00 2.69
122 123 1.666700 ACGGCGCGCTTTATTATTTCA 59.333 42.857 32.29 0.00 0.00 2.69
123 124 2.034076 CACGGCGCGCTTTATTATTTC 58.966 47.619 32.29 8.93 0.00 2.17
124 125 1.666700 TCACGGCGCGCTTTATTATTT 59.333 42.857 32.29 1.56 0.00 1.40
125 126 1.292061 TCACGGCGCGCTTTATTATT 58.708 45.000 32.29 3.24 0.00 1.40
126 127 1.260561 CTTCACGGCGCGCTTTATTAT 59.739 47.619 32.29 5.73 0.00 1.28
127 128 0.648441 CTTCACGGCGCGCTTTATTA 59.352 50.000 32.29 11.33 0.00 0.98
128 129 1.423845 CTTCACGGCGCGCTTTATT 59.576 52.632 32.29 7.87 0.00 1.40
129 130 2.461110 CCTTCACGGCGCGCTTTAT 61.461 57.895 32.29 11.18 0.00 1.40
130 131 3.115892 CCTTCACGGCGCGCTTTA 61.116 61.111 32.29 11.52 0.00 1.85
139 140 1.860326 CTTTTTGCAAAGCCTTCACGG 59.140 47.619 12.41 0.00 33.19 4.94
140 141 2.808244 TCTTTTTGCAAAGCCTTCACG 58.192 42.857 12.41 0.00 39.56 4.35
141 142 5.544136 TTTTCTTTTTGCAAAGCCTTCAC 57.456 34.783 12.41 0.00 39.56 3.18
142 143 5.123661 CCTTTTTCTTTTTGCAAAGCCTTCA 59.876 36.000 12.41 0.00 39.56 3.02
143 144 5.449041 CCCTTTTTCTTTTTGCAAAGCCTTC 60.449 40.000 12.41 0.00 39.56 3.46
144 145 4.398988 CCCTTTTTCTTTTTGCAAAGCCTT 59.601 37.500 12.41 0.00 39.56 4.35
145 146 3.947196 CCCTTTTTCTTTTTGCAAAGCCT 59.053 39.130 12.41 0.00 39.56 4.58
146 147 3.066621 CCCCTTTTTCTTTTTGCAAAGCC 59.933 43.478 12.41 0.00 39.56 4.35
147 148 3.944650 TCCCCTTTTTCTTTTTGCAAAGC 59.055 39.130 12.41 0.00 39.56 3.51
148 149 6.507958 TTTCCCCTTTTTCTTTTTGCAAAG 57.492 33.333 12.41 1.49 40.91 2.77
149 150 6.901081 TTTTCCCCTTTTTCTTTTTGCAAA 57.099 29.167 8.05 8.05 0.00 3.68
150 151 6.571344 GCTTTTTCCCCTTTTTCTTTTTGCAA 60.571 34.615 0.00 0.00 0.00 4.08
151 152 5.105957 GCTTTTTCCCCTTTTTCTTTTTGCA 60.106 36.000 0.00 0.00 0.00 4.08
152 153 5.339990 GCTTTTTCCCCTTTTTCTTTTTGC 58.660 37.500 0.00 0.00 0.00 3.68
153 154 5.568482 CGCTTTTTCCCCTTTTTCTTTTTG 58.432 37.500 0.00 0.00 0.00 2.44
154 155 4.095782 GCGCTTTTTCCCCTTTTTCTTTTT 59.904 37.500 0.00 0.00 0.00 1.94
155 156 3.625764 GCGCTTTTTCCCCTTTTTCTTTT 59.374 39.130 0.00 0.00 0.00 2.27
156 157 3.202906 GCGCTTTTTCCCCTTTTTCTTT 58.797 40.909 0.00 0.00 0.00 2.52
157 158 2.169561 TGCGCTTTTTCCCCTTTTTCTT 59.830 40.909 9.73 0.00 0.00 2.52
158 159 1.760029 TGCGCTTTTTCCCCTTTTTCT 59.240 42.857 9.73 0.00 0.00 2.52
159 160 2.232756 TGCGCTTTTTCCCCTTTTTC 57.767 45.000 9.73 0.00 0.00 2.29
160 161 2.493035 CATGCGCTTTTTCCCCTTTTT 58.507 42.857 9.73 0.00 0.00 1.94
161 162 1.877680 GCATGCGCTTTTTCCCCTTTT 60.878 47.619 9.73 0.00 34.30 2.27
162 163 0.320683 GCATGCGCTTTTTCCCCTTT 60.321 50.000 9.73 0.00 34.30 3.11
163 164 1.293179 GCATGCGCTTTTTCCCCTT 59.707 52.632 9.73 0.00 34.30 3.95
164 165 2.973082 GCATGCGCTTTTTCCCCT 59.027 55.556 9.73 0.00 34.30 4.79
165 166 2.506881 CGCATGCGCTTTTTCCCC 60.507 61.111 29.09 0.00 35.30 4.81
166 167 1.801512 GACGCATGCGCTTTTTCCC 60.802 57.895 38.15 14.01 44.19 3.97
167 168 1.081509 TGACGCATGCGCTTTTTCC 60.082 52.632 38.15 18.53 44.19 3.13
168 169 0.660005 TGTGACGCATGCGCTTTTTC 60.660 50.000 38.15 27.08 44.19 2.29
169 170 0.248825 TTGTGACGCATGCGCTTTTT 60.249 45.000 38.15 20.17 44.19 1.94
170 171 0.248825 TTTGTGACGCATGCGCTTTT 60.249 45.000 38.15 20.59 44.19 2.27
171 172 0.934436 GTTTGTGACGCATGCGCTTT 60.934 50.000 38.15 21.00 44.19 3.51
172 173 1.370414 GTTTGTGACGCATGCGCTT 60.370 52.632 38.15 21.81 44.19 4.68
173 174 2.252260 GTTTGTGACGCATGCGCT 59.748 55.556 38.15 25.28 44.19 5.92
174 175 3.158813 CGTTTGTGACGCATGCGC 61.159 61.111 38.15 29.16 45.86 6.09
304 314 1.348008 GGCATGATCTCCTCCACCCA 61.348 60.000 0.00 0.00 0.00 4.51
328 338 6.833416 TGGAGTATTTATTGAAGTCCATTGGG 59.167 38.462 2.09 0.00 0.00 4.12
357 369 3.454587 TTTCAGGTGGCACGTCGCT 62.455 57.895 10.32 0.00 41.91 4.93
418 789 1.895707 GCACTGAGCACTGCTTGGT 60.896 57.895 4.67 4.63 44.79 3.67
455 829 2.623416 CAGGCGTAGACATGTCCATCTA 59.377 50.000 22.21 5.35 39.87 1.98
456 830 1.410517 CAGGCGTAGACATGTCCATCT 59.589 52.381 22.21 10.05 39.87 2.90
457 831 1.858091 CAGGCGTAGACATGTCCATC 58.142 55.000 22.21 11.57 39.87 3.51
458 832 0.179073 GCAGGCGTAGACATGTCCAT 60.179 55.000 22.21 7.54 39.87 3.41
480 854 2.663119 GCGTTTGATCTTGGATGTTTGC 59.337 45.455 0.00 0.00 0.00 3.68
481 855 3.899734 TGCGTTTGATCTTGGATGTTTG 58.100 40.909 0.00 0.00 0.00 2.93
579 955 1.563410 AGGGCCTCTTCCAGAAGAATG 59.437 52.381 0.00 6.84 45.75 2.67
751 1136 0.321653 TCTCGCAGGAAAAAGGCTCC 60.322 55.000 0.00 0.00 0.00 4.70
752 1137 1.466558 CTTCTCGCAGGAAAAAGGCTC 59.533 52.381 0.00 0.00 0.00 4.70
753 1138 1.528129 CTTCTCGCAGGAAAAAGGCT 58.472 50.000 0.00 0.00 0.00 4.58
754 1139 0.109551 GCTTCTCGCAGGAAAAAGGC 60.110 55.000 0.00 0.00 38.92 4.35
784 1169 3.836176 AACTCGTGGGCGTGACGTC 62.836 63.158 9.11 9.11 38.04 4.34
785 1170 3.836176 GAACTCGTGGGCGTGACGT 62.836 63.158 6.91 0.00 38.04 4.34
786 1171 3.103911 GAACTCGTGGGCGTGACG 61.104 66.667 0.00 0.00 39.49 4.35
787 1172 3.103911 CGAACTCGTGGGCGTGAC 61.104 66.667 0.00 0.00 39.49 3.67
809 1194 0.908505 GAAGAAGATCGTGACGACGC 59.091 55.000 10.91 5.62 45.68 5.19
812 1197 2.817844 TGGAAGAAGAAGATCGTGACGA 59.182 45.455 11.14 11.14 41.13 4.20
851 1241 1.134995 TCTATCTGCTGGTTGTGCGAG 60.135 52.381 0.00 0.00 0.00 5.03
897 1294 3.429547 GCCGTGATATCCGCAGAATATCT 60.430 47.826 0.00 0.00 35.17 1.98
902 1299 1.299850 CGCCGTGATATCCGCAGAA 60.300 57.895 0.00 0.00 0.00 3.02
903 1300 2.335011 CGCCGTGATATCCGCAGA 59.665 61.111 0.00 0.00 0.00 4.26
933 1335 4.309933 GCTCTCCCAACCAAATTTGAAAG 58.690 43.478 19.86 5.60 0.00 2.62
1244 1678 1.748122 GTACCTCAGCCCGTCGAGA 60.748 63.158 0.00 0.00 0.00 4.04
1274 1708 1.094073 GCTCGCTGCTGATGTTCCAT 61.094 55.000 0.00 0.00 38.95 3.41
1323 1757 3.680490 TGCAACCAACGGATCAAGAATA 58.320 40.909 0.00 0.00 0.00 1.75
1344 1778 5.587043 TGAATTTTACCTACGAATGCGGATT 59.413 36.000 0.12 0.12 43.17 3.01
1345 1779 5.120399 TGAATTTTACCTACGAATGCGGAT 58.880 37.500 0.00 0.00 43.17 4.18
1352 1786 9.443323 TCATCAGAATTGAATTTTACCTACGAA 57.557 29.630 0.00 0.00 36.78 3.85
1391 1826 2.319472 GCGGAAACAACAGCAGAATTC 58.681 47.619 0.00 0.00 0.00 2.17
1638 2073 0.961358 CTCGTGGAAGAGGAGACGGT 60.961 60.000 0.00 0.00 38.64 4.83
1643 2078 1.248486 TGTGACTCGTGGAAGAGGAG 58.752 55.000 0.00 0.00 42.31 3.69
1650 2085 1.444250 GGTGGTTGTGACTCGTGGA 59.556 57.895 0.00 0.00 0.00 4.02
1680 2115 2.618053 CACCGAAGACTGGTTATGGTC 58.382 52.381 0.00 0.00 37.72 4.02
1729 2166 2.598099 TGCCCGTCGTACAGGACA 60.598 61.111 0.00 0.00 36.73 4.02
1871 2308 4.549516 GTCGGGTAGCGAGACGGC 62.550 72.222 3.93 0.00 0.00 5.68
1882 2319 2.995574 CCCTTGAGGTCGTCGGGT 60.996 66.667 0.00 0.00 0.00 5.28
2000 2437 4.283432 ACTGCTGTTTCAGTGACGTACAC 61.283 47.826 9.30 9.30 44.88 2.90
2018 2455 4.455124 GTTTCGTGACAAATGAGTACTGC 58.545 43.478 0.00 0.00 0.00 4.40
2025 2462 7.142680 GGAAATTAAGGTTTCGTGACAAATGA 58.857 34.615 0.00 0.00 38.64 2.57
2027 2464 7.045126 TGGAAATTAAGGTTTCGTGACAAAT 57.955 32.000 0.00 0.00 38.64 2.32
2033 2470 6.007936 TGTGATGGAAATTAAGGTTTCGTG 57.992 37.500 0.00 0.00 38.64 4.35
2034 2471 6.642707 TTGTGATGGAAATTAAGGTTTCGT 57.357 33.333 0.00 0.00 38.64 3.85
2036 2473 9.487790 TCATTTTGTGATGGAAATTAAGGTTTC 57.512 29.630 0.00 0.00 37.37 2.78
2037 2474 9.844257 TTCATTTTGTGATGGAAATTAAGGTTT 57.156 25.926 0.00 0.00 36.54 3.27
2038 2475 9.492973 CTTCATTTTGTGATGGAAATTAAGGTT 57.507 29.630 0.00 0.00 36.54 3.50
2039 2476 8.869109 TCTTCATTTTGTGATGGAAATTAAGGT 58.131 29.630 0.00 0.00 36.54 3.50
2042 2479 9.487790 GGTTCTTCATTTTGTGATGGAAATTAA 57.512 29.630 0.00 0.00 36.54 1.40
2043 2480 7.812191 CGGTTCTTCATTTTGTGATGGAAATTA 59.188 33.333 0.00 0.00 36.54 1.40
2054 2512 3.243401 GGTCAAGCGGTTCTTCATTTTGT 60.243 43.478 0.00 0.00 31.27 2.83
2069 2527 2.033424 GCGAATTAATCAGGGGTCAAGC 59.967 50.000 0.00 0.00 0.00 4.01
2071 2529 3.278574 CAGCGAATTAATCAGGGGTCAA 58.721 45.455 0.00 0.00 0.00 3.18
2072 2530 2.917933 CAGCGAATTAATCAGGGGTCA 58.082 47.619 0.00 0.00 0.00 4.02
2073 2531 1.604278 GCAGCGAATTAATCAGGGGTC 59.396 52.381 0.00 0.00 0.00 4.46
2075 2533 0.954452 GGCAGCGAATTAATCAGGGG 59.046 55.000 0.00 0.00 0.00 4.79
2076 2534 0.588252 CGGCAGCGAATTAATCAGGG 59.412 55.000 0.00 0.00 0.00 4.45
2217 2697 6.652481 ACAAGTTCTTCAGATCATTTCATCGT 59.348 34.615 0.00 0.00 0.00 3.73
2243 2723 4.024893 CGCCGAGAACACTGCAAAATATAT 60.025 41.667 0.00 0.00 0.00 0.86
2244 2724 3.308595 CGCCGAGAACACTGCAAAATATA 59.691 43.478 0.00 0.00 0.00 0.86
2245 2725 2.095853 CGCCGAGAACACTGCAAAATAT 59.904 45.455 0.00 0.00 0.00 1.28
2249 2729 1.522806 ACGCCGAGAACACTGCAAA 60.523 52.632 0.00 0.00 0.00 3.68
2314 2794 0.248336 CACCGCATGCAGCTACATTG 60.248 55.000 19.57 0.00 42.61 2.82
2334 2819 2.457366 AGCTTAACACCCAAGTCTCG 57.543 50.000 0.00 0.00 0.00 4.04
2386 2874 4.570663 CCTGCGGACGGACGGATC 62.571 72.222 0.00 0.00 32.65 3.36
2391 2879 4.309950 ACCAACCTGCGGACGGAC 62.310 66.667 0.00 0.00 0.00 4.79
2392 2880 4.308458 CACCAACCTGCGGACGGA 62.308 66.667 0.00 0.00 0.00 4.69
2393 2881 4.619227 ACACCAACCTGCGGACGG 62.619 66.667 0.00 0.01 0.00 4.79
2394 2882 2.590575 AACACCAACCTGCGGACG 60.591 61.111 0.00 0.00 0.00 4.79
2398 2886 2.317609 CGAGGAACACCAACCTGCG 61.318 63.158 0.00 0.00 36.57 5.18
2503 2991 2.064762 CACTTCTTCTTGCGTGAGGAG 58.935 52.381 0.00 0.00 0.00 3.69
2536 3024 2.851824 CACCACGCTGAAAGAAAAACAC 59.148 45.455 0.00 0.00 34.07 3.32
2729 3217 4.367023 CGGGAAGTCGCGGTTGGA 62.367 66.667 6.13 0.00 46.57 3.53
2957 3445 1.872234 CGTACATGGACGGCGTCAG 60.872 63.158 37.13 27.79 39.19 3.51
3341 3832 5.163561 GGAGACTAGCACTAGCATGATATCC 60.164 48.000 0.00 0.00 45.49 2.59
3353 3849 1.889530 GCCGGTTGGAGACTAGCACT 61.890 60.000 1.90 0.00 37.49 4.40
3354 3850 1.448013 GCCGGTTGGAGACTAGCAC 60.448 63.158 1.90 0.00 37.49 4.40
3416 3912 4.754372 TCAACACTGTCAATGCAATCTC 57.246 40.909 0.00 0.00 0.00 2.75
3427 3923 6.512415 GCCTTGCTATCATATTCAACACTGTC 60.512 42.308 0.00 0.00 0.00 3.51
3515 4032 3.369756 TGTAATCGAACAAAGCCTAAGCG 59.630 43.478 0.00 0.00 46.67 4.68
3516 4033 4.436986 GGTGTAATCGAACAAAGCCTAAGC 60.437 45.833 0.00 0.00 40.32 3.09
3517 4034 4.935808 AGGTGTAATCGAACAAAGCCTAAG 59.064 41.667 0.00 0.00 0.00 2.18
3518 4035 4.901868 AGGTGTAATCGAACAAAGCCTAA 58.098 39.130 0.00 0.00 0.00 2.69
3519 4036 4.501071 GAGGTGTAATCGAACAAAGCCTA 58.499 43.478 0.00 0.00 0.00 3.93
3520 4037 3.335579 GAGGTGTAATCGAACAAAGCCT 58.664 45.455 0.00 0.00 0.00 4.58
3521 4038 2.418976 GGAGGTGTAATCGAACAAAGCC 59.581 50.000 0.00 0.00 0.00 4.35
3522 4039 3.335579 AGGAGGTGTAATCGAACAAAGC 58.664 45.455 0.00 0.00 0.00 3.51
3523 4040 4.389077 GTGAGGAGGTGTAATCGAACAAAG 59.611 45.833 0.00 0.00 0.00 2.77
3524 4041 4.202274 TGTGAGGAGGTGTAATCGAACAAA 60.202 41.667 0.00 0.00 0.00 2.83
3525 4042 3.322541 TGTGAGGAGGTGTAATCGAACAA 59.677 43.478 0.00 0.00 0.00 2.83
3526 4043 2.894765 TGTGAGGAGGTGTAATCGAACA 59.105 45.455 0.00 0.00 0.00 3.18
3527 4044 3.512680 CTGTGAGGAGGTGTAATCGAAC 58.487 50.000 0.00 0.00 0.00 3.95
3528 4045 2.496070 CCTGTGAGGAGGTGTAATCGAA 59.504 50.000 0.00 0.00 37.67 3.71
3529 4046 2.100197 CCTGTGAGGAGGTGTAATCGA 58.900 52.381 0.00 0.00 37.67 3.59
3530 4047 1.137086 CCCTGTGAGGAGGTGTAATCG 59.863 57.143 0.00 0.00 37.67 3.34
3531 4048 1.486726 CCCCTGTGAGGAGGTGTAATC 59.513 57.143 0.00 0.00 37.67 1.75
3532 4049 1.584724 CCCCTGTGAGGAGGTGTAAT 58.415 55.000 0.00 0.00 37.67 1.89
3533 4050 0.546747 CCCCCTGTGAGGAGGTGTAA 60.547 60.000 0.00 0.00 37.67 2.41
3534 4051 1.080354 CCCCCTGTGAGGAGGTGTA 59.920 63.158 0.00 0.00 37.67 2.90
3535 4052 2.125066 ATCCCCCTGTGAGGAGGTGT 62.125 60.000 0.00 0.00 37.67 4.16
3536 4053 0.916358 AATCCCCCTGTGAGGAGGTG 60.916 60.000 0.00 0.00 37.67 4.00
3537 4054 0.916358 CAATCCCCCTGTGAGGAGGT 60.916 60.000 0.00 0.00 37.67 3.85
3538 4055 1.639635 CCAATCCCCCTGTGAGGAGG 61.640 65.000 0.00 0.00 37.67 4.30
3539 4056 1.639635 CCCAATCCCCCTGTGAGGAG 61.640 65.000 0.00 0.00 37.67 3.69
3540 4057 1.619363 CCCAATCCCCCTGTGAGGA 60.619 63.158 0.00 0.00 37.67 3.71
3541 4058 2.693871 CCCCAATCCCCCTGTGAGG 61.694 68.421 0.00 0.00 34.30 3.86
3542 4059 1.930656 ACCCCAATCCCCCTGTGAG 60.931 63.158 0.00 0.00 0.00 3.51
3543 4060 2.212761 ACCCCAATCCCCCTGTGA 59.787 61.111 0.00 0.00 0.00 3.58
3544 4061 2.360191 CACCCCAATCCCCCTGTG 59.640 66.667 0.00 0.00 0.00 3.66
3545 4062 2.823662 ATCCACCCCAATCCCCCTGT 62.824 60.000 0.00 0.00 0.00 4.00
3546 4063 1.593166 AATCCACCCCAATCCCCCTG 61.593 60.000 0.00 0.00 0.00 4.45
3547 4064 1.230956 AATCCACCCCAATCCCCCT 60.231 57.895 0.00 0.00 0.00 4.79
3548 4065 1.075301 CAATCCACCCCAATCCCCC 60.075 63.158 0.00 0.00 0.00 5.40
3549 4066 1.075301 CCAATCCACCCCAATCCCC 60.075 63.158 0.00 0.00 0.00 4.81
3550 4067 0.106015 CTCCAATCCACCCCAATCCC 60.106 60.000 0.00 0.00 0.00 3.85
3551 4068 0.106015 CCTCCAATCCACCCCAATCC 60.106 60.000 0.00 0.00 0.00 3.01
3552 4069 0.926293 TCCTCCAATCCACCCCAATC 59.074 55.000 0.00 0.00 0.00 2.67
3553 4070 0.929244 CTCCTCCAATCCACCCCAAT 59.071 55.000 0.00 0.00 0.00 3.16
3554 4071 1.214305 CCTCCTCCAATCCACCCCAA 61.214 60.000 0.00 0.00 0.00 4.12
3555 4072 1.619363 CCTCCTCCAATCCACCCCA 60.619 63.158 0.00 0.00 0.00 4.96
3556 4073 1.214992 AACCTCCTCCAATCCACCCC 61.215 60.000 0.00 0.00 0.00 4.95
3557 4074 0.704664 AAACCTCCTCCAATCCACCC 59.295 55.000 0.00 0.00 0.00 4.61
3558 4075 2.171003 CAAAACCTCCTCCAATCCACC 58.829 52.381 0.00 0.00 0.00 4.61
3559 4076 2.820197 GTCAAAACCTCCTCCAATCCAC 59.180 50.000 0.00 0.00 0.00 4.02
3560 4077 2.716424 AGTCAAAACCTCCTCCAATCCA 59.284 45.455 0.00 0.00 0.00 3.41
3561 4078 3.441500 AGTCAAAACCTCCTCCAATCC 57.558 47.619 0.00 0.00 0.00 3.01
3562 4079 4.657013 AGAAGTCAAAACCTCCTCCAATC 58.343 43.478 0.00 0.00 0.00 2.67
3563 4080 4.731313 AGAAGTCAAAACCTCCTCCAAT 57.269 40.909 0.00 0.00 0.00 3.16
3564 4081 4.905456 TCTAGAAGTCAAAACCTCCTCCAA 59.095 41.667 0.00 0.00 0.00 3.53
3565 4082 4.489737 TCTAGAAGTCAAAACCTCCTCCA 58.510 43.478 0.00 0.00 0.00 3.86
3566 4083 4.081365 CCTCTAGAAGTCAAAACCTCCTCC 60.081 50.000 0.00 0.00 0.00 4.30
3567 4084 4.773149 TCCTCTAGAAGTCAAAACCTCCTC 59.227 45.833 0.00 0.00 0.00 3.71
3568 4085 4.753186 TCCTCTAGAAGTCAAAACCTCCT 58.247 43.478 0.00 0.00 0.00 3.69
3569 4086 5.046231 ACATCCTCTAGAAGTCAAAACCTCC 60.046 44.000 0.00 0.00 0.00 4.30
3570 4087 6.043854 ACATCCTCTAGAAGTCAAAACCTC 57.956 41.667 0.00 0.00 0.00 3.85
3571 4088 7.554959 TTACATCCTCTAGAAGTCAAAACCT 57.445 36.000 0.00 0.00 0.00 3.50
3572 4089 7.496263 GGATTACATCCTCTAGAAGTCAAAACC 59.504 40.741 0.00 0.00 46.19 3.27
3573 4090 8.426881 GGATTACATCCTCTAGAAGTCAAAAC 57.573 38.462 0.00 0.00 46.19 2.43
3589 4106 2.108952 AGGGATTGGCAGGGATTACATC 59.891 50.000 0.00 0.00 0.00 3.06
3590 4107 2.146998 AGGGATTGGCAGGGATTACAT 58.853 47.619 0.00 0.00 0.00 2.29
3591 4108 1.215173 CAGGGATTGGCAGGGATTACA 59.785 52.381 0.00 0.00 0.00 2.41
3592 4109 1.215423 ACAGGGATTGGCAGGGATTAC 59.785 52.381 0.00 0.00 0.00 1.89
3593 4110 1.494721 GACAGGGATTGGCAGGGATTA 59.505 52.381 0.00 0.00 33.76 1.75
3594 4111 0.259938 GACAGGGATTGGCAGGGATT 59.740 55.000 0.00 0.00 33.76 3.01
3595 4112 0.920763 TGACAGGGATTGGCAGGGAT 60.921 55.000 0.00 0.00 40.88 3.85
3596 4113 1.541118 TGACAGGGATTGGCAGGGA 60.541 57.895 0.00 0.00 40.88 4.20
3597 4114 3.089838 TGACAGGGATTGGCAGGG 58.910 61.111 0.00 0.00 40.88 4.45
3600 4117 0.541764 GGGTTTGACAGGGATTGGCA 60.542 55.000 0.00 0.00 45.27 4.92
3601 4118 0.251787 AGGGTTTGACAGGGATTGGC 60.252 55.000 0.00 0.00 34.37 4.52
3602 4119 2.309136 AAGGGTTTGACAGGGATTGG 57.691 50.000 0.00 0.00 0.00 3.16
3603 4120 3.230134 TGAAAGGGTTTGACAGGGATTG 58.770 45.455 0.00 0.00 0.00 2.67
3604 4121 3.611025 TGAAAGGGTTTGACAGGGATT 57.389 42.857 0.00 0.00 0.00 3.01
3605 4122 3.833559 ATGAAAGGGTTTGACAGGGAT 57.166 42.857 0.00 0.00 0.00 3.85
3606 4123 3.611025 AATGAAAGGGTTTGACAGGGA 57.389 42.857 0.00 0.00 0.00 4.20
3607 4124 4.687901 AAAATGAAAGGGTTTGACAGGG 57.312 40.909 0.00 0.00 0.00 4.45
3608 4125 5.056480 GGAAAAATGAAAGGGTTTGACAGG 58.944 41.667 0.00 0.00 0.00 4.00
3609 4126 5.754890 CAGGAAAAATGAAAGGGTTTGACAG 59.245 40.000 0.00 0.00 0.00 3.51
3610 4127 5.188751 ACAGGAAAAATGAAAGGGTTTGACA 59.811 36.000 0.00 0.00 0.00 3.58
3611 4128 5.670485 ACAGGAAAAATGAAAGGGTTTGAC 58.330 37.500 0.00 0.00 0.00 3.18
3612 4129 5.423610 TGACAGGAAAAATGAAAGGGTTTGA 59.576 36.000 0.00 0.00 0.00 2.69
3613 4130 5.669477 TGACAGGAAAAATGAAAGGGTTTG 58.331 37.500 0.00 0.00 0.00 2.93
3614 4131 5.948742 TGACAGGAAAAATGAAAGGGTTT 57.051 34.783 0.00 0.00 0.00 3.27
3615 4132 5.396324 GGTTGACAGGAAAAATGAAAGGGTT 60.396 40.000 0.00 0.00 0.00 4.11
3616 4133 4.100963 GGTTGACAGGAAAAATGAAAGGGT 59.899 41.667 0.00 0.00 0.00 4.34
3617 4134 4.631131 GGTTGACAGGAAAAATGAAAGGG 58.369 43.478 0.00 0.00 0.00 3.95
3618 4135 4.037446 TCGGTTGACAGGAAAAATGAAAGG 59.963 41.667 0.00 0.00 0.00 3.11
3619 4136 5.181690 TCGGTTGACAGGAAAAATGAAAG 57.818 39.130 0.00 0.00 0.00 2.62
3620 4137 5.105716 TGTTCGGTTGACAGGAAAAATGAAA 60.106 36.000 0.00 0.00 0.00 2.69
3621 4138 4.399618 TGTTCGGTTGACAGGAAAAATGAA 59.600 37.500 0.00 0.00 0.00 2.57
3622 4139 3.948473 TGTTCGGTTGACAGGAAAAATGA 59.052 39.130 0.00 0.00 0.00 2.57
3623 4140 4.290155 CTGTTCGGTTGACAGGAAAAATG 58.710 43.478 0.00 0.00 40.58 2.32
3624 4141 4.568152 CTGTTCGGTTGACAGGAAAAAT 57.432 40.909 0.00 0.00 40.58 1.82
3631 4148 1.966451 GGGCCTGTTCGGTTGACAG 60.966 63.158 0.84 0.00 43.19 3.51
3632 4149 1.990160 AAGGGCCTGTTCGGTTGACA 61.990 55.000 6.92 0.00 34.25 3.58
3633 4150 0.035739 TAAGGGCCTGTTCGGTTGAC 59.964 55.000 6.92 0.00 34.25 3.18
3634 4151 0.988832 ATAAGGGCCTGTTCGGTTGA 59.011 50.000 6.92 0.00 34.25 3.18
3635 4152 1.094785 CATAAGGGCCTGTTCGGTTG 58.905 55.000 6.92 0.00 34.25 3.77
3636 4153 0.988832 TCATAAGGGCCTGTTCGGTT 59.011 50.000 6.92 0.00 34.25 4.44
3637 4154 0.541863 CTCATAAGGGCCTGTTCGGT 59.458 55.000 6.92 0.00 34.25 4.69
3638 4155 0.541863 ACTCATAAGGGCCTGTTCGG 59.458 55.000 6.92 0.11 0.00 4.30
3639 4156 3.536956 TTACTCATAAGGGCCTGTTCG 57.463 47.619 6.92 0.00 0.00 3.95
3640 4157 4.141482 TGGATTACTCATAAGGGCCTGTTC 60.141 45.833 6.92 0.00 0.00 3.18
3641 4158 3.785887 TGGATTACTCATAAGGGCCTGTT 59.214 43.478 6.92 0.00 0.00 3.16
3642 4159 3.393687 TGGATTACTCATAAGGGCCTGT 58.606 45.455 6.92 2.02 0.00 4.00
3643 4160 4.137543 GTTGGATTACTCATAAGGGCCTG 58.862 47.826 6.92 0.00 0.00 4.85
3644 4161 3.138468 GGTTGGATTACTCATAAGGGCCT 59.862 47.826 0.00 0.00 0.00 5.19
3645 4162 3.117663 TGGTTGGATTACTCATAAGGGCC 60.118 47.826 0.00 0.00 0.00 5.80
3646 4163 4.164843 TGGTTGGATTACTCATAAGGGC 57.835 45.455 0.00 0.00 0.00 5.19
3647 4164 7.475137 TTTTTGGTTGGATTACTCATAAGGG 57.525 36.000 0.00 0.00 0.00 3.95
3671 4188 7.210873 TCCGGTTTGCTTTGTATTTGTAATTT 58.789 30.769 0.00 0.00 0.00 1.82
3687 4204 0.035739 TGTCCTAGGTTCCGGTTTGC 59.964 55.000 9.08 0.00 0.00 3.68
3688 4205 1.346722 AGTGTCCTAGGTTCCGGTTTG 59.653 52.381 9.08 0.00 0.00 2.93
3692 4212 0.531200 GACAGTGTCCTAGGTTCCGG 59.469 60.000 12.54 0.00 0.00 5.14
3728 4248 4.340666 TGCTTTTTACACAAATCTGCAGGA 59.659 37.500 15.13 0.57 0.00 3.86
3730 4250 5.284079 AGTGCTTTTTACACAAATCTGCAG 58.716 37.500 7.63 7.63 40.59 4.41
3731 4251 5.261209 AGTGCTTTTTACACAAATCTGCA 57.739 34.783 0.00 0.00 40.59 4.41
3732 4252 6.438763 AGTAGTGCTTTTTACACAAATCTGC 58.561 36.000 0.00 0.00 40.59 4.26
3733 4253 7.078228 GGAGTAGTGCTTTTTACACAAATCTG 58.922 38.462 0.00 0.00 40.59 2.90
3734 4254 6.206829 GGGAGTAGTGCTTTTTACACAAATCT 59.793 38.462 0.00 0.00 40.59 2.40
3735 4255 6.206829 AGGGAGTAGTGCTTTTTACACAAATC 59.793 38.462 0.00 0.00 40.59 2.17
3736 4256 6.068670 AGGGAGTAGTGCTTTTTACACAAAT 58.931 36.000 0.00 0.00 40.59 2.32
3737 4257 5.442391 AGGGAGTAGTGCTTTTTACACAAA 58.558 37.500 0.00 0.00 40.59 2.83
3738 4258 5.043737 AGGGAGTAGTGCTTTTTACACAA 57.956 39.130 0.00 0.00 40.59 3.33
3739 4259 4.699925 AGGGAGTAGTGCTTTTTACACA 57.300 40.909 0.00 0.00 40.59 3.72
3740 4260 4.151867 CGAAGGGAGTAGTGCTTTTTACAC 59.848 45.833 0.00 0.00 38.35 2.90
3741 4261 4.202284 ACGAAGGGAGTAGTGCTTTTTACA 60.202 41.667 0.00 0.00 0.00 2.41
3742 4262 4.313282 ACGAAGGGAGTAGTGCTTTTTAC 58.687 43.478 0.00 0.00 0.00 2.01
3743 4263 4.282703 AGACGAAGGGAGTAGTGCTTTTTA 59.717 41.667 0.00 0.00 0.00 1.52
3744 4264 3.071167 AGACGAAGGGAGTAGTGCTTTTT 59.929 43.478 0.00 0.00 0.00 1.94
3745 4265 2.633481 AGACGAAGGGAGTAGTGCTTTT 59.367 45.455 0.00 0.00 0.00 2.27
3746 4266 2.231721 GAGACGAAGGGAGTAGTGCTTT 59.768 50.000 0.00 0.00 0.00 3.51
3747 4267 1.819903 GAGACGAAGGGAGTAGTGCTT 59.180 52.381 0.00 0.00 0.00 3.91
3760 4280 6.537301 ACCAGCGATATTTATTTTGAGACGAA 59.463 34.615 0.00 0.00 0.00 3.85
3761 4281 6.046593 ACCAGCGATATTTATTTTGAGACGA 58.953 36.000 0.00 0.00 0.00 4.20
3762 4282 6.287107 ACCAGCGATATTTATTTTGAGACG 57.713 37.500 0.00 0.00 0.00 4.18
3763 4283 9.651718 CTAAACCAGCGATATTTATTTTGAGAC 57.348 33.333 0.00 0.00 0.00 3.36
3764 4284 9.391006 ACTAAACCAGCGATATTTATTTTGAGA 57.609 29.630 0.00 0.00 0.00 3.27
3772 4292 8.842280 CCCAAAATACTAAACCAGCGATATTTA 58.158 33.333 0.00 0.00 0.00 1.40
3773 4293 7.558444 TCCCAAAATACTAAACCAGCGATATTT 59.442 33.333 0.00 0.00 0.00 1.40
3774 4294 7.012989 GTCCCAAAATACTAAACCAGCGATATT 59.987 37.037 0.00 0.00 0.00 1.28
3777 4297 4.638865 GTCCCAAAATACTAAACCAGCGAT 59.361 41.667 0.00 0.00 0.00 4.58
3784 4304 2.096335 CCGCCGTCCCAAAATACTAAAC 59.904 50.000 0.00 0.00 0.00 2.01
3803 4323 3.240302 ACTCCCTCCAAATATACTCCCG 58.760 50.000 0.00 0.00 0.00 5.14
3804 4324 8.625467 AATATACTCCCTCCAAATATACTCCC 57.375 38.462 0.00 0.00 0.00 4.30
3805 4325 9.892130 CAAATATACTCCCTCCAAATATACTCC 57.108 37.037 0.00 0.00 0.00 3.85
3814 4334 9.170890 AGATTATCACAAATATACTCCCTCCAA 57.829 33.333 0.00 0.00 0.00 3.53
3830 6169 7.653311 CGACATTCACCAGATAAGATTATCACA 59.347 37.037 13.57 0.00 41.52 3.58
3832 6171 7.154656 CCGACATTCACCAGATAAGATTATCA 58.845 38.462 13.57 0.00 41.52 2.15
3835 6174 5.070446 AGCCGACATTCACCAGATAAGATTA 59.930 40.000 0.00 0.00 0.00 1.75
3839 6178 2.868583 CAGCCGACATTCACCAGATAAG 59.131 50.000 0.00 0.00 0.00 1.73
3842 6181 0.904649 TCAGCCGACATTCACCAGAT 59.095 50.000 0.00 0.00 0.00 2.90
3845 6184 1.071542 TCTTTCAGCCGACATTCACCA 59.928 47.619 0.00 0.00 0.00 4.17
3847 6186 1.734465 CCTCTTTCAGCCGACATTCAC 59.266 52.381 0.00 0.00 0.00 3.18
3848 6187 1.339055 CCCTCTTTCAGCCGACATTCA 60.339 52.381 0.00 0.00 0.00 2.57
3849 6188 1.066143 TCCCTCTTTCAGCCGACATTC 60.066 52.381 0.00 0.00 0.00 2.67
3850 6189 0.984230 TCCCTCTTTCAGCCGACATT 59.016 50.000 0.00 0.00 0.00 2.71
3851 6190 1.134280 CATCCCTCTTTCAGCCGACAT 60.134 52.381 0.00 0.00 0.00 3.06
3852 6191 0.250234 CATCCCTCTTTCAGCCGACA 59.750 55.000 0.00 0.00 0.00 4.35
3853 6192 0.250513 ACATCCCTCTTTCAGCCGAC 59.749 55.000 0.00 0.00 0.00 4.79
3854 6193 0.537188 GACATCCCTCTTTCAGCCGA 59.463 55.000 0.00 0.00 0.00 5.54
3855 6194 0.250234 TGACATCCCTCTTTCAGCCG 59.750 55.000 0.00 0.00 0.00 5.52
3856 6195 2.489722 GTTTGACATCCCTCTTTCAGCC 59.510 50.000 0.00 0.00 0.00 4.85
3857 6196 2.160417 CGTTTGACATCCCTCTTTCAGC 59.840 50.000 0.00 0.00 0.00 4.26
3858 6197 3.664107 TCGTTTGACATCCCTCTTTCAG 58.336 45.455 0.00 0.00 0.00 3.02
3859 6198 3.762407 TCGTTTGACATCCCTCTTTCA 57.238 42.857 0.00 0.00 0.00 2.69
3860 6199 3.120649 CGTTCGTTTGACATCCCTCTTTC 60.121 47.826 0.00 0.00 0.00 2.62
3861 6200 2.806244 CGTTCGTTTGACATCCCTCTTT 59.194 45.455 0.00 0.00 0.00 2.52
3862 6201 2.413837 CGTTCGTTTGACATCCCTCTT 58.586 47.619 0.00 0.00 0.00 2.85
3871 6217 2.372350 CAGGAAAAGCGTTCGTTTGAC 58.628 47.619 0.00 0.00 0.00 3.18
3872 6218 1.268335 GCAGGAAAAGCGTTCGTTTGA 60.268 47.619 0.00 0.00 0.00 2.69
3876 6222 0.814010 ACTGCAGGAAAAGCGTTCGT 60.814 50.000 19.93 0.00 33.85 3.85
3879 6225 2.959507 AAAACTGCAGGAAAAGCGTT 57.040 40.000 19.93 0.00 32.89 4.84
3882 6228 5.398416 CGTTTACTAAAACTGCAGGAAAAGC 59.602 40.000 19.93 3.74 42.39 3.51
3886 6232 6.680874 TTTCGTTTACTAAAACTGCAGGAA 57.319 33.333 19.93 4.13 42.39 3.36
3890 6236 6.199342 GGCATTTTTCGTTTACTAAAACTGCA 59.801 34.615 23.35 0.00 45.51 4.41
3921 6299 8.315391 TCAGAATAACATGACAGTTTCTTGAG 57.685 34.615 0.00 0.00 34.22 3.02
3923 6301 8.777413 TCTTCAGAATAACATGACAGTTTCTTG 58.223 33.333 0.00 0.00 35.83 3.02
3930 6308 8.092521 ACAACTTCTTCAGAATAACATGACAG 57.907 34.615 0.00 0.00 33.01 3.51
3935 6313 7.337942 GGGATGACAACTTCTTCAGAATAACAT 59.662 37.037 0.00 0.00 33.01 2.71
3943 6321 2.350522 CGGGGATGACAACTTCTTCAG 58.649 52.381 0.00 0.00 31.26 3.02
3945 6323 1.087501 GCGGGGATGACAACTTCTTC 58.912 55.000 0.00 0.00 0.00 2.87
3946 6324 0.400213 TGCGGGGATGACAACTTCTT 59.600 50.000 0.00 0.00 0.00 2.52
3947 6325 0.400213 TTGCGGGGATGACAACTTCT 59.600 50.000 0.00 0.00 0.00 2.85
3952 6330 2.554893 GTTTTAGTTGCGGGGATGACAA 59.445 45.455 0.00 0.00 0.00 3.18
3962 6340 1.442017 GCTGGCGGTTTTAGTTGCG 60.442 57.895 0.00 0.00 0.00 4.85
3963 6341 1.442017 CGCTGGCGGTTTTAGTTGC 60.442 57.895 7.12 0.00 35.56 4.17
3973 6351 2.399611 GAACGATTTCGCTGGCGG 59.600 61.111 14.94 1.16 44.43 6.13
3983 6361 2.482721 GTGGGTGACATTTCGAACGATT 59.517 45.455 0.00 0.00 0.00 3.34
3990 6368 2.341257 CTGAGAGTGGGTGACATTTCG 58.659 52.381 0.00 0.00 0.00 3.46
4003 6381 4.535425 CGAACGTTCGCTGAGAGT 57.465 55.556 34.54 0.00 44.26 3.24
4020 6398 4.855715 AAAAAGAGCCTTCTTAGTTGGC 57.144 40.909 9.38 9.38 42.80 4.52
4024 6402 9.143155 TCCAAAAATAAAAAGAGCCTTCTTAGT 57.857 29.630 0.00 0.00 42.80 2.24
4045 6423 9.905713 ATCTACTAGAACATGCTTAAATCCAAA 57.094 29.630 0.00 0.00 0.00 3.28
4046 6424 9.547753 GATCTACTAGAACATGCTTAAATCCAA 57.452 33.333 0.00 0.00 0.00 3.53
4047 6425 7.867909 CGATCTACTAGAACATGCTTAAATCCA 59.132 37.037 0.00 0.00 0.00 3.41
4048 6426 7.329717 CCGATCTACTAGAACATGCTTAAATCC 59.670 40.741 0.00 0.00 0.00 3.01
4073 6451 3.368013 CGAGGAAATTTGGGTTTTAGGCC 60.368 47.826 0.00 0.00 0.00 5.19
4104 6482 7.444487 GCTAGTGGAGAAAAGTTTTAGGAGAAA 59.556 37.037 0.00 0.00 0.00 2.52
4132 6510 8.319146 AGAAGTGCCTACTCTAGACTATATCTC 58.681 40.741 0.00 0.00 35.97 2.75
4167 6545 4.708421 AGGAAGCAATGCAACACATATCTT 59.292 37.500 8.35 0.00 38.34 2.40
4173 6551 0.032403 GCAGGAAGCAATGCAACACA 59.968 50.000 8.35 0.00 44.79 3.72
4194 6572 4.084888 GCGGGAAAGTTGCGGACG 62.085 66.667 0.00 0.00 0.00 4.79
4232 6610 1.376424 CAGTGGCAAGGTGAGCGAT 60.376 57.895 0.00 0.00 0.00 4.58
4265 6643 1.087202 TTCCATTCCGCCAATCGTCG 61.087 55.000 0.00 0.00 36.19 5.12
4267 6645 1.094785 CTTTCCATTCCGCCAATCGT 58.905 50.000 0.00 0.00 36.19 3.73
4268 6646 0.248621 GCTTTCCATTCCGCCAATCG 60.249 55.000 0.00 0.00 38.08 3.34
4271 6649 0.965363 GAGGCTTTCCATTCCGCCAA 60.965 55.000 0.00 0.00 44.85 4.52
4272 6650 1.378514 GAGGCTTTCCATTCCGCCA 60.379 57.895 0.00 0.00 44.85 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.