Multiple sequence alignment - TraesCS6A01G144400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G144400 chr6A 100.000 3172 0 0 1 3172 121670252 121673423 0.000000e+00 5858
1 TraesCS6A01G144400 chr6A 90.526 475 45 0 2451 2925 558144428 558143954 2.080000e-176 628
2 TraesCS6A01G144400 chr6A 94.595 111 6 0 27 137 592411730 592411840 4.210000e-39 172
3 TraesCS6A01G144400 chr6B 96.512 1634 55 1 1299 2930 707973768 707975401 0.000000e+00 2700
4 TraesCS6A01G144400 chr6B 95.273 1650 50 6 932 2560 139417825 139416183 0.000000e+00 2590
5 TraesCS6A01G144400 chr6B 90.397 479 45 1 2451 2928 100913492 100913014 2.080000e-176 628
6 TraesCS6A01G144400 chr5D 94.562 1600 79 5 861 2454 409714914 409716511 0.000000e+00 2466
7 TraesCS6A01G144400 chr5D 93.379 1601 97 6 861 2454 564867609 564869207 0.000000e+00 2361
8 TraesCS6A01G144400 chr5D 94.652 374 20 0 2560 2933 409717102 409717475 5.900000e-162 580
9 TraesCS6A01G144400 chrUn 94.361 1596 83 4 865 2454 70175586 70173992 0.000000e+00 2442
10 TraesCS6A01G144400 chr7D 94.125 1600 87 4 861 2454 575648967 575650565 0.000000e+00 2427
11 TraesCS6A01G144400 chr7D 90.435 115 9 2 25 137 563456921 563457035 1.970000e-32 150
12 TraesCS6A01G144400 chr3D 94.092 1591 87 4 870 2454 419635771 419634182 0.000000e+00 2410
13 TraesCS6A01G144400 chr3D 93.989 1597 85 5 864 2454 355119290 355117699 0.000000e+00 2407
14 TraesCS6A01G144400 chr2B 96.830 1262 36 3 932 2193 652607743 652606486 0.000000e+00 2106
15 TraesCS6A01G144400 chr2B 97.765 358 8 0 2568 2925 652605654 652605297 4.500000e-173 617
16 TraesCS6A01G144400 chr2B 97.846 325 7 0 2236 2560 652606485 652606161 2.140000e-156 562
17 TraesCS6A01G144400 chr2A 97.143 630 17 1 200 828 744806437 744805808 0.000000e+00 1062
18 TraesCS6A01G144400 chr2A 90.526 475 45 0 2451 2925 439794686 439794212 2.080000e-176 628
19 TraesCS6A01G144400 chr2A 95.526 380 14 2 2549 2925 744804137 744803758 3.500000e-169 604
20 TraesCS6A01G144400 chr2A 90.064 312 31 0 520 831 133643436 133643125 3.810000e-109 405
21 TraesCS6A01G144400 chr2A 91.892 111 9 0 27 137 762899745 762899635 4.240000e-34 156
22 TraesCS6A01G144400 chr3A 90.737 475 44 0 2451 2925 27733110 27733584 4.460000e-178 634
23 TraesCS6A01G144400 chr3A 88.673 309 35 0 520 828 98513748 98513440 8.310000e-101 377
24 TraesCS6A01G144400 chr1A 89.571 489 44 3 2451 2933 8169129 8169616 5.810000e-172 614
25 TraesCS6A01G144400 chr1A 86.774 310 41 0 514 823 177472548 177472857 2.340000e-91 346
26 TraesCS6A01G144400 chr7B 90.492 305 29 0 520 824 415326191 415326495 1.370000e-108 403
27 TraesCS6A01G144400 chr7B 88.704 301 33 1 200 499 745610226 745610526 1.800000e-97 366
28 TraesCS6A01G144400 chr7B 92.857 112 7 1 27 137 743433129 743433018 9.110000e-36 161
29 TraesCS6A01G144400 chr6D 89.577 307 31 1 200 505 97145686 97145380 3.840000e-104 388
30 TraesCS6A01G144400 chr6D 88.489 139 8 6 3023 3156 101211784 101211919 9.110000e-36 161
31 TraesCS6A01G144400 chr2D 88.235 306 35 1 200 504 88612112 88612417 6.470000e-97 364
32 TraesCS6A01G144400 chr2D 91.818 110 9 0 28 137 467118764 467118655 1.520000e-33 154
33 TraesCS6A01G144400 chr4B 94.595 111 6 0 27 137 575617177 575617067 4.210000e-39 172
34 TraesCS6A01G144400 chr3B 94.595 111 6 0 27 137 10322335 10322445 4.210000e-39 172
35 TraesCS6A01G144400 chr5B 91.892 111 9 0 27 137 629274455 629274565 4.240000e-34 156
36 TraesCS6A01G144400 chr1D 91.304 115 8 2 25 137 3353549 3353435 4.240000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G144400 chr6A 121670252 121673423 3171 False 5858 5858 100.000000 1 3172 1 chr6A.!!$F1 3171
1 TraesCS6A01G144400 chr6B 707973768 707975401 1633 False 2700 2700 96.512000 1299 2930 1 chr6B.!!$F1 1631
2 TraesCS6A01G144400 chr6B 139416183 139417825 1642 True 2590 2590 95.273000 932 2560 1 chr6B.!!$R2 1628
3 TraesCS6A01G144400 chr5D 564867609 564869207 1598 False 2361 2361 93.379000 861 2454 1 chr5D.!!$F1 1593
4 TraesCS6A01G144400 chr5D 409714914 409717475 2561 False 1523 2466 94.607000 861 2933 2 chr5D.!!$F2 2072
5 TraesCS6A01G144400 chrUn 70173992 70175586 1594 True 2442 2442 94.361000 865 2454 1 chrUn.!!$R1 1589
6 TraesCS6A01G144400 chr7D 575648967 575650565 1598 False 2427 2427 94.125000 861 2454 1 chr7D.!!$F2 1593
7 TraesCS6A01G144400 chr3D 419634182 419635771 1589 True 2410 2410 94.092000 870 2454 1 chr3D.!!$R2 1584
8 TraesCS6A01G144400 chr3D 355117699 355119290 1591 True 2407 2407 93.989000 864 2454 1 chr3D.!!$R1 1590
9 TraesCS6A01G144400 chr2B 652605297 652607743 2446 True 1095 2106 97.480333 932 2925 3 chr2B.!!$R1 1993
10 TraesCS6A01G144400 chr2A 744803758 744806437 2679 True 833 1062 96.334500 200 2925 2 chr2A.!!$R4 2725

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 0.036388 TTGAACAGAGGATGCGGGAC 60.036 55.0 0.00 0.0 0.00 4.46 F
140 141 0.095417 GCGCAACGAGTCATCTTTCC 59.905 55.0 0.30 0.0 0.00 3.13 F
181 182 0.251341 GACCCTGTTGCCATGGTCTT 60.251 55.0 14.67 0.0 46.86 3.01 F
839 841 0.320374 TCTTCACTGTGTAAGCGGGG 59.680 55.0 7.79 0.0 0.00 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1481 1580 1.211457 GATTGAGTGTGAGGCCCTGAT 59.789 52.381 0.00 0.0 0.00 2.90 R
2080 2180 0.169672 CAGTCCTTCAATGCTTGCCG 59.830 55.000 0.00 0.0 0.00 5.69 R
2166 2266 1.069022 CACATTGACCAAAGCTCACCG 60.069 52.381 0.00 0.0 0.00 4.94 R
2673 3857 3.296322 AATTTGTTGCATACACCGTGG 57.704 42.857 3.03 0.0 36.21 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.753774 CACGACATGTGCCTTGAAC 57.246 52.632 1.15 0.00 42.70 3.18
27 28 0.943673 CACGACATGTGCCTTGAACA 59.056 50.000 1.15 0.00 42.70 3.18
28 29 1.069703 CACGACATGTGCCTTGAACAG 60.070 52.381 1.15 0.00 42.70 3.16
29 30 1.202639 ACGACATGTGCCTTGAACAGA 60.203 47.619 1.15 0.00 0.00 3.41
30 31 1.462283 CGACATGTGCCTTGAACAGAG 59.538 52.381 1.15 0.00 0.00 3.35
31 32 1.808945 GACATGTGCCTTGAACAGAGG 59.191 52.381 1.15 0.00 37.35 3.69
32 33 1.421268 ACATGTGCCTTGAACAGAGGA 59.579 47.619 0.00 0.00 36.33 3.71
33 34 2.040813 ACATGTGCCTTGAACAGAGGAT 59.959 45.455 0.00 0.00 36.33 3.24
34 35 2.189594 TGTGCCTTGAACAGAGGATG 57.810 50.000 0.00 0.00 36.33 3.51
35 36 0.807496 GTGCCTTGAACAGAGGATGC 59.193 55.000 0.00 0.00 36.33 3.91
36 37 0.674581 TGCCTTGAACAGAGGATGCG 60.675 55.000 0.00 0.00 36.33 4.73
37 38 1.372087 GCCTTGAACAGAGGATGCGG 61.372 60.000 0.00 0.00 36.33 5.69
38 39 0.745845 CCTTGAACAGAGGATGCGGG 60.746 60.000 0.00 0.00 36.33 6.13
39 40 0.250234 CTTGAACAGAGGATGCGGGA 59.750 55.000 0.00 0.00 0.00 5.14
40 41 0.036388 TTGAACAGAGGATGCGGGAC 60.036 55.000 0.00 0.00 0.00 4.46
41 42 0.904865 TGAACAGAGGATGCGGGACT 60.905 55.000 0.00 0.00 0.00 3.85
42 43 0.460987 GAACAGAGGATGCGGGACTG 60.461 60.000 0.00 0.00 35.14 3.51
43 44 1.194781 AACAGAGGATGCGGGACTGT 61.195 55.000 0.00 0.00 42.40 3.55
44 45 1.194781 ACAGAGGATGCGGGACTGTT 61.195 55.000 0.00 0.00 38.41 3.16
45 46 0.742281 CAGAGGATGCGGGACTGTTG 60.742 60.000 0.00 0.00 0.00 3.33
46 47 1.450312 GAGGATGCGGGACTGTTGG 60.450 63.158 0.00 0.00 0.00 3.77
47 48 2.185310 GAGGATGCGGGACTGTTGGT 62.185 60.000 0.00 0.00 0.00 3.67
48 49 1.745489 GGATGCGGGACTGTTGGTC 60.745 63.158 0.00 0.00 43.79 4.02
49 50 1.003839 GATGCGGGACTGTTGGTCA 60.004 57.895 0.00 0.00 46.16 4.02
50 51 1.298859 GATGCGGGACTGTTGGTCAC 61.299 60.000 0.00 0.00 46.16 3.67
56 57 1.613437 GGGACTGTTGGTCACATTTGG 59.387 52.381 0.00 0.00 46.94 3.28
57 58 2.306847 GGACTGTTGGTCACATTTGGT 58.693 47.619 0.00 0.00 46.16 3.67
58 59 2.693074 GGACTGTTGGTCACATTTGGTT 59.307 45.455 0.00 0.00 46.16 3.67
59 60 3.132111 GGACTGTTGGTCACATTTGGTTT 59.868 43.478 0.00 0.00 46.16 3.27
60 61 4.382577 GGACTGTTGGTCACATTTGGTTTT 60.383 41.667 0.00 0.00 46.16 2.43
61 62 4.754322 ACTGTTGGTCACATTTGGTTTTC 58.246 39.130 0.00 0.00 33.76 2.29
62 63 3.775202 TGTTGGTCACATTTGGTTTTCG 58.225 40.909 0.00 0.00 0.00 3.46
63 64 3.444034 TGTTGGTCACATTTGGTTTTCGA 59.556 39.130 0.00 0.00 0.00 3.71
64 65 3.701532 TGGTCACATTTGGTTTTCGAC 57.298 42.857 0.00 0.00 0.00 4.20
65 66 3.283751 TGGTCACATTTGGTTTTCGACT 58.716 40.909 0.00 0.00 0.00 4.18
66 67 3.697045 TGGTCACATTTGGTTTTCGACTT 59.303 39.130 0.00 0.00 0.00 3.01
67 68 4.041723 GGTCACATTTGGTTTTCGACTTG 58.958 43.478 0.00 0.00 0.00 3.16
68 69 3.485743 GTCACATTTGGTTTTCGACTTGC 59.514 43.478 0.00 0.00 0.00 4.01
69 70 2.467305 CACATTTGGTTTTCGACTTGCG 59.533 45.455 0.00 0.00 42.69 4.85
70 71 2.098443 ACATTTGGTTTTCGACTTGCGT 59.902 40.909 0.00 0.00 41.80 5.24
71 72 2.181426 TTTGGTTTTCGACTTGCGTG 57.819 45.000 0.00 0.00 41.80 5.34
72 73 1.088306 TTGGTTTTCGACTTGCGTGT 58.912 45.000 0.00 0.00 41.80 4.49
73 74 0.653636 TGGTTTTCGACTTGCGTGTC 59.346 50.000 0.00 0.00 41.80 3.67
74 75 0.935196 GGTTTTCGACTTGCGTGTCT 59.065 50.000 7.20 0.00 41.80 3.41
75 76 2.129607 GGTTTTCGACTTGCGTGTCTA 58.870 47.619 7.20 0.00 41.80 2.59
76 77 2.540931 GGTTTTCGACTTGCGTGTCTAA 59.459 45.455 7.20 0.74 41.80 2.10
77 78 3.001533 GGTTTTCGACTTGCGTGTCTAAA 59.998 43.478 7.20 6.08 41.80 1.85
78 79 4.319261 GGTTTTCGACTTGCGTGTCTAAAT 60.319 41.667 8.58 0.00 41.80 1.40
79 80 5.107375 GGTTTTCGACTTGCGTGTCTAAATA 60.107 40.000 8.58 1.11 41.80 1.40
80 81 6.401796 GGTTTTCGACTTGCGTGTCTAAATAT 60.402 38.462 8.58 0.00 41.80 1.28
81 82 6.715344 TTTCGACTTGCGTGTCTAAATATT 57.285 33.333 7.20 0.00 41.80 1.28
82 83 5.944049 TCGACTTGCGTGTCTAAATATTC 57.056 39.130 7.20 0.00 41.80 1.75
83 84 5.647589 TCGACTTGCGTGTCTAAATATTCT 58.352 37.500 7.20 0.00 41.80 2.40
84 85 5.742453 TCGACTTGCGTGTCTAAATATTCTC 59.258 40.000 7.20 0.00 41.80 2.87
85 86 5.515270 CGACTTGCGTGTCTAAATATTCTCA 59.485 40.000 7.20 0.00 35.00 3.27
86 87 6.506513 CGACTTGCGTGTCTAAATATTCTCAC 60.507 42.308 7.20 0.00 35.00 3.51
87 88 6.163476 ACTTGCGTGTCTAAATATTCTCACA 58.837 36.000 0.00 0.00 0.00 3.58
88 89 6.649141 ACTTGCGTGTCTAAATATTCTCACAA 59.351 34.615 0.00 0.00 0.00 3.33
89 90 7.334421 ACTTGCGTGTCTAAATATTCTCACAAT 59.666 33.333 0.00 0.00 0.00 2.71
90 91 8.710835 TTGCGTGTCTAAATATTCTCACAATA 57.289 30.769 0.00 0.00 0.00 1.90
91 92 8.126871 TGCGTGTCTAAATATTCTCACAATAC 57.873 34.615 0.00 0.00 0.00 1.89
92 93 7.979537 TGCGTGTCTAAATATTCTCACAATACT 59.020 33.333 0.00 0.00 0.00 2.12
93 94 8.818057 GCGTGTCTAAATATTCTCACAATACTT 58.182 33.333 0.00 0.00 0.00 2.24
100 101 8.738645 AAATATTCTCACAATACTTGACTCCC 57.261 34.615 0.00 0.00 0.00 4.30
101 102 7.682787 ATATTCTCACAATACTTGACTCCCT 57.317 36.000 0.00 0.00 0.00 4.20
102 103 5.407407 TTCTCACAATACTTGACTCCCTC 57.593 43.478 0.00 0.00 0.00 4.30
103 104 4.678256 TCTCACAATACTTGACTCCCTCT 58.322 43.478 0.00 0.00 0.00 3.69
104 105 4.707448 TCTCACAATACTTGACTCCCTCTC 59.293 45.833 0.00 0.00 0.00 3.20
105 106 3.444034 TCACAATACTTGACTCCCTCTCG 59.556 47.826 0.00 0.00 0.00 4.04
106 107 2.761208 ACAATACTTGACTCCCTCTCGG 59.239 50.000 0.00 0.00 0.00 4.63
107 108 1.404843 ATACTTGACTCCCTCTCGGC 58.595 55.000 0.00 0.00 0.00 5.54
108 109 0.683504 TACTTGACTCCCTCTCGGCC 60.684 60.000 0.00 0.00 0.00 6.13
109 110 1.684049 CTTGACTCCCTCTCGGCCT 60.684 63.158 0.00 0.00 0.00 5.19
110 111 1.229209 TTGACTCCCTCTCGGCCTT 60.229 57.895 0.00 0.00 0.00 4.35
111 112 0.836400 TTGACTCCCTCTCGGCCTTT 60.836 55.000 0.00 0.00 0.00 3.11
112 113 1.219393 GACTCCCTCTCGGCCTTTG 59.781 63.158 0.00 0.00 0.00 2.77
113 114 2.124942 CTCCCTCTCGGCCTTTGC 60.125 66.667 0.00 0.00 0.00 3.68
114 115 4.082523 TCCCTCTCGGCCTTTGCG 62.083 66.667 0.00 0.00 38.85 4.85
116 117 4.767255 CCTCTCGGCCTTTGCGCT 62.767 66.667 9.73 0.00 38.85 5.92
117 118 2.184322 CTCTCGGCCTTTGCGCTA 59.816 61.111 9.73 0.00 38.85 4.26
118 119 1.227380 CTCTCGGCCTTTGCGCTAT 60.227 57.895 9.73 0.00 38.85 2.97
119 120 0.811616 CTCTCGGCCTTTGCGCTATT 60.812 55.000 9.73 0.00 38.85 1.73
120 121 0.462375 TCTCGGCCTTTGCGCTATTA 59.538 50.000 9.73 0.00 38.85 0.98
121 122 0.861837 CTCGGCCTTTGCGCTATTAG 59.138 55.000 9.73 0.00 38.85 1.73
122 123 1.157870 TCGGCCTTTGCGCTATTAGC 61.158 55.000 9.73 5.56 38.85 3.09
133 134 1.556564 GCTATTAGCGCAACGAGTCA 58.443 50.000 11.47 0.00 0.00 3.41
134 135 2.128035 GCTATTAGCGCAACGAGTCAT 58.872 47.619 11.47 0.00 0.00 3.06
135 136 2.154007 GCTATTAGCGCAACGAGTCATC 59.846 50.000 11.47 0.00 0.00 2.92
136 137 2.586258 ATTAGCGCAACGAGTCATCT 57.414 45.000 11.47 0.00 0.00 2.90
137 138 2.363788 TTAGCGCAACGAGTCATCTT 57.636 45.000 11.47 0.00 0.00 2.40
138 139 2.363788 TAGCGCAACGAGTCATCTTT 57.636 45.000 11.47 0.00 0.00 2.52
139 140 1.071605 AGCGCAACGAGTCATCTTTC 58.928 50.000 11.47 0.00 0.00 2.62
140 141 0.095417 GCGCAACGAGTCATCTTTCC 59.905 55.000 0.30 0.00 0.00 3.13
141 142 1.428448 CGCAACGAGTCATCTTTCCA 58.572 50.000 0.00 0.00 0.00 3.53
142 143 1.126846 CGCAACGAGTCATCTTTCCAC 59.873 52.381 0.00 0.00 0.00 4.02
143 144 2.417719 GCAACGAGTCATCTTTCCACT 58.582 47.619 0.00 0.00 0.00 4.00
144 145 2.413453 GCAACGAGTCATCTTTCCACTC 59.587 50.000 0.00 0.00 34.36 3.51
145 146 3.862642 GCAACGAGTCATCTTTCCACTCT 60.863 47.826 0.00 0.00 35.37 3.24
146 147 4.618460 GCAACGAGTCATCTTTCCACTCTA 60.618 45.833 0.00 0.00 35.37 2.43
147 148 5.470368 CAACGAGTCATCTTTCCACTCTAA 58.530 41.667 0.00 0.00 35.37 2.10
148 149 5.723672 ACGAGTCATCTTTCCACTCTAAA 57.276 39.130 0.00 0.00 35.37 1.85
149 150 6.097915 ACGAGTCATCTTTCCACTCTAAAA 57.902 37.500 0.00 0.00 35.37 1.52
150 151 5.927115 ACGAGTCATCTTTCCACTCTAAAAC 59.073 40.000 0.00 0.00 35.37 2.43
151 152 5.926542 CGAGTCATCTTTCCACTCTAAAACA 59.073 40.000 0.00 0.00 35.37 2.83
152 153 6.423905 CGAGTCATCTTTCCACTCTAAAACAA 59.576 38.462 0.00 0.00 35.37 2.83
153 154 7.042051 CGAGTCATCTTTCCACTCTAAAACAAA 60.042 37.037 0.00 0.00 35.37 2.83
154 155 7.931275 AGTCATCTTTCCACTCTAAAACAAAC 58.069 34.615 0.00 0.00 0.00 2.93
155 156 7.775561 AGTCATCTTTCCACTCTAAAACAAACT 59.224 33.333 0.00 0.00 0.00 2.66
156 157 9.052759 GTCATCTTTCCACTCTAAAACAAACTA 57.947 33.333 0.00 0.00 0.00 2.24
157 158 9.052759 TCATCTTTCCACTCTAAAACAAACTAC 57.947 33.333 0.00 0.00 0.00 2.73
158 159 7.797038 TCTTTCCACTCTAAAACAAACTACC 57.203 36.000 0.00 0.00 0.00 3.18
159 160 7.571025 TCTTTCCACTCTAAAACAAACTACCT 58.429 34.615 0.00 0.00 0.00 3.08
160 161 8.050930 TCTTTCCACTCTAAAACAAACTACCTT 58.949 33.333 0.00 0.00 0.00 3.50
161 162 9.333724 CTTTCCACTCTAAAACAAACTACCTTA 57.666 33.333 0.00 0.00 0.00 2.69
162 163 8.897872 TTCCACTCTAAAACAAACTACCTTAG 57.102 34.615 0.00 0.00 0.00 2.18
163 164 8.253867 TCCACTCTAAAACAAACTACCTTAGA 57.746 34.615 0.00 0.00 0.00 2.10
164 165 8.146412 TCCACTCTAAAACAAACTACCTTAGAC 58.854 37.037 0.00 0.00 0.00 2.59
165 166 7.387122 CCACTCTAAAACAAACTACCTTAGACC 59.613 40.741 0.00 0.00 0.00 3.85
166 167 7.387122 CACTCTAAAACAAACTACCTTAGACCC 59.613 40.741 0.00 0.00 0.00 4.46
167 168 7.291885 ACTCTAAAACAAACTACCTTAGACCCT 59.708 37.037 0.00 0.00 0.00 4.34
168 169 7.447594 TCTAAAACAAACTACCTTAGACCCTG 58.552 38.462 0.00 0.00 0.00 4.45
169 170 5.641789 AAACAAACTACCTTAGACCCTGT 57.358 39.130 0.00 0.00 0.00 4.00
170 171 5.641789 AACAAACTACCTTAGACCCTGTT 57.358 39.130 0.00 0.00 0.00 3.16
171 172 4.969484 ACAAACTACCTTAGACCCTGTTG 58.031 43.478 0.00 0.00 0.00 3.33
172 173 3.697619 AACTACCTTAGACCCTGTTGC 57.302 47.619 0.00 0.00 0.00 4.17
173 174 1.907255 ACTACCTTAGACCCTGTTGCC 59.093 52.381 0.00 0.00 0.00 4.52
174 175 1.906574 CTACCTTAGACCCTGTTGCCA 59.093 52.381 0.00 0.00 0.00 4.92
175 176 1.372501 ACCTTAGACCCTGTTGCCAT 58.627 50.000 0.00 0.00 0.00 4.40
176 177 1.004745 ACCTTAGACCCTGTTGCCATG 59.995 52.381 0.00 0.00 0.00 3.66
177 178 1.683011 CCTTAGACCCTGTTGCCATGG 60.683 57.143 7.63 7.63 32.98 3.66
178 179 1.004745 CTTAGACCCTGTTGCCATGGT 59.995 52.381 14.67 0.00 41.68 3.55
179 180 4.002797 GACCCTGTTGCCATGGTC 57.997 61.111 14.67 6.41 45.30 4.02
180 181 1.380302 GACCCTGTTGCCATGGTCT 59.620 57.895 14.67 0.00 46.86 3.85
181 182 0.251341 GACCCTGTTGCCATGGTCTT 60.251 55.000 14.67 0.00 46.86 3.01
182 183 0.540365 ACCCTGTTGCCATGGTCTTG 60.540 55.000 14.67 0.39 34.88 3.02
183 184 1.588082 CCTGTTGCCATGGTCTTGC 59.412 57.895 14.67 0.00 0.00 4.01
184 185 0.896940 CCTGTTGCCATGGTCTTGCT 60.897 55.000 14.67 0.00 0.00 3.91
185 186 0.524862 CTGTTGCCATGGTCTTGCTC 59.475 55.000 14.67 0.00 0.00 4.26
186 187 0.895100 TGTTGCCATGGTCTTGCTCC 60.895 55.000 14.67 0.00 0.00 4.70
187 188 0.895100 GTTGCCATGGTCTTGCTCCA 60.895 55.000 14.67 0.00 39.41 3.86
188 189 0.895100 TTGCCATGGTCTTGCTCCAC 60.895 55.000 14.67 0.00 37.81 4.02
189 190 1.001641 GCCATGGTCTTGCTCCACT 60.002 57.895 14.67 0.00 37.81 4.00
190 191 1.028868 GCCATGGTCTTGCTCCACTC 61.029 60.000 14.67 0.00 37.81 3.51
191 192 0.617413 CCATGGTCTTGCTCCACTCT 59.383 55.000 2.57 0.00 37.81 3.24
192 193 1.833630 CCATGGTCTTGCTCCACTCTA 59.166 52.381 2.57 0.00 37.81 2.43
193 194 2.237143 CCATGGTCTTGCTCCACTCTAA 59.763 50.000 2.57 0.00 37.81 2.10
194 195 3.307691 CCATGGTCTTGCTCCACTCTAAA 60.308 47.826 2.57 0.00 37.81 1.85
195 196 4.326826 CATGGTCTTGCTCCACTCTAAAA 58.673 43.478 0.00 0.00 37.81 1.52
196 197 3.740115 TGGTCTTGCTCCACTCTAAAAC 58.260 45.455 0.00 0.00 0.00 2.43
197 198 3.135712 TGGTCTTGCTCCACTCTAAAACA 59.864 43.478 0.00 0.00 0.00 2.83
198 199 4.134563 GGTCTTGCTCCACTCTAAAACAA 58.865 43.478 0.00 0.00 0.00 2.83
207 208 4.338118 TCCACTCTAAAACAAACTGCCTTG 59.662 41.667 0.00 0.00 0.00 3.61
258 259 7.068839 TCCACTCTAAAACAAACTATTTTGGCA 59.931 33.333 9.99 0.00 45.65 4.92
384 385 3.273434 CGATGGGCTTTCTGATGAAGAA 58.727 45.455 0.00 0.00 43.37 2.52
398 399 7.555965 TCTGATGAAGAAACCGATGAAGATTA 58.444 34.615 0.00 0.00 29.54 1.75
460 461 1.134280 CCCCATGAGCACTGTCTAAGG 60.134 57.143 0.00 0.00 0.00 2.69
464 465 0.898320 TGAGCACTGTCTAAGGCCTC 59.102 55.000 5.23 0.00 0.00 4.70
522 524 3.866883 TCGTGATGACAATGCTCACTA 57.133 42.857 5.60 0.00 37.68 2.74
563 565 6.049149 GTGTCATATTGAGCCTGCTAAACTA 58.951 40.000 0.00 0.00 0.00 2.24
578 580 5.586243 TGCTAAACTATCTCTTTGCCATGTC 59.414 40.000 0.00 0.00 0.00 3.06
610 612 1.138266 GTATGGCTTCACCGCTAGGAA 59.862 52.381 0.00 0.00 43.94 3.36
695 697 5.128919 ACTCATAGCTTTGGCCTAGAAATG 58.871 41.667 3.32 8.79 39.73 2.32
758 760 5.113383 TGAAGTCTGTGTTGACGTGTTAAT 58.887 37.500 0.00 0.00 41.47 1.40
825 827 9.212641 CTGTGATTCTTCTTTTCAGTATCTTCA 57.787 33.333 0.00 0.00 0.00 3.02
828 830 9.212641 TGATTCTTCTTTTCAGTATCTTCACTG 57.787 33.333 0.00 0.00 46.04 3.66
830 832 7.953158 TCTTCTTTTCAGTATCTTCACTGTG 57.047 36.000 0.17 0.17 45.11 3.66
831 833 7.500992 TCTTCTTTTCAGTATCTTCACTGTGT 58.499 34.615 7.79 0.00 45.11 3.72
833 835 9.261180 CTTCTTTTCAGTATCTTCACTGTGTAA 57.739 33.333 7.79 0.60 45.11 2.41
834 836 8.818141 TCTTTTCAGTATCTTCACTGTGTAAG 57.182 34.615 7.79 10.01 45.11 2.34
835 837 7.385205 TCTTTTCAGTATCTTCACTGTGTAAGC 59.615 37.037 7.79 0.00 45.11 3.09
836 838 4.733850 TCAGTATCTTCACTGTGTAAGCG 58.266 43.478 7.79 0.00 45.11 4.68
837 839 3.859961 CAGTATCTTCACTGTGTAAGCGG 59.140 47.826 7.79 0.00 40.89 5.52
838 840 2.386661 ATCTTCACTGTGTAAGCGGG 57.613 50.000 7.79 0.00 0.00 6.13
839 841 0.320374 TCTTCACTGTGTAAGCGGGG 59.680 55.000 7.79 0.00 0.00 5.73
840 842 0.320374 CTTCACTGTGTAAGCGGGGA 59.680 55.000 7.79 0.00 0.00 4.81
841 843 0.759959 TTCACTGTGTAAGCGGGGAA 59.240 50.000 7.79 0.00 35.03 3.97
842 844 0.320374 TCACTGTGTAAGCGGGGAAG 59.680 55.000 7.79 0.00 0.00 3.46
843 845 1.003718 ACTGTGTAAGCGGGGAAGC 60.004 57.895 0.00 0.00 37.41 3.86
844 846 1.003839 CTGTGTAAGCGGGGAAGCA 60.004 57.895 0.00 0.00 40.15 3.91
845 847 1.003839 TGTGTAAGCGGGGAAGCAG 60.004 57.895 0.00 0.00 40.15 4.24
846 848 2.046314 TGTAAGCGGGGAAGCAGC 60.046 61.111 0.00 0.00 40.15 5.25
847 849 2.046314 GTAAGCGGGGAAGCAGCA 60.046 61.111 0.00 0.00 40.15 4.41
848 850 1.674322 GTAAGCGGGGAAGCAGCAA 60.674 57.895 0.00 0.00 40.15 3.91
849 851 1.032114 GTAAGCGGGGAAGCAGCAAT 61.032 55.000 0.00 0.00 40.15 3.56
850 852 1.031571 TAAGCGGGGAAGCAGCAATG 61.032 55.000 0.00 0.00 40.15 2.82
851 853 3.830192 GCGGGGAAGCAGCAATGG 61.830 66.667 0.00 0.00 37.05 3.16
852 854 2.045045 CGGGGAAGCAGCAATGGA 60.045 61.111 0.00 0.00 0.00 3.41
853 855 2.409870 CGGGGAAGCAGCAATGGAC 61.410 63.158 0.00 0.00 0.00 4.02
854 856 2.054453 GGGGAAGCAGCAATGGACC 61.054 63.158 0.00 0.00 0.00 4.46
855 857 1.304381 GGGAAGCAGCAATGGACCA 60.304 57.895 0.00 0.00 0.00 4.02
856 858 0.685458 GGGAAGCAGCAATGGACCAT 60.685 55.000 0.00 0.00 0.00 3.55
857 859 1.410083 GGGAAGCAGCAATGGACCATA 60.410 52.381 7.59 0.00 0.00 2.74
858 860 1.678101 GGAAGCAGCAATGGACCATAC 59.322 52.381 7.59 3.23 0.00 2.39
859 861 2.368439 GAAGCAGCAATGGACCATACA 58.632 47.619 7.59 0.00 0.00 2.29
862 864 2.020694 GCAGCAATGGACCATACAGCT 61.021 52.381 18.31 18.31 30.65 4.24
867 869 0.465705 ATGGACCATACAGCTGACCG 59.534 55.000 23.35 7.39 0.00 4.79
898 900 3.117512 ACCAACAATCCATCCATCCCTAC 60.118 47.826 0.00 0.00 0.00 3.18
899 901 3.117550 CCAACAATCCATCCATCCCTACA 60.118 47.826 0.00 0.00 0.00 2.74
900 902 4.535781 CAACAATCCATCCATCCCTACAA 58.464 43.478 0.00 0.00 0.00 2.41
901 903 4.879295 ACAATCCATCCATCCCTACAAA 57.121 40.909 0.00 0.00 0.00 2.83
920 928 6.224420 ACAAAAGAAAGAGGTAATTCGTCG 57.776 37.500 0.00 0.00 36.24 5.12
930 938 5.761726 AGAGGTAATTCGTCGTTTCCTTTTT 59.238 36.000 0.00 0.00 36.24 1.94
1030 1125 1.271325 TGGACATTGGCATCGTCTGTT 60.271 47.619 14.25 0.00 0.00 3.16
1167 1262 1.308998 CTCCATCGCCGGCTTATTTT 58.691 50.000 26.68 0.00 0.00 1.82
1286 1381 5.241506 TCCTGATTGTTTTGAATGAGGTGAC 59.758 40.000 0.00 0.00 37.80 3.67
1343 1438 3.421919 TCCTCATGTGTTGCATTCTGA 57.578 42.857 0.00 0.00 35.19 3.27
1536 1635 5.569227 GCCCAATTGAAATCCTCATTTGTCA 60.569 40.000 7.12 0.00 41.06 3.58
1542 1641 8.997621 ATTGAAATCCTCATTTGTCAATTCAG 57.002 30.769 0.00 0.00 31.94 3.02
1641 1740 1.202806 CCCACATATTCGCCCTGATGT 60.203 52.381 0.00 0.00 32.78 3.06
2080 2180 1.132453 GGGAGTTATGAAAACAGCGCC 59.868 52.381 2.29 0.00 0.00 6.53
2166 2266 4.454504 TCGAAGCAACCAGAAATAGTTTCC 59.545 41.667 0.00 0.00 40.54 3.13
2209 2372 2.606308 CCTGAACAACATGCTTCTGTGC 60.606 50.000 0.00 0.00 0.00 4.57
2294 2457 5.420725 ACTCCAAGCAAGATATGTGTACA 57.579 39.130 0.00 0.00 0.00 2.90
2406 2569 2.059541 GCGGGTTATCATCGCTTACTC 58.940 52.381 0.00 0.00 45.16 2.59
2424 2587 7.577807 CGCTTACTCTATATATGTGAAGGCCTT 60.578 40.741 20.65 20.65 0.00 4.35
2547 3232 4.083271 AGCAGTTTTTCACCGCTTATTCTC 60.083 41.667 0.00 0.00 0.00 2.87
2663 3847 6.753913 TCATTAGAGCTTCCCTGTGATAAT 57.246 37.500 0.00 0.00 0.00 1.28
2673 3857 3.132289 TCCCTGTGATAATGTCTTCCGAC 59.868 47.826 0.00 0.00 40.64 4.79
2933 4117 6.874134 GCAACGGGTCATCTAGTTATCATAAT 59.126 38.462 0.00 0.00 0.00 1.28
2934 4118 8.033038 GCAACGGGTCATCTAGTTATCATAATA 58.967 37.037 0.00 0.00 0.00 0.98
2935 4119 9.574458 CAACGGGTCATCTAGTTATCATAATAG 57.426 37.037 0.00 0.00 0.00 1.73
2936 4120 8.880991 ACGGGTCATCTAGTTATCATAATAGT 57.119 34.615 0.00 0.00 0.00 2.12
2937 4121 9.970553 ACGGGTCATCTAGTTATCATAATAGTA 57.029 33.333 0.00 0.00 0.00 1.82
2957 4141 9.742144 AATAGTAGTAGGATCAATAGACGTCAT 57.258 33.333 19.50 6.50 0.00 3.06
2958 4142 9.742144 ATAGTAGTAGGATCAATAGACGTCATT 57.258 33.333 19.50 12.26 0.00 2.57
2959 4143 8.466617 AGTAGTAGGATCAATAGACGTCATTT 57.533 34.615 19.50 7.77 0.00 2.32
2960 4144 8.915036 AGTAGTAGGATCAATAGACGTCATTTT 58.085 33.333 19.50 5.08 0.00 1.82
2961 4145 9.530633 GTAGTAGGATCAATAGACGTCATTTTT 57.469 33.333 19.50 2.44 0.00 1.94
2980 4164 3.319137 TTTCTCACTGTCTTCATCGGG 57.681 47.619 0.00 0.00 0.00 5.14
2981 4165 2.215942 TCTCACTGTCTTCATCGGGA 57.784 50.000 0.00 0.00 0.00 5.14
2982 4166 2.095461 TCTCACTGTCTTCATCGGGAG 58.905 52.381 0.00 0.00 0.00 4.30
2983 4167 0.532573 TCACTGTCTTCATCGGGAGC 59.467 55.000 0.00 0.00 0.00 4.70
2984 4168 0.247460 CACTGTCTTCATCGGGAGCA 59.753 55.000 0.00 0.00 0.00 4.26
2985 4169 1.134580 CACTGTCTTCATCGGGAGCAT 60.135 52.381 0.00 0.00 0.00 3.79
2986 4170 1.137872 ACTGTCTTCATCGGGAGCATC 59.862 52.381 0.00 0.00 0.00 3.91
2987 4171 1.137675 CTGTCTTCATCGGGAGCATCA 59.862 52.381 0.00 0.00 36.25 3.07
2988 4172 1.554617 TGTCTTCATCGGGAGCATCAA 59.445 47.619 0.00 0.00 36.25 2.57
2989 4173 2.208431 GTCTTCATCGGGAGCATCAAG 58.792 52.381 0.00 0.00 36.25 3.02
2990 4174 0.942962 CTTCATCGGGAGCATCAAGC 59.057 55.000 0.00 0.00 46.19 4.01
2998 4182 1.615384 GGGAGCATCAAGCCATATCCC 60.615 57.143 0.00 0.00 44.04 3.85
2999 4183 4.863180 GGGAGCATCAAGCCATATCCCC 62.863 59.091 0.00 0.00 44.38 4.81
3000 4184 2.559785 GCATCAAGCCATATCCCCG 58.440 57.895 0.00 0.00 37.23 5.73
3001 4185 1.589716 GCATCAAGCCATATCCCCGC 61.590 60.000 0.00 0.00 37.23 6.13
3002 4186 0.250858 CATCAAGCCATATCCCCGCA 60.251 55.000 0.00 0.00 0.00 5.69
3003 4187 0.478072 ATCAAGCCATATCCCCGCAA 59.522 50.000 0.00 0.00 0.00 4.85
3004 4188 0.179020 TCAAGCCATATCCCCGCAAG 60.179 55.000 0.00 0.00 0.00 4.01
3017 4201 1.503542 CGCAAGGTGCTCAACATCC 59.496 57.895 0.00 0.00 42.25 3.51
3018 4202 1.236616 CGCAAGGTGCTCAACATCCA 61.237 55.000 0.00 0.00 42.25 3.41
3019 4203 0.242017 GCAAGGTGCTCAACATCCAC 59.758 55.000 0.00 0.00 40.96 4.02
3021 4205 4.819783 GGTGCTCAACATCCACCA 57.180 55.556 4.29 0.00 46.38 4.17
3022 4206 2.257353 GGTGCTCAACATCCACCAC 58.743 57.895 4.29 0.00 46.38 4.16
3023 4207 1.577328 GGTGCTCAACATCCACCACG 61.577 60.000 4.29 0.00 46.38 4.94
3024 4208 0.884704 GTGCTCAACATCCACCACGT 60.885 55.000 0.00 0.00 0.00 4.49
3025 4209 0.179032 TGCTCAACATCCACCACGTT 60.179 50.000 0.00 0.00 0.00 3.99
3026 4210 0.951558 GCTCAACATCCACCACGTTT 59.048 50.000 0.00 0.00 0.00 3.60
3027 4211 2.147958 GCTCAACATCCACCACGTTTA 58.852 47.619 0.00 0.00 0.00 2.01
3028 4212 2.747446 GCTCAACATCCACCACGTTTAT 59.253 45.455 0.00 0.00 0.00 1.40
3029 4213 3.190535 GCTCAACATCCACCACGTTTATT 59.809 43.478 0.00 0.00 0.00 1.40
3030 4214 4.320935 GCTCAACATCCACCACGTTTATTT 60.321 41.667 0.00 0.00 0.00 1.40
3031 4215 5.768317 CTCAACATCCACCACGTTTATTTT 58.232 37.500 0.00 0.00 0.00 1.82
3032 4216 5.764131 TCAACATCCACCACGTTTATTTTC 58.236 37.500 0.00 0.00 0.00 2.29
3033 4217 4.413495 ACATCCACCACGTTTATTTTCG 57.587 40.909 0.00 0.00 0.00 3.46
3034 4218 2.973419 TCCACCACGTTTATTTTCGC 57.027 45.000 0.00 0.00 0.00 4.70
3035 4219 2.219458 TCCACCACGTTTATTTTCGCA 58.781 42.857 0.00 0.00 0.00 5.10
3036 4220 2.224549 TCCACCACGTTTATTTTCGCAG 59.775 45.455 0.00 0.00 0.00 5.18
3037 4221 2.224549 CCACCACGTTTATTTTCGCAGA 59.775 45.455 0.00 0.00 0.00 4.26
3038 4222 3.304123 CCACCACGTTTATTTTCGCAGAA 60.304 43.478 0.00 0.00 45.90 3.02
3039 4223 3.906008 CACCACGTTTATTTTCGCAGAAG 59.094 43.478 0.00 0.00 45.90 2.85
3040 4224 2.908626 CCACGTTTATTTTCGCAGAAGC 59.091 45.455 0.00 0.00 45.90 3.86
3041 4225 3.364964 CCACGTTTATTTTCGCAGAAGCT 60.365 43.478 0.00 0.00 45.90 3.74
3042 4226 3.599514 CACGTTTATTTTCGCAGAAGCTG 59.400 43.478 0.00 0.00 45.90 4.24
3043 4227 3.250040 ACGTTTATTTTCGCAGAAGCTGT 59.750 39.130 0.00 0.00 45.90 4.40
3044 4228 3.599514 CGTTTATTTTCGCAGAAGCTGTG 59.400 43.478 1.73 1.73 45.90 3.66
3045 4229 4.537015 GTTTATTTTCGCAGAAGCTGTGT 58.463 39.130 7.73 0.00 45.90 3.72
3046 4230 5.613795 CGTTTATTTTCGCAGAAGCTGTGTA 60.614 40.000 7.73 0.00 45.90 2.90
3047 4231 3.813529 ATTTTCGCAGAAGCTGTGTAC 57.186 42.857 7.73 0.00 45.90 2.90
3048 4232 2.232756 TTTCGCAGAAGCTGTGTACA 57.767 45.000 7.73 0.00 45.90 2.90
3049 4233 1.497991 TTCGCAGAAGCTGTGTACAC 58.502 50.000 19.36 19.36 45.90 2.90
3050 4234 0.663269 TCGCAGAAGCTGTGTACACG 60.663 55.000 20.61 15.73 41.99 4.49
3051 4235 0.939577 CGCAGAAGCTGTGTACACGT 60.940 55.000 20.61 5.55 37.23 4.49
3052 4236 1.664874 CGCAGAAGCTGTGTACACGTA 60.665 52.381 20.61 3.69 37.23 3.57
3053 4237 2.607187 GCAGAAGCTGTGTACACGTAT 58.393 47.619 20.61 7.26 37.91 3.06
3054 4238 2.599082 GCAGAAGCTGTGTACACGTATC 59.401 50.000 20.61 15.10 37.91 2.24
3055 4239 3.673594 GCAGAAGCTGTGTACACGTATCT 60.674 47.826 20.61 16.86 37.91 1.98
3056 4240 4.486090 CAGAAGCTGTGTACACGTATCTT 58.514 43.478 20.61 18.14 0.00 2.40
3057 4241 4.923871 CAGAAGCTGTGTACACGTATCTTT 59.076 41.667 20.61 9.12 0.00 2.52
3058 4242 4.923871 AGAAGCTGTGTACACGTATCTTTG 59.076 41.667 20.61 4.98 0.00 2.77
3059 4243 4.252971 AGCTGTGTACACGTATCTTTGT 57.747 40.909 20.61 0.00 0.00 2.83
3060 4244 3.987868 AGCTGTGTACACGTATCTTTGTG 59.012 43.478 20.61 2.70 41.81 3.33
3061 4245 3.423123 GCTGTGTACACGTATCTTTGTGC 60.423 47.826 20.61 8.12 39.71 4.57
3062 4246 2.727278 TGTGTACACGTATCTTTGTGCG 59.273 45.455 20.61 0.00 39.71 5.34
3063 4247 2.091588 GTGTACACGTATCTTTGTGCGG 59.908 50.000 10.84 0.00 39.71 5.69
3064 4248 2.030096 TGTACACGTATCTTTGTGCGGA 60.030 45.455 0.00 0.00 39.71 5.54
3065 4249 2.157834 ACACGTATCTTTGTGCGGAA 57.842 45.000 0.00 0.00 39.71 4.30
3066 4250 2.066262 ACACGTATCTTTGTGCGGAAG 58.934 47.619 0.00 0.00 39.71 3.46
3067 4251 1.393539 CACGTATCTTTGTGCGGAAGG 59.606 52.381 0.00 0.00 0.00 3.46
3068 4252 1.274167 ACGTATCTTTGTGCGGAAGGA 59.726 47.619 0.00 0.00 0.00 3.36
3078 4262 3.181367 CGGAAGGACTGCATGCAC 58.819 61.111 18.46 8.17 0.00 4.57
3079 4263 2.401766 CGGAAGGACTGCATGCACC 61.402 63.158 18.46 17.89 0.00 5.01
3080 4264 2.401766 GGAAGGACTGCATGCACCG 61.402 63.158 18.46 11.15 0.00 4.94
3081 4265 1.672356 GAAGGACTGCATGCACCGT 60.672 57.895 18.46 15.96 0.00 4.83
3082 4266 1.639298 GAAGGACTGCATGCACCGTC 61.639 60.000 24.63 24.63 0.00 4.79
3083 4267 2.358615 GGACTGCATGCACCGTCA 60.359 61.111 30.12 7.55 0.00 4.35
3084 4268 1.746615 GGACTGCATGCACCGTCAT 60.747 57.895 30.12 10.01 0.00 3.06
3085 4269 1.426621 GACTGCATGCACCGTCATG 59.573 57.895 26.60 15.13 44.93 3.07
3103 4287 4.598257 CGGTCACGCCTCAGATTT 57.402 55.556 0.00 0.00 34.25 2.17
3104 4288 2.373938 CGGTCACGCCTCAGATTTC 58.626 57.895 0.00 0.00 34.25 2.17
3105 4289 1.084370 CGGTCACGCCTCAGATTTCC 61.084 60.000 0.00 0.00 34.25 3.13
3106 4290 0.250513 GGTCACGCCTCAGATTTCCT 59.749 55.000 0.00 0.00 0.00 3.36
3107 4291 1.646189 GTCACGCCTCAGATTTCCTC 58.354 55.000 0.00 0.00 0.00 3.71
3108 4292 0.173481 TCACGCCTCAGATTTCCTCG 59.827 55.000 0.00 0.00 0.00 4.63
3109 4293 1.153549 ACGCCTCAGATTTCCTCGC 60.154 57.895 0.00 0.00 0.00 5.03
3110 4294 1.884926 CGCCTCAGATTTCCTCGCC 60.885 63.158 0.00 0.00 0.00 5.54
3111 4295 1.524849 GCCTCAGATTTCCTCGCCC 60.525 63.158 0.00 0.00 0.00 6.13
3112 4296 1.977293 GCCTCAGATTTCCTCGCCCT 61.977 60.000 0.00 0.00 0.00 5.19
3113 4297 0.543749 CCTCAGATTTCCTCGCCCTT 59.456 55.000 0.00 0.00 0.00 3.95
3114 4298 1.474143 CCTCAGATTTCCTCGCCCTTC 60.474 57.143 0.00 0.00 0.00 3.46
3115 4299 0.175760 TCAGATTTCCTCGCCCTTCG 59.824 55.000 0.00 0.00 40.15 3.79
3116 4300 1.153349 AGATTTCCTCGCCCTTCGC 60.153 57.895 0.00 0.00 38.27 4.70
3117 4301 1.449601 GATTTCCTCGCCCTTCGCA 60.450 57.895 0.00 0.00 37.30 5.10
3118 4302 1.002624 ATTTCCTCGCCCTTCGCAA 60.003 52.632 0.00 0.00 37.30 4.85
3119 4303 1.026718 ATTTCCTCGCCCTTCGCAAG 61.027 55.000 0.00 0.00 37.30 4.01
3120 4304 2.391724 TTTCCTCGCCCTTCGCAAGT 62.392 55.000 0.00 0.00 37.30 3.16
3121 4305 1.537814 TTCCTCGCCCTTCGCAAGTA 61.538 55.000 0.00 0.00 37.30 2.24
3122 4306 1.144057 CCTCGCCCTTCGCAAGTAT 59.856 57.895 0.00 0.00 37.30 2.12
3123 4307 0.876342 CCTCGCCCTTCGCAAGTATC 60.876 60.000 0.00 0.00 37.30 2.24
3124 4308 0.103208 CTCGCCCTTCGCAAGTATCT 59.897 55.000 0.00 0.00 37.30 1.98
3125 4309 0.102481 TCGCCCTTCGCAAGTATCTC 59.898 55.000 0.00 0.00 37.30 2.75
3126 4310 1.209275 CGCCCTTCGCAAGTATCTCG 61.209 60.000 0.00 0.00 37.30 4.04
3127 4311 0.102481 GCCCTTCGCAAGTATCTCGA 59.898 55.000 0.00 0.00 37.47 4.04
3128 4312 1.269831 GCCCTTCGCAAGTATCTCGAT 60.270 52.381 0.00 0.00 37.47 3.59
3129 4313 2.667137 CCCTTCGCAAGTATCTCGATC 58.333 52.381 0.00 0.00 39.48 3.69
3130 4314 2.034685 CCCTTCGCAAGTATCTCGATCA 59.965 50.000 0.00 0.00 39.48 2.92
3131 4315 3.490933 CCCTTCGCAAGTATCTCGATCAA 60.491 47.826 0.00 0.00 39.48 2.57
3132 4316 3.487574 CCTTCGCAAGTATCTCGATCAAC 59.512 47.826 0.00 0.00 39.48 3.18
3133 4317 4.355437 CTTCGCAAGTATCTCGATCAACT 58.645 43.478 0.00 0.00 39.48 3.16
3134 4318 3.695816 TCGCAAGTATCTCGATCAACTG 58.304 45.455 0.00 0.00 39.48 3.16
3135 4319 2.791560 CGCAAGTATCTCGATCAACTGG 59.208 50.000 0.00 0.00 0.00 4.00
3136 4320 3.735208 CGCAAGTATCTCGATCAACTGGT 60.735 47.826 0.00 0.00 0.00 4.00
3137 4321 3.553511 GCAAGTATCTCGATCAACTGGTG 59.446 47.826 0.00 0.00 0.00 4.17
3138 4322 3.444703 AGTATCTCGATCAACTGGTGC 57.555 47.619 0.00 0.00 0.00 5.01
3139 4323 2.760650 AGTATCTCGATCAACTGGTGCA 59.239 45.455 0.00 0.00 0.00 4.57
3140 4324 2.015736 ATCTCGATCAACTGGTGCAC 57.984 50.000 8.80 8.80 0.00 4.57
3141 4325 0.388520 TCTCGATCAACTGGTGCACG 60.389 55.000 11.45 0.00 0.00 5.34
3142 4326 0.388520 CTCGATCAACTGGTGCACGA 60.389 55.000 11.45 5.97 34.89 4.35
3143 4327 0.388520 TCGATCAACTGGTGCACGAG 60.389 55.000 25.26 25.26 33.25 4.18
3144 4328 0.388520 CGATCAACTGGTGCACGAGA 60.389 55.000 32.20 13.28 0.00 4.04
3145 4329 1.071605 GATCAACTGGTGCACGAGAC 58.928 55.000 32.20 9.82 0.00 3.36
3146 4330 0.392706 ATCAACTGGTGCACGAGACA 59.607 50.000 32.20 16.56 0.00 3.41
3147 4331 0.529773 TCAACTGGTGCACGAGACAC 60.530 55.000 32.20 8.68 37.31 3.67
3157 4341 2.875485 CGAGACACGGACCGTCAT 59.125 61.111 18.72 8.49 38.32 3.06
3158 4342 1.514228 CGAGACACGGACCGTCATG 60.514 63.158 18.72 9.16 38.32 3.07
3159 4343 1.805945 GAGACACGGACCGTCATGC 60.806 63.158 18.72 6.70 38.32 4.06
3160 4344 2.214181 GAGACACGGACCGTCATGCT 62.214 60.000 18.72 11.67 38.32 3.79
3161 4345 1.805945 GACACGGACCGTCATGCTC 60.806 63.158 18.72 3.09 38.32 4.26
3162 4346 2.261361 CACGGACCGTCATGCTCA 59.739 61.111 18.72 0.00 38.32 4.26
3163 4347 1.153568 CACGGACCGTCATGCTCAT 60.154 57.895 18.72 0.00 38.32 2.90
3164 4348 0.102300 CACGGACCGTCATGCTCATA 59.898 55.000 18.72 0.00 38.32 2.15
3165 4349 0.102481 ACGGACCGTCATGCTCATAC 59.898 55.000 15.37 0.00 33.69 2.39
3166 4350 0.597637 CGGACCGTCATGCTCATACC 60.598 60.000 5.48 0.00 0.00 2.73
3167 4351 0.753262 GGACCGTCATGCTCATACCT 59.247 55.000 0.00 0.00 0.00 3.08
3168 4352 1.269831 GGACCGTCATGCTCATACCTC 60.270 57.143 0.00 0.00 0.00 3.85
3169 4353 1.409064 GACCGTCATGCTCATACCTCA 59.591 52.381 0.00 0.00 0.00 3.86
3170 4354 1.410517 ACCGTCATGCTCATACCTCAG 59.589 52.381 0.00 0.00 0.00 3.35
3171 4355 1.683385 CCGTCATGCTCATACCTCAGA 59.317 52.381 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.918571 CACATGTCGTGTTCCTGCT 58.081 52.632 0.00 0.00 39.62 4.24
9 10 1.202639 TCTGTTCAAGGCACATGTCGT 60.203 47.619 0.00 0.00 0.00 4.34
10 11 1.462283 CTCTGTTCAAGGCACATGTCG 59.538 52.381 0.00 0.00 0.00 4.35
11 12 1.808945 CCTCTGTTCAAGGCACATGTC 59.191 52.381 0.00 0.00 0.00 3.06
12 13 1.421268 TCCTCTGTTCAAGGCACATGT 59.579 47.619 0.00 0.00 33.65 3.21
13 14 2.189594 TCCTCTGTTCAAGGCACATG 57.810 50.000 0.00 0.00 33.65 3.21
14 15 2.719739 CATCCTCTGTTCAAGGCACAT 58.280 47.619 0.00 0.00 33.65 3.21
15 16 1.883638 GCATCCTCTGTTCAAGGCACA 60.884 52.381 0.00 0.00 33.65 4.57
16 17 0.807496 GCATCCTCTGTTCAAGGCAC 59.193 55.000 0.00 0.00 33.65 5.01
17 18 0.674581 CGCATCCTCTGTTCAAGGCA 60.675 55.000 0.00 0.00 33.65 4.75
18 19 1.372087 CCGCATCCTCTGTTCAAGGC 61.372 60.000 0.00 0.00 33.65 4.35
19 20 0.745845 CCCGCATCCTCTGTTCAAGG 60.746 60.000 0.00 0.00 35.05 3.61
20 21 0.250234 TCCCGCATCCTCTGTTCAAG 59.750 55.000 0.00 0.00 0.00 3.02
21 22 0.036388 GTCCCGCATCCTCTGTTCAA 60.036 55.000 0.00 0.00 0.00 2.69
22 23 0.904865 AGTCCCGCATCCTCTGTTCA 60.905 55.000 0.00 0.00 0.00 3.18
23 24 0.460987 CAGTCCCGCATCCTCTGTTC 60.461 60.000 0.00 0.00 0.00 3.18
24 25 1.194781 ACAGTCCCGCATCCTCTGTT 61.195 55.000 0.00 0.00 36.17 3.16
25 26 1.194781 AACAGTCCCGCATCCTCTGT 61.195 55.000 0.00 0.00 40.40 3.41
26 27 0.742281 CAACAGTCCCGCATCCTCTG 60.742 60.000 0.00 0.00 0.00 3.35
27 28 1.599047 CAACAGTCCCGCATCCTCT 59.401 57.895 0.00 0.00 0.00 3.69
28 29 1.450312 CCAACAGTCCCGCATCCTC 60.450 63.158 0.00 0.00 0.00 3.71
29 30 2.185310 GACCAACAGTCCCGCATCCT 62.185 60.000 0.00 0.00 39.84 3.24
30 31 1.745489 GACCAACAGTCCCGCATCC 60.745 63.158 0.00 0.00 39.84 3.51
31 32 1.003839 TGACCAACAGTCCCGCATC 60.004 57.895 0.00 0.00 45.68 3.91
32 33 1.302511 GTGACCAACAGTCCCGCAT 60.303 57.895 0.00 0.00 45.68 4.73
33 34 2.050836 ATGTGACCAACAGTCCCGCA 62.051 55.000 0.00 0.00 45.68 5.69
34 35 0.889186 AATGTGACCAACAGTCCCGC 60.889 55.000 0.00 0.00 45.68 6.13
35 36 1.266718 CAAATGTGACCAACAGTCCCG 59.733 52.381 0.00 0.00 45.68 5.14
36 37 1.613437 CCAAATGTGACCAACAGTCCC 59.387 52.381 0.00 0.00 45.68 4.46
37 38 2.306847 ACCAAATGTGACCAACAGTCC 58.693 47.619 0.00 0.00 45.68 3.85
38 39 4.385358 AAACCAAATGTGACCAACAGTC 57.615 40.909 0.00 0.00 43.64 3.51
39 40 4.676723 CGAAAACCAAATGTGACCAACAGT 60.677 41.667 0.00 0.00 43.64 3.55
40 41 3.796178 CGAAAACCAAATGTGACCAACAG 59.204 43.478 0.00 0.00 43.64 3.16
41 42 3.444034 TCGAAAACCAAATGTGACCAACA 59.556 39.130 0.00 0.00 44.79 3.33
42 43 3.794564 GTCGAAAACCAAATGTGACCAAC 59.205 43.478 0.00 0.00 0.00 3.77
43 44 3.697045 AGTCGAAAACCAAATGTGACCAA 59.303 39.130 0.00 0.00 0.00 3.67
44 45 3.283751 AGTCGAAAACCAAATGTGACCA 58.716 40.909 0.00 0.00 0.00 4.02
45 46 3.982576 AGTCGAAAACCAAATGTGACC 57.017 42.857 0.00 0.00 0.00 4.02
46 47 3.485743 GCAAGTCGAAAACCAAATGTGAC 59.514 43.478 0.00 0.00 0.00 3.67
47 48 3.701241 GCAAGTCGAAAACCAAATGTGA 58.299 40.909 0.00 0.00 0.00 3.58
48 49 2.467305 CGCAAGTCGAAAACCAAATGTG 59.533 45.455 0.00 0.00 41.67 3.21
49 50 2.726633 CGCAAGTCGAAAACCAAATGT 58.273 42.857 0.00 0.00 41.67 2.71
65 66 7.609760 ATTGTGAGAATATTTAGACACGCAA 57.390 32.000 0.00 0.00 0.00 4.85
66 67 7.979537 AGTATTGTGAGAATATTTAGACACGCA 59.020 33.333 0.00 0.00 0.00 5.24
67 68 8.354011 AGTATTGTGAGAATATTTAGACACGC 57.646 34.615 0.00 0.00 0.00 5.34
100 101 0.811616 AATAGCGCAAAGGCCGAGAG 60.812 55.000 11.47 0.00 36.38 3.20
101 102 0.462375 TAATAGCGCAAAGGCCGAGA 59.538 50.000 11.47 0.00 36.38 4.04
102 103 0.861837 CTAATAGCGCAAAGGCCGAG 59.138 55.000 11.47 0.00 36.38 4.63
103 104 1.157870 GCTAATAGCGCAAAGGCCGA 61.158 55.000 11.47 0.00 36.38 5.54
104 105 1.279840 GCTAATAGCGCAAAGGCCG 59.720 57.895 11.47 0.00 36.38 6.13
114 115 1.556564 TGACTCGTTGCGCTAATAGC 58.443 50.000 9.73 1.41 38.02 2.97
115 116 3.633235 AGATGACTCGTTGCGCTAATAG 58.367 45.455 9.73 4.49 0.00 1.73
116 117 3.710326 AGATGACTCGTTGCGCTAATA 57.290 42.857 9.73 0.00 0.00 0.98
117 118 2.586258 AGATGACTCGTTGCGCTAAT 57.414 45.000 9.73 0.00 0.00 1.73
118 119 2.363788 AAGATGACTCGTTGCGCTAA 57.636 45.000 9.73 0.00 0.00 3.09
119 120 2.259618 GAAAGATGACTCGTTGCGCTA 58.740 47.619 9.73 0.00 0.00 4.26
120 121 1.071605 GAAAGATGACTCGTTGCGCT 58.928 50.000 9.73 0.00 0.00 5.92
121 122 0.095417 GGAAAGATGACTCGTTGCGC 59.905 55.000 0.00 0.00 0.00 6.09
122 123 1.126846 GTGGAAAGATGACTCGTTGCG 59.873 52.381 0.00 0.00 34.72 4.85
123 124 2.413453 GAGTGGAAAGATGACTCGTTGC 59.587 50.000 0.00 0.00 33.08 4.17
124 125 3.919216 AGAGTGGAAAGATGACTCGTTG 58.081 45.455 0.00 0.00 40.92 4.10
125 126 5.723672 TTAGAGTGGAAAGATGACTCGTT 57.276 39.130 0.00 0.00 40.92 3.85
126 127 5.723672 TTTAGAGTGGAAAGATGACTCGT 57.276 39.130 0.00 0.00 40.92 4.18
127 128 5.926542 TGTTTTAGAGTGGAAAGATGACTCG 59.073 40.000 0.00 0.00 40.92 4.18
128 129 7.730364 TTGTTTTAGAGTGGAAAGATGACTC 57.270 36.000 0.00 0.00 37.05 3.36
129 130 7.775561 AGTTTGTTTTAGAGTGGAAAGATGACT 59.224 33.333 0.00 0.00 0.00 3.41
130 131 7.931275 AGTTTGTTTTAGAGTGGAAAGATGAC 58.069 34.615 0.00 0.00 0.00 3.06
131 132 9.052759 GTAGTTTGTTTTAGAGTGGAAAGATGA 57.947 33.333 0.00 0.00 0.00 2.92
132 133 8.290325 GGTAGTTTGTTTTAGAGTGGAAAGATG 58.710 37.037 0.00 0.00 0.00 2.90
133 134 8.218488 AGGTAGTTTGTTTTAGAGTGGAAAGAT 58.782 33.333 0.00 0.00 0.00 2.40
134 135 7.571025 AGGTAGTTTGTTTTAGAGTGGAAAGA 58.429 34.615 0.00 0.00 0.00 2.52
135 136 7.803279 AGGTAGTTTGTTTTAGAGTGGAAAG 57.197 36.000 0.00 0.00 0.00 2.62
136 137 9.333724 CTAAGGTAGTTTGTTTTAGAGTGGAAA 57.666 33.333 0.00 0.00 0.00 3.13
137 138 8.707449 TCTAAGGTAGTTTGTTTTAGAGTGGAA 58.293 33.333 0.00 0.00 0.00 3.53
138 139 8.146412 GTCTAAGGTAGTTTGTTTTAGAGTGGA 58.854 37.037 0.00 0.00 32.69 4.02
139 140 7.387122 GGTCTAAGGTAGTTTGTTTTAGAGTGG 59.613 40.741 0.00 0.00 32.69 4.00
140 141 7.387122 GGGTCTAAGGTAGTTTGTTTTAGAGTG 59.613 40.741 0.00 0.00 32.69 3.51
141 142 7.291885 AGGGTCTAAGGTAGTTTGTTTTAGAGT 59.708 37.037 0.00 0.00 32.69 3.24
142 143 7.603024 CAGGGTCTAAGGTAGTTTGTTTTAGAG 59.397 40.741 0.00 0.00 32.69 2.43
143 144 7.071572 ACAGGGTCTAAGGTAGTTTGTTTTAGA 59.928 37.037 0.00 0.00 0.00 2.10
144 145 7.222161 ACAGGGTCTAAGGTAGTTTGTTTTAG 58.778 38.462 0.00 0.00 0.00 1.85
145 146 7.140522 ACAGGGTCTAAGGTAGTTTGTTTTA 57.859 36.000 0.00 0.00 0.00 1.52
146 147 6.009908 ACAGGGTCTAAGGTAGTTTGTTTT 57.990 37.500 0.00 0.00 0.00 2.43
147 148 5.641789 ACAGGGTCTAAGGTAGTTTGTTT 57.358 39.130 0.00 0.00 0.00 2.83
148 149 5.374071 CAACAGGGTCTAAGGTAGTTTGTT 58.626 41.667 0.00 0.00 0.00 2.83
149 150 4.745783 GCAACAGGGTCTAAGGTAGTTTGT 60.746 45.833 0.00 0.00 0.00 2.83
150 151 3.751698 GCAACAGGGTCTAAGGTAGTTTG 59.248 47.826 0.00 0.00 0.00 2.93
151 152 3.244805 GGCAACAGGGTCTAAGGTAGTTT 60.245 47.826 0.00 0.00 0.00 2.66
152 153 2.305052 GGCAACAGGGTCTAAGGTAGTT 59.695 50.000 0.00 0.00 0.00 2.24
153 154 1.907255 GGCAACAGGGTCTAAGGTAGT 59.093 52.381 0.00 0.00 0.00 2.73
154 155 1.906574 TGGCAACAGGGTCTAAGGTAG 59.093 52.381 0.00 0.00 46.17 3.18
155 156 2.032965 TGGCAACAGGGTCTAAGGTA 57.967 50.000 0.00 0.00 46.17 3.08
156 157 2.862780 TGGCAACAGGGTCTAAGGT 58.137 52.632 0.00 0.00 46.17 3.50
168 169 0.895100 TGGAGCAAGACCATGGCAAC 60.895 55.000 13.04 3.69 32.03 4.17
169 170 0.895100 GTGGAGCAAGACCATGGCAA 60.895 55.000 13.04 0.00 39.69 4.52
170 171 1.303561 GTGGAGCAAGACCATGGCA 60.304 57.895 13.04 0.00 39.69 4.92
171 172 1.001641 AGTGGAGCAAGACCATGGC 60.002 57.895 13.04 4.70 39.69 4.40
172 173 0.617413 AGAGTGGAGCAAGACCATGG 59.383 55.000 11.19 11.19 39.69 3.66
173 174 3.616956 TTAGAGTGGAGCAAGACCATG 57.383 47.619 0.00 0.00 39.69 3.66
174 175 4.202461 TGTTTTAGAGTGGAGCAAGACCAT 60.202 41.667 0.00 0.00 39.69 3.55
175 176 3.135712 TGTTTTAGAGTGGAGCAAGACCA 59.864 43.478 0.00 0.00 34.84 4.02
176 177 3.740115 TGTTTTAGAGTGGAGCAAGACC 58.260 45.455 0.00 0.00 0.00 3.85
177 178 5.297029 AGTTTGTTTTAGAGTGGAGCAAGAC 59.703 40.000 0.00 0.00 0.00 3.01
178 179 5.296780 CAGTTTGTTTTAGAGTGGAGCAAGA 59.703 40.000 0.00 0.00 0.00 3.02
179 180 5.514279 CAGTTTGTTTTAGAGTGGAGCAAG 58.486 41.667 0.00 0.00 0.00 4.01
180 181 4.202010 GCAGTTTGTTTTAGAGTGGAGCAA 60.202 41.667 0.00 0.00 0.00 3.91
181 182 3.315191 GCAGTTTGTTTTAGAGTGGAGCA 59.685 43.478 0.00 0.00 0.00 4.26
182 183 3.304726 GGCAGTTTGTTTTAGAGTGGAGC 60.305 47.826 0.00 0.00 0.00 4.70
183 184 4.137543 AGGCAGTTTGTTTTAGAGTGGAG 58.862 43.478 0.00 0.00 0.00 3.86
184 185 4.164843 AGGCAGTTTGTTTTAGAGTGGA 57.835 40.909 0.00 0.00 0.00 4.02
185 186 4.499696 CCAAGGCAGTTTGTTTTAGAGTGG 60.500 45.833 0.00 0.00 0.00 4.00
186 187 4.338118 TCCAAGGCAGTTTGTTTTAGAGTG 59.662 41.667 0.00 0.00 0.00 3.51
187 188 4.338400 GTCCAAGGCAGTTTGTTTTAGAGT 59.662 41.667 0.00 0.00 0.00 3.24
188 189 4.261614 GGTCCAAGGCAGTTTGTTTTAGAG 60.262 45.833 0.00 0.00 0.00 2.43
189 190 3.634910 GGTCCAAGGCAGTTTGTTTTAGA 59.365 43.478 0.00 0.00 0.00 2.10
190 191 3.243737 GGGTCCAAGGCAGTTTGTTTTAG 60.244 47.826 0.00 0.00 0.00 1.85
191 192 2.696187 GGGTCCAAGGCAGTTTGTTTTA 59.304 45.455 0.00 0.00 0.00 1.52
192 193 1.484653 GGGTCCAAGGCAGTTTGTTTT 59.515 47.619 0.00 0.00 0.00 2.43
193 194 1.119684 GGGTCCAAGGCAGTTTGTTT 58.880 50.000 0.00 0.00 0.00 2.83
194 195 0.261696 AGGGTCCAAGGCAGTTTGTT 59.738 50.000 0.00 0.00 0.00 2.83
195 196 0.468029 CAGGGTCCAAGGCAGTTTGT 60.468 55.000 0.00 0.00 0.00 2.83
196 197 1.809567 GCAGGGTCCAAGGCAGTTTG 61.810 60.000 0.00 0.00 0.00 2.93
197 198 1.531602 GCAGGGTCCAAGGCAGTTT 60.532 57.895 0.00 0.00 0.00 2.66
198 199 2.116125 GCAGGGTCCAAGGCAGTT 59.884 61.111 0.00 0.00 0.00 3.16
220 221 0.980423 AGAGTGGAAAGAGACAGGCC 59.020 55.000 0.00 0.00 0.00 5.19
384 385 5.817816 GTCTTGATGGTAATCTTCATCGGTT 59.182 40.000 0.00 0.00 41.78 4.44
398 399 4.165565 AGTCATCATCCATGTCTTGATGGT 59.834 41.667 20.62 8.93 44.34 3.55
460 461 2.093235 ACTTGCTGATCAGTTAGGAGGC 60.093 50.000 23.38 8.37 0.00 4.70
464 465 3.373439 GCTTCACTTGCTGATCAGTTAGG 59.627 47.826 23.38 15.20 0.00 2.69
504 506 4.272018 GGACATAGTGAGCATTGTCATCAC 59.728 45.833 9.43 9.43 42.91 3.06
522 524 0.761187 CACTCATGGGGATCGGACAT 59.239 55.000 0.00 0.00 0.00 3.06
563 565 2.753452 CAGCTTGACATGGCAAAGAGAT 59.247 45.455 16.38 0.00 0.00 2.75
578 580 3.940852 TGAAGCCATACATACACAGCTTG 59.059 43.478 0.00 0.00 40.45 4.01
614 616 1.103398 AAACACAGCAGACACAGGGC 61.103 55.000 0.00 0.00 0.00 5.19
616 618 2.802816 GACTAAACACAGCAGACACAGG 59.197 50.000 0.00 0.00 0.00 4.00
695 697 7.095017 CCAGAGTCAAGTTCAGAAAGGATAAAC 60.095 40.741 0.00 0.00 0.00 2.01
825 827 1.003718 GCTTCCCCGCTTACACAGT 60.004 57.895 0.00 0.00 0.00 3.55
828 830 2.399356 GCTGCTTCCCCGCTTACAC 61.399 63.158 0.00 0.00 0.00 2.90
830 832 1.032114 ATTGCTGCTTCCCCGCTTAC 61.032 55.000 0.00 0.00 0.00 2.34
831 833 1.031571 CATTGCTGCTTCCCCGCTTA 61.032 55.000 0.00 0.00 0.00 3.09
833 835 2.753043 CATTGCTGCTTCCCCGCT 60.753 61.111 0.00 0.00 0.00 5.52
834 836 3.830192 CCATTGCTGCTTCCCCGC 61.830 66.667 0.00 0.00 0.00 6.13
835 837 2.045045 TCCATTGCTGCTTCCCCG 60.045 61.111 0.00 0.00 0.00 5.73
836 838 2.054453 GGTCCATTGCTGCTTCCCC 61.054 63.158 0.00 0.00 0.00 4.81
837 839 0.685458 ATGGTCCATTGCTGCTTCCC 60.685 55.000 0.00 0.00 0.00 3.97
838 840 1.678101 GTATGGTCCATTGCTGCTTCC 59.322 52.381 10.33 0.00 0.00 3.46
839 841 2.357009 CTGTATGGTCCATTGCTGCTTC 59.643 50.000 10.33 0.00 0.00 3.86
840 842 2.372264 CTGTATGGTCCATTGCTGCTT 58.628 47.619 10.33 0.00 0.00 3.91
841 843 2.020694 GCTGTATGGTCCATTGCTGCT 61.021 52.381 10.33 0.00 0.00 4.24
842 844 0.383231 GCTGTATGGTCCATTGCTGC 59.617 55.000 10.33 14.31 0.00 5.25
843 845 1.674441 CAGCTGTATGGTCCATTGCTG 59.326 52.381 25.74 25.74 36.28 4.41
844 846 1.561076 TCAGCTGTATGGTCCATTGCT 59.439 47.619 14.67 14.14 0.00 3.91
845 847 1.672881 GTCAGCTGTATGGTCCATTGC 59.327 52.381 14.67 12.15 0.00 3.56
846 848 2.292267 GGTCAGCTGTATGGTCCATTG 58.708 52.381 14.67 1.66 0.00 2.82
847 849 1.134401 CGGTCAGCTGTATGGTCCATT 60.134 52.381 14.67 0.00 0.00 3.16
848 850 0.465705 CGGTCAGCTGTATGGTCCAT 59.534 55.000 14.67 9.88 0.00 3.41
849 851 1.613317 CCGGTCAGCTGTATGGTCCA 61.613 60.000 14.67 0.00 0.00 4.02
850 852 1.144057 CCGGTCAGCTGTATGGTCC 59.856 63.158 14.67 7.09 0.00 4.46
851 853 1.521681 GCCGGTCAGCTGTATGGTC 60.522 63.158 14.67 6.58 0.00 4.02
852 854 2.584608 GCCGGTCAGCTGTATGGT 59.415 61.111 14.67 0.00 0.00 3.55
853 855 2.586079 CGCCGGTCAGCTGTATGG 60.586 66.667 14.67 14.26 0.00 2.74
854 856 2.586079 CCGCCGGTCAGCTGTATG 60.586 66.667 14.67 4.26 0.00 2.39
855 857 4.530857 GCCGCCGGTCAGCTGTAT 62.531 66.667 14.67 0.00 0.00 2.29
867 869 2.676471 ATTGTTGGTGGAGCCGCC 60.676 61.111 12.17 12.17 46.15 6.13
898 900 6.224420 ACGACGAATTACCTCTTTCTTTTG 57.776 37.500 0.00 0.00 0.00 2.44
899 901 6.856135 AACGACGAATTACCTCTTTCTTTT 57.144 33.333 0.00 0.00 0.00 2.27
900 902 6.073385 GGAAACGACGAATTACCTCTTTCTTT 60.073 38.462 0.00 0.00 0.00 2.52
901 903 5.407691 GGAAACGACGAATTACCTCTTTCTT 59.592 40.000 0.00 0.00 0.00 2.52
920 928 5.175673 CGAAGCAGGAAATCAAAAAGGAAAC 59.824 40.000 0.00 0.00 0.00 2.78
930 938 2.229792 AGCAAACGAAGCAGGAAATCA 58.770 42.857 0.00 0.00 0.00 2.57
1167 1262 4.908601 TCCAAGAATACAGAAGCAAGGA 57.091 40.909 0.00 0.00 0.00 3.36
1286 1381 9.702726 CAGGAAACAAATATGATTACTACAACG 57.297 33.333 0.00 0.00 31.22 4.10
1343 1438 3.053619 AGACTGACCAAAGACACCCTTTT 60.054 43.478 0.00 0.00 42.13 2.27
1481 1580 1.211457 GATTGAGTGTGAGGCCCTGAT 59.789 52.381 0.00 0.00 0.00 2.90
1555 1654 9.752961 GCAAAGTAAGGGTTAAATTTTTGTCTA 57.247 29.630 0.00 0.00 0.00 2.59
1641 1740 4.352893 AGGGGGTAACTTTAGAGCTTTCAA 59.647 41.667 0.00 0.00 0.00 2.69
1911 2011 1.995376 ACCAACCATTTGACCAGGTC 58.005 50.000 13.35 13.35 34.24 3.85
2080 2180 0.169672 CAGTCCTTCAATGCTTGCCG 59.830 55.000 0.00 0.00 0.00 5.69
2166 2266 1.069022 CACATTGACCAAAGCTCACCG 60.069 52.381 0.00 0.00 0.00 4.94
2209 2372 6.575162 ACAAAAGGTGCCTGATTTAGTAAG 57.425 37.500 0.00 0.00 0.00 2.34
2294 2457 4.974399 AGGCAGCAAGTTAAGACTAAAGT 58.026 39.130 0.00 0.00 34.21 2.66
2406 2569 8.997323 CAGAAGAAAAGGCCTTCACATATATAG 58.003 37.037 20.79 0.00 41.73 1.31
2424 2587 4.702131 GCCTGGAAAGAATAGCAGAAGAAA 59.298 41.667 0.00 0.00 0.00 2.52
2673 3857 3.296322 AATTTGTTGCATACACCGTGG 57.704 42.857 3.03 0.00 36.21 4.94
2933 4117 9.570468 AAATGACGTCTATTGATCCTACTACTA 57.430 33.333 17.92 0.00 0.00 1.82
2934 4118 8.466617 AAATGACGTCTATTGATCCTACTACT 57.533 34.615 17.92 0.00 0.00 2.57
2935 4119 9.530633 AAAAATGACGTCTATTGATCCTACTAC 57.469 33.333 17.92 0.00 0.00 2.73
2958 4142 4.065088 CCCGATGAAGACAGTGAGAAAAA 58.935 43.478 0.00 0.00 0.00 1.94
2959 4143 3.323691 TCCCGATGAAGACAGTGAGAAAA 59.676 43.478 0.00 0.00 0.00 2.29
2960 4144 2.897326 TCCCGATGAAGACAGTGAGAAA 59.103 45.455 0.00 0.00 0.00 2.52
2961 4145 2.493675 CTCCCGATGAAGACAGTGAGAA 59.506 50.000 0.00 0.00 0.00 2.87
2962 4146 2.095461 CTCCCGATGAAGACAGTGAGA 58.905 52.381 0.00 0.00 0.00 3.27
2963 4147 1.470632 GCTCCCGATGAAGACAGTGAG 60.471 57.143 0.00 0.00 0.00 3.51
2964 4148 0.532573 GCTCCCGATGAAGACAGTGA 59.467 55.000 0.00 0.00 0.00 3.41
2965 4149 0.247460 TGCTCCCGATGAAGACAGTG 59.753 55.000 0.00 0.00 0.00 3.66
2966 4150 1.137872 GATGCTCCCGATGAAGACAGT 59.862 52.381 0.00 0.00 0.00 3.55
2967 4151 1.137675 TGATGCTCCCGATGAAGACAG 59.862 52.381 0.00 0.00 0.00 3.51
2968 4152 1.194218 TGATGCTCCCGATGAAGACA 58.806 50.000 0.00 0.00 0.00 3.41
2969 4153 2.208431 CTTGATGCTCCCGATGAAGAC 58.792 52.381 0.00 0.00 0.00 3.01
2970 4154 1.473965 GCTTGATGCTCCCGATGAAGA 60.474 52.381 0.00 0.00 38.95 2.87
2971 4155 0.942962 GCTTGATGCTCCCGATGAAG 59.057 55.000 0.00 0.00 38.95 3.02
2972 4156 0.464373 GGCTTGATGCTCCCGATGAA 60.464 55.000 0.00 0.00 42.39 2.57
2973 4157 1.146930 GGCTTGATGCTCCCGATGA 59.853 57.895 0.00 0.00 42.39 2.92
2974 4158 0.536687 ATGGCTTGATGCTCCCGATG 60.537 55.000 0.00 0.00 42.39 3.84
2975 4159 1.059098 TATGGCTTGATGCTCCCGAT 58.941 50.000 0.00 0.00 42.39 4.18
2976 4160 1.002430 GATATGGCTTGATGCTCCCGA 59.998 52.381 0.00 0.00 42.39 5.14
2977 4161 1.446907 GATATGGCTTGATGCTCCCG 58.553 55.000 0.00 0.00 42.39 5.14
2978 4162 1.615384 GGGATATGGCTTGATGCTCCC 60.615 57.143 0.63 0.63 42.65 4.30
2979 4163 1.615384 GGGGATATGGCTTGATGCTCC 60.615 57.143 0.00 0.00 42.39 4.70
2980 4164 1.831580 GGGGATATGGCTTGATGCTC 58.168 55.000 0.00 0.00 42.39 4.26
2981 4165 0.037303 CGGGGATATGGCTTGATGCT 59.963 55.000 0.00 0.00 42.39 3.79
2982 4166 1.589716 GCGGGGATATGGCTTGATGC 61.590 60.000 0.00 0.00 41.94 3.91
2983 4167 0.250858 TGCGGGGATATGGCTTGATG 60.251 55.000 0.00 0.00 0.00 3.07
2984 4168 0.478072 TTGCGGGGATATGGCTTGAT 59.522 50.000 0.00 0.00 0.00 2.57
2985 4169 0.179020 CTTGCGGGGATATGGCTTGA 60.179 55.000 0.00 0.00 0.00 3.02
2986 4170 1.174712 CCTTGCGGGGATATGGCTTG 61.175 60.000 0.00 0.00 0.00 4.01
2987 4171 1.151450 CCTTGCGGGGATATGGCTT 59.849 57.895 0.00 0.00 0.00 4.35
2988 4172 2.078665 ACCTTGCGGGGATATGGCT 61.079 57.895 1.64 0.00 40.03 4.75
2989 4173 1.898574 CACCTTGCGGGGATATGGC 60.899 63.158 1.64 0.00 34.80 4.40
2990 4174 1.898574 GCACCTTGCGGGGATATGG 60.899 63.158 1.64 0.00 34.80 2.74
2991 4175 3.749981 GCACCTTGCGGGGATATG 58.250 61.111 1.64 0.00 34.80 1.78
3000 4184 0.242017 GTGGATGTTGAGCACCTTGC 59.758 55.000 0.00 0.00 45.46 4.01
3001 4185 0.883833 GGTGGATGTTGAGCACCTTG 59.116 55.000 0.00 0.00 33.44 3.61
3002 4186 0.478072 TGGTGGATGTTGAGCACCTT 59.522 50.000 0.00 0.00 36.90 3.50
3003 4187 0.250901 GTGGTGGATGTTGAGCACCT 60.251 55.000 0.00 0.00 35.08 4.00
3004 4188 1.577328 CGTGGTGGATGTTGAGCACC 61.577 60.000 0.00 0.00 37.30 5.01
3005 4189 0.884704 ACGTGGTGGATGTTGAGCAC 60.885 55.000 0.00 0.00 37.26 4.40
3006 4190 0.179032 AACGTGGTGGATGTTGAGCA 60.179 50.000 0.00 0.00 32.19 4.26
3007 4191 0.951558 AAACGTGGTGGATGTTGAGC 59.048 50.000 0.00 0.00 33.81 4.26
3008 4192 5.371115 AAATAAACGTGGTGGATGTTGAG 57.629 39.130 0.00 0.00 33.81 3.02
3009 4193 5.561145 CGAAAATAAACGTGGTGGATGTTGA 60.561 40.000 0.00 0.00 33.81 3.18
3010 4194 4.615121 CGAAAATAAACGTGGTGGATGTTG 59.385 41.667 0.00 0.00 33.81 3.33
3011 4195 4.789784 CGAAAATAAACGTGGTGGATGTT 58.210 39.130 0.00 0.00 35.11 2.71
3012 4196 3.365565 GCGAAAATAAACGTGGTGGATGT 60.366 43.478 0.00 0.00 0.00 3.06
3013 4197 3.168193 GCGAAAATAAACGTGGTGGATG 58.832 45.455 0.00 0.00 0.00 3.51
3014 4198 2.814919 TGCGAAAATAAACGTGGTGGAT 59.185 40.909 0.00 0.00 0.00 3.41
3015 4199 2.219458 TGCGAAAATAAACGTGGTGGA 58.781 42.857 0.00 0.00 0.00 4.02
3016 4200 2.224549 TCTGCGAAAATAAACGTGGTGG 59.775 45.455 0.00 0.00 0.00 4.61
3017 4201 3.529634 TCTGCGAAAATAAACGTGGTG 57.470 42.857 0.00 0.00 0.00 4.17
3018 4202 3.608474 GCTTCTGCGAAAATAAACGTGGT 60.608 43.478 0.00 0.00 0.00 4.16
3019 4203 2.908626 GCTTCTGCGAAAATAAACGTGG 59.091 45.455 0.00 0.00 0.00 4.94
3020 4204 3.599514 CAGCTTCTGCGAAAATAAACGTG 59.400 43.478 0.00 0.00 45.42 4.49
3021 4205 3.250040 ACAGCTTCTGCGAAAATAAACGT 59.750 39.130 0.00 0.00 45.42 3.99
3022 4206 3.599514 CACAGCTTCTGCGAAAATAAACG 59.400 43.478 0.00 0.00 45.42 3.60
3023 4207 4.537015 ACACAGCTTCTGCGAAAATAAAC 58.463 39.130 0.00 0.00 45.42 2.01
3024 4208 4.829064 ACACAGCTTCTGCGAAAATAAA 57.171 36.364 0.00 0.00 45.42 1.40
3025 4209 4.752604 TGTACACAGCTTCTGCGAAAATAA 59.247 37.500 0.00 0.00 45.42 1.40
3026 4210 4.151689 GTGTACACAGCTTCTGCGAAAATA 59.848 41.667 21.14 0.00 45.42 1.40
3027 4211 3.058914 GTGTACACAGCTTCTGCGAAAAT 60.059 43.478 21.14 0.00 45.42 1.82
3028 4212 2.286833 GTGTACACAGCTTCTGCGAAAA 59.713 45.455 21.14 0.00 45.42 2.29
3029 4213 1.864711 GTGTACACAGCTTCTGCGAAA 59.135 47.619 21.14 0.00 45.42 3.46
3030 4214 1.497991 GTGTACACAGCTTCTGCGAA 58.502 50.000 21.14 0.00 45.42 4.70
3031 4215 0.663269 CGTGTACACAGCTTCTGCGA 60.663 55.000 24.98 0.00 45.42 5.10
3032 4216 0.939577 ACGTGTACACAGCTTCTGCG 60.940 55.000 24.98 10.59 45.42 5.18
3033 4217 2.060326 TACGTGTACACAGCTTCTGC 57.940 50.000 24.98 0.00 34.37 4.26
3034 4218 4.098055 AGATACGTGTACACAGCTTCTG 57.902 45.455 24.98 9.71 37.52 3.02
3035 4219 4.785511 AAGATACGTGTACACAGCTTCT 57.214 40.909 24.98 16.72 0.00 2.85
3036 4220 4.684703 ACAAAGATACGTGTACACAGCTTC 59.315 41.667 24.98 14.95 0.00 3.86
3037 4221 4.447724 CACAAAGATACGTGTACACAGCTT 59.552 41.667 24.98 17.14 0.00 3.74
3038 4222 3.987868 CACAAAGATACGTGTACACAGCT 59.012 43.478 24.98 12.15 0.00 4.24
3039 4223 3.423123 GCACAAAGATACGTGTACACAGC 60.423 47.826 24.98 9.97 35.51 4.40
3040 4224 3.181544 CGCACAAAGATACGTGTACACAG 60.182 47.826 24.98 18.81 35.51 3.66
3041 4225 2.727278 CGCACAAAGATACGTGTACACA 59.273 45.455 24.98 7.66 35.51 3.72
3042 4226 2.091588 CCGCACAAAGATACGTGTACAC 59.908 50.000 16.32 16.32 35.51 2.90
3043 4227 2.030096 TCCGCACAAAGATACGTGTACA 60.030 45.455 0.00 0.00 35.51 2.90
3044 4228 2.598589 TCCGCACAAAGATACGTGTAC 58.401 47.619 0.00 0.00 35.51 2.90
3045 4229 3.247442 CTTCCGCACAAAGATACGTGTA 58.753 45.455 0.00 0.00 35.51 2.90
3046 4230 2.066262 CTTCCGCACAAAGATACGTGT 58.934 47.619 0.00 0.00 35.51 4.49
3047 4231 1.393539 CCTTCCGCACAAAGATACGTG 59.606 52.381 0.00 0.00 36.18 4.49
3048 4232 1.274167 TCCTTCCGCACAAAGATACGT 59.726 47.619 0.00 0.00 0.00 3.57
3049 4233 1.659098 GTCCTTCCGCACAAAGATACG 59.341 52.381 0.00 0.00 0.00 3.06
3050 4234 2.673368 CAGTCCTTCCGCACAAAGATAC 59.327 50.000 0.00 0.00 0.00 2.24
3051 4235 2.935238 GCAGTCCTTCCGCACAAAGATA 60.935 50.000 0.00 0.00 0.00 1.98
3052 4236 1.813513 CAGTCCTTCCGCACAAAGAT 58.186 50.000 0.00 0.00 0.00 2.40
3053 4237 0.884704 GCAGTCCTTCCGCACAAAGA 60.885 55.000 0.00 0.00 0.00 2.52
3054 4238 1.165907 TGCAGTCCTTCCGCACAAAG 61.166 55.000 0.00 0.00 0.00 2.77
3055 4239 0.537143 ATGCAGTCCTTCCGCACAAA 60.537 50.000 0.00 0.00 38.73 2.83
3056 4240 1.073025 ATGCAGTCCTTCCGCACAA 59.927 52.632 0.00 0.00 38.73 3.33
3057 4241 1.672030 CATGCAGTCCTTCCGCACA 60.672 57.895 0.00 0.00 38.73 4.57
3058 4242 3.044059 GCATGCAGTCCTTCCGCAC 62.044 63.158 14.21 0.00 38.73 5.34
3059 4243 2.747460 GCATGCAGTCCTTCCGCA 60.747 61.111 14.21 0.00 40.50 5.69
3060 4244 2.747460 TGCATGCAGTCCTTCCGC 60.747 61.111 18.46 0.00 0.00 5.54
3061 4245 2.401766 GGTGCATGCAGTCCTTCCG 61.402 63.158 23.41 0.00 0.00 4.30
3062 4246 2.401766 CGGTGCATGCAGTCCTTCC 61.402 63.158 23.41 16.53 0.00 3.46
3063 4247 1.639298 GACGGTGCATGCAGTCCTTC 61.639 60.000 23.41 18.41 0.00 3.46
3064 4248 1.672356 GACGGTGCATGCAGTCCTT 60.672 57.895 23.41 13.61 0.00 3.36
3065 4249 2.046892 GACGGTGCATGCAGTCCT 60.047 61.111 23.41 9.58 0.00 3.85
3066 4250 1.746615 ATGACGGTGCATGCAGTCC 60.747 57.895 27.70 22.35 33.04 3.85
3067 4251 1.426621 CATGACGGTGCATGCAGTC 59.573 57.895 25.45 25.45 39.19 3.51
3068 4252 3.582148 CATGACGGTGCATGCAGT 58.418 55.556 23.41 17.05 39.19 4.40
3086 4270 1.084370 GGAAATCTGAGGCGTGACCG 61.084 60.000 0.00 0.00 46.52 4.79
3087 4271 0.250513 AGGAAATCTGAGGCGTGACC 59.749 55.000 0.00 0.00 39.61 4.02
3088 4272 1.646189 GAGGAAATCTGAGGCGTGAC 58.354 55.000 0.00 0.00 0.00 3.67
3089 4273 0.173481 CGAGGAAATCTGAGGCGTGA 59.827 55.000 0.00 0.00 0.00 4.35
3090 4274 1.424493 GCGAGGAAATCTGAGGCGTG 61.424 60.000 0.00 0.00 0.00 5.34
3091 4275 1.153549 GCGAGGAAATCTGAGGCGT 60.154 57.895 0.00 0.00 0.00 5.68
3092 4276 1.884926 GGCGAGGAAATCTGAGGCG 60.885 63.158 0.00 0.00 0.00 5.52
3093 4277 1.524849 GGGCGAGGAAATCTGAGGC 60.525 63.158 0.00 0.00 0.00 4.70
3094 4278 0.543749 AAGGGCGAGGAAATCTGAGG 59.456 55.000 0.00 0.00 0.00 3.86
3095 4279 1.804372 CGAAGGGCGAGGAAATCTGAG 60.804 57.143 0.00 0.00 44.57 3.35
3096 4280 0.175760 CGAAGGGCGAGGAAATCTGA 59.824 55.000 0.00 0.00 44.57 3.27
3097 4281 1.432270 GCGAAGGGCGAGGAAATCTG 61.432 60.000 0.00 0.00 44.57 2.90
3098 4282 1.153349 GCGAAGGGCGAGGAAATCT 60.153 57.895 0.00 0.00 44.57 2.40
3099 4283 3.410958 GCGAAGGGCGAGGAAATC 58.589 61.111 0.00 0.00 44.57 2.17
3108 4292 0.102481 TCGAGATACTTGCGAAGGGC 59.898 55.000 0.00 0.00 43.96 5.19
3109 4293 2.034685 TGATCGAGATACTTGCGAAGGG 59.965 50.000 0.00 0.00 37.60 3.95
3110 4294 3.355626 TGATCGAGATACTTGCGAAGG 57.644 47.619 0.00 0.00 37.60 3.46
3111 4295 4.205996 CAGTTGATCGAGATACTTGCGAAG 59.794 45.833 0.00 0.00 37.60 3.79
3112 4296 4.105486 CAGTTGATCGAGATACTTGCGAA 58.895 43.478 0.00 0.00 37.60 4.70
3113 4297 3.489229 CCAGTTGATCGAGATACTTGCGA 60.489 47.826 0.00 0.00 38.51 5.10
3114 4298 2.791560 CCAGTTGATCGAGATACTTGCG 59.208 50.000 0.00 0.00 0.00 4.85
3115 4299 3.553511 CACCAGTTGATCGAGATACTTGC 59.446 47.826 0.00 0.00 0.00 4.01
3116 4300 3.553511 GCACCAGTTGATCGAGATACTTG 59.446 47.826 0.00 0.00 0.00 3.16
3117 4301 3.195610 TGCACCAGTTGATCGAGATACTT 59.804 43.478 0.00 0.00 0.00 2.24
3118 4302 2.760650 TGCACCAGTTGATCGAGATACT 59.239 45.455 0.00 0.00 0.00 2.12
3119 4303 2.860735 GTGCACCAGTTGATCGAGATAC 59.139 50.000 5.22 0.00 0.00 2.24
3120 4304 2.479560 CGTGCACCAGTTGATCGAGATA 60.480 50.000 12.15 0.00 0.00 1.98
3121 4305 1.737029 CGTGCACCAGTTGATCGAGAT 60.737 52.381 12.15 0.00 0.00 2.75
3122 4306 0.388520 CGTGCACCAGTTGATCGAGA 60.389 55.000 12.15 0.00 0.00 4.04
3123 4307 0.388520 TCGTGCACCAGTTGATCGAG 60.389 55.000 12.15 0.00 31.51 4.04
3124 4308 0.388520 CTCGTGCACCAGTTGATCGA 60.389 55.000 12.15 0.24 33.22 3.59
3125 4309 0.388520 TCTCGTGCACCAGTTGATCG 60.389 55.000 12.15 0.00 0.00 3.69
3126 4310 1.071605 GTCTCGTGCACCAGTTGATC 58.928 55.000 12.15 0.00 0.00 2.92
3127 4311 0.392706 TGTCTCGTGCACCAGTTGAT 59.607 50.000 12.15 0.00 0.00 2.57
3128 4312 0.529773 GTGTCTCGTGCACCAGTTGA 60.530 55.000 12.15 0.83 0.00 3.18
3129 4313 1.821241 CGTGTCTCGTGCACCAGTTG 61.821 60.000 12.15 0.00 33.61 3.16
3130 4314 1.591594 CGTGTCTCGTGCACCAGTT 60.592 57.895 12.15 0.00 33.61 3.16
3131 4315 2.027605 CGTGTCTCGTGCACCAGT 59.972 61.111 12.15 0.00 33.61 4.00
3132 4316 2.734723 CCGTGTCTCGTGCACCAG 60.735 66.667 12.15 8.45 37.94 4.00
3133 4317 3.220658 TCCGTGTCTCGTGCACCA 61.221 61.111 12.15 0.00 37.94 4.17
3134 4318 2.733593 GTCCGTGTCTCGTGCACC 60.734 66.667 12.15 0.00 37.94 5.01
3135 4319 2.733593 GGTCCGTGTCTCGTGCAC 60.734 66.667 6.82 6.82 37.94 4.57
3136 4320 4.337060 CGGTCCGTGTCTCGTGCA 62.337 66.667 2.08 0.00 37.94 4.57
3137 4321 4.338539 ACGGTCCGTGTCTCGTGC 62.339 66.667 18.08 0.00 39.18 5.34
3138 4322 2.126965 GACGGTCCGTGTCTCGTG 60.127 66.667 24.45 0.00 41.37 4.35
3139 4323 1.970114 ATGACGGTCCGTGTCTCGT 60.970 57.895 24.45 5.62 41.37 4.18
3140 4324 1.514228 CATGACGGTCCGTGTCTCG 60.514 63.158 24.45 1.39 41.37 4.04
3141 4325 1.805945 GCATGACGGTCCGTGTCTC 60.806 63.158 24.45 7.86 41.37 3.36
3142 4326 2.214181 GAGCATGACGGTCCGTGTCT 62.214 60.000 24.45 12.49 41.37 3.41
3143 4327 1.805945 GAGCATGACGGTCCGTGTC 60.806 63.158 24.45 9.10 41.37 3.67
3144 4328 1.888436 ATGAGCATGACGGTCCGTGT 61.888 55.000 24.45 7.43 41.37 4.49
3145 4329 0.102300 TATGAGCATGACGGTCCGTG 59.898 55.000 24.45 9.00 41.37 4.94
3146 4330 0.102481 GTATGAGCATGACGGTCCGT 59.898 55.000 18.94 18.94 45.10 4.69
3147 4331 0.597637 GGTATGAGCATGACGGTCCG 60.598 60.000 10.48 10.48 41.69 4.79
3148 4332 0.753262 AGGTATGAGCATGACGGTCC 59.247 55.000 5.55 0.00 41.69 4.46
3149 4333 1.409064 TGAGGTATGAGCATGACGGTC 59.591 52.381 0.00 0.00 42.75 4.79
3150 4334 1.410517 CTGAGGTATGAGCATGACGGT 59.589 52.381 0.00 0.00 0.00 4.83
3151 4335 1.683385 TCTGAGGTATGAGCATGACGG 59.317 52.381 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.