AutoCloner

Multiple sequence alignment - TraesCS6A01G143600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS6A01G143600	chr6A	100.000	4148	0	0	1	4148	119792993	119788846	0.000000e+00	7661
1	TraesCS6A01G143600	chr6A	83.848	421	49	13	4	416	279946816	279947225	2.340000e-102	383
2	TraesCS6A01G143600	chr6B	92.589	3279	161	42	901	4141	184364586	184361352	0.000000e+00	4634
3	TraesCS6A01G143600	chr6B	88.679	424	38	8	4	417	34949917	34949494	3.700000e-140	508
4	TraesCS6A01G143600	chr6B	87.363	182	6	2	746	910	184364790	184364609	4.230000e-45	193
5	TraesCS6A01G143600	chr6D	86.596	567	63	2	2714	3267	100541479	100540913	7.620000e-172	614
6	TraesCS6A01G143600	chr3A	78.195	853	157	19	2429	3260	630761998	630762842	6.150000e-143	518
7	TraesCS6A01G143600	chr3A	76.752	899	172	24	2387	3260	630769526	630770412	6.280000e-128	468
8	TraesCS6A01G143600	chr3A	83.848	421	49	13	4	416	560685314	560685723	2.340000e-102	383
9	TraesCS6A01G143600	chr3D	77.661	855	172	17	1225	2071	487118559	487119402	1.720000e-138	503
10	TraesCS6A01G143600	chr3D	76.889	900	175	24	2387	3260	487119691	487120583	2.900000e-131	479
11	TraesCS6A01G143600	chr3B	76.872	908	179	21	2375	3260	649998440	649999338	6.230000e-133	484
12	TraesCS6A01G143600	chr3B	77.389	858	164	19	2387	3221	650057506	650058356	2.240000e-132	483
13	TraesCS6A01G143600	chr7A	84.248	419	46	10	6	416	717280310	717279904	1.400000e-104	390
14	TraesCS6A01G143600	chr7A	83.841	427	50	11	4	419	349112	348694	5.030000e-104	388
15	TraesCS6A01G143600	chr7B	83.610	421	50	13	4	416	62698296	62697887	1.090000e-100	377
16	TraesCS6A01G143600	chr5A	83.610	421	50	13	4	416	666047346	666047755	1.090000e-100	377
17	TraesCS6A01G143600	chr4A	83.610	421	50	13	4	416	140987545	140987954	1.090000e-100	377
18	TraesCS6A01G143600	chr4A	81.755	433	63	12	4	422	721510738	721510308	8.530000e-92	348
19	TraesCS6A01G143600	chr4A	81.567	434	62	14	4	422	721580797	721580367	3.970000e-90	342
20	TraesCS6A01G143600	chr1A	82.864	426	48	17	4	419	496141194	496141604	3.940000e-95	359
21	TraesCS6A01G143600	chr1A	82.394	426	55	12	4	421	552326944	552326531	1.830000e-93	353
22	TraesCS6A01G143600	chr1B	91.489	94	6	1	424	517	577978046	577977955	1.210000e-25	128

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS6A01G143600	chr6A	119788846	119792993	4147	True	7661.0	7661	100.000	1	4148	1	chr6A.!!$R1	4147
1	TraesCS6A01G143600	chr6B	184361352	184364790	3438	True	2413.5	4634	89.976	746	4141	2	chr6B.!!$R2	3395
2	TraesCS6A01G143600	chr6D	100540913	100541479	566	True	614.0	614	86.596	2714	3267	1	chr6D.!!$R1	553
3	TraesCS6A01G143600	chr3A	630761998	630762842	844	False	518.0	518	78.195	2429	3260	1	chr3A.!!$F2	831
4	TraesCS6A01G143600	chr3A	630769526	630770412	886	False	468.0	468	76.752	2387	3260	1	chr3A.!!$F3	873
5	TraesCS6A01G143600	chr3D	487118559	487120583	2024	False	491.0	503	77.275	1225	3260	2	chr3D.!!$F1	2035
6	TraesCS6A01G143600	chr3B	649998440	649999338	898	False	484.0	484	76.872	2375	3260	1	chr3B.!!$F1	885
7	TraesCS6A01G143600	chr3B	650057506	650058356	850	False	483.0	483	77.389	2387	3221	1	chr3B.!!$F2	834

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Hairpin	End Stability	Orientation
167	168	0.023354	GTAACGCACGCATCTTCGAC	59.977	55.0	0.00	4.20	F
671	672	0.037326	ACGGAGTGTGTGCTATGGTG	60.037	55.0	42.51	4.17	F
675	676	0.679505	AGTGTGTGCTATGGTGTCGT	59.320	50.0	0.00	4.34	F
1064	1120	0.690411	CTCCTCTGCTCCCTCACCAT	60.690	60.0	0.00	3.55	F
1888	1944	0.955919	CTCCCTCGGCTTCAACAACC	60.956	60.0	0.00	3.77	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1996	2052	0.104120	CATGGGATGCCATTGTGCAG	59.896	55.000	17.32	0.00	45.93	4.41	R
2067	2123	0.604511	TCGTGTCTCCGTAGCTCACA	60.605	55.000	0.00	0.00	31.92	3.58	R
2103	2159	1.153823	CGACGTGACCCCAGTGATC	60.154	63.158	0.00	0.00	0.00	2.92	R
2394	2450	1.453524	GTGATATACTTGAGCAGCGCG	59.546	52.381	0.00	0.00	0.00	6.86	R
3645	3739	0.179001	ATTATGGCTTACACCCGGGC	60.179	55.000	24.08	4.66	0.00	6.13	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
20	21	0.881118	TTGTTTCGCAATCCTGGAGC	59.119	50.000	1.52	0.00	31.07	4.70
21	22	0.036732	TGTTTCGCAATCCTGGAGCT	59.963	50.000	1.52	0.00	0.00	4.09
22	23	1.277842	TGTTTCGCAATCCTGGAGCTA	59.722	47.619	1.52	0.00	0.00	3.32
23	24	2.290008	TGTTTCGCAATCCTGGAGCTAA	60.290	45.455	1.52	0.00	0.00	3.09
24	25	2.747446	GTTTCGCAATCCTGGAGCTAAA	59.253	45.455	1.52	3.21	0.00	1.85
25	26	2.024176	TCGCAATCCTGGAGCTAAAC	57.976	50.000	1.52	0.00	0.00	2.01
26	27	1.017387	CGCAATCCTGGAGCTAAACC	58.983	55.000	1.52	0.00	0.00	3.27
27	28	1.393603	GCAATCCTGGAGCTAAACCC	58.606	55.000	1.52	0.00	0.00	4.11
28	29	1.064389	GCAATCCTGGAGCTAAACCCT	60.064	52.381	1.52	0.00	0.00	4.34
29	30	2.648059	CAATCCTGGAGCTAAACCCTG	58.352	52.381	1.52	0.00	0.00	4.45
30	31	1.216990	ATCCTGGAGCTAAACCCTGG	58.783	55.000	1.52	8.38	41.34	4.45
31	32	1.077429	CCTGGAGCTAAACCCTGGC	60.077	63.158	2.66	0.00	35.28	4.85
32	33	1.450312	CTGGAGCTAAACCCTGGCG	60.450	63.158	0.00	0.00	0.00	5.69
33	34	2.824489	GGAGCTAAACCCTGGCGC	60.824	66.667	0.00	0.00	0.00	6.53
34	35	2.046314	GAGCTAAACCCTGGCGCA	60.046	61.111	10.83	0.00	0.00	6.09
35	36	1.452108	GAGCTAAACCCTGGCGCAT	60.452	57.895	10.83	0.00	0.00	4.73
36	37	1.718757	GAGCTAAACCCTGGCGCATG	61.719	60.000	10.83	0.00	0.00	4.06
37	38	2.774799	GCTAAACCCTGGCGCATGG	61.775	63.158	10.83	10.62	0.00	3.66
38	39	1.077787	CTAAACCCTGGCGCATGGA	60.078	57.895	17.80	0.00	0.00	3.41
39	40	1.376609	CTAAACCCTGGCGCATGGAC	61.377	60.000	17.80	0.00	0.00	4.02
63	64	4.087892	CTCGCCCTGGGTGGACTG	62.088	72.222	25.34	10.16	38.35	3.51
66	67	3.017581	GCCCTGGGTGGACTGGAT	61.018	66.667	15.56	0.00	38.35	3.41
67	68	3.049080	GCCCTGGGTGGACTGGATC	62.049	68.421	15.56	0.00	38.35	3.36
68	69	1.616327	CCCTGGGTGGACTGGATCA	60.616	63.158	3.97	0.00	38.35	2.92
69	70	1.630126	CCCTGGGTGGACTGGATCAG	61.630	65.000	3.97	0.00	38.35	2.90
70	71	1.222936	CTGGGTGGACTGGATCAGC	59.777	63.158	0.00	0.00	34.37	4.26
71	72	1.538629	TGGGTGGACTGGATCAGCA	60.539	57.895	0.00	0.00	34.37	4.41
72	73	1.133181	TGGGTGGACTGGATCAGCAA	61.133	55.000	0.00	0.00	34.37	3.91
73	74	0.678048	GGGTGGACTGGATCAGCAAC	60.678	60.000	0.00	0.00	34.37	4.17
74	75	0.036732	GGTGGACTGGATCAGCAACA	59.963	55.000	0.00	0.00	34.37	3.33
75	76	1.340405	GGTGGACTGGATCAGCAACAT	60.340	52.381	0.00	0.00	34.37	2.71
76	77	1.741706	GTGGACTGGATCAGCAACATG	59.258	52.381	0.00	0.00	34.37	3.21
77	78	1.629861	TGGACTGGATCAGCAACATGA	59.370	47.619	0.00	0.00	34.37	3.07
78	79	2.286872	GGACTGGATCAGCAACATGAG	58.713	52.381	0.00	0.00	34.37	2.90
79	80	1.669779	GACTGGATCAGCAACATGAGC	59.330	52.381	0.00	2.85	34.37	4.26
81	82	2.020131	GGATCAGCAACATGAGCCG	58.980	57.895	0.00	0.00	45.10	5.52
82	83	0.745845	GGATCAGCAACATGAGCCGT	60.746	55.000	0.00	0.00	45.10	5.68
83	84	0.376152	GATCAGCAACATGAGCCGTG	59.624	55.000	0.00	0.00	31.44	4.94
84	85	0.321919	ATCAGCAACATGAGCCGTGT	60.322	50.000	0.00	0.00	34.83	4.49
85	86	1.208358	CAGCAACATGAGCCGTGTG	59.792	57.895	0.00	0.00	33.54	3.82
86	87	1.071299	AGCAACATGAGCCGTGTGA	59.929	52.632	0.00	0.00	33.54	3.58
87	88	1.207593	GCAACATGAGCCGTGTGAC	59.792	57.895	0.00	0.00	33.54	3.67
88	89	1.230635	GCAACATGAGCCGTGTGACT	61.231	55.000	0.00	0.00	33.54	3.41
89	90	1.229428	CAACATGAGCCGTGTGACTT	58.771	50.000	0.00	0.00	33.54	3.01
90	91	1.195448	CAACATGAGCCGTGTGACTTC	59.805	52.381	0.00	0.00	33.54	3.01
91	92	0.320771	ACATGAGCCGTGTGACTTCC	60.321	55.000	0.00	0.00	31.87	3.46
92	93	0.320683	CATGAGCCGTGTGACTTCCA	60.321	55.000	0.00	0.00	0.00	3.53
93	94	0.320771	ATGAGCCGTGTGACTTCCAC	60.321	55.000	0.00	0.00	45.88	4.02
94	95	1.367840	GAGCCGTGTGACTTCCACT	59.632	57.895	0.00	0.00	45.86	4.00
95	96	0.667792	GAGCCGTGTGACTTCCACTC	60.668	60.000	0.00	0.00	45.86	3.51
106	107	2.747686	TCCACTCGGAAACTGGCC	59.252	61.111	0.00	0.00	38.83	5.36
107	108	2.144078	TCCACTCGGAAACTGGCCA	61.144	57.895	4.71	4.71	38.83	5.36
108	109	1.228124	CCACTCGGAAACTGGCCAA	60.228	57.895	7.01	0.00	0.00	4.52
109	110	0.609131	CCACTCGGAAACTGGCCAAT	60.609	55.000	7.01	0.00	0.00	3.16
110	111	0.804989	CACTCGGAAACTGGCCAATC	59.195	55.000	7.01	5.53	0.00	2.67
111	112	0.673644	ACTCGGAAACTGGCCAATCG	60.674	55.000	7.01	6.70	0.00	3.34
112	113	1.369091	CTCGGAAACTGGCCAATCGG	61.369	60.000	7.01	10.22	0.00	4.18
113	114	1.674322	CGGAAACTGGCCAATCGGT	60.674	57.895	7.01	0.00	33.28	4.69
114	115	1.883021	GGAAACTGGCCAATCGGTG	59.117	57.895	7.01	0.00	33.28	4.94
115	116	1.212751	GAAACTGGCCAATCGGTGC	59.787	57.895	7.01	0.00	33.28	5.01
116	117	1.228552	AAACTGGCCAATCGGTGCT	60.229	52.632	7.01	0.00	33.28	4.40
117	118	1.244019	AAACTGGCCAATCGGTGCTC	61.244	55.000	7.01	0.00	33.28	4.26
118	119	2.129555	AACTGGCCAATCGGTGCTCT	62.130	55.000	7.01	0.00	33.28	4.09
119	120	1.817099	CTGGCCAATCGGTGCTCTC	60.817	63.158	7.01	0.00	33.28	3.20
120	121	2.514824	GGCCAATCGGTGCTCTCC	60.515	66.667	0.00	0.00	33.28	3.71
121	122	2.586792	GCCAATCGGTGCTCTCCT	59.413	61.111	0.00	0.00	33.28	3.69
122	123	1.078143	GCCAATCGGTGCTCTCCTT	60.078	57.895	0.00	0.00	33.28	3.36
123	124	1.372087	GCCAATCGGTGCTCTCCTTG	61.372	60.000	0.00	0.00	33.28	3.61
124	125	0.036010	CCAATCGGTGCTCTCCTTGT	60.036	55.000	0.00	0.00	0.00	3.16
125	126	1.611673	CCAATCGGTGCTCTCCTTGTT	60.612	52.381	0.00	0.00	0.00	2.83
126	127	2.154462	CAATCGGTGCTCTCCTTGTTT	58.846	47.619	0.00	0.00	0.00	2.83
127	128	2.554032	CAATCGGTGCTCTCCTTGTTTT	59.446	45.455	0.00	0.00	0.00	2.43
128	129	2.341846	TCGGTGCTCTCCTTGTTTTT	57.658	45.000	0.00	0.00	0.00	1.94
147	148	4.681074	TTTTGGTGGATTTGGAAGGAAC	57.319	40.909	0.00	0.00	0.00	3.62
148	149	1.904287	TGGTGGATTTGGAAGGAACG	58.096	50.000	0.00	0.00	0.00	3.95
149	150	1.144093	TGGTGGATTTGGAAGGAACGT	59.856	47.619	0.00	0.00	0.00	3.99
150	151	2.372504	TGGTGGATTTGGAAGGAACGTA	59.627	45.455	0.00	0.00	0.00	3.57
151	152	3.181442	TGGTGGATTTGGAAGGAACGTAA	60.181	43.478	0.00	0.00	0.00	3.18
152	153	3.189910	GGTGGATTTGGAAGGAACGTAAC	59.810	47.826	0.00	0.00	0.00	2.50
153	154	3.068560	TGGATTTGGAAGGAACGTAACG	58.931	45.455	0.00	0.00	0.00	3.18
154	155	2.159612	GGATTTGGAAGGAACGTAACGC	60.160	50.000	0.00	0.00	0.00	4.84
155	156	1.950828	TTTGGAAGGAACGTAACGCA	58.049	45.000	0.00	0.00	0.00	5.24
156	157	1.219646	TTGGAAGGAACGTAACGCAC	58.780	50.000	0.00	0.00	0.00	5.34
164	165	4.925786	CGTAACGCACGCATCTTC	57.074	55.556	0.00	0.00	45.03	2.87
165	166	1.014825	CGTAACGCACGCATCTTCG	60.015	57.895	0.00	0.00	45.03	3.79
166	167	1.400246	CGTAACGCACGCATCTTCGA	61.400	55.000	0.00	0.00	45.03	3.71
167	168	0.023354	GTAACGCACGCATCTTCGAC	59.977	55.000	0.00	0.00	0.00	4.20
168	169	1.400246	TAACGCACGCATCTTCGACG	61.400	55.000	0.00	0.00	38.06	5.12
169	170	3.902063	CGCACGCATCTTCGACGG	61.902	66.667	0.00	0.00	0.00	4.79
170	171	4.210304	GCACGCATCTTCGACGGC	62.210	66.667	0.00	0.00	0.00	5.68
175	176	3.554692	CATCTTCGACGGCGGCAC	61.555	66.667	15.54	1.85	38.28	5.01
217	218	3.538614	GCACCTCCTGCTATCGGA	58.461	61.111	0.00	0.00	43.33	4.55
218	219	1.365633	GCACCTCCTGCTATCGGAG	59.634	63.158	0.00	0.00	46.11	4.63
223	224	4.766970	CCTGCTATCGGAGGCAAG	57.233	61.111	9.16	1.22	42.12	4.01
224	225	1.596477	CCTGCTATCGGAGGCAAGC	60.596	63.158	9.16	4.31	42.12	4.01
225	226	1.953138	CTGCTATCGGAGGCAAGCG	60.953	63.158	9.16	0.00	38.02	4.68
226	227	2.355445	CTGCTATCGGAGGCAAGCGA	62.355	60.000	9.16	0.00	38.02	4.93
227	228	1.951631	GCTATCGGAGGCAAGCGAC	60.952	63.158	0.00	0.00	0.00	5.19
228	229	1.736586	CTATCGGAGGCAAGCGACT	59.263	57.895	0.00	0.00	0.00	4.18
229	230	0.596083	CTATCGGAGGCAAGCGACTG	60.596	60.000	0.00	0.00	0.00	3.51
230	231	2.016393	TATCGGAGGCAAGCGACTGG	62.016	60.000	0.00	0.00	0.00	4.00
251	252	3.790437	CTGGCAGGAGGTCGGCAT	61.790	66.667	6.61	0.00	38.33	4.40
252	253	3.746949	CTGGCAGGAGGTCGGCATC	62.747	68.421	6.61	0.00	38.33	3.91
253	254	3.474570	GGCAGGAGGTCGGCATCT	61.475	66.667	0.19	0.00	38.33	2.90
254	255	2.134287	GGCAGGAGGTCGGCATCTA	61.134	63.158	0.19	0.00	38.33	1.98
255	256	1.365633	GCAGGAGGTCGGCATCTAG	59.634	63.158	0.19	0.00	36.56	2.43
256	257	1.365633	CAGGAGGTCGGCATCTAGC	59.634	63.158	0.19	0.00	44.65	3.42
257	258	1.112315	CAGGAGGTCGGCATCTAGCT	61.112	60.000	0.19	0.00	44.79	3.32
258	259	0.825840	AGGAGGTCGGCATCTAGCTC	60.826	60.000	0.19	0.00	44.79	4.09
259	260	0.825840	GGAGGTCGGCATCTAGCTCT	60.826	60.000	0.19	0.00	44.79	4.09
260	261	0.313672	GAGGTCGGCATCTAGCTCTG	59.686	60.000	0.00	0.00	44.79	3.35
261	262	1.300542	GGTCGGCATCTAGCTCTGC	60.301	63.158	7.18	7.18	44.79	4.26
262	263	1.659954	GTCGGCATCTAGCTCTGCG	60.660	63.158	9.06	5.86	44.79	5.18
263	264	1.823899	TCGGCATCTAGCTCTGCGA	60.824	57.895	9.06	7.59	44.79	5.10
264	265	1.371512	CGGCATCTAGCTCTGCGAG	60.372	63.158	9.06	1.80	44.79	5.03
265	266	1.790090	CGGCATCTAGCTCTGCGAGA	61.790	60.000	9.32	4.98	43.61	4.04
266	267	0.039256	GGCATCTAGCTCTGCGAGAG	60.039	60.000	9.32	8.81	42.83	3.20
267	268	0.667993	GCATCTAGCTCTGCGAGAGT	59.332	55.000	12.71	5.02	42.83	3.24
268	269	1.876799	GCATCTAGCTCTGCGAGAGTA	59.123	52.381	12.71	5.67	42.83	2.59
269	270	2.095768	GCATCTAGCTCTGCGAGAGTAG	60.096	54.545	12.71	12.15	42.83	2.57
270	271	1.588674	TCTAGCTCTGCGAGAGTAGC	58.411	55.000	12.71	0.00	44.12	3.58
271	272	0.591170	CTAGCTCTGCGAGAGTAGCC	59.409	60.000	12.71	0.05	44.12	3.93
272	273	0.820074	TAGCTCTGCGAGAGTAGCCC	60.820	60.000	12.71	0.00	44.12	5.19
273	274	2.418910	GCTCTGCGAGAGTAGCCCA	61.419	63.158	12.71	0.00	44.12	5.36
274	275	1.732917	CTCTGCGAGAGTAGCCCAG	59.267	63.158	5.34	0.00	44.04	4.45
275	276	1.733402	CTCTGCGAGAGTAGCCCAGG	61.733	65.000	5.34	0.00	44.04	4.45
276	277	3.438017	CTGCGAGAGTAGCCCAGGC	62.438	68.421	0.00	0.00	36.92	4.85
277	278	4.228567	GCGAGAGTAGCCCAGGCC	62.229	72.222	4.70	0.00	43.17	5.19
278	279	3.905678	CGAGAGTAGCCCAGGCCG	61.906	72.222	4.70	0.00	43.17	6.13
279	280	2.760385	GAGAGTAGCCCAGGCCGT	60.760	66.667	4.70	0.00	43.17	5.68
280	281	2.284699	AGAGTAGCCCAGGCCGTT	60.285	61.111	4.70	0.00	43.17	4.44
281	282	2.187163	GAGTAGCCCAGGCCGTTC	59.813	66.667	4.70	0.00	43.17	3.95
282	283	2.284699	AGTAGCCCAGGCCGTTCT	60.285	61.111	4.70	0.00	43.17	3.01
283	284	2.187163	GTAGCCCAGGCCGTTCTC	59.813	66.667	4.70	0.00	43.17	2.87
284	285	2.038975	TAGCCCAGGCCGTTCTCT	59.961	61.111	4.70	0.00	43.17	3.10
285	286	1.612442	TAGCCCAGGCCGTTCTCTT	60.612	57.895	4.70	0.00	43.17	2.85
286	287	0.324923	TAGCCCAGGCCGTTCTCTTA	60.325	55.000	4.70	0.00	43.17	2.10
287	288	0.983378	AGCCCAGGCCGTTCTCTTAT	60.983	55.000	4.70	0.00	43.17	1.73
288	289	0.107165	GCCCAGGCCGTTCTCTTATT	60.107	55.000	0.00	0.00	34.56	1.40
289	290	1.682087	GCCCAGGCCGTTCTCTTATTT	60.682	52.381	0.00	0.00	34.56	1.40
290	291	2.723273	CCCAGGCCGTTCTCTTATTTT	58.277	47.619	0.00	0.00	0.00	1.82
291	292	2.683362	CCCAGGCCGTTCTCTTATTTTC	59.317	50.000	0.00	0.00	0.00	2.29
292	293	3.610911	CCAGGCCGTTCTCTTATTTTCT	58.389	45.455	0.00	0.00	0.00	2.52
293	294	4.010349	CCAGGCCGTTCTCTTATTTTCTT	58.990	43.478	0.00	0.00	0.00	2.52
294	295	4.459337	CCAGGCCGTTCTCTTATTTTCTTT	59.541	41.667	0.00	0.00	0.00	2.52
295	296	5.048013	CCAGGCCGTTCTCTTATTTTCTTTT	60.048	40.000	0.00	0.00	0.00	2.27
296	297	6.447162	CAGGCCGTTCTCTTATTTTCTTTTT	58.553	36.000	0.00	0.00	0.00	1.94
297	298	6.582672	CAGGCCGTTCTCTTATTTTCTTTTTC	59.417	38.462	0.00	0.00	0.00	2.29
298	299	6.490381	AGGCCGTTCTCTTATTTTCTTTTTCT	59.510	34.615	0.00	0.00	0.00	2.52
299	300	6.802348	GGCCGTTCTCTTATTTTCTTTTTCTC	59.198	38.462	0.00	0.00	0.00	2.87
300	301	7.308649	GGCCGTTCTCTTATTTTCTTTTTCTCT	60.309	37.037	0.00	0.00	0.00	3.10
301	302	8.076781	GCCGTTCTCTTATTTTCTTTTTCTCTT	58.923	33.333	0.00	0.00	0.00	2.85
302	303	9.952188	CCGTTCTCTTATTTTCTTTTTCTCTTT	57.048	29.630	0.00	0.00	0.00	2.52
319	320	9.981114	TTTTCTCTTTTCTTTTCAGTTTCTTGT	57.019	25.926	0.00	0.00	0.00	3.16
320	321	9.981114	TTTCTCTTTTCTTTTCAGTTTCTTGTT	57.019	25.926	0.00	0.00	0.00	2.83
321	322	9.626045	TTCTCTTTTCTTTTCAGTTTCTTGTTC	57.374	29.630	0.00	0.00	0.00	3.18
322	323	8.244113	TCTCTTTTCTTTTCAGTTTCTTGTTCC	58.756	33.333	0.00	0.00	0.00	3.62
323	324	7.027161	TCTTTTCTTTTCAGTTTCTTGTTCCG	58.973	34.615	0.00	0.00	0.00	4.30
324	325	4.287238	TCTTTTCAGTTTCTTGTTCCGC	57.713	40.909	0.00	0.00	0.00	5.54
325	326	3.692101	TCTTTTCAGTTTCTTGTTCCGCA	59.308	39.130	0.00	0.00	0.00	5.69
326	327	4.156922	TCTTTTCAGTTTCTTGTTCCGCAA	59.843	37.500	0.00	0.00	35.50	4.85
334	335	1.900237	CTTGTTCCGCAAGCTAATGC	58.100	50.000	0.00	0.00	46.68	3.56
347	348	0.657840	CTAATGCGTTAGCCTGCACC	59.342	55.000	12.62	0.00	45.07	5.01
348	349	0.251916	TAATGCGTTAGCCTGCACCT	59.748	50.000	0.00	0.00	45.07	4.00
349	350	0.609131	AATGCGTTAGCCTGCACCTT	60.609	50.000	0.00	0.00	45.07	3.50
350	351	1.308069	ATGCGTTAGCCTGCACCTTG	61.308	55.000	0.00	0.00	45.07	3.61
351	352	1.966451	GCGTTAGCCTGCACCTTGT	60.966	57.895	0.00	0.00	37.42	3.16
352	353	0.672401	GCGTTAGCCTGCACCTTGTA	60.672	55.000	0.00	0.00	37.42	2.41
353	354	1.076332	CGTTAGCCTGCACCTTGTAC	58.924	55.000	0.00	0.00	0.00	2.90
354	355	1.337823	CGTTAGCCTGCACCTTGTACT	60.338	52.381	0.00	0.00	0.00	2.73
355	356	2.347731	GTTAGCCTGCACCTTGTACTC	58.652	52.381	0.00	0.00	0.00	2.59
356	357	0.530744	TAGCCTGCACCTTGTACTCG	59.469	55.000	0.00	0.00	0.00	4.18
357	358	1.741770	GCCTGCACCTTGTACTCGG	60.742	63.158	0.00	0.00	0.00	4.63
358	359	1.741770	CCTGCACCTTGTACTCGGC	60.742	63.158	0.00	0.00	0.00	5.54
359	360	1.293498	CTGCACCTTGTACTCGGCT	59.707	57.895	0.00	0.00	0.00	5.52
360	361	0.320771	CTGCACCTTGTACTCGGCTT	60.321	55.000	0.00	0.00	0.00	4.35
361	362	0.107831	TGCACCTTGTACTCGGCTTT	59.892	50.000	0.00	0.00	0.00	3.51
362	363	0.796927	GCACCTTGTACTCGGCTTTC	59.203	55.000	0.00	0.00	0.00	2.62
363	364	1.608283	GCACCTTGTACTCGGCTTTCT	60.608	52.381	0.00	0.00	0.00	2.52
364	365	2.338500	CACCTTGTACTCGGCTTTCTC	58.662	52.381	0.00	0.00	0.00	2.87
365	366	2.028930	CACCTTGTACTCGGCTTTCTCT	60.029	50.000	0.00	0.00	0.00	3.10
366	367	2.231721	ACCTTGTACTCGGCTTTCTCTC	59.768	50.000	0.00	0.00	0.00	3.20
367	368	2.520979	CTTGTACTCGGCTTTCTCTCG	58.479	52.381	0.00	0.00	0.00	4.04
368	369	0.170561	TGTACTCGGCTTTCTCTCGC	59.829	55.000	0.00	0.00	0.00	5.03
369	370	0.862283	GTACTCGGCTTTCTCTCGCG	60.862	60.000	0.00	0.00	0.00	5.87
370	371	1.303799	TACTCGGCTTTCTCTCGCGT	61.304	55.000	5.77	0.00	0.00	6.01
371	372	1.870016	CTCGGCTTTCTCTCGCGTC	60.870	63.158	5.77	0.00	0.00	5.19
372	373	2.881352	CGGCTTTCTCTCGCGTCC	60.881	66.667	5.77	0.00	0.00	4.79
373	374	2.509561	GGCTTTCTCTCGCGTCCC	60.510	66.667	5.77	0.00	0.00	4.46
374	375	2.509561	GCTTTCTCTCGCGTCCCC	60.510	66.667	5.77	0.00	0.00	4.81
375	376	3.007973	GCTTTCTCTCGCGTCCCCT	62.008	63.158	5.77	0.00	0.00	4.79
376	377	1.139947	CTTTCTCTCGCGTCCCCTC	59.860	63.158	5.77	0.00	0.00	4.30
377	378	2.286127	CTTTCTCTCGCGTCCCCTCC	62.286	65.000	5.77	0.00	0.00	4.30
378	379	2.783122	TTTCTCTCGCGTCCCCTCCT	62.783	60.000	5.77	0.00	0.00	3.69
379	380	1.918467	TTCTCTCGCGTCCCCTCCTA	61.918	60.000	5.77	0.00	0.00	2.94
380	381	1.453379	CTCTCGCGTCCCCTCCTAA	60.453	63.158	5.77	0.00	0.00	2.69
381	382	0.824182	CTCTCGCGTCCCCTCCTAAT	60.824	60.000	5.77	0.00	0.00	1.73
382	383	0.822532	TCTCGCGTCCCCTCCTAATC	60.823	60.000	5.77	0.00	0.00	1.75
383	384	1.076559	TCGCGTCCCCTCCTAATCA	60.077	57.895	5.77	0.00	0.00	2.57
384	385	0.685131	TCGCGTCCCCTCCTAATCAA	60.685	55.000	5.77	0.00	0.00	2.57
385	386	0.393077	CGCGTCCCCTCCTAATCAAT	59.607	55.000	0.00	0.00	0.00	2.57
386	387	1.873903	CGCGTCCCCTCCTAATCAATG	60.874	57.143	0.00	0.00	0.00	2.82
387	388	1.416401	GCGTCCCCTCCTAATCAATGA	59.584	52.381	0.00	0.00	0.00	2.57
388	389	2.158813	GCGTCCCCTCCTAATCAATGAA	60.159	50.000	0.00	0.00	0.00	2.57
389	390	3.684413	GCGTCCCCTCCTAATCAATGAAA	60.684	47.826	0.00	0.00	0.00	2.69
390	391	4.718961	CGTCCCCTCCTAATCAATGAAAT	58.281	43.478	0.00	0.00	0.00	2.17
391	392	5.744887	GCGTCCCCTCCTAATCAATGAAATA	60.745	44.000	0.00	0.00	0.00	1.40
392	393	5.701290	CGTCCCCTCCTAATCAATGAAATAC	59.299	44.000	0.00	0.00	0.00	1.89
393	394	6.601332	GTCCCCTCCTAATCAATGAAATACA	58.399	40.000	0.00	0.00	0.00	2.29
394	395	6.486993	GTCCCCTCCTAATCAATGAAATACAC	59.513	42.308	0.00	0.00	0.00	2.90
395	396	6.389869	TCCCCTCCTAATCAATGAAATACACT	59.610	38.462	0.00	0.00	0.00	3.55
396	397	6.712547	CCCCTCCTAATCAATGAAATACACTC	59.287	42.308	0.00	0.00	0.00	3.51
397	398	6.712547	CCCTCCTAATCAATGAAATACACTCC	59.287	42.308	0.00	0.00	0.00	3.85
398	399	7.420680	CCCTCCTAATCAATGAAATACACTCCT	60.421	40.741	0.00	0.00	0.00	3.69
399	400	7.443575	CCTCCTAATCAATGAAATACACTCCTG	59.556	40.741	0.00	0.00	0.00	3.86
400	401	6.767902	TCCTAATCAATGAAATACACTCCTGC	59.232	38.462	0.00	0.00	0.00	4.85
401	402	5.490139	AATCAATGAAATACACTCCTGCG	57.510	39.130	0.00	0.00	0.00	5.18
402	403	3.937814	TCAATGAAATACACTCCTGCGT	58.062	40.909	0.00	0.00	0.00	5.24
403	404	4.323417	TCAATGAAATACACTCCTGCGTT	58.677	39.130	0.00	0.00	0.00	4.84
404	405	4.759693	TCAATGAAATACACTCCTGCGTTT	59.240	37.500	0.00	0.00	0.00	3.60
405	406	5.935206	TCAATGAAATACACTCCTGCGTTTA	59.065	36.000	0.00	0.00	0.00	2.01
406	407	6.597672	TCAATGAAATACACTCCTGCGTTTAT	59.402	34.615	0.00	0.00	0.00	1.40
407	408	7.120579	TCAATGAAATACACTCCTGCGTTTATT	59.879	33.333	0.00	0.00	0.00	1.40
408	409	6.811253	TGAAATACACTCCTGCGTTTATTT	57.189	33.333	0.00	0.00	34.32	1.40
409	410	6.837992	TGAAATACACTCCTGCGTTTATTTC	58.162	36.000	12.26	12.26	41.90	2.17
410	411	6.428465	TGAAATACACTCCTGCGTTTATTTCA	59.572	34.615	15.60	15.60	45.12	2.69
411	412	6.811253	AATACACTCCTGCGTTTATTTCAA	57.189	33.333	0.00	0.00	0.00	2.69
412	413	6.811253	ATACACTCCTGCGTTTATTTCAAA	57.189	33.333	0.00	0.00	0.00	2.69
413	414	5.508200	ACACTCCTGCGTTTATTTCAAAA	57.492	34.783	0.00	0.00	0.00	2.44
414	415	5.897050	ACACTCCTGCGTTTATTTCAAAAA	58.103	33.333	0.00	0.00	0.00	1.94
442	443	8.928844	AAAATGCGTACTATTGTTAATATCGC	57.071	30.769	0.00	0.00	37.82	4.58
443	444	7.646446	AATGCGTACTATTGTTAATATCGCA	57.354	32.000	19.54	19.54	43.80	5.10
444	445	6.684609	TGCGTACTATTGTTAATATCGCAG	57.315	37.500	16.41	0.00	39.86	5.18
445	446	6.210796	TGCGTACTATTGTTAATATCGCAGT	58.789	36.000	16.41	3.43	39.86	4.40
446	447	7.361894	TGCGTACTATTGTTAATATCGCAGTA	58.638	34.615	16.41	2.74	39.86	2.74
447	448	8.024865	TGCGTACTATTGTTAATATCGCAGTAT	58.975	33.333	16.41	0.00	39.86	2.12
448	449	8.311822	GCGTACTATTGTTAATATCGCAGTATG	58.688	37.037	14.51	0.00	37.56	2.39
449	450	9.338291	CGTACTATTGTTAATATCGCAGTATGT	57.662	33.333	0.00	0.00	39.31	2.29
455	456	8.669394	TTGTTAATATCGCAGTATGTATCTCG	57.331	34.615	0.00	0.00	39.31	4.04
456	457	8.036273	TGTTAATATCGCAGTATGTATCTCGA	57.964	34.615	0.00	0.00	39.31	4.04
457	458	8.674607	TGTTAATATCGCAGTATGTATCTCGAT	58.325	33.333	0.00	0.00	39.31	3.59
461	462	6.927294	ATCGCAGTATGTATCTCGATATCA	57.073	37.500	3.12	0.00	39.31	2.15
462	463	6.351327	TCGCAGTATGTATCTCGATATCAG	57.649	41.667	3.12	0.04	39.31	2.90
463	464	5.875359	TCGCAGTATGTATCTCGATATCAGT	59.125	40.000	3.12	0.00	39.31	3.41
464	465	7.039882	TCGCAGTATGTATCTCGATATCAGTA	58.960	38.462	3.12	0.00	39.31	2.74
465	466	7.711339	TCGCAGTATGTATCTCGATATCAGTAT	59.289	37.037	3.12	0.00	39.31	2.12
466	467	7.796197	CGCAGTATGTATCTCGATATCAGTATG	59.204	40.741	3.12	0.00	39.31	2.39
467	468	8.831550	GCAGTATGTATCTCGATATCAGTATGA	58.168	37.037	3.12	0.00	46.32	2.15
484	485	7.851228	TCAGTATGAGAACAGGACATAAATGT	58.149	34.615	0.00	0.00	42.56	2.71
485	486	8.321353	TCAGTATGAGAACAGGACATAAATGTT	58.679	33.333	0.00	0.00	42.56	2.71
486	487	9.599866	CAGTATGAGAACAGGACATAAATGTTA	57.400	33.333	0.00	0.00	39.09	2.41
506	507	8.885494	ATGTTAATTTTGTACATGTTGCTTGT	57.115	26.923	2.30	0.00	31.66	3.16
507	508	8.709386	TGTTAATTTTGTACATGTTGCTTGTT	57.291	26.923	2.30	0.00	0.00	2.83
508	509	8.598924	TGTTAATTTTGTACATGTTGCTTGTTG	58.401	29.630	2.30	0.00	0.00	3.33
509	510	8.812329	GTTAATTTTGTACATGTTGCTTGTTGA	58.188	29.630	2.30	0.00	0.00	3.18
510	511	7.467557	AATTTTGTACATGTTGCTTGTTGAG	57.532	32.000	2.30	0.00	0.00	3.02
511	512	4.566545	TTGTACATGTTGCTTGTTGAGG	57.433	40.909	2.30	0.00	0.00	3.86
512	513	2.293122	TGTACATGTTGCTTGTTGAGGC	59.707	45.455	2.30	0.00	0.00	4.70
513	514	1.401761	ACATGTTGCTTGTTGAGGCA	58.598	45.000	0.00	0.00	36.62	4.75
514	515	1.965643	ACATGTTGCTTGTTGAGGCAT	59.034	42.857	0.00	0.00	38.30	4.40
515	516	2.288579	ACATGTTGCTTGTTGAGGCATG	60.289	45.455	0.00	0.00	38.30	4.06
516	517	0.675083	TGTTGCTTGTTGAGGCATGG	59.325	50.000	0.00	0.00	38.30	3.66
517	518	0.668401	GTTGCTTGTTGAGGCATGGC	60.668	55.000	12.14	12.14	38.30	4.40
518	519	0.828762	TTGCTTGTTGAGGCATGGCT	60.829	50.000	23.58	23.58	38.30	4.75
519	520	1.214589	GCTTGTTGAGGCATGGCTG	59.785	57.895	28.55	12.12	0.00	4.85
520	521	1.888018	CTTGTTGAGGCATGGCTGG	59.112	57.895	28.55	5.63	0.00	4.85
521	522	1.601419	CTTGTTGAGGCATGGCTGGG	61.601	60.000	28.55	5.98	0.00	4.45
522	523	2.757099	GTTGAGGCATGGCTGGGG	60.757	66.667	28.55	0.00	0.00	4.96
523	524	2.940467	TTGAGGCATGGCTGGGGA	60.940	61.111	28.55	6.44	0.00	4.81
524	525	2.318966	TTGAGGCATGGCTGGGGAT	61.319	57.895	28.55	0.18	0.00	3.85
525	526	2.114838	GAGGCATGGCTGGGGATC	59.885	66.667	28.55	7.40	0.00	3.36
526	527	2.697263	AGGCATGGCTGGGGATCA	60.697	61.111	22.69	0.00	0.00	2.92
527	528	2.279743	GGCATGGCTGGGGATCAA	59.720	61.111	12.86	0.00	0.00	2.57
528	529	1.381599	GGCATGGCTGGGGATCAAA	60.382	57.895	12.86	0.00	0.00	2.69
529	530	0.977108	GGCATGGCTGGGGATCAAAA	60.977	55.000	12.86	0.00	0.00	2.44
530	531	0.903942	GCATGGCTGGGGATCAAAAA	59.096	50.000	0.00	0.00	0.00	1.94
531	532	1.405933	GCATGGCTGGGGATCAAAAAC	60.406	52.381	0.00	0.00	0.00	2.43
532	533	1.901159	CATGGCTGGGGATCAAAAACA	59.099	47.619	0.00	0.00	0.00	2.83
533	534	2.323999	TGGCTGGGGATCAAAAACAT	57.676	45.000	0.00	0.00	0.00	2.71
534	535	2.618794	TGGCTGGGGATCAAAAACATT	58.381	42.857	0.00	0.00	0.00	2.71
535	536	3.784178	TGGCTGGGGATCAAAAACATTA	58.216	40.909	0.00	0.00	0.00	1.90
536	537	3.768757	TGGCTGGGGATCAAAAACATTAG	59.231	43.478	0.00	0.00	0.00	1.73
537	538	3.430790	GGCTGGGGATCAAAAACATTAGC	60.431	47.826	0.00	0.00	0.00	3.09
538	539	3.195396	GCTGGGGATCAAAAACATTAGCA	59.805	43.478	0.00	0.00	0.00	3.49
539	540	4.141869	GCTGGGGATCAAAAACATTAGCAT	60.142	41.667	0.00	0.00	0.00	3.79
540	541	5.627503	GCTGGGGATCAAAAACATTAGCATT	60.628	40.000	0.00	0.00	0.00	3.56
541	542	5.732633	TGGGGATCAAAAACATTAGCATTG	58.267	37.500	0.00	0.00	0.00	2.82
542	543	5.483231	TGGGGATCAAAAACATTAGCATTGA	59.517	36.000	0.00	0.00	34.80	2.57
543	544	6.156602	TGGGGATCAAAAACATTAGCATTGAT	59.843	34.615	0.00	0.00	41.89	2.57
546	547	7.385668	GATCAAAAACATTAGCATTGATCCG	57.614	36.000	13.22	0.00	45.28	4.18
547	548	6.507958	TCAAAAACATTAGCATTGATCCGA	57.492	33.333	0.00	0.00	0.00	4.55
548	549	6.918626	TCAAAAACATTAGCATTGATCCGAA	58.081	32.000	0.00	0.00	0.00	4.30
549	550	7.028962	TCAAAAACATTAGCATTGATCCGAAG	58.971	34.615	0.00	0.00	0.00	3.79
568	569	6.867662	CGAAGGAAAATAACCATATGAGCT	57.132	37.500	3.65	0.00	0.00	4.09
569	570	7.264373	CGAAGGAAAATAACCATATGAGCTT	57.736	36.000	3.65	0.00	0.00	3.74
570	571	7.134815	CGAAGGAAAATAACCATATGAGCTTG	58.865	38.462	3.65	0.00	0.00	4.01
571	572	6.966534	AGGAAAATAACCATATGAGCTTGG	57.033	37.500	3.65	0.37	39.02	3.61
572	573	6.672593	AGGAAAATAACCATATGAGCTTGGA	58.327	36.000	9.19	0.00	36.79	3.53
573	574	6.774656	AGGAAAATAACCATATGAGCTTGGAG	59.225	38.462	9.19	0.00	36.79	3.86
574	575	6.396829	AAAATAACCATATGAGCTTGGAGC	57.603	37.500	9.19	0.00	42.84	4.70
587	588	2.572284	GGAGCGCTCCGTAGTGTT	59.428	61.111	38.78	0.00	40.36	3.32
588	589	1.080025	GGAGCGCTCCGTAGTGTTT	60.080	57.895	38.78	0.00	40.36	2.83
589	590	0.669625	GGAGCGCTCCGTAGTGTTTT	60.670	55.000	38.78	0.00	40.36	2.43
590	591	1.145803	GAGCGCTCCGTAGTGTTTTT	58.854	50.000	27.22	0.00	35.56	1.94
591	592	2.331194	GAGCGCTCCGTAGTGTTTTTA	58.669	47.619	27.22	0.00	35.56	1.52
592	593	2.733026	GAGCGCTCCGTAGTGTTTTTAA	59.267	45.455	27.22	0.00	35.56	1.52
593	594	3.132925	AGCGCTCCGTAGTGTTTTTAAA	58.867	40.909	2.64	0.00	35.56	1.52
594	595	3.560896	AGCGCTCCGTAGTGTTTTTAAAA	59.439	39.130	2.64	0.00	35.56	1.52
595	596	4.035441	AGCGCTCCGTAGTGTTTTTAAAAA	59.965	37.500	2.64	9.31	35.56	1.94
627	628	5.841957	AAAATATGGGTGAGATGTGCTTC	57.158	39.130	0.00	0.00	0.00	3.86
628	629	4.785346	AATATGGGTGAGATGTGCTTCT	57.215	40.909	0.00	0.00	0.00	2.85
629	630	2.706339	ATGGGTGAGATGTGCTTCTC	57.294	50.000	7.80	7.80	42.10	2.87
637	638	5.428496	TGAGATGTGCTTCTCAAAAACTG	57.572	39.130	13.22	0.00	46.92	3.16
638	639	5.125356	TGAGATGTGCTTCTCAAAAACTGA	58.875	37.500	13.22	0.00	46.92	3.41
639	640	5.589855	TGAGATGTGCTTCTCAAAAACTGAA	59.410	36.000	13.22	0.00	46.92	3.02
640	641	6.263842	TGAGATGTGCTTCTCAAAAACTGAAT	59.736	34.615	13.22	0.00	46.92	2.57
641	642	6.675987	AGATGTGCTTCTCAAAAACTGAATC	58.324	36.000	0.00	0.00	32.17	2.52
642	643	6.489361	AGATGTGCTTCTCAAAAACTGAATCT	59.511	34.615	0.00	0.00	32.17	2.40
643	644	7.663081	AGATGTGCTTCTCAAAAACTGAATCTA	59.337	33.333	0.00	0.00	32.17	1.98
644	645	7.750229	TGTGCTTCTCAAAAACTGAATCTAT	57.250	32.000	0.00	0.00	32.17	1.98
645	646	7.810658	TGTGCTTCTCAAAAACTGAATCTATC	58.189	34.615	0.00	0.00	32.17	2.08
646	647	7.663081	TGTGCTTCTCAAAAACTGAATCTATCT	59.337	33.333	0.00	0.00	32.17	1.98
647	648	8.510505	GTGCTTCTCAAAAACTGAATCTATCTT	58.489	33.333	0.00	0.00	32.17	2.40
648	649	8.509690	TGCTTCTCAAAAACTGAATCTATCTTG	58.490	33.333	0.00	0.00	32.17	3.02
649	650	8.510505	GCTTCTCAAAAACTGAATCTATCTTGT	58.489	33.333	0.00	0.00	32.17	3.16
650	651	9.823098	CTTCTCAAAAACTGAATCTATCTTGTG	57.177	33.333	0.00	0.00	32.17	3.33
651	652	7.810658	TCTCAAAAACTGAATCTATCTTGTGC	58.189	34.615	0.00	0.00	32.17	4.57
652	653	7.445096	TCTCAAAAACTGAATCTATCTTGTGCA	59.555	33.333	0.00	0.00	32.17	4.57
653	654	7.362662	TCAAAAACTGAATCTATCTTGTGCAC	58.637	34.615	10.75	10.75	0.00	4.57
654	655	5.536554	AAACTGAATCTATCTTGTGCACG	57.463	39.130	13.13	0.00	0.00	5.34
655	656	3.525537	ACTGAATCTATCTTGTGCACGG	58.474	45.455	13.13	7.83	0.00	4.94
656	657	3.195610	ACTGAATCTATCTTGTGCACGGA	59.804	43.478	13.13	13.26	0.00	4.69
657	658	3.785486	TGAATCTATCTTGTGCACGGAG	58.215	45.455	13.13	12.74	0.00	4.63
670	671	2.362242	ACGGAGTGTGTGCTATGGT	58.638	52.632	0.00	0.00	42.51	3.55
671	672	0.037326	ACGGAGTGTGTGCTATGGTG	60.037	55.000	0.00	0.00	42.51	4.17
672	673	0.037326	CGGAGTGTGTGCTATGGTGT	60.037	55.000	0.00	0.00	0.00	4.16
673	674	1.726853	GGAGTGTGTGCTATGGTGTC	58.273	55.000	0.00	0.00	0.00	3.67
674	675	1.350193	GAGTGTGTGCTATGGTGTCG	58.650	55.000	0.00	0.00	0.00	4.35
675	676	0.679505	AGTGTGTGCTATGGTGTCGT	59.320	50.000	0.00	0.00	0.00	4.34
676	677	1.070134	AGTGTGTGCTATGGTGTCGTT	59.930	47.619	0.00	0.00	0.00	3.85
677	678	2.297880	AGTGTGTGCTATGGTGTCGTTA	59.702	45.455	0.00	0.00	0.00	3.18
678	679	3.061322	GTGTGTGCTATGGTGTCGTTAA	58.939	45.455	0.00	0.00	0.00	2.01
679	680	3.495377	GTGTGTGCTATGGTGTCGTTAAA	59.505	43.478	0.00	0.00	0.00	1.52
680	681	3.495377	TGTGTGCTATGGTGTCGTTAAAC	59.505	43.478	0.00	0.00	0.00	2.01
681	682	3.744426	GTGTGCTATGGTGTCGTTAAACT	59.256	43.478	0.00	0.00	0.00	2.66
682	683	4.212636	GTGTGCTATGGTGTCGTTAAACTT	59.787	41.667	0.00	0.00	0.00	2.66
683	684	4.817464	TGTGCTATGGTGTCGTTAAACTTT	59.183	37.500	0.00	0.00	0.00	2.66
684	685	5.990386	TGTGCTATGGTGTCGTTAAACTTTA	59.010	36.000	0.00	0.00	0.00	1.85
685	686	6.482641	TGTGCTATGGTGTCGTTAAACTTTAA	59.517	34.615	0.00	0.00	0.00	1.52
686	687	7.173562	TGTGCTATGGTGTCGTTAAACTTTAAT	59.826	33.333	0.00	0.00	0.00	1.40
687	688	8.019094	GTGCTATGGTGTCGTTAAACTTTAATT	58.981	33.333	0.00	0.00	0.00	1.40
688	689	8.018520	TGCTATGGTGTCGTTAAACTTTAATTG	58.981	33.333	0.00	0.00	0.00	2.32
689	690	7.007995	GCTATGGTGTCGTTAAACTTTAATTGC	59.992	37.037	0.00	0.00	0.00	3.56
690	691	5.521544	TGGTGTCGTTAAACTTTAATTGCC	58.478	37.500	0.00	0.00	0.00	4.52
691	692	5.067413	TGGTGTCGTTAAACTTTAATTGCCA	59.933	36.000	0.00	1.35	0.00	4.92
692	693	5.400188	GGTGTCGTTAAACTTTAATTGCCAC	59.600	40.000	0.00	1.23	0.00	5.01
693	694	5.972382	GTGTCGTTAAACTTTAATTGCCACA	59.028	36.000	0.00	0.00	0.00	4.17
694	695	6.141685	GTGTCGTTAAACTTTAATTGCCACAG	59.858	38.462	0.00	0.00	0.00	3.66
695	696	5.116528	GTCGTTAAACTTTAATTGCCACAGC	59.883	40.000	0.00	0.00	40.48	4.40
704	705	4.905240	TGCCACAGCACTGTTGAT	57.095	50.000	6.08	0.00	46.52	2.57
705	706	2.333291	TGCCACAGCACTGTTGATG	58.667	52.632	6.08	0.00	46.52	3.07
713	714	4.771590	CAGCACTGTTGATGTTTGGTAT	57.228	40.909	0.00	0.00	34.23	2.73
714	715	4.726416	CAGCACTGTTGATGTTTGGTATC	58.274	43.478	0.00	0.00	34.23	2.24
715	716	3.758554	AGCACTGTTGATGTTTGGTATCC	59.241	43.478	0.00	0.00	0.00	2.59
716	717	3.505680	GCACTGTTGATGTTTGGTATCCA	59.494	43.478	0.00	0.00	0.00	3.41
717	718	4.022416	GCACTGTTGATGTTTGGTATCCAA	60.022	41.667	0.00	0.00	42.29	3.53
718	719	5.460646	CACTGTTGATGTTTGGTATCCAAC	58.539	41.667	0.35	0.00	43.82	3.77
719	720	4.215399	ACTGTTGATGTTTGGTATCCAACG	59.785	41.667	0.35	0.00	43.82	4.10
720	721	3.504134	TGTTGATGTTTGGTATCCAACGG	59.496	43.478	0.35	0.00	43.82	4.44
721	722	2.088423	TGATGTTTGGTATCCAACGGC	58.912	47.619	0.35	0.00	43.82	5.68
722	723	1.063469	GATGTTTGGTATCCAACGGCG	59.937	52.381	4.80	4.80	43.82	6.46
723	724	1.135939	GTTTGGTATCCAACGGCGC	59.864	57.895	6.90	0.00	43.82	6.53
724	725	1.302591	TTTGGTATCCAACGGCGCA	60.303	52.632	10.83	0.00	43.82	6.09
725	726	1.302383	TTTGGTATCCAACGGCGCAG	61.302	55.000	10.83	8.25	43.82	5.18
738	739	4.121490	CGCAGCGAAGTTTGCTTC	57.879	55.556	15.29	9.77	45.68	3.86
739	740	1.571460	CGCAGCGAAGTTTGCTTCT	59.429	52.632	15.29	0.00	46.65	2.85
740	741	0.790207	CGCAGCGAAGTTTGCTTCTA	59.210	50.000	15.29	0.00	46.65	2.10
741	742	1.201855	CGCAGCGAAGTTTGCTTCTAG	60.202	52.381	15.29	5.40	46.65	2.43
742	743	1.801178	GCAGCGAAGTTTGCTTCTAGT	59.199	47.619	15.29	0.00	46.65	2.57
743	744	2.993899	GCAGCGAAGTTTGCTTCTAGTA	59.006	45.455	15.29	0.00	46.65	1.82
744	745	3.061429	GCAGCGAAGTTTGCTTCTAGTAG	59.939	47.826	15.29	3.61	46.65	2.57
750	751	6.310711	GCGAAGTTTGCTTCTAGTAGTACAAT	59.689	38.462	7.92	0.00	46.65	2.71
791	792	1.078201	CGAGCTGCGCTTGATACACA	61.078	55.000	9.73	0.00	42.27	3.72
866	883	2.927477	TGTCGATCCGAACTACAAATGC	59.073	45.455	0.00	0.00	37.72	3.56
868	885	2.167693	TCGATCCGAACTACAAATGCCT	59.832	45.455	0.00	0.00	31.06	4.75
893	910	1.478510	CTTCGTGTAGCTCCACTCCAT	59.521	52.381	7.90	0.00	33.07	3.41
917	966	3.394274	CTCCTCCTCTAGTCTCTGATGGA	59.606	52.174	0.00	0.00	0.00	3.41
918	967	3.788708	TCCTCCTCTAGTCTCTGATGGAA	59.211	47.826	0.00	0.00	0.00	3.53
927	976	4.296912	AGTCTCTGATGGAATGATGGAGT	58.703	43.478	0.00	0.00	0.00	3.85
949	998	1.499007	CCTCTTCTCCCTCCTCTAGCT	59.501	57.143	0.00	0.00	0.00	3.32
950	999	2.091333	CCTCTTCTCCCTCCTCTAGCTT	60.091	54.545	0.00	0.00	0.00	3.74
952	1001	2.856231	TCTTCTCCCTCCTCTAGCTTCT	59.144	50.000	0.00	0.00	0.00	2.85
958	1007	2.698274	CCCTCCTCTAGCTTCTTTCTCC	59.302	54.545	0.00	0.00	0.00	3.71
971	1020	4.804420	TCTCCGCCTCCCCTGCAT	62.804	66.667	0.00	0.00	0.00	3.96
974	1023	4.864334	CCGCCTCCCCTGCATCAC	62.864	72.222	0.00	0.00	0.00	3.06
997	1052	2.815298	GCGGAGTCCTCGAGAGTCG	61.815	68.421	15.71	11.08	44.75	4.18
1005	1060	4.637771	TCGAGAGTCGAGATGGCA	57.362	55.556	0.00	0.00	44.82	4.92
1039	1095	1.541672	CTCCTCCTCCTCCTCCTCC	59.458	68.421	0.00	0.00	0.00	4.30
1042	1098	1.541672	CTCCTCCTCCTCCTCCTCC	59.458	68.421	0.00	0.00	0.00	4.30
1043	1099	0.998945	CTCCTCCTCCTCCTCCTCCT	60.999	65.000	0.00	0.00	0.00	3.69
1044	1100	0.996762	TCCTCCTCCTCCTCCTCCTC	60.997	65.000	0.00	0.00	0.00	3.71
1045	1101	1.541672	CTCCTCCTCCTCCTCCTCC	59.458	68.421	0.00	0.00	0.00	4.30
1060	1116	1.309347	CTCCTCCTCTGCTCCCTCA	59.691	63.158	0.00	0.00	0.00	3.86
1064	1120	0.690411	CTCCTCTGCTCCCTCACCAT	60.690	60.000	0.00	0.00	0.00	3.55
1068	1124	1.153489	CTGCTCCCTCACCATCACG	60.153	63.158	0.00	0.00	0.00	4.35
1073	1129	4.082523	CCTCACCATCACGCCGGT	62.083	66.667	1.90	0.00	35.27	5.28
1440	1496	2.203070	GGCGAGGGCGTCATCATT	60.203	61.111	1.43	0.00	42.82	2.57
1449	1505	1.061411	CGTCATCATTGGCGTGCTG	59.939	57.895	0.00	0.00	45.71	4.41
1475	1531	2.668212	CGTTTGGCCCGAGAGCAA	60.668	61.111	0.00	0.00	0.00	3.91
1567	1623	2.744318	CCGCCACCACGTGCAATA	60.744	61.111	10.91	0.00	31.34	1.90
1599	1655	1.956620	GAGCACGCTACTTCAACCGC	61.957	60.000	0.00	0.00	0.00	5.68
1602	1658	2.126228	CGCTACTTCAACCGCGGA	60.126	61.111	35.90	6.51	41.72	5.54
1625	1681	3.138128	GGCCATGTACCCCAACGC	61.138	66.667	0.00	0.00	0.00	4.84
1630	1686	3.615509	ATGTACCCCAACGCCACCG	62.616	63.158	0.00	0.00	41.14	4.94
1796	1852	1.841302	TACAAGGTCAGCTGGCCCAG	61.841	60.000	33.50	26.79	41.83	4.45
1824	1880	4.129737	ATGTCCGACGTCCTGGCG	62.130	66.667	10.58	8.60	37.94	5.69
1843	1899	4.889856	CCATGGACGCGGCGATCA	62.890	66.667	30.94	24.24	0.00	2.92
1875	1931	1.067821	GATGTCGTGTCCATCTCCCTC	59.932	57.143	0.00	0.00	36.59	4.30
1878	1934	2.501610	GTGTCCATCTCCCTCGGC	59.498	66.667	0.00	0.00	0.00	5.54
1888	1944	0.955919	CTCCCTCGGCTTCAACAACC	60.956	60.000	0.00	0.00	0.00	3.77
1948	2004	4.923942	CCATGGAGCGCGGCATCT	62.924	66.667	5.56	0.00	0.00	2.90
1956	2012	2.507102	CGCGGCATCTTCGTGTCT	60.507	61.111	0.00	0.00	33.99	3.41
2067	2123	2.953821	CAAATGTTCGCCGGCACT	59.046	55.556	28.98	5.19	0.00	4.40
2072	2128	3.414700	GTTCGCCGGCACTGTGAG	61.415	66.667	28.98	8.23	32.93	3.51
2103	2159	1.503542	GAAGCAAGGCATCACCACG	59.496	57.895	0.00	0.00	43.14	4.94
2120	2176	1.153823	CGATCACTGGGGTCACGTC	60.154	63.158	0.00	0.00	0.00	4.34
2150	2206	3.493176	GCAAATGCTTGGGTTTCTCAAGT	60.493	43.478	10.43	0.00	42.44	3.16
2169	2225	2.029828	AGTGAAGCTGGTCTACAACGAG	60.030	50.000	0.00	0.00	36.83	4.18
2202	2258	1.153862	CACCTCGTCAGCTCTGCTC	60.154	63.158	0.00	0.00	36.40	4.26
2278	2334	2.763933	CGATGGACCATCAGATGAAGG	58.236	52.381	29.58	10.58	40.54	3.46
2282	2338	2.644299	TGGACCATCAGATGAAGGTTGT	59.356	45.455	12.41	0.00	45.13	3.32
2343	2399	2.759783	CGAGACGGACGAACCTCTA	58.240	57.895	0.00	0.00	36.31	2.43
2356	2412	4.715297	ACGAACCTCTAATGGGTGAGTATT	59.285	41.667	0.00	0.00	37.13	1.89
2574	2630	2.584236	CCGGGTGACAGTATACTAGCT	58.416	52.381	4.74	0.00	0.00	3.32
2577	2633	3.004524	CGGGTGACAGTATACTAGCTTCC	59.995	52.174	4.74	4.62	0.00	3.46
2589	2645	4.660938	GCTTCCTGGCCACCCGTT	62.661	66.667	0.00	0.00	0.00	4.44
2611	2667	2.568090	CGTTGGCGTACGTAGGGT	59.432	61.111	17.90	0.00	36.80	4.34
2612	2668	1.514873	CGTTGGCGTACGTAGGGTC	60.515	63.158	17.90	4.45	36.80	4.46
2774	2830	2.809174	CGCGGTCGACAATCTGCA	60.809	61.111	18.91	0.00	38.10	4.41
2785	2841	1.153369	AATCTGCACCGTCCCATCG	60.153	57.895	0.00	0.00	0.00	3.84
2817	2891	2.438434	GGCAACGGCATGGCTAGT	60.438	61.111	18.09	5.81	43.71	2.57
2913	2987	2.876645	GACTTCGTCGCGCTCCTG	60.877	66.667	5.56	0.00	0.00	3.86
3269	3359	2.888863	CTCTGGACGGAGCTGGTC	59.111	66.667	0.00	0.00	0.00	4.02
3270	3360	3.057547	CTCTGGACGGAGCTGGTCG	62.058	68.421	0.00	0.00	35.24	4.79
3271	3361	4.135153	CTGGACGGAGCTGGTCGG	62.135	72.222	12.12	12.12	35.24	4.79
3293	3383	1.294780	CAGTCACCAGGTCAGGCTC	59.705	63.158	0.00	0.00	0.00	4.70
3398	3489	8.211629	GGCTTAAGGAGTCAGAAATCCTATTAA	58.788	37.037	4.29	2.74	45.39	1.40
3399	3490	9.267084	GCTTAAGGAGTCAGAAATCCTATTAAG	57.733	37.037	4.29	14.07	45.39	1.85
3404	3495	9.138596	AGGAGTCAGAAATCCTATTAAGTACTC	57.861	37.037	0.00	0.00	44.28	2.59
3405	3496	9.138596	GGAGTCAGAAATCCTATTAAGTACTCT	57.861	37.037	0.00	0.00	32.51	3.24
3492	3583	3.664107	TCCTACTAGTTGCTTGTGCTTG	58.336	45.455	0.00	0.00	40.48	4.01
3536	3628	4.201822	GCTTGTGCTTATTAGTTCCTTCGG	60.202	45.833	0.00	0.00	36.03	4.30
3540	3632	6.646267	TGTGCTTATTAGTTCCTTCGGTTAT	58.354	36.000	0.00	0.00	0.00	1.89
3557	3649	6.403049	TCGGTTATCTTTTGTGCTCTTCATA	58.597	36.000	0.00	0.00	0.00	2.15
3558	3650	6.876789	TCGGTTATCTTTTGTGCTCTTCATAA	59.123	34.615	0.00	0.00	0.00	1.90
3561	3653	9.294030	GGTTATCTTTTGTGCTCTTCATAATTG	57.706	33.333	0.00	0.00	0.00	2.32
3567	3661	9.252962	CTTTTGTGCTCTTCATAATTGTTCTTT	57.747	29.630	0.00	0.00	0.00	2.52
3582	3676	8.437360	AATTGTTCTTTCTTTTCCATTGAACC	57.563	30.769	0.00	0.00	33.57	3.62
3584	3678	5.358442	TGTTCTTTCTTTTCCATTGAACCGA	59.642	36.000	0.00	0.00	33.57	4.69
3616	3710	2.665519	GCGACATGTGTTGACCATTGTC	60.666	50.000	1.15	0.00	42.12	3.18
3620	3714	5.122239	CGACATGTGTTGACCATTGTCTATT	59.878	40.000	1.15	0.00	42.28	1.73
3624	3718	4.518590	TGTGTTGACCATTGTCTATTGGTG	59.481	41.667	0.00	0.00	46.14	4.17
3626	3720	5.415701	GTGTTGACCATTGTCTATTGGTGAT	59.584	40.000	0.00	0.00	46.14	3.06
3642	3736	1.559682	GTGATTTGGTGAGCCCCTAGA	59.440	52.381	0.00	0.00	0.00	2.43
3643	3737	1.839994	TGATTTGGTGAGCCCCTAGAG	59.160	52.381	0.00	0.00	0.00	2.43
3644	3738	1.141858	GATTTGGTGAGCCCCTAGAGG	59.858	57.143	0.00	0.00	0.00	3.69
3654	3748	4.798682	CCTAGAGGGCCCGGGTGT	62.799	72.222	24.63	6.74	0.00	4.16
3655	3749	2.281091	CTAGAGGGCCCGGGTGTA	59.719	66.667	24.63	4.12	0.00	2.90
3656	3750	1.382146	CTAGAGGGCCCGGGTGTAA	60.382	63.158	24.63	2.09	0.00	2.41
3657	3751	1.382146	TAGAGGGCCCGGGTGTAAG	60.382	63.158	24.63	0.00	0.00	2.34
3658	3752	4.484872	GAGGGCCCGGGTGTAAGC	62.485	72.222	24.63	5.87	0.00	3.09
3671	3765	3.744660	GGTGTAAGCCATAATGCTAGCT	58.255	45.455	17.23	0.00	41.80	3.32
3672	3766	4.894784	GGTGTAAGCCATAATGCTAGCTA	58.105	43.478	17.23	0.60	41.80	3.32
3678	3772	5.398603	AGCCATAATGCTAGCTAGTGTAG	57.601	43.478	21.62	7.65	40.56	2.74
3694	3788	2.749621	GTGTAGGCCAAACTGAATCCTG	59.250	50.000	5.01	0.00	0.00	3.86
3750	3850	4.601019	AGTTCAAGTTTTCGAGCATTGTG	58.399	39.130	0.00	0.00	0.00	3.33
3815	3915	3.963428	ATGGTTGTAGAAGAGCTCGTT	57.037	42.857	8.37	2.98	0.00	3.85
3931	4043	2.403252	AAAACGATGGTAGCCCTCAG	57.597	50.000	0.00	0.00	0.00	3.35
3938	4050	1.861982	TGGTAGCCCTCAGGTTAGAC	58.138	55.000	0.00	0.00	34.57	2.59
3984	4104	4.125703	ACTCACAGCAACAAAGAAGAGAG	58.874	43.478	0.00	0.00	0.00	3.20
3993	4113	2.224646	ACAAAGAAGAGAGGAACCAGGC	60.225	50.000	0.00	0.00	0.00	4.85
4024	4144	0.179200	CGTAAATTGCGGCAGTGGAC	60.179	55.000	1.67	1.50	0.00	4.02
4050	4170	6.069994	TGCATATCCTGATTTGAGGCATTAA	58.930	36.000	2.32	0.00	32.51	1.40
4070	4190	9.132521	GCATTAAGTAATGGCATTTATGATGTC	57.867	33.333	19.21	9.39	42.46	3.06
4075	4195	7.810658	AGTAATGGCATTTATGATGTCGATTC	58.189	34.615	19.21	0.00	0.00	2.52
4077	4197	7.984422	AATGGCATTTATGATGTCGATTCTA	57.016	32.000	6.96	0.00	0.00	2.10
4105	4225	3.248602	GGAAAGATAAGGCGCATGTACTG	59.751	47.826	10.83	0.00	0.00	2.74

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	1.269448	GCTCCAGGATTGCGAAACAAA	59.731	47.619	0.00	0.00	42.86	2.83
1	2	0.881118	GCTCCAGGATTGCGAAACAA	59.119	50.000	0.00	0.00	44.01	2.83
2	3	0.036732	AGCTCCAGGATTGCGAAACA	59.963	50.000	0.00	0.00	0.00	2.83
3	4	2.024176	TAGCTCCAGGATTGCGAAAC	57.976	50.000	0.00	0.00	0.00	2.78
4	5	2.747446	GTTTAGCTCCAGGATTGCGAAA	59.253	45.455	5.24	5.24	0.00	3.46
5	6	2.356135	GTTTAGCTCCAGGATTGCGAA	58.644	47.619	0.00	0.00	0.00	4.70
6	7	1.406887	GGTTTAGCTCCAGGATTGCGA	60.407	52.381	0.00	0.00	0.00	5.10
7	8	1.017387	GGTTTAGCTCCAGGATTGCG	58.983	55.000	0.00	0.00	0.00	4.85
8	9	1.064389	AGGGTTTAGCTCCAGGATTGC	60.064	52.381	0.00	0.00	0.00	3.56
9	10	2.648059	CAGGGTTTAGCTCCAGGATTG	58.352	52.381	0.00	0.00	0.00	2.67
10	11	1.566231	CCAGGGTTTAGCTCCAGGATT	59.434	52.381	0.00	0.00	0.00	3.01
11	12	1.216990	CCAGGGTTTAGCTCCAGGAT	58.783	55.000	0.00	0.00	0.00	3.24
12	13	1.562672	GCCAGGGTTTAGCTCCAGGA	61.563	60.000	4.93	0.00	0.00	3.86
13	14	1.077429	GCCAGGGTTTAGCTCCAGG	60.077	63.158	0.00	0.00	0.00	4.45
14	15	1.450312	CGCCAGGGTTTAGCTCCAG	60.450	63.158	0.00	0.00	0.00	3.86
15	16	2.668632	CGCCAGGGTTTAGCTCCA	59.331	61.111	0.00	0.00	0.00	3.86
16	17	2.824489	GCGCCAGGGTTTAGCTCC	60.824	66.667	0.00	0.00	0.00	4.70
17	18	1.452108	ATGCGCCAGGGTTTAGCTC	60.452	57.895	4.18	0.00	0.00	4.09
18	19	1.750399	CATGCGCCAGGGTTTAGCT	60.750	57.895	4.18	0.00	0.00	3.32
19	20	2.774799	CCATGCGCCAGGGTTTAGC	61.775	63.158	4.18	0.00	29.93	3.09
20	21	1.077787	TCCATGCGCCAGGGTTTAG	60.078	57.895	14.36	0.00	36.61	1.85
21	22	1.377987	GTCCATGCGCCAGGGTTTA	60.378	57.895	14.36	0.00	36.61	2.01
22	23	2.676471	GTCCATGCGCCAGGGTTT	60.676	61.111	14.36	0.00	36.61	3.27
49	50	3.017581	ATCCAGTCCACCCAGGGC	61.018	66.667	4.91	0.00	44.66	5.19
50	51	1.616327	TGATCCAGTCCACCCAGGG	60.616	63.158	2.85	2.85	38.24	4.45
51	52	1.910722	CTGATCCAGTCCACCCAGG	59.089	63.158	0.00	0.00	39.47	4.45
52	53	1.222936	GCTGATCCAGTCCACCCAG	59.777	63.158	0.00	0.00	33.43	4.45
53	54	1.133181	TTGCTGATCCAGTCCACCCA	61.133	55.000	0.00	0.00	33.43	4.51
54	55	0.678048	GTTGCTGATCCAGTCCACCC	60.678	60.000	0.00	0.00	33.43	4.61
55	56	0.036732	TGTTGCTGATCCAGTCCACC	59.963	55.000	0.00	0.00	33.43	4.61
56	57	1.741706	CATGTTGCTGATCCAGTCCAC	59.258	52.381	0.00	0.00	33.43	4.02
57	58	1.629861	TCATGTTGCTGATCCAGTCCA	59.370	47.619	0.00	0.00	33.43	4.02
58	59	2.286872	CTCATGTTGCTGATCCAGTCC	58.713	52.381	0.00	0.00	33.43	3.85
59	60	1.669779	GCTCATGTTGCTGATCCAGTC	59.330	52.381	6.28	0.00	33.43	3.51
60	61	1.681166	GGCTCATGTTGCTGATCCAGT	60.681	52.381	11.76	0.00	32.76	4.00
61	62	1.022735	GGCTCATGTTGCTGATCCAG	58.977	55.000	11.76	0.00	32.76	3.86
62	63	0.745486	CGGCTCATGTTGCTGATCCA	60.745	55.000	14.13	0.00	38.99	3.41
63	64	0.745845	ACGGCTCATGTTGCTGATCC	60.746	55.000	22.23	0.00	39.85	3.36
64	65	0.376152	CACGGCTCATGTTGCTGATC	59.624	55.000	22.23	0.00	39.85	2.92
65	66	0.321919	ACACGGCTCATGTTGCTGAT	60.322	50.000	22.23	11.31	39.85	2.90
66	67	1.071299	ACACGGCTCATGTTGCTGA	59.929	52.632	22.23	0.00	39.85	4.26
67	68	1.208358	CACACGGCTCATGTTGCTG	59.792	57.895	16.57	16.57	42.11	4.41
68	69	1.071299	TCACACGGCTCATGTTGCT	59.929	52.632	11.76	0.00	0.00	3.91
69	70	1.207593	GTCACACGGCTCATGTTGC	59.792	57.895	0.00	0.00	0.00	4.17
70	71	1.195448	GAAGTCACACGGCTCATGTTG	59.805	52.381	0.00	0.00	0.00	3.33
71	72	1.512926	GAAGTCACACGGCTCATGTT	58.487	50.000	0.00	0.00	0.00	2.71
72	73	0.320771	GGAAGTCACACGGCTCATGT	60.321	55.000	0.00	0.00	0.00	3.21
73	74	0.320683	TGGAAGTCACACGGCTCATG	60.321	55.000	0.00	0.00	0.00	3.07
74	75	0.320771	GTGGAAGTCACACGGCTCAT	60.321	55.000	0.00	0.00	45.39	2.90
75	76	1.069090	GTGGAAGTCACACGGCTCA	59.931	57.895	0.00	0.00	45.39	4.26
76	77	3.952811	GTGGAAGTCACACGGCTC	58.047	61.111	0.00	0.00	45.39	4.70
91	92	0.804989	GATTGGCCAGTTTCCGAGTG	59.195	55.000	5.11	0.00	0.00	3.51
92	93	0.673644	CGATTGGCCAGTTTCCGAGT	60.674	55.000	5.11	0.00	0.00	4.18
93	94	1.369091	CCGATTGGCCAGTTTCCGAG	61.369	60.000	5.11	0.00	0.00	4.63
94	95	1.376683	CCGATTGGCCAGTTTCCGA	60.377	57.895	5.11	0.00	0.00	4.55
95	96	1.674322	ACCGATTGGCCAGTTTCCG	60.674	57.895	5.11	2.84	39.70	4.30
96	97	1.883021	CACCGATTGGCCAGTTTCC	59.117	57.895	5.11	0.00	39.70	3.13
97	98	1.212751	GCACCGATTGGCCAGTTTC	59.787	57.895	5.11	3.82	39.70	2.78
98	99	1.228552	AGCACCGATTGGCCAGTTT	60.229	52.632	5.11	0.00	39.70	2.66
99	100	1.675641	GAGCACCGATTGGCCAGTT	60.676	57.895	5.11	0.00	39.70	3.16
100	101	2.045926	GAGCACCGATTGGCCAGT	60.046	61.111	5.11	1.42	39.70	4.00
101	102	1.817099	GAGAGCACCGATTGGCCAG	60.817	63.158	5.11	0.00	39.70	4.85
102	103	2.268920	GAGAGCACCGATTGGCCA	59.731	61.111	0.00	0.00	39.70	5.36
103	104	2.514824	GGAGAGCACCGATTGGCC	60.515	66.667	0.00	0.00	39.70	5.36
104	105	1.078143	AAGGAGAGCACCGATTGGC	60.078	57.895	0.00	0.00	39.70	4.52
105	106	0.036010	ACAAGGAGAGCACCGATTGG	60.036	55.000	0.00	0.00	42.84	3.16
106	107	1.813513	AACAAGGAGAGCACCGATTG	58.186	50.000	0.00	0.00	34.73	2.67
107	108	2.568623	AAACAAGGAGAGCACCGATT	57.431	45.000	0.00	0.00	34.73	3.34
108	109	2.568623	AAAACAAGGAGAGCACCGAT	57.431	45.000	0.00	0.00	34.73	4.18
109	110	2.341846	AAAAACAAGGAGAGCACCGA	57.658	45.000	0.00	0.00	34.73	4.69
125	126	4.442192	CGTTCCTTCCAAATCCACCAAAAA	60.442	41.667	0.00	0.00	0.00	1.94
126	127	3.068873	CGTTCCTTCCAAATCCACCAAAA	59.931	43.478	0.00	0.00	0.00	2.44
127	128	2.625790	CGTTCCTTCCAAATCCACCAAA	59.374	45.455	0.00	0.00	0.00	3.28
128	129	2.235016	CGTTCCTTCCAAATCCACCAA	58.765	47.619	0.00	0.00	0.00	3.67
129	130	1.144093	ACGTTCCTTCCAAATCCACCA	59.856	47.619	0.00	0.00	0.00	4.17
130	131	1.905637	ACGTTCCTTCCAAATCCACC	58.094	50.000	0.00	0.00	0.00	4.61
131	132	3.120442	CGTTACGTTCCTTCCAAATCCAC	60.120	47.826	0.00	0.00	0.00	4.02
132	133	3.068560	CGTTACGTTCCTTCCAAATCCA	58.931	45.455	0.00	0.00	0.00	3.41
133	134	2.159612	GCGTTACGTTCCTTCCAAATCC	60.160	50.000	6.63	0.00	0.00	3.01
134	135	2.481185	TGCGTTACGTTCCTTCCAAATC	59.519	45.455	6.63	0.00	0.00	2.17
135	136	2.224784	GTGCGTTACGTTCCTTCCAAAT	59.775	45.455	6.63	0.00	0.00	2.32
136	137	1.598601	GTGCGTTACGTTCCTTCCAAA	59.401	47.619	6.63	0.00	0.00	3.28
137	138	1.219646	GTGCGTTACGTTCCTTCCAA	58.780	50.000	6.63	0.00	0.00	3.53
138	139	2.903284	GTGCGTTACGTTCCTTCCA	58.097	52.632	6.63	0.00	0.00	3.53
148	149	0.023354	GTCGAAGATGCGTGCGTTAC	59.977	55.000	0.00	0.00	40.67	2.50
149	150	1.400246	CGTCGAAGATGCGTGCGTTA	61.400	55.000	0.00	0.00	40.67	3.18
150	151	2.716828	CGTCGAAGATGCGTGCGTT	61.717	57.895	0.00	0.00	40.67	4.84
151	152	3.172575	CGTCGAAGATGCGTGCGT	61.173	61.111	0.00	0.00	40.67	5.24
152	153	3.902063	CCGTCGAAGATGCGTGCG	61.902	66.667	0.00	0.00	43.31	5.34
153	154	4.210304	GCCGTCGAAGATGCGTGC	62.210	66.667	0.00	0.00	43.31	5.34
158	159	3.554692	GTGCCGCCGTCGAAGATG	61.555	66.667	0.00	0.00	44.47	2.90
205	206	2.032860	GCTTGCCTCCGATAGCAGGA	62.033	60.000	6.80	0.00	40.73	3.86
206	207	1.596477	GCTTGCCTCCGATAGCAGG	60.596	63.158	0.00	0.00	40.73	4.85
207	208	1.953138	CGCTTGCCTCCGATAGCAG	60.953	63.158	0.00	0.00	40.73	4.24
208	209	2.106938	CGCTTGCCTCCGATAGCA	59.893	61.111	0.00	0.00	37.18	3.49
209	210	1.951631	GTCGCTTGCCTCCGATAGC	60.952	63.158	0.00	0.00	35.76	2.97
210	211	0.596083	CAGTCGCTTGCCTCCGATAG	60.596	60.000	0.00	0.00	35.76	2.08
211	212	1.437573	CAGTCGCTTGCCTCCGATA	59.562	57.895	0.00	0.00	35.76	2.92
212	213	2.185350	CAGTCGCTTGCCTCCGAT	59.815	61.111	0.00	0.00	35.76	4.18
213	214	4.069232	CCAGTCGCTTGCCTCCGA	62.069	66.667	0.00	0.00	0.00	4.55
234	235	3.746949	GATGCCGACCTCCTGCCAG	62.747	68.421	0.00	0.00	0.00	4.85
235	236	2.871795	TAGATGCCGACCTCCTGCCA	62.872	60.000	0.00	0.00	0.00	4.92
236	237	2.093537	CTAGATGCCGACCTCCTGCC	62.094	65.000	0.00	0.00	0.00	4.85
237	238	1.365633	CTAGATGCCGACCTCCTGC	59.634	63.158	0.00	0.00	0.00	4.85
238	239	1.112315	AGCTAGATGCCGACCTCCTG	61.112	60.000	0.00	0.00	44.23	3.86
239	240	0.825840	GAGCTAGATGCCGACCTCCT	60.826	60.000	0.00	0.00	44.23	3.69
240	241	0.825840	AGAGCTAGATGCCGACCTCC	60.826	60.000	0.00	0.00	44.23	4.30
241	242	0.313672	CAGAGCTAGATGCCGACCTC	59.686	60.000	0.00	0.00	44.23	3.85
242	243	1.743321	GCAGAGCTAGATGCCGACCT	61.743	60.000	6.75	0.00	44.23	3.85
243	244	1.300542	GCAGAGCTAGATGCCGACC	60.301	63.158	6.75	0.00	44.23	4.79
244	245	1.659954	CGCAGAGCTAGATGCCGAC	60.660	63.158	11.29	0.00	44.23	4.79
245	246	1.823899	TCGCAGAGCTAGATGCCGA	60.824	57.895	11.29	9.35	44.23	5.54
246	247	2.724377	TCGCAGAGCTAGATGCCG	59.276	61.111	11.29	7.61	44.23	5.69
257	258	1.754621	CCTGGGCTACTCTCGCAGA	60.755	63.158	8.35	0.00	44.29	4.26
258	259	2.811101	CCTGGGCTACTCTCGCAG	59.189	66.667	0.00	0.00	42.13	5.18
259	260	3.461773	GCCTGGGCTACTCTCGCA	61.462	66.667	4.12	0.00	38.26	5.10
260	261	4.228567	GGCCTGGGCTACTCTCGC	62.229	72.222	13.80	0.00	41.60	5.03
261	262	3.905678	CGGCCTGGGCTACTCTCG	61.906	72.222	18.81	1.70	41.60	4.04
262	263	2.299503	GAACGGCCTGGGCTACTCTC	62.300	65.000	18.81	3.75	41.60	3.20
263	264	2.284699	AACGGCCTGGGCTACTCT	60.285	61.111	18.81	0.00	41.60	3.24
264	265	2.187163	GAACGGCCTGGGCTACTC	59.813	66.667	18.81	7.89	41.60	2.59
265	266	2.284699	AGAACGGCCTGGGCTACT	60.285	61.111	18.81	11.15	41.60	2.57
266	267	1.900545	AAGAGAACGGCCTGGGCTAC	61.901	60.000	18.81	9.09	41.60	3.58
267	268	0.324923	TAAGAGAACGGCCTGGGCTA	60.325	55.000	18.81	0.00	41.60	3.93
268	269	0.983378	ATAAGAGAACGGCCTGGGCT	60.983	55.000	18.81	0.00	41.60	5.19
269	270	0.107165	AATAAGAGAACGGCCTGGGC	60.107	55.000	10.75	10.75	41.06	5.36
270	271	2.420058	AAATAAGAGAACGGCCTGGG	57.580	50.000	0.00	0.00	0.00	4.45
271	272	3.610911	AGAAAATAAGAGAACGGCCTGG	58.389	45.455	0.00	0.00	0.00	4.45
272	273	5.629079	AAAGAAAATAAGAGAACGGCCTG	57.371	39.130	0.00	0.00	0.00	4.85
273	274	6.490381	AGAAAAAGAAAATAAGAGAACGGCCT	59.510	34.615	0.00	0.00	0.00	5.19
274	275	6.678878	AGAAAAAGAAAATAAGAGAACGGCC	58.321	36.000	0.00	0.00	0.00	6.13
275	276	7.585867	AGAGAAAAAGAAAATAAGAGAACGGC	58.414	34.615	0.00	0.00	0.00	5.68
276	277	9.952188	AAAGAGAAAAAGAAAATAAGAGAACGG	57.048	29.630	0.00	0.00	0.00	4.44
293	294	9.981114	ACAAGAAACTGAAAAGAAAAGAGAAAA	57.019	25.926	0.00	0.00	0.00	2.29
294	295	9.981114	AACAAGAAACTGAAAAGAAAAGAGAAA	57.019	25.926	0.00	0.00	0.00	2.52
295	296	9.626045	GAACAAGAAACTGAAAAGAAAAGAGAA	57.374	29.630	0.00	0.00	0.00	2.87
296	297	8.244113	GGAACAAGAAACTGAAAAGAAAAGAGA	58.756	33.333	0.00	0.00	0.00	3.10
297	298	7.218963	CGGAACAAGAAACTGAAAAGAAAAGAG	59.781	37.037	0.00	0.00	0.00	2.85
298	299	7.027161	CGGAACAAGAAACTGAAAAGAAAAGA	58.973	34.615	0.00	0.00	0.00	2.52
299	300	6.237569	GCGGAACAAGAAACTGAAAAGAAAAG	60.238	38.462	0.00	0.00	0.00	2.27
300	301	5.575218	GCGGAACAAGAAACTGAAAAGAAAA	59.425	36.000	0.00	0.00	0.00	2.29
301	302	5.099575	GCGGAACAAGAAACTGAAAAGAAA	58.900	37.500	0.00	0.00	0.00	2.52
302	303	4.156922	TGCGGAACAAGAAACTGAAAAGAA	59.843	37.500	0.00	0.00	0.00	2.52
303	304	3.692101	TGCGGAACAAGAAACTGAAAAGA	59.308	39.130	0.00	0.00	0.00	2.52
304	305	4.027572	TGCGGAACAAGAAACTGAAAAG	57.972	40.909	0.00	0.00	0.00	2.27
305	306	4.442375	TTGCGGAACAAGAAACTGAAAA	57.558	36.364	0.00	0.00	33.24	2.29
328	329	0.657840	GGTGCAGGCTAACGCATTAG	59.342	55.000	1.06	0.00	40.89	1.73
329	330	0.251916	AGGTGCAGGCTAACGCATTA	59.748	50.000	1.06	0.00	40.89	1.90
330	331	0.609131	AAGGTGCAGGCTAACGCATT	60.609	50.000	1.06	0.00	40.89	3.56
331	332	1.002134	AAGGTGCAGGCTAACGCAT	60.002	52.632	1.06	0.00	40.89	4.73
332	333	1.965930	CAAGGTGCAGGCTAACGCA	60.966	57.895	0.00	0.00	38.10	5.24
333	334	0.672401	TACAAGGTGCAGGCTAACGC	60.672	55.000	0.00	0.00	0.00	4.84
334	335	1.076332	GTACAAGGTGCAGGCTAACG	58.924	55.000	0.00	0.00	0.00	3.18
335	336	2.347731	GAGTACAAGGTGCAGGCTAAC	58.652	52.381	0.00	0.00	0.00	2.34
336	337	1.067142	CGAGTACAAGGTGCAGGCTAA	60.067	52.381	0.00	0.00	0.00	3.09
337	338	0.530744	CGAGTACAAGGTGCAGGCTA	59.469	55.000	0.00	0.00	0.00	3.93
338	339	1.293498	CGAGTACAAGGTGCAGGCT	59.707	57.895	0.00	0.00	0.00	4.58
339	340	1.741770	CCGAGTACAAGGTGCAGGC	60.742	63.158	0.00	0.00	0.00	4.85
340	341	1.741770	GCCGAGTACAAGGTGCAGG	60.742	63.158	8.19	0.00	0.00	4.85
341	342	0.320771	AAGCCGAGTACAAGGTGCAG	60.321	55.000	8.19	0.00	0.00	4.41
342	343	0.107831	AAAGCCGAGTACAAGGTGCA	59.892	50.000	8.19	0.00	0.00	4.57
343	344	0.796927	GAAAGCCGAGTACAAGGTGC	59.203	55.000	8.19	0.00	0.00	5.01
344	345	2.028930	AGAGAAAGCCGAGTACAAGGTG	60.029	50.000	8.19	0.00	0.00	4.00
345	346	2.231721	GAGAGAAAGCCGAGTACAAGGT	59.768	50.000	8.19	0.00	0.00	3.50
346	347	2.732597	CGAGAGAAAGCCGAGTACAAGG	60.733	54.545	0.00	0.00	0.00	3.61
347	348	2.520979	CGAGAGAAAGCCGAGTACAAG	58.479	52.381	0.00	0.00	0.00	3.16
348	349	1.402456	GCGAGAGAAAGCCGAGTACAA	60.402	52.381	0.00	0.00	0.00	2.41
349	350	0.170561	GCGAGAGAAAGCCGAGTACA	59.829	55.000	0.00	0.00	0.00	2.90
350	351	0.862283	CGCGAGAGAAAGCCGAGTAC	60.862	60.000	0.00	0.00	0.00	2.73
351	352	1.303799	ACGCGAGAGAAAGCCGAGTA	61.304	55.000	15.93	0.00	34.82	2.59
352	353	2.179517	CGCGAGAGAAAGCCGAGT	59.820	61.111	0.00	0.00	0.00	4.18
353	354	1.870016	GACGCGAGAGAAAGCCGAG	60.870	63.158	15.93	0.00	0.00	4.63
354	355	2.178521	GACGCGAGAGAAAGCCGA	59.821	61.111	15.93	0.00	0.00	5.54
355	356	2.881352	GGACGCGAGAGAAAGCCG	60.881	66.667	15.93	0.00	0.00	5.52
356	357	2.509561	GGGACGCGAGAGAAAGCC	60.510	66.667	15.93	0.18	0.00	4.35
357	358	2.509561	GGGGACGCGAGAGAAAGC	60.510	66.667	15.93	0.00	0.00	3.51
358	359	1.139947	GAGGGGACGCGAGAGAAAG	59.860	63.158	15.93	0.00	0.00	2.62
359	360	2.348888	GGAGGGGACGCGAGAGAAA	61.349	63.158	15.93	0.00	0.00	2.52
360	361	1.918467	TAGGAGGGGACGCGAGAGAA	61.918	60.000	15.93	0.00	0.00	2.87
361	362	1.918467	TTAGGAGGGGACGCGAGAGA	61.918	60.000	15.93	0.00	0.00	3.10
362	363	0.824182	ATTAGGAGGGGACGCGAGAG	60.824	60.000	15.93	0.00	0.00	3.20
363	364	0.822532	GATTAGGAGGGGACGCGAGA	60.823	60.000	15.93	0.00	0.00	4.04
364	365	1.107538	TGATTAGGAGGGGACGCGAG	61.108	60.000	15.93	0.00	0.00	5.03
365	366	0.685131	TTGATTAGGAGGGGACGCGA	60.685	55.000	15.93	0.00	0.00	5.87
366	367	0.393077	ATTGATTAGGAGGGGACGCG	59.607	55.000	3.53	3.53	0.00	6.01
367	368	1.416401	TCATTGATTAGGAGGGGACGC	59.584	52.381	0.00	0.00	0.00	5.19
368	369	3.838244	TTCATTGATTAGGAGGGGACG	57.162	47.619	0.00	0.00	0.00	4.79
369	370	6.486993	GTGTATTTCATTGATTAGGAGGGGAC	59.513	42.308	0.00	0.00	0.00	4.46
370	371	6.389869	AGTGTATTTCATTGATTAGGAGGGGA	59.610	38.462	0.00	0.00	0.00	4.81
371	372	6.605119	AGTGTATTTCATTGATTAGGAGGGG	58.395	40.000	0.00	0.00	0.00	4.79
372	373	6.712547	GGAGTGTATTTCATTGATTAGGAGGG	59.287	42.308	0.00	0.00	0.00	4.30
373	374	7.443575	CAGGAGTGTATTTCATTGATTAGGAGG	59.556	40.741	0.00	0.00	0.00	4.30
374	375	7.041508	GCAGGAGTGTATTTCATTGATTAGGAG	60.042	40.741	0.00	0.00	0.00	3.69
375	376	6.767902	GCAGGAGTGTATTTCATTGATTAGGA	59.232	38.462	0.00	0.00	0.00	2.94
376	377	6.293081	CGCAGGAGTGTATTTCATTGATTAGG	60.293	42.308	0.00	0.00	0.00	2.69
377	378	6.258727	ACGCAGGAGTGTATTTCATTGATTAG	59.741	38.462	0.00	0.00	36.54	1.73
378	379	6.112734	ACGCAGGAGTGTATTTCATTGATTA	58.887	36.000	0.00	0.00	36.54	1.75
379	380	4.943705	ACGCAGGAGTGTATTTCATTGATT	59.056	37.500	0.00	0.00	36.54	2.57
380	381	4.517285	ACGCAGGAGTGTATTTCATTGAT	58.483	39.130	0.00	0.00	36.54	2.57
381	382	3.937814	ACGCAGGAGTGTATTTCATTGA	58.062	40.909	0.00	0.00	36.54	2.57
382	383	4.685169	AACGCAGGAGTGTATTTCATTG	57.315	40.909	0.00	0.00	37.54	2.82
383	384	7.391148	AATAAACGCAGGAGTGTATTTCATT	57.609	32.000	0.00	0.00	37.54	2.57
384	385	7.391148	AAATAAACGCAGGAGTGTATTTCAT	57.609	32.000	5.75	0.00	39.17	2.57
385	386	6.811253	AAATAAACGCAGGAGTGTATTTCA	57.189	33.333	5.75	0.00	39.17	2.69
387	388	6.811253	TGAAATAAACGCAGGAGTGTATTT	57.189	33.333	10.01	10.01	43.45	1.40
388	389	6.811253	TTGAAATAAACGCAGGAGTGTATT	57.189	33.333	0.00	0.00	36.40	1.89
389	390	6.811253	TTTGAAATAAACGCAGGAGTGTAT	57.189	33.333	0.00	0.00	37.54	2.29
390	391	6.621316	TTTTGAAATAAACGCAGGAGTGTA	57.379	33.333	0.00	0.00	37.54	2.90
391	392	5.508200	TTTTGAAATAAACGCAGGAGTGT	57.492	34.783	0.00	0.00	40.99	3.55
416	417	9.377383	GCGATATTAACAATAGTACGCATTTTT	57.623	29.630	0.00	0.00	40.46	1.94
417	418	8.552865	TGCGATATTAACAATAGTACGCATTTT	58.447	29.630	17.68	0.00	42.75	1.82
418	419	8.078959	TGCGATATTAACAATAGTACGCATTT	57.921	30.769	17.68	0.00	42.75	2.32
419	420	7.384115	ACTGCGATATTAACAATAGTACGCATT	59.616	33.333	19.83	15.46	44.42	3.56
420	421	6.866770	ACTGCGATATTAACAATAGTACGCAT	59.133	34.615	19.83	12.93	44.42	4.73
421	422	6.210796	ACTGCGATATTAACAATAGTACGCA	58.789	36.000	19.10	19.10	43.93	5.24
422	423	6.686130	ACTGCGATATTAACAATAGTACGC	57.314	37.500	0.00	0.00	40.78	4.42
423	424	9.338291	ACATACTGCGATATTAACAATAGTACG	57.662	33.333	0.00	0.00	0.00	3.67
429	430	9.290483	CGAGATACATACTGCGATATTAACAAT	57.710	33.333	0.00	0.00	0.00	2.71
430	431	8.508875	TCGAGATACATACTGCGATATTAACAA	58.491	33.333	0.00	0.00	0.00	2.83
431	432	8.036273	TCGAGATACATACTGCGATATTAACA	57.964	34.615	0.00	0.00	0.00	2.41
435	436	9.057089	TGATATCGAGATACATACTGCGATATT	57.943	33.333	14.27	2.43	45.68	1.28
437	438	7.711339	ACTGATATCGAGATACATACTGCGATA	59.289	37.037	0.00	0.00	42.51	2.92
438	439	6.540551	ACTGATATCGAGATACATACTGCGAT	59.459	38.462	0.00	0.00	40.89	4.58
439	440	5.875359	ACTGATATCGAGATACATACTGCGA	59.125	40.000	0.00	0.00	0.00	5.10
440	441	6.112994	ACTGATATCGAGATACATACTGCG	57.887	41.667	0.00	0.00	0.00	5.18
441	442	8.831550	TCATACTGATATCGAGATACATACTGC	58.168	37.037	0.00	0.00	0.00	4.40
446	447	9.454859	TGTTCTCATACTGATATCGAGATACAT	57.545	33.333	7.75	0.00	31.13	2.29
447	448	8.848474	TGTTCTCATACTGATATCGAGATACA	57.152	34.615	7.75	10.72	31.13	2.29
448	449	8.394877	CCTGTTCTCATACTGATATCGAGATAC	58.605	40.741	7.75	9.03	31.13	2.24
449	450	8.322091	TCCTGTTCTCATACTGATATCGAGATA	58.678	37.037	7.75	0.00	31.13	1.98
450	451	7.120579	GTCCTGTTCTCATACTGATATCGAGAT	59.879	40.741	7.75	0.00	31.13	2.75
451	452	6.428465	GTCCTGTTCTCATACTGATATCGAGA	59.572	42.308	8.56	6.27	0.00	4.04
452	453	6.205658	TGTCCTGTTCTCATACTGATATCGAG	59.794	42.308	0.00	0.00	0.00	4.04
453	454	6.062095	TGTCCTGTTCTCATACTGATATCGA	58.938	40.000	0.00	0.00	0.00	3.59
454	455	6.319141	TGTCCTGTTCTCATACTGATATCG	57.681	41.667	0.00	0.00	0.00	2.92
457	458	9.987272	CATTTATGTCCTGTTCTCATACTGATA	57.013	33.333	0.00	0.00	0.00	2.15
458	459	8.489489	ACATTTATGTCCTGTTCTCATACTGAT	58.511	33.333	0.00	0.00	35.87	2.90
459	460	7.851228	ACATTTATGTCCTGTTCTCATACTGA	58.149	34.615	0.00	0.00	35.87	3.41
460	461	8.498054	AACATTTATGTCCTGTTCTCATACTG	57.502	34.615	0.00	0.00	40.80	2.74
480	481	9.323985	ACAAGCAACATGTACAAAATTAACATT	57.676	25.926	0.00	0.00	31.60	2.71
481	482	8.885494	ACAAGCAACATGTACAAAATTAACAT	57.115	26.923	0.00	0.00	34.22	2.71
482	483	8.598924	CAACAAGCAACATGTACAAAATTAACA	58.401	29.630	0.00	0.00	0.00	2.41
483	484	8.812329	TCAACAAGCAACATGTACAAAATTAAC	58.188	29.630	0.00	0.00	0.00	2.01
484	485	8.932945	TCAACAAGCAACATGTACAAAATTAA	57.067	26.923	0.00	0.00	0.00	1.40
485	486	7.651304	CCTCAACAAGCAACATGTACAAAATTA	59.349	33.333	0.00	0.00	0.00	1.40
486	487	6.479660	CCTCAACAAGCAACATGTACAAAATT	59.520	34.615	0.00	0.00	0.00	1.82
487	488	5.984926	CCTCAACAAGCAACATGTACAAAAT	59.015	36.000	0.00	0.00	0.00	1.82
488	489	5.347342	CCTCAACAAGCAACATGTACAAAA	58.653	37.500	0.00	0.00	0.00	2.44
489	490	4.736168	GCCTCAACAAGCAACATGTACAAA	60.736	41.667	0.00	0.00	0.00	2.83
490	491	3.243367	GCCTCAACAAGCAACATGTACAA	60.243	43.478	0.00	0.00	0.00	2.41
491	492	2.293122	GCCTCAACAAGCAACATGTACA	59.707	45.455	0.00	0.00	0.00	2.90
492	493	2.293122	TGCCTCAACAAGCAACATGTAC	59.707	45.455	0.00	0.00	35.69	2.90
493	494	2.580962	TGCCTCAACAAGCAACATGTA	58.419	42.857	0.00	0.00	35.69	2.29
494	495	1.401761	TGCCTCAACAAGCAACATGT	58.598	45.000	0.00	0.00	35.69	3.21
495	496	2.333926	CATGCCTCAACAAGCAACATG	58.666	47.619	0.00	0.00	43.36	3.21
496	497	1.274167	CCATGCCTCAACAAGCAACAT	59.726	47.619	0.00	0.00	43.36	2.71
497	498	0.675083	CCATGCCTCAACAAGCAACA	59.325	50.000	0.00	0.00	43.36	3.33
498	499	0.668401	GCCATGCCTCAACAAGCAAC	60.668	55.000	0.00	0.00	43.36	4.17
499	500	0.828762	AGCCATGCCTCAACAAGCAA	60.829	50.000	0.00	0.00	43.36	3.91
500	501	1.228644	AGCCATGCCTCAACAAGCA	60.229	52.632	0.00	0.00	44.45	3.91
501	502	1.214589	CAGCCATGCCTCAACAAGC	59.785	57.895	0.00	0.00	0.00	4.01
502	503	1.601419	CCCAGCCATGCCTCAACAAG	61.601	60.000	0.00	0.00	0.00	3.16
503	504	1.607178	CCCAGCCATGCCTCAACAA	60.607	57.895	0.00	0.00	0.00	2.83
504	505	2.036098	CCCAGCCATGCCTCAACA	59.964	61.111	0.00	0.00	0.00	3.33
505	506	2.578586	ATCCCCAGCCATGCCTCAAC	62.579	60.000	0.00	0.00	0.00	3.18
506	507	2.288642	GATCCCCAGCCATGCCTCAA	62.289	60.000	0.00	0.00	0.00	3.02
507	508	2.697263	ATCCCCAGCCATGCCTCA	60.697	61.111	0.00	0.00	0.00	3.86
508	509	2.114838	GATCCCCAGCCATGCCTC	59.885	66.667	0.00	0.00	0.00	4.70
509	510	1.877672	TTTGATCCCCAGCCATGCCT	61.878	55.000	0.00	0.00	0.00	4.75
510	511	0.977108	TTTTGATCCCCAGCCATGCC	60.977	55.000	0.00	0.00	0.00	4.40
511	512	0.903942	TTTTTGATCCCCAGCCATGC	59.096	50.000	0.00	0.00	0.00	4.06
512	513	1.901159	TGTTTTTGATCCCCAGCCATG	59.099	47.619	0.00	0.00	0.00	3.66
513	514	2.323999	TGTTTTTGATCCCCAGCCAT	57.676	45.000	0.00	0.00	0.00	4.40
514	515	2.323999	ATGTTTTTGATCCCCAGCCA	57.676	45.000	0.00	0.00	0.00	4.75
515	516	3.430790	GCTAATGTTTTTGATCCCCAGCC	60.431	47.826	0.00	0.00	0.00	4.85
516	517	3.195396	TGCTAATGTTTTTGATCCCCAGC	59.805	43.478	0.00	0.00	0.00	4.85
517	518	5.603170	ATGCTAATGTTTTTGATCCCCAG	57.397	39.130	0.00	0.00	0.00	4.45
518	519	5.483231	TCAATGCTAATGTTTTTGATCCCCA	59.517	36.000	0.00	0.00	0.00	4.96
519	520	5.976458	TCAATGCTAATGTTTTTGATCCCC	58.024	37.500	0.00	0.00	0.00	4.81
520	521	7.704789	GATCAATGCTAATGTTTTTGATCCC	57.295	36.000	11.15	0.00	43.27	3.85
522	523	7.195646	TCGGATCAATGCTAATGTTTTTGATC	58.804	34.615	13.04	13.04	46.04	2.92
523	524	7.099266	TCGGATCAATGCTAATGTTTTTGAT	57.901	32.000	0.00	0.00	39.15	2.57
524	525	6.507958	TCGGATCAATGCTAATGTTTTTGA	57.492	33.333	0.00	0.00	0.00	2.69
525	526	6.254157	CCTTCGGATCAATGCTAATGTTTTTG	59.746	38.462	0.00	0.00	0.00	2.44
526	527	6.152661	TCCTTCGGATCAATGCTAATGTTTTT	59.847	34.615	0.00	0.00	0.00	1.94
527	528	5.652014	TCCTTCGGATCAATGCTAATGTTTT	59.348	36.000	0.00	0.00	0.00	2.43
528	529	5.192927	TCCTTCGGATCAATGCTAATGTTT	58.807	37.500	0.00	0.00	0.00	2.83
529	530	4.780815	TCCTTCGGATCAATGCTAATGTT	58.219	39.130	0.00	0.00	0.00	2.71
530	531	4.422073	TCCTTCGGATCAATGCTAATGT	57.578	40.909	0.00	0.00	0.00	2.71
531	532	5.756195	TTTCCTTCGGATCAATGCTAATG	57.244	39.130	0.00	0.00	0.00	1.90
532	533	6.966534	ATTTTCCTTCGGATCAATGCTAAT	57.033	33.333	0.00	0.00	0.00	1.73
533	534	7.201785	GGTTATTTTCCTTCGGATCAATGCTAA	60.202	37.037	0.00	0.00	0.00	3.09
534	535	6.262273	GGTTATTTTCCTTCGGATCAATGCTA	59.738	38.462	0.00	0.00	0.00	3.49
535	536	5.067805	GGTTATTTTCCTTCGGATCAATGCT	59.932	40.000	0.00	0.00	0.00	3.79
536	537	5.163561	TGGTTATTTTCCTTCGGATCAATGC	60.164	40.000	0.00	0.00	0.00	3.56
537	538	6.449635	TGGTTATTTTCCTTCGGATCAATG	57.550	37.500	0.00	0.00	0.00	2.82
538	539	8.796475	CATATGGTTATTTTCCTTCGGATCAAT	58.204	33.333	0.00	0.00	0.00	2.57
539	540	7.996066	TCATATGGTTATTTTCCTTCGGATCAA	59.004	33.333	2.13	0.00	0.00	2.57
540	541	7.513856	TCATATGGTTATTTTCCTTCGGATCA	58.486	34.615	2.13	0.00	0.00	2.92
541	542	7.361286	GCTCATATGGTTATTTTCCTTCGGATC	60.361	40.741	2.13	0.00	0.00	3.36
542	543	6.431234	GCTCATATGGTTATTTTCCTTCGGAT	59.569	38.462	2.13	0.00	0.00	4.18
543	544	5.763204	GCTCATATGGTTATTTTCCTTCGGA	59.237	40.000	2.13	0.00	0.00	4.55
544	545	5.765182	AGCTCATATGGTTATTTTCCTTCGG	59.235	40.000	2.13	0.00	0.00	4.30
545	546	6.867662	AGCTCATATGGTTATTTTCCTTCG	57.132	37.500	2.13	0.00	0.00	3.79
546	547	7.285401	TCCAAGCTCATATGGTTATTTTCCTTC	59.715	37.037	2.13	0.00	37.94	3.46
547	548	7.125391	TCCAAGCTCATATGGTTATTTTCCTT	58.875	34.615	2.13	0.00	37.94	3.36
548	549	6.672593	TCCAAGCTCATATGGTTATTTTCCT	58.327	36.000	2.13	0.00	37.94	3.36
549	550	6.515696	GCTCCAAGCTCATATGGTTATTTTCC	60.516	42.308	2.13	0.00	38.45	3.13
550	551	6.442112	GCTCCAAGCTCATATGGTTATTTTC	58.558	40.000	2.13	0.00	38.45	2.29
551	552	5.009010	CGCTCCAAGCTCATATGGTTATTTT	59.991	40.000	2.13	0.00	39.60	1.82
552	553	4.516698	CGCTCCAAGCTCATATGGTTATTT	59.483	41.667	2.13	0.00	39.60	1.40
553	554	4.067896	CGCTCCAAGCTCATATGGTTATT	58.932	43.478	2.13	0.00	39.60	1.40
554	555	3.668447	CGCTCCAAGCTCATATGGTTAT	58.332	45.455	2.13	0.00	39.60	1.89
555	556	2.806745	GCGCTCCAAGCTCATATGGTTA	60.807	50.000	0.00	0.00	39.60	2.85
556	557	1.959042	CGCTCCAAGCTCATATGGTT	58.041	50.000	2.13	0.00	39.60	3.67
557	558	0.533755	GCGCTCCAAGCTCATATGGT	60.534	55.000	0.00	0.00	39.60	3.55
558	559	0.250209	AGCGCTCCAAGCTCATATGG	60.250	55.000	2.64	0.00	41.83	2.74
559	560	3.302375	AGCGCTCCAAGCTCATATG	57.698	52.632	2.64	0.00	41.83	1.78
570	571	0.669625	AAAACACTACGGAGCGCTCC	60.670	55.000	40.89	40.89	46.18	4.70
571	572	1.145803	AAAAACACTACGGAGCGCTC	58.854	50.000	29.38	29.38	0.00	5.03
572	573	2.443887	TAAAAACACTACGGAGCGCT	57.556	45.000	11.27	11.27	0.00	5.92
573	574	3.524763	TTTAAAAACACTACGGAGCGC	57.475	42.857	0.00	0.00	0.00	5.92
604	605	5.954150	AGAAGCACATCTCACCCATATTTTT	59.046	36.000	0.00	0.00	0.00	1.94
605	606	5.513233	AGAAGCACATCTCACCCATATTTT	58.487	37.500	0.00	0.00	0.00	1.82
606	607	5.121380	AGAAGCACATCTCACCCATATTT	57.879	39.130	0.00	0.00	0.00	1.40
607	608	4.712476	GAGAAGCACATCTCACCCATATT	58.288	43.478	8.74	0.00	44.29	1.28
608	609	4.348863	GAGAAGCACATCTCACCCATAT	57.651	45.455	8.74	0.00	44.29	1.78
609	610	3.827008	GAGAAGCACATCTCACCCATA	57.173	47.619	8.74	0.00	44.29	2.74
610	611	2.706339	GAGAAGCACATCTCACCCAT	57.294	50.000	8.74	0.00	44.29	4.00
616	617	5.679734	TCAGTTTTTGAGAAGCACATCTC	57.320	39.130	7.11	7.11	44.96	2.75
617	618	6.489361	AGATTCAGTTTTTGAGAAGCACATCT	59.511	34.615	0.00	0.00	37.07	2.90
618	619	6.675987	AGATTCAGTTTTTGAGAAGCACATC	58.324	36.000	0.00	0.00	37.07	3.06
619	620	6.645790	AGATTCAGTTTTTGAGAAGCACAT	57.354	33.333	0.00	0.00	37.07	3.21
620	621	7.663081	AGATAGATTCAGTTTTTGAGAAGCACA	59.337	33.333	0.00	0.00	37.07	4.57
621	622	8.038492	AGATAGATTCAGTTTTTGAGAAGCAC	57.962	34.615	0.00	0.00	37.07	4.40
622	623	8.509690	CAAGATAGATTCAGTTTTTGAGAAGCA	58.490	33.333	0.00	0.00	37.07	3.91
623	624	8.510505	ACAAGATAGATTCAGTTTTTGAGAAGC	58.489	33.333	0.00	0.00	37.07	3.86
624	625	9.823098	CACAAGATAGATTCAGTTTTTGAGAAG	57.177	33.333	0.00	0.00	37.07	2.85
625	626	8.292448	GCACAAGATAGATTCAGTTTTTGAGAA	58.708	33.333	0.00	0.00	37.07	2.87
626	627	7.445096	TGCACAAGATAGATTCAGTTTTTGAGA	59.555	33.333	0.00	0.00	37.07	3.27
627	628	7.536622	GTGCACAAGATAGATTCAGTTTTTGAG	59.463	37.037	13.17	0.00	37.07	3.02
628	629	7.362662	GTGCACAAGATAGATTCAGTTTTTGA	58.637	34.615	13.17	0.00	0.00	2.69
629	630	6.303970	CGTGCACAAGATAGATTCAGTTTTTG	59.696	38.462	18.64	0.00	0.00	2.44
630	631	6.373779	CGTGCACAAGATAGATTCAGTTTTT	58.626	36.000	18.64	0.00	0.00	1.94
631	632	5.106555	CCGTGCACAAGATAGATTCAGTTTT	60.107	40.000	18.64	0.00	0.00	2.43
632	633	4.393062	CCGTGCACAAGATAGATTCAGTTT	59.607	41.667	18.64	0.00	0.00	2.66
633	634	3.935203	CCGTGCACAAGATAGATTCAGTT	59.065	43.478	18.64	0.00	0.00	3.16
634	635	3.195610	TCCGTGCACAAGATAGATTCAGT	59.804	43.478	18.64	0.00	0.00	3.41
635	636	3.785486	TCCGTGCACAAGATAGATTCAG	58.215	45.455	18.64	0.00	0.00	3.02
636	637	3.195610	ACTCCGTGCACAAGATAGATTCA	59.804	43.478	18.64	0.00	0.00	2.57
637	638	3.553511	CACTCCGTGCACAAGATAGATTC	59.446	47.826	18.64	0.00	0.00	2.52
638	639	3.055819	ACACTCCGTGCACAAGATAGATT	60.056	43.478	18.64	0.00	36.98	2.40
639	640	2.497675	ACACTCCGTGCACAAGATAGAT	59.502	45.455	18.64	0.00	36.98	1.98
640	641	1.893137	ACACTCCGTGCACAAGATAGA	59.107	47.619	18.64	2.32	36.98	1.98
641	642	1.995484	CACACTCCGTGCACAAGATAG	59.005	52.381	18.64	10.21	39.19	2.08
642	643	2.078849	CACACTCCGTGCACAAGATA	57.921	50.000	18.64	0.00	39.19	1.98
643	644	2.918571	CACACTCCGTGCACAAGAT	58.081	52.632	18.64	5.00	39.19	2.40
644	645	4.436515	CACACTCCGTGCACAAGA	57.563	55.556	18.64	11.91	39.19	3.02
652	653	0.037326	CACCATAGCACACACTCCGT	60.037	55.000	0.00	0.00	0.00	4.69
653	654	0.037326	ACACCATAGCACACACTCCG	60.037	55.000	0.00	0.00	0.00	4.63
654	655	1.726853	GACACCATAGCACACACTCC	58.273	55.000	0.00	0.00	0.00	3.85
655	656	1.336887	ACGACACCATAGCACACACTC	60.337	52.381	0.00	0.00	0.00	3.51
656	657	0.679505	ACGACACCATAGCACACACT	59.320	50.000	0.00	0.00	0.00	3.55
657	658	1.508632	AACGACACCATAGCACACAC	58.491	50.000	0.00	0.00	0.00	3.82
658	659	3.388345	TTAACGACACCATAGCACACA	57.612	42.857	0.00	0.00	0.00	3.72
659	660	3.744426	AGTTTAACGACACCATAGCACAC	59.256	43.478	0.00	0.00	0.00	3.82
660	661	3.997762	AGTTTAACGACACCATAGCACA	58.002	40.909	0.00	0.00	0.00	4.57
661	662	5.352643	AAAGTTTAACGACACCATAGCAC	57.647	39.130	0.00	0.00	0.00	4.40
662	663	7.675962	ATTAAAGTTTAACGACACCATAGCA	57.324	32.000	10.20	0.00	0.00	3.49
663	664	7.007995	GCAATTAAAGTTTAACGACACCATAGC	59.992	37.037	10.20	0.61	0.00	2.97
664	665	7.483691	GGCAATTAAAGTTTAACGACACCATAG	59.516	37.037	10.20	0.00	0.00	2.23
665	666	7.040617	TGGCAATTAAAGTTTAACGACACCATA	60.041	33.333	10.20	0.00	0.00	2.74
666	667	6.153756	GGCAATTAAAGTTTAACGACACCAT	58.846	36.000	10.20	0.00	0.00	3.55
667	668	5.067413	TGGCAATTAAAGTTTAACGACACCA	59.933	36.000	10.20	10.60	0.00	4.17
668	669	5.400188	GTGGCAATTAAAGTTTAACGACACC	59.600	40.000	23.37	15.59	0.00	4.16
669	670	5.972382	TGTGGCAATTAAAGTTTAACGACAC	59.028	36.000	25.36	25.36	0.00	3.67
670	671	6.132791	TGTGGCAATTAAAGTTTAACGACA	57.867	33.333	10.20	10.05	0.00	4.35
671	672	5.116528	GCTGTGGCAATTAAAGTTTAACGAC	59.883	40.000	10.20	7.69	38.54	4.34
672	673	5.216648	GCTGTGGCAATTAAAGTTTAACGA	58.783	37.500	10.20	0.00	38.54	3.85
673	674	4.979197	TGCTGTGGCAATTAAAGTTTAACG	59.021	37.500	10.20	6.29	46.36	3.18
687	688	0.466007	ACATCAACAGTGCTGTGGCA	60.466	50.000	5.53	0.00	44.13	4.92
688	689	0.670162	AACATCAACAGTGCTGTGGC	59.330	50.000	5.53	0.00	44.13	5.01
689	690	2.544277	CCAAACATCAACAGTGCTGTGG	60.544	50.000	5.53	2.86	44.13	4.17
690	691	2.099592	ACCAAACATCAACAGTGCTGTG	59.900	45.455	5.53	1.26	44.13	3.66
692	693	4.379813	GGATACCAAACATCAACAGTGCTG	60.380	45.833	0.00	0.00	0.00	4.41
693	694	3.758554	GGATACCAAACATCAACAGTGCT	59.241	43.478	0.00	0.00	0.00	4.40
694	695	3.505680	TGGATACCAAACATCAACAGTGC	59.494	43.478	0.00	0.00	0.00	4.40
695	696	5.460646	GTTGGATACCAAACATCAACAGTG	58.539	41.667	4.75	0.00	45.73	3.66
696	697	4.215399	CGTTGGATACCAAACATCAACAGT	59.785	41.667	4.75	0.00	45.73	3.55
697	698	4.379394	CCGTTGGATACCAAACATCAACAG	60.379	45.833	4.75	0.00	45.73	3.16
698	699	3.504134	CCGTTGGATACCAAACATCAACA	59.496	43.478	4.75	0.00	45.73	3.33
699	700	3.672241	GCCGTTGGATACCAAACATCAAC	60.672	47.826	4.75	0.00	45.73	3.18
700	701	2.490115	GCCGTTGGATACCAAACATCAA	59.510	45.455	4.75	0.00	45.73	2.57
701	702	2.088423	GCCGTTGGATACCAAACATCA	58.912	47.619	4.75	0.00	45.73	3.07
702	703	1.063469	CGCCGTTGGATACCAAACATC	59.937	52.381	4.75	0.00	45.73	3.06
703	704	1.091537	CGCCGTTGGATACCAAACAT	58.908	50.000	4.75	0.00	45.73	2.71
704	705	1.579084	GCGCCGTTGGATACCAAACA	61.579	55.000	0.00	0.00	45.73	2.83
705	706	1.135939	GCGCCGTTGGATACCAAAC	59.864	57.895	0.00	0.14	45.73	2.93
706	707	1.302383	CTGCGCCGTTGGATACCAAA	61.302	55.000	4.18	0.00	45.73	3.28
707	708	1.743623	CTGCGCCGTTGGATACCAA	60.744	57.895	4.18	0.00	41.69	3.67
708	709	2.125310	CTGCGCCGTTGGATACCA	60.125	61.111	4.18	0.00	0.00	3.25
709	710	3.573491	GCTGCGCCGTTGGATACC	61.573	66.667	4.18	0.00	0.00	2.73
710	711	3.925238	CGCTGCGCCGTTGGATAC	61.925	66.667	9.88	0.00	0.00	2.24
711	712	3.650907	TTCGCTGCGCCGTTGGATA	62.651	57.895	18.65	0.00	0.00	2.59
715	716	3.521308	AAACTTCGCTGCGCCGTTG	62.521	57.895	22.42	11.79	0.00	4.10
716	717	3.276846	AAACTTCGCTGCGCCGTT	61.277	55.556	18.65	18.42	0.00	4.44
717	718	4.012895	CAAACTTCGCTGCGCCGT	62.013	61.111	18.65	13.41	0.00	5.68
719	720	3.542629	AAGCAAACTTCGCTGCGCC	62.543	57.895	18.65	0.00	43.51	6.53
720	721	2.050985	AAGCAAACTTCGCTGCGC	60.051	55.556	18.65	0.00	43.51	6.09
721	722	4.121490	GAAGCAAACTTCGCTGCG	57.879	55.556	17.25	17.25	42.79	5.18
728	729	9.991906	TTGTATTGTACTACTAGAAGCAAACTT	57.008	29.630	0.00	0.00	39.43	2.66
729	730	9.640963	CTTGTATTGTACTACTAGAAGCAAACT	57.359	33.333	0.00	0.00	29.39	2.66
730	731	8.381387	GCTTGTATTGTACTACTAGAAGCAAAC	58.619	37.037	18.17	0.00	32.55	2.93
731	732	8.092068	TGCTTGTATTGTACTACTAGAAGCAAA	58.908	33.333	21.00	8.56	36.25	3.68
732	733	7.608153	TGCTTGTATTGTACTACTAGAAGCAA	58.392	34.615	21.00	11.74	36.25	3.91
733	734	7.165460	TGCTTGTATTGTACTACTAGAAGCA	57.835	36.000	20.15	20.15	36.55	3.91
734	735	6.697892	CCTGCTTGTATTGTACTACTAGAAGC	59.302	42.308	17.13	17.13	32.10	3.86
735	736	6.697892	GCCTGCTTGTATTGTACTACTAGAAG	59.302	42.308	0.00	6.41	32.81	2.85
736	737	6.380274	AGCCTGCTTGTATTGTACTACTAGAA	59.620	38.462	0.00	0.00	29.39	2.10
737	738	5.892119	AGCCTGCTTGTATTGTACTACTAGA	59.108	40.000	0.00	0.00	29.39	2.43
738	739	6.150396	AGCCTGCTTGTATTGTACTACTAG	57.850	41.667	0.00	0.00	0.00	2.57
739	740	7.649533	TTAGCCTGCTTGTATTGTACTACTA	57.350	36.000	0.00	0.00	0.00	1.82
740	741	6.540438	TTAGCCTGCTTGTATTGTACTACT	57.460	37.500	0.00	0.00	0.00	2.57
741	742	5.234543	GCTTAGCCTGCTTGTATTGTACTAC	59.765	44.000	0.00	0.00	0.00	2.73
742	743	5.105106	TGCTTAGCCTGCTTGTATTGTACTA	60.105	40.000	0.29	0.00	0.00	1.82
743	744	4.192317	GCTTAGCCTGCTTGTATTGTACT	58.808	43.478	0.00	0.00	0.00	2.73
744	745	3.938963	TGCTTAGCCTGCTTGTATTGTAC	59.061	43.478	0.29	0.00	0.00	2.90
750	751	0.324614	TGCTGCTTAGCCTGCTTGTA	59.675	50.000	17.11	0.00	0.00	2.41
866	883	1.135333	GGAGCTACACGAAGAGGAAGG	59.865	57.143	0.00	0.00	0.00	3.46
868	885	1.544691	GTGGAGCTACACGAAGAGGAA	59.455	52.381	14.67	0.00	0.00	3.36
893	910	4.141274	CCATCAGAGACTAGAGGAGGAGAA	60.141	50.000	0.00	0.00	0.00	2.87
927	976	2.091555	GCTAGAGGAGGGAGAAGAGGAA	60.092	54.545	0.00	0.00	0.00	3.36
949	998	1.229529	AGGGGAGGCGGAGAAAGAA	60.230	57.895	0.00	0.00	0.00	2.52
950	999	1.990060	CAGGGGAGGCGGAGAAAGA	60.990	63.158	0.00	0.00	0.00	2.52
952	1001	3.717294	GCAGGGGAGGCGGAGAAA	61.717	66.667	0.00	0.00	0.00	2.52
958	1007	3.746949	GAGTGATGCAGGGGAGGCG	62.747	68.421	0.00	0.00	0.00	5.52
1039	1095	1.457455	GGGAGCAGAGGAGGAGGAG	60.457	68.421	0.00	0.00	0.00	3.69
1042	1098	1.042559	GTGAGGGAGCAGAGGAGGAG	61.043	65.000	0.00	0.00	0.00	3.69
1043	1099	1.000993	GTGAGGGAGCAGAGGAGGA	59.999	63.158	0.00	0.00	0.00	3.71
1044	1100	2.063378	GGTGAGGGAGCAGAGGAGG	61.063	68.421	0.00	0.00	0.00	4.30
1045	1101	0.690411	ATGGTGAGGGAGCAGAGGAG	60.690	60.000	0.00	0.00	34.93	3.69
1242	1298	3.631049	GAAGCCGTTGAGCGCGTTC	62.631	63.158	16.69	16.69	39.71	3.95
1419	1475	4.473520	ATGACGCCCTCGCCAAGG	62.474	66.667	0.00	0.00	45.77	3.61
1422	1478	3.030168	AATGATGACGCCCTCGCCA	62.030	57.895	0.00	0.00	39.84	5.69
1447	1503	3.353836	CCAAACGCCGGTGTCCAG	61.354	66.667	23.19	13.82	0.00	3.86
1475	1531	2.050351	CGTCGTCGTGGAAGCTGT	60.050	61.111	0.00	0.00	0.00	4.40
1599	1655	0.599204	GGTACATGGCCACGTATCCG	60.599	60.000	15.78	0.00	40.83	4.18
1602	1658	0.983905	TGGGGTACATGGCCACGTAT	60.984	55.000	15.78	0.00	30.39	3.06
1608	1664	3.138128	GCGTTGGGGTACATGGCC	61.138	66.667	0.00	0.00	0.00	5.36
1615	1671	1.958902	GATACGGTGGCGTTGGGGTA	61.959	60.000	0.00	0.00	0.00	3.69
1625	1681	2.858344	GTCGAGTTCATTGATACGGTGG	59.142	50.000	0.00	0.00	0.00	4.61
1630	1686	1.072089	GCGCGTCGAGTTCATTGATAC	60.072	52.381	8.43	0.00	0.00	2.24
1632	1688	1.742900	CGCGCGTCGAGTTCATTGAT	61.743	55.000	24.19	0.00	41.67	2.57
1635	1691	2.126618	TCGCGCGTCGAGTTCATT	60.127	55.556	30.98	0.00	43.16	2.57
1863	1919	1.330655	TGAAGCCGAGGGAGATGGAC	61.331	60.000	0.00	0.00	0.00	4.02
1875	1931	2.644992	GGCTGGTTGTTGAAGCCG	59.355	61.111	0.00	0.00	46.50	5.52
1878	1934	0.886490	AGAGCGGCTGGTTGTTGAAG	60.886	55.000	7.50	0.00	0.00	3.02
1948	2004	2.729491	CGCTGACGCAGACACGAA	60.729	61.111	10.46	0.00	36.70	3.85
1995	2051	1.682451	ATGGGATGCCATTGTGCAGC	61.682	55.000	13.89	6.78	45.93	5.25
1996	2052	0.104120	CATGGGATGCCATTGTGCAG	59.896	55.000	17.32	0.00	45.93	4.41
2067	2123	0.604511	TCGTGTCTCCGTAGCTCACA	60.605	55.000	0.00	0.00	31.92	3.58
2072	2128	4.074454	GCTTCGTGTCTCCGTAGC	57.926	61.111	0.00	0.00	42.48	3.58
2103	2159	1.153823	CGACGTGACCCCAGTGATC	60.154	63.158	0.00	0.00	0.00	2.92
2146	2202	2.476619	CGTTGTAGACCAGCTTCACTTG	59.523	50.000	0.00	0.00	0.00	3.16
2150	2206	2.030185	GTCTCGTTGTAGACCAGCTTCA	60.030	50.000	0.00	0.00	40.06	3.02
2213	2269	5.809562	CAGACGATAATGCTCTTCTTTGTCT	59.190	40.000	0.00	0.00	33.57	3.41
2340	2396	3.492656	GCAGCGAATACTCACCCATTAGA	60.493	47.826	0.00	0.00	0.00	2.10
2343	2399	1.668419	GCAGCGAATACTCACCCATT	58.332	50.000	0.00	0.00	0.00	3.16
2394	2450	1.453524	GTGATATACTTGAGCAGCGCG	59.546	52.381	0.00	0.00	0.00	6.86
2436	2492	1.728971	GTCTGCTGGAACTTGATCGTG	59.271	52.381	0.00	0.00	0.00	4.35
2574	2630	4.966787	GCAACGGGTGGCCAGGAA	62.967	66.667	5.11	0.00	0.00	3.36
2589	2645	2.531927	CTACGTACGCCAACGGAGCA	62.532	60.000	16.72	0.00	46.07	4.26
2718	2774	1.475034	GCAGACTTAATCATGGCCGGA	60.475	52.381	5.05	0.00	0.00	5.14
2913	2987	4.130281	GTGTAGTTCGCGGCGCAC	62.130	66.667	32.61	22.88	0.00	5.34
3271	3361	4.314440	TGACCTGGTGACTGCCGC	62.314	66.667	2.82	0.00	0.00	6.53
3293	3383	2.356553	CACACCACCACGTACGGG	60.357	66.667	21.06	16.64	0.00	5.28
3400	3491	9.916360	TGTGACTGAGAAATATAAGGTAGAGTA	57.084	33.333	0.00	0.00	0.00	2.59
3401	3492	8.824756	TGTGACTGAGAAATATAAGGTAGAGT	57.175	34.615	0.00	0.00	0.00	3.24
3404	3495	7.923344	CCACTGTGACTGAGAAATATAAGGTAG	59.077	40.741	9.86	0.00	0.00	3.18
3405	3496	7.618117	TCCACTGTGACTGAGAAATATAAGGTA	59.382	37.037	9.86	0.00	0.00	3.08
3406	3497	6.440647	TCCACTGTGACTGAGAAATATAAGGT	59.559	38.462	9.86	0.00	0.00	3.50
3407	3498	6.758886	GTCCACTGTGACTGAGAAATATAAGG	59.241	42.308	9.86	0.00	32.39	2.69
3408	3499	7.551585	AGTCCACTGTGACTGAGAAATATAAG	58.448	38.462	9.86	0.00	43.80	1.73
3409	3500	7.482169	AGTCCACTGTGACTGAGAAATATAA	57.518	36.000	9.86	0.00	43.80	0.98
3536	3628	9.846248	ACAATTATGAAGAGCACAAAAGATAAC	57.154	29.630	0.00	0.00	0.00	1.89
3540	3632	8.169977	AGAACAATTATGAAGAGCACAAAAGA	57.830	30.769	0.00	0.00	0.00	2.52
3557	3649	7.224557	CGGTTCAATGGAAAAGAAAGAACAATT	59.775	33.333	0.00	0.00	36.52	2.32
3558	3650	6.701400	CGGTTCAATGGAAAAGAAAGAACAAT	59.299	34.615	0.00	0.00	36.52	2.71
3561	3653	5.827666	TCGGTTCAATGGAAAAGAAAGAAC	58.172	37.500	0.00	0.00	34.13	3.01
3567	3661	5.070001	ACTCAATCGGTTCAATGGAAAAGA	58.930	37.500	0.00	0.00	34.13	2.52
3592	3686	2.173382	GTCAACACATGTCGCGCC	59.827	61.111	0.00	0.00	0.00	6.53
3616	3710	2.689983	GGGCTCACCAAATCACCAATAG	59.310	50.000	0.00	0.00	39.85	1.73
3620	3714	1.076549	GGGGCTCACCAAATCACCA	59.923	57.895	0.00	0.00	42.91	4.17
3624	3718	1.141858	CCTCTAGGGGCTCACCAAATC	59.858	57.143	0.00	0.00	42.91	2.17
3626	3720	2.696864	CCTCTAGGGGCTCACCAAA	58.303	57.895	0.00	0.00	42.91	3.28
3644	3738	2.273588	TTATGGCTTACACCCGGGCC	62.274	60.000	24.08	15.94	44.31	5.80
3645	3739	0.179001	ATTATGGCTTACACCCGGGC	60.179	55.000	24.08	4.66	0.00	6.13
3646	3740	1.604604	CATTATGGCTTACACCCGGG	58.395	55.000	22.25	22.25	0.00	5.73
3647	3741	0.951558	GCATTATGGCTTACACCCGG	59.048	55.000	0.00	0.00	0.00	5.73
3648	3742	1.967319	AGCATTATGGCTTACACCCG	58.033	50.000	0.00	0.00	42.71	5.28
3650	3744	3.744660	AGCTAGCATTATGGCTTACACC	58.255	45.455	18.83	0.00	42.71	4.16
3652	3746	5.070446	ACACTAGCTAGCATTATGGCTTACA	59.930	40.000	20.91	0.00	42.71	2.41
3653	3747	5.542779	ACACTAGCTAGCATTATGGCTTAC	58.457	41.667	20.91	0.00	42.71	2.34
3654	3748	5.808366	ACACTAGCTAGCATTATGGCTTA	57.192	39.130	20.91	0.00	42.71	3.09
3655	3749	4.696479	ACACTAGCTAGCATTATGGCTT	57.304	40.909	20.91	0.00	42.71	4.35
3657	3751	4.499183	CCTACACTAGCTAGCATTATGGC	58.501	47.826	20.91	0.00	0.00	4.40
3658	3752	4.499183	GCCTACACTAGCTAGCATTATGG	58.501	47.826	20.91	15.18	0.00	2.74
3659	3753	4.021104	TGGCCTACACTAGCTAGCATTATG	60.021	45.833	20.91	13.07	0.00	1.90
3660	3754	4.160329	TGGCCTACACTAGCTAGCATTAT	58.840	43.478	20.91	4.54	0.00	1.28
3661	3755	3.572642	TGGCCTACACTAGCTAGCATTA	58.427	45.455	20.91	8.31	0.00	1.90
3662	3756	2.398588	TGGCCTACACTAGCTAGCATT	58.601	47.619	20.91	7.56	0.00	3.56
3663	3757	2.088104	TGGCCTACACTAGCTAGCAT	57.912	50.000	20.91	11.33	0.00	3.79
3664	3758	1.860641	TTGGCCTACACTAGCTAGCA	58.139	50.000	20.91	5.80	0.00	3.49
3665	3759	2.168728	AGTTTGGCCTACACTAGCTAGC	59.831	50.000	20.91	6.62	0.00	3.42
3666	3760	3.447586	TCAGTTTGGCCTACACTAGCTAG	59.552	47.826	19.44	19.44	0.00	3.42
3667	3761	3.437213	TCAGTTTGGCCTACACTAGCTA	58.563	45.455	3.32	0.00	0.00	3.32
3668	3762	2.257207	TCAGTTTGGCCTACACTAGCT	58.743	47.619	3.32	0.00	0.00	3.32
3669	3763	2.762535	TCAGTTTGGCCTACACTAGC	57.237	50.000	3.32	0.00	0.00	3.42
3670	3764	4.080863	AGGATTCAGTTTGGCCTACACTAG	60.081	45.833	3.32	0.00	0.00	2.57
3671	3765	3.844211	AGGATTCAGTTTGGCCTACACTA	59.156	43.478	3.32	0.00	0.00	2.74
3672	3766	2.644798	AGGATTCAGTTTGGCCTACACT	59.355	45.455	3.32	0.00	0.00	3.55
3678	3772	0.244721	GTGCAGGATTCAGTTTGGCC	59.755	55.000	0.00	0.00	0.00	5.36
3732	3832	2.053627	GCCACAATGCTCGAAAACTTG	58.946	47.619	0.00	0.00	0.00	3.16
3750	3850	2.066262	TCAAGTTCGATCGTTCTTGCC	58.934	47.619	30.16	11.26	37.68	4.52
3830	3930	3.517612	ACACTTGAGTACTGGTACCCAT	58.482	45.455	10.07	0.00	36.75	4.00
3836	3936	4.100963	TCATGTCAACACTTGAGTACTGGT	59.899	41.667	0.00	0.00	41.01	4.00
3837	3937	4.449068	GTCATGTCAACACTTGAGTACTGG	59.551	45.833	0.00	0.00	41.01	4.00
3838	3938	5.049828	TGTCATGTCAACACTTGAGTACTG	58.950	41.667	0.00	0.00	41.01	2.74
3839	3939	5.276461	TGTCATGTCAACACTTGAGTACT	57.724	39.130	0.00	0.00	41.01	2.73
3840	3940	5.466728	ACATGTCATGTCAACACTTGAGTAC	59.533	40.000	12.87	0.00	39.92	2.73
3841	3941	5.466393	CACATGTCATGTCAACACTTGAGTA	59.534	40.000	15.73	0.00	42.70	2.59
3842	3942	4.274214	CACATGTCATGTCAACACTTGAGT	59.726	41.667	15.73	0.00	42.70	3.41
3843	3943	4.512571	TCACATGTCATGTCAACACTTGAG	59.487	41.667	15.73	1.28	42.70	3.02
3844	3944	4.450053	TCACATGTCATGTCAACACTTGA	58.550	39.130	15.73	5.09	42.70	3.02
3845	3945	4.816786	TCACATGTCATGTCAACACTTG	57.183	40.909	15.73	2.75	42.70	3.16
3931	4043	2.723719	GCGTTGCCGTCGTCTAACC	61.724	63.158	0.00	0.00	36.15	2.85
3938	4050	3.185365	TGCTATGCGTTGCCGTCG	61.185	61.111	9.88	0.00	36.15	5.12
3954	4074	1.269569	TGTTGCTGTGAGTACGAGGTG	60.270	52.381	0.00	0.00	0.00	4.00
3957	4077	3.381045	TCTTTGTTGCTGTGAGTACGAG	58.619	45.455	0.00	0.00	0.00	4.18
3984	4104	2.911928	GCCTCCTAGCCTGGTTCC	59.088	66.667	0.00	0.00	0.00	3.62
3993	4113	2.561569	CAATTTACGTGGGCCTCCTAG	58.438	52.381	4.53	0.00	0.00	3.02
4007	4127	1.472082	CATGTCCACTGCCGCAATTTA	59.528	47.619	0.00	0.00	0.00	1.40
4024	4144	3.824443	TGCCTCAAATCAGGATATGCATG	59.176	43.478	10.16	0.00	35.20	4.06
4050	4170	7.663081	AGAATCGACATCATAAATGCCATTACT	59.337	33.333	0.00	0.00	0.00	2.24
4070	4190	5.641209	CCTTATCTTTCCAGGCATAGAATCG	59.359	44.000	0.00	0.00	0.00	3.34

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.