Multiple sequence alignment - TraesCS6A01G142800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G142800 chr6A 100.000 2201 0 0 1 2201 119090460 119092660 0.000000e+00 4065
1 TraesCS6A01G142800 chr6A 91.607 834 64 5 489 1320 119033954 119034783 0.000000e+00 1147
2 TraesCS6A01G142800 chr6A 83.938 909 119 13 1310 2201 119081019 119081917 0.000000e+00 845
3 TraesCS6A01G142800 chr6A 89.083 229 24 1 879 1106 277221362 277221590 1.290000e-72 283
4 TraesCS6A01G142800 chr5A 90.164 976 87 8 489 1460 433008828 433009798 0.000000e+00 1262
5 TraesCS6A01G142800 chr5A 89.979 938 89 5 489 1423 432991377 432992312 0.000000e+00 1206
6 TraesCS6A01G142800 chr5A 86.383 235 32 0 1959 2193 401880283 401880517 7.800000e-65 257
7 TraesCS6A01G142800 chr2A 88.832 976 98 10 489 1460 365070489 365071457 0.000000e+00 1188
8 TraesCS6A01G142800 chr2A 89.335 947 84 9 489 1431 365062198 365063131 0.000000e+00 1173
9 TraesCS6A01G142800 chr2A 97.925 241 5 0 1 241 444009934 444009694 3.380000e-113 418
10 TraesCS6A01G142800 chr3A 96.552 493 17 0 2 494 310487327 310487819 0.000000e+00 817
11 TraesCS6A01G142800 chr4A 96.708 486 16 0 1 486 215347740 215347255 0.000000e+00 809
12 TraesCS6A01G142800 chr2D 94.422 502 24 4 1 502 610264622 610264125 0.000000e+00 769
13 TraesCS6A01G142800 chr5B 92.089 493 32 4 5 493 676645719 676645230 0.000000e+00 688
14 TraesCS6A01G142800 chr5B 85.859 198 25 3 545 741 435876215 435876020 7.960000e-50 207
15 TraesCS6A01G142800 chr7A 93.077 390 25 2 108 496 39811576 39811188 8.820000e-159 569
16 TraesCS6A01G142800 chr7A 92.308 390 28 2 108 496 39795990 39795602 8.880000e-154 553
17 TraesCS6A01G142800 chr7A 91.795 390 30 2 108 496 39779714 39779326 1.920000e-150 542
18 TraesCS6A01G142800 chr7A 84.302 344 50 3 148 490 735728610 735728270 1.260000e-87 333
19 TraesCS6A01G142800 chr7A 91.837 98 8 0 31 128 39779693 39779596 1.060000e-28 137
20 TraesCS6A01G142800 chr7A 91.837 98 8 0 31 128 39811555 39811458 1.060000e-28 137
21 TraesCS6A01G142800 chr7A 90.816 98 9 0 31 128 39795969 39795872 4.930000e-27 132
22 TraesCS6A01G142800 chr6D 86.849 365 44 4 130 492 161250138 161249776 2.630000e-109 405
23 TraesCS6A01G142800 chr5D 87.981 208 25 0 1994 2201 191697388 191697181 1.690000e-61 246
24 TraesCS6A01G142800 chr5D 91.549 142 12 0 2060 2201 334141419 334141560 1.720000e-46 196
25 TraesCS6A01G142800 chr5D 83.077 130 18 4 1969 2095 107270396 107270524 4.970000e-22 115
26 TraesCS6A01G142800 chr4D 85.854 205 25 4 545 745 80599315 80599111 4.760000e-52 215
27 TraesCS6A01G142800 chr7B 87.912 182 21 1 545 726 545265197 545265017 1.710000e-51 213
28 TraesCS6A01G142800 chr7B 86.010 193 26 1 879 1070 359421671 359421863 2.860000e-49 206
29 TraesCS6A01G142800 chr4B 84.834 211 24 6 544 749 59978316 59978523 2.860000e-49 206
30 TraesCS6A01G142800 chr1B 84.360 211 26 6 545 751 228976982 228976775 1.330000e-47 200
31 TraesCS6A01G142800 chr1B 85.276 163 18 5 804 964 288430402 288430560 1.750000e-36 163
32 TraesCS6A01G142800 chr1B 89.655 87 6 3 1990 2076 492618146 492618063 8.310000e-20 108
33 TraesCS6A01G142800 chrUn 85.276 163 18 5 804 964 182225369 182225211 1.750000e-36 163
34 TraesCS6A01G142800 chr7D 87.619 105 12 1 2018 2121 360372089 360371985 1.070000e-23 121
35 TraesCS6A01G142800 chr2B 83.636 110 16 1 1128 1235 454876047 454875938 3.870000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G142800 chr6A 119090460 119092660 2200 False 4065 4065 100.000 1 2201 1 chr6A.!!$F3 2200
1 TraesCS6A01G142800 chr6A 119033954 119034783 829 False 1147 1147 91.607 489 1320 1 chr6A.!!$F1 831
2 TraesCS6A01G142800 chr6A 119081019 119081917 898 False 845 845 83.938 1310 2201 1 chr6A.!!$F2 891
3 TraesCS6A01G142800 chr5A 433008828 433009798 970 False 1262 1262 90.164 489 1460 1 chr5A.!!$F3 971
4 TraesCS6A01G142800 chr5A 432991377 432992312 935 False 1206 1206 89.979 489 1423 1 chr5A.!!$F2 934
5 TraesCS6A01G142800 chr2A 365070489 365071457 968 False 1188 1188 88.832 489 1460 1 chr2A.!!$F2 971
6 TraesCS6A01G142800 chr2A 365062198 365063131 933 False 1173 1173 89.335 489 1431 1 chr2A.!!$F1 942

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
435 436 0.038526 GTTGATGTCGACGAGTGGGT 60.039 55.0 11.62 0.0 0.0 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1457 1463 0.526524 CACAGCTCGTAGCAGGTAGC 60.527 60.0 9.09 0.0 45.56 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 7.062749 TGGTACTATAGTGGATGTTGATTCC 57.937 40.000 15.90 2.17 0.00 3.01
42 43 6.844388 TGGTACTATAGTGGATGTTGATTCCT 59.156 38.462 15.90 0.00 34.17 3.36
43 44 8.008332 TGGTACTATAGTGGATGTTGATTCCTA 58.992 37.037 15.90 0.00 34.17 2.94
44 45 8.305317 GGTACTATAGTGGATGTTGATTCCTAC 58.695 40.741 15.90 0.00 34.17 3.18
45 46 7.304497 ACTATAGTGGATGTTGATTCCTACC 57.696 40.000 4.10 0.00 34.17 3.18
46 47 6.844388 ACTATAGTGGATGTTGATTCCTACCA 59.156 38.462 4.10 0.00 34.17 3.25
47 48 4.494091 AGTGGATGTTGATTCCTACCAG 57.506 45.455 0.00 0.00 34.17 4.00
48 49 3.200825 AGTGGATGTTGATTCCTACCAGG 59.799 47.826 0.00 0.00 36.46 4.45
49 50 3.054361 GTGGATGTTGATTCCTACCAGGT 60.054 47.826 0.00 0.00 36.53 4.00
50 51 4.163458 GTGGATGTTGATTCCTACCAGGTA 59.837 45.833 0.00 0.00 36.53 3.08
51 52 4.163458 TGGATGTTGATTCCTACCAGGTAC 59.837 45.833 0.00 0.00 36.53 3.34
52 53 4.444449 GGATGTTGATTCCTACCAGGTACC 60.444 50.000 2.73 2.73 36.53 3.34
53 54 3.522759 TGTTGATTCCTACCAGGTACCA 58.477 45.455 15.94 0.00 36.53 3.25
54 55 4.108570 TGTTGATTCCTACCAGGTACCAT 58.891 43.478 15.94 1.25 36.53 3.55
55 56 5.282129 TGTTGATTCCTACCAGGTACCATA 58.718 41.667 15.94 2.50 36.53 2.74
56 57 5.908831 TGTTGATTCCTACCAGGTACCATAT 59.091 40.000 15.94 0.44 36.53 1.78
57 58 6.183361 TGTTGATTCCTACCAGGTACCATATG 60.183 42.308 15.94 3.41 36.53 1.78
58 59 4.286032 TGATTCCTACCAGGTACCATATGC 59.714 45.833 15.94 0.00 36.53 3.14
59 60 3.630625 TCCTACCAGGTACCATATGCT 57.369 47.619 15.94 0.00 36.53 3.79
60 61 4.752621 TCCTACCAGGTACCATATGCTA 57.247 45.455 15.94 0.00 36.53 3.49
61 62 5.082633 TCCTACCAGGTACCATATGCTAA 57.917 43.478 15.94 0.00 36.53 3.09
62 63 5.469579 TCCTACCAGGTACCATATGCTAAA 58.530 41.667 15.94 0.00 36.53 1.85
63 64 5.542635 TCCTACCAGGTACCATATGCTAAAG 59.457 44.000 15.94 0.00 36.53 1.85
64 65 4.706842 ACCAGGTACCATATGCTAAAGG 57.293 45.455 15.94 2.50 0.00 3.11
65 66 4.045022 ACCAGGTACCATATGCTAAAGGT 58.955 43.478 15.94 3.10 38.14 3.50
66 67 4.477213 ACCAGGTACCATATGCTAAAGGTT 59.523 41.667 15.94 0.00 35.62 3.50
67 68 5.668535 ACCAGGTACCATATGCTAAAGGTTA 59.331 40.000 15.94 0.00 35.62 2.85
68 69 6.331837 ACCAGGTACCATATGCTAAAGGTTAT 59.668 38.462 15.94 0.00 35.62 1.89
69 70 6.655003 CCAGGTACCATATGCTAAAGGTTATG 59.345 42.308 15.94 0.00 35.62 1.90
70 71 7.450074 CAGGTACCATATGCTAAAGGTTATGA 58.550 38.462 15.94 0.00 35.62 2.15
71 72 8.103305 CAGGTACCATATGCTAAAGGTTATGAT 58.897 37.037 15.94 0.00 35.62 2.45
72 73 9.333961 AGGTACCATATGCTAAAGGTTATGATA 57.666 33.333 15.94 0.00 35.62 2.15
73 74 9.601217 GGTACCATATGCTAAAGGTTATGATAG 57.399 37.037 7.15 0.00 35.62 2.08
74 75 9.601217 GTACCATATGCTAAAGGTTATGATAGG 57.399 37.037 0.00 0.00 35.62 2.57
75 76 8.219660 ACCATATGCTAAAGGTTATGATAGGT 57.780 34.615 0.00 0.00 0.00 3.08
76 77 9.333961 ACCATATGCTAAAGGTTATGATAGGTA 57.666 33.333 0.00 0.00 0.00 3.08
77 78 9.601217 CCATATGCTAAAGGTTATGATAGGTAC 57.399 37.037 0.00 0.00 0.00 3.34
82 83 9.375974 TGCTAAAGGTTATGATAGGTACATAGT 57.624 33.333 0.00 0.00 32.88 2.12
83 84 9.857957 GCTAAAGGTTATGATAGGTACATAGTC 57.142 37.037 0.00 0.00 32.88 2.59
87 88 8.596781 AGGTTATGATAGGTACATAGTCATCC 57.403 38.462 12.54 10.19 32.88 3.51
88 89 8.402683 AGGTTATGATAGGTACATAGTCATCCT 58.597 37.037 12.54 11.56 32.88 3.24
89 90 9.696572 GGTTATGATAGGTACATAGTCATCCTA 57.303 37.037 12.54 0.00 35.62 2.94
96 97 7.931015 AGGTACATAGTCATCCTATTTTCCA 57.069 36.000 0.00 0.00 33.96 3.53
97 98 8.331931 AGGTACATAGTCATCCTATTTTCCAA 57.668 34.615 0.00 0.00 33.96 3.53
98 99 8.949421 AGGTACATAGTCATCCTATTTTCCAAT 58.051 33.333 0.00 0.00 33.96 3.16
99 100 9.003658 GGTACATAGTCATCCTATTTTCCAATG 57.996 37.037 0.00 0.00 33.96 2.82
100 101 9.561069 GTACATAGTCATCCTATTTTCCAATGT 57.439 33.333 0.00 0.00 33.96 2.71
101 102 8.455903 ACATAGTCATCCTATTTTCCAATGTG 57.544 34.615 0.00 0.00 33.96 3.21
102 103 5.841957 AGTCATCCTATTTTCCAATGTGC 57.158 39.130 0.00 0.00 0.00 4.57
103 104 5.263599 AGTCATCCTATTTTCCAATGTGCA 58.736 37.500 0.00 0.00 0.00 4.57
104 105 5.126061 AGTCATCCTATTTTCCAATGTGCAC 59.874 40.000 10.75 10.75 0.00 4.57
105 106 5.015515 TCATCCTATTTTCCAATGTGCACA 58.984 37.500 24.08 24.08 0.00 4.57
106 107 5.479724 TCATCCTATTTTCCAATGTGCACAA 59.520 36.000 25.72 5.47 0.00 3.33
107 108 5.999205 TCCTATTTTCCAATGTGCACAAT 57.001 34.783 25.72 13.73 0.00 2.71
108 109 7.341512 TCATCCTATTTTCCAATGTGCACAATA 59.658 33.333 25.72 13.69 0.00 1.90
109 110 7.473735 TCCTATTTTCCAATGTGCACAATAA 57.526 32.000 25.72 12.54 0.00 1.40
110 111 8.076910 TCCTATTTTCCAATGTGCACAATAAT 57.923 30.769 25.72 15.42 0.00 1.28
111 112 8.196771 TCCTATTTTCCAATGTGCACAATAATC 58.803 33.333 25.72 0.00 0.00 1.75
112 113 7.980662 CCTATTTTCCAATGTGCACAATAATCA 59.019 33.333 25.72 5.98 0.00 2.57
113 114 9.368674 CTATTTTCCAATGTGCACAATAATCAA 57.631 29.630 25.72 13.32 0.00 2.57
114 115 7.418840 TTTTCCAATGTGCACAATAATCAAC 57.581 32.000 25.72 0.00 0.00 3.18
115 116 5.070770 TCCAATGTGCACAATAATCAACC 57.929 39.130 25.72 0.00 0.00 3.77
116 117 4.525874 TCCAATGTGCACAATAATCAACCA 59.474 37.500 25.72 0.00 0.00 3.67
117 118 5.011431 TCCAATGTGCACAATAATCAACCAA 59.989 36.000 25.72 0.00 0.00 3.67
118 119 5.875910 CCAATGTGCACAATAATCAACCAAT 59.124 36.000 25.72 0.00 0.00 3.16
119 120 7.040494 CCAATGTGCACAATAATCAACCAATA 58.960 34.615 25.72 0.00 0.00 1.90
120 121 7.711772 CCAATGTGCACAATAATCAACCAATAT 59.288 33.333 25.72 0.00 0.00 1.28
121 122 9.747293 CAATGTGCACAATAATCAACCAATATA 57.253 29.630 25.72 0.00 0.00 0.86
123 124 9.917129 ATGTGCACAATAATCAACCAATATATG 57.083 29.630 25.72 0.00 0.00 1.78
124 125 9.129532 TGTGCACAATAATCAACCAATATATGA 57.870 29.630 19.28 0.00 0.00 2.15
139 140 9.071276 ACCAATATATGATGAAATGTTGACTCC 57.929 33.333 0.00 0.00 0.00 3.85
140 141 9.293404 CCAATATATGATGAAATGTTGACTCCT 57.707 33.333 0.00 0.00 0.00 3.69
143 144 9.950496 ATATATGATGAAATGTTGACTCCTACC 57.050 33.333 0.00 0.00 0.00 3.18
144 145 4.503910 TGATGAAATGTTGACTCCTACCG 58.496 43.478 0.00 0.00 0.00 4.02
145 146 3.328382 TGAAATGTTGACTCCTACCGG 57.672 47.619 0.00 0.00 0.00 5.28
146 147 2.007608 GAAATGTTGACTCCTACCGGC 58.992 52.381 0.00 0.00 0.00 6.13
147 148 1.276622 AATGTTGACTCCTACCGGCT 58.723 50.000 0.00 0.00 0.00 5.52
148 149 2.154567 ATGTTGACTCCTACCGGCTA 57.845 50.000 0.00 0.00 0.00 3.93
149 150 1.180029 TGTTGACTCCTACCGGCTAC 58.820 55.000 0.00 0.00 0.00 3.58
150 151 0.459078 GTTGACTCCTACCGGCTACC 59.541 60.000 0.00 0.00 0.00 3.18
151 152 0.040058 TTGACTCCTACCGGCTACCA 59.960 55.000 0.00 0.00 0.00 3.25
152 153 0.260816 TGACTCCTACCGGCTACCAT 59.739 55.000 0.00 0.00 0.00 3.55
153 154 1.496001 TGACTCCTACCGGCTACCATA 59.504 52.381 0.00 0.00 0.00 2.74
154 155 2.109480 TGACTCCTACCGGCTACCATAT 59.891 50.000 0.00 0.00 0.00 1.78
155 156 2.492484 GACTCCTACCGGCTACCATATG 59.508 54.545 0.00 0.00 0.00 1.78
156 157 1.204941 CTCCTACCGGCTACCATATGC 59.795 57.143 0.00 0.00 0.00 3.14
157 158 1.203137 TCCTACCGGCTACCATATGCT 60.203 52.381 0.00 0.00 0.00 3.79
158 159 2.042026 TCCTACCGGCTACCATATGCTA 59.958 50.000 0.00 0.00 0.00 3.49
159 160 2.829720 CCTACCGGCTACCATATGCTAA 59.170 50.000 0.00 0.00 0.00 3.09
160 161 3.259876 CCTACCGGCTACCATATGCTAAA 59.740 47.826 0.00 0.00 0.00 1.85
161 162 3.402628 ACCGGCTACCATATGCTAAAG 57.597 47.619 0.00 0.00 0.00 1.85
162 163 2.038557 ACCGGCTACCATATGCTAAAGG 59.961 50.000 0.00 0.00 0.00 3.11
163 164 2.038557 CCGGCTACCATATGCTAAAGGT 59.961 50.000 0.00 0.00 38.14 3.50
164 165 3.496160 CCGGCTACCATATGCTAAAGGTT 60.496 47.826 0.00 0.00 35.62 3.50
165 166 4.262721 CCGGCTACCATATGCTAAAGGTTA 60.263 45.833 0.00 0.00 35.62 2.85
166 167 5.488341 CGGCTACCATATGCTAAAGGTTAT 58.512 41.667 0.00 0.00 35.62 1.89
167 168 5.581085 CGGCTACCATATGCTAAAGGTTATC 59.419 44.000 0.00 0.00 35.62 1.75
168 169 6.472887 GGCTACCATATGCTAAAGGTTATCA 58.527 40.000 0.00 0.00 35.62 2.15
169 170 7.112779 GGCTACCATATGCTAAAGGTTATCAT 58.887 38.462 0.00 0.00 35.62 2.45
170 171 8.265055 GGCTACCATATGCTAAAGGTTATCATA 58.735 37.037 0.00 0.00 35.62 2.15
171 172 9.319143 GCTACCATATGCTAAAGGTTATCATAG 57.681 37.037 0.00 0.00 35.62 2.23
172 173 9.823647 CTACCATATGCTAAAGGTTATCATAGG 57.176 37.037 0.00 0.00 35.62 2.57
173 174 7.112779 ACCATATGCTAAAGGTTATCATAGGC 58.887 38.462 0.00 0.00 0.00 3.93
174 175 7.112122 CCATATGCTAAAGGTTATCATAGGCA 58.888 38.462 0.00 0.00 0.00 4.75
175 176 7.066284 CCATATGCTAAAGGTTATCATAGGCAC 59.934 40.741 0.00 0.00 0.00 5.01
176 177 5.366482 TGCTAAAGGTTATCATAGGCACA 57.634 39.130 0.00 0.00 0.00 4.57
177 178 5.940617 TGCTAAAGGTTATCATAGGCACAT 58.059 37.500 0.00 0.00 0.00 3.21
178 179 6.364701 TGCTAAAGGTTATCATAGGCACATT 58.635 36.000 0.00 0.00 0.00 2.71
179 180 6.262944 TGCTAAAGGTTATCATAGGCACATTG 59.737 38.462 0.00 0.00 0.00 2.82
180 181 6.263168 GCTAAAGGTTATCATAGGCACATTGT 59.737 38.462 0.00 0.00 0.00 2.71
181 182 6.699575 AAAGGTTATCATAGGCACATTGTC 57.300 37.500 0.00 0.00 0.00 3.18
182 183 5.372343 AGGTTATCATAGGCACATTGTCA 57.628 39.130 0.00 0.00 0.00 3.58
183 184 5.945310 AGGTTATCATAGGCACATTGTCAT 58.055 37.500 0.00 0.00 0.00 3.06
184 185 6.000219 AGGTTATCATAGGCACATTGTCATC 59.000 40.000 0.00 0.00 0.00 2.92
185 186 5.182001 GGTTATCATAGGCACATTGTCATCC 59.818 44.000 0.00 0.00 0.00 3.51
186 187 4.719026 ATCATAGGCACATTGTCATCCT 57.281 40.909 6.90 6.90 0.00 3.24
187 188 5.830799 ATCATAGGCACATTGTCATCCTA 57.169 39.130 9.93 9.93 34.31 2.94
188 189 5.830799 TCATAGGCACATTGTCATCCTAT 57.169 39.130 12.55 12.55 39.87 2.57
189 190 6.191657 TCATAGGCACATTGTCATCCTATT 57.808 37.500 14.46 3.93 37.87 1.73
190 191 6.604171 TCATAGGCACATTGTCATCCTATTT 58.396 36.000 14.46 0.65 37.87 1.40
191 192 7.062322 TCATAGGCACATTGTCATCCTATTTT 58.938 34.615 14.46 0.15 37.87 1.82
192 193 5.841957 AGGCACATTGTCATCCTATTTTC 57.158 39.130 1.17 0.00 0.00 2.29
193 194 4.646492 AGGCACATTGTCATCCTATTTTCC 59.354 41.667 1.17 0.00 0.00 3.13
194 195 4.402155 GGCACATTGTCATCCTATTTTCCA 59.598 41.667 0.00 0.00 0.00 3.53
195 196 5.343249 GCACATTGTCATCCTATTTTCCAC 58.657 41.667 0.00 0.00 0.00 4.02
196 197 5.679638 GCACATTGTCATCCTATTTTCCACC 60.680 44.000 0.00 0.00 0.00 4.61
197 198 5.418524 CACATTGTCATCCTATTTTCCACCA 59.581 40.000 0.00 0.00 0.00 4.17
198 199 6.097270 CACATTGTCATCCTATTTTCCACCAT 59.903 38.462 0.00 0.00 0.00 3.55
199 200 6.097270 ACATTGTCATCCTATTTTCCACCATG 59.903 38.462 0.00 0.00 0.00 3.66
200 201 3.953612 TGTCATCCTATTTTCCACCATGC 59.046 43.478 0.00 0.00 0.00 4.06
201 202 3.953612 GTCATCCTATTTTCCACCATGCA 59.046 43.478 0.00 0.00 0.00 3.96
202 203 3.953612 TCATCCTATTTTCCACCATGCAC 59.046 43.478 0.00 0.00 0.00 4.57
203 204 3.448093 TCCTATTTTCCACCATGCACA 57.552 42.857 0.00 0.00 0.00 4.57
204 205 3.772387 TCCTATTTTCCACCATGCACAA 58.228 40.909 0.00 0.00 0.00 3.33
205 206 4.352009 TCCTATTTTCCACCATGCACAAT 58.648 39.130 0.00 0.00 0.00 2.71
206 207 5.514169 TCCTATTTTCCACCATGCACAATA 58.486 37.500 0.00 0.00 0.00 1.90
207 208 5.954752 TCCTATTTTCCACCATGCACAATAA 59.045 36.000 0.00 0.00 0.00 1.40
208 209 6.610830 TCCTATTTTCCACCATGCACAATAAT 59.389 34.615 0.00 0.00 0.00 1.28
209 210 6.925165 CCTATTTTCCACCATGCACAATAATC 59.075 38.462 0.00 0.00 0.00 1.75
210 211 5.735285 TTTTCCACCATGCACAATAATCA 57.265 34.783 0.00 0.00 0.00 2.57
211 212 5.735285 TTTCCACCATGCACAATAATCAA 57.265 34.783 0.00 0.00 0.00 2.57
212 213 5.735285 TTCCACCATGCACAATAATCAAA 57.265 34.783 0.00 0.00 0.00 2.69
213 214 5.070770 TCCACCATGCACAATAATCAAAC 57.929 39.130 0.00 0.00 0.00 2.93
214 215 4.525874 TCCACCATGCACAATAATCAAACA 59.474 37.500 0.00 0.00 0.00 2.83
215 216 5.011431 TCCACCATGCACAATAATCAAACAA 59.989 36.000 0.00 0.00 0.00 2.83
216 217 5.875910 CCACCATGCACAATAATCAAACAAT 59.124 36.000 0.00 0.00 0.00 2.71
217 218 7.040494 CCACCATGCACAATAATCAAACAATA 58.960 34.615 0.00 0.00 0.00 1.90
218 219 7.711772 CCACCATGCACAATAATCAAACAATAT 59.288 33.333 0.00 0.00 0.00 1.28
219 220 9.747293 CACCATGCACAATAATCAAACAATATA 57.253 29.630 0.00 0.00 0.00 0.86
220 221 9.748708 ACCATGCACAATAATCAAACAATATAC 57.251 29.630 0.00 0.00 0.00 1.47
221 222 8.904712 CCATGCACAATAATCAAACAATATACG 58.095 33.333 0.00 0.00 0.00 3.06
222 223 9.662545 CATGCACAATAATCAAACAATATACGA 57.337 29.630 0.00 0.00 0.00 3.43
224 225 9.662545 TGCACAATAATCAAACAATATACGATG 57.337 29.630 0.00 0.00 0.00 3.84
225 226 9.877137 GCACAATAATCAAACAATATACGATGA 57.123 29.630 0.00 0.00 0.00 2.92
233 234 9.764363 ATCAAACAATATACGATGATGTACACT 57.236 29.630 0.00 0.00 0.00 3.55
237 238 8.744008 ACAATATACGATGATGTACACTAAGC 57.256 34.615 0.00 0.00 0.00 3.09
238 239 8.577296 ACAATATACGATGATGTACACTAAGCT 58.423 33.333 0.00 0.00 0.00 3.74
239 240 8.854312 CAATATACGATGATGTACACTAAGCTG 58.146 37.037 0.00 0.00 0.00 4.24
240 241 4.720649 ACGATGATGTACACTAAGCTGT 57.279 40.909 0.00 0.00 0.00 4.40
241 242 5.073311 ACGATGATGTACACTAAGCTGTT 57.927 39.130 0.00 0.00 0.00 3.16
242 243 4.864806 ACGATGATGTACACTAAGCTGTTG 59.135 41.667 0.00 0.00 0.00 3.33
243 244 5.102313 CGATGATGTACACTAAGCTGTTGA 58.898 41.667 0.00 0.00 0.00 3.18
244 245 5.750547 CGATGATGTACACTAAGCTGTTGAT 59.249 40.000 0.00 0.00 0.00 2.57
245 246 6.292008 CGATGATGTACACTAAGCTGTTGATG 60.292 42.308 0.00 0.00 0.00 3.07
246 247 4.631377 TGATGTACACTAAGCTGTTGATGC 59.369 41.667 0.00 0.00 0.00 3.91
247 248 2.993220 TGTACACTAAGCTGTTGATGCG 59.007 45.455 0.00 0.00 35.28 4.73
248 249 2.455674 ACACTAAGCTGTTGATGCGA 57.544 45.000 0.00 0.00 35.28 5.10
249 250 2.341257 ACACTAAGCTGTTGATGCGAG 58.659 47.619 0.00 0.00 35.28 5.03
250 251 1.061711 CACTAAGCTGTTGATGCGAGC 59.938 52.381 0.00 0.00 35.28 5.03
251 252 1.066573 ACTAAGCTGTTGATGCGAGCT 60.067 47.619 0.00 0.00 45.08 4.09
252 253 2.938354 AAGCTGTTGATGCGAGCTT 58.062 47.368 0.00 0.00 45.99 3.74
253 254 2.938354 AGCTGTTGATGCGAGCTTT 58.062 47.368 0.00 0.00 40.19 3.51
254 255 2.099141 AGCTGTTGATGCGAGCTTTA 57.901 45.000 0.00 0.00 40.19 1.85
255 256 2.636830 AGCTGTTGATGCGAGCTTTAT 58.363 42.857 0.00 0.00 40.19 1.40
256 257 2.353889 AGCTGTTGATGCGAGCTTTATG 59.646 45.455 0.00 0.00 40.19 1.90
257 258 2.096496 GCTGTTGATGCGAGCTTTATGT 59.904 45.455 0.00 0.00 0.00 2.29
258 259 3.309682 GCTGTTGATGCGAGCTTTATGTA 59.690 43.478 0.00 0.00 0.00 2.29
259 260 4.201812 GCTGTTGATGCGAGCTTTATGTAA 60.202 41.667 0.00 0.00 0.00 2.41
260 261 5.673568 GCTGTTGATGCGAGCTTTATGTAAA 60.674 40.000 0.00 0.00 0.00 2.01
261 262 5.627172 TGTTGATGCGAGCTTTATGTAAAC 58.373 37.500 0.00 0.00 0.00 2.01
262 263 5.180304 TGTTGATGCGAGCTTTATGTAAACA 59.820 36.000 0.00 0.00 0.00 2.83
263 264 5.871465 TGATGCGAGCTTTATGTAAACAA 57.129 34.783 0.00 0.00 0.00 2.83
264 265 5.627172 TGATGCGAGCTTTATGTAAACAAC 58.373 37.500 0.00 0.00 0.00 3.32
265 266 5.411361 TGATGCGAGCTTTATGTAAACAACT 59.589 36.000 0.00 0.00 0.00 3.16
266 267 5.277601 TGCGAGCTTTATGTAAACAACTC 57.722 39.130 0.00 0.00 0.00 3.01
267 268 4.143200 TGCGAGCTTTATGTAAACAACTCG 60.143 41.667 15.98 15.98 0.00 4.18
268 269 4.323751 CGAGCTTTATGTAAACAACTCGC 58.676 43.478 11.54 1.70 0.00 5.03
269 270 4.091509 CGAGCTTTATGTAAACAACTCGCT 59.908 41.667 11.54 5.28 0.00 4.93
270 271 5.389516 CGAGCTTTATGTAAACAACTCGCTT 60.390 40.000 11.54 0.00 0.00 4.68
271 272 6.183360 CGAGCTTTATGTAAACAACTCGCTTA 60.183 38.462 11.54 0.00 0.00 3.09
272 273 7.429636 AGCTTTATGTAAACAACTCGCTTAA 57.570 32.000 0.00 0.00 0.00 1.85
273 274 8.040716 AGCTTTATGTAAACAACTCGCTTAAT 57.959 30.769 0.00 0.00 0.00 1.40
274 275 7.962918 AGCTTTATGTAAACAACTCGCTTAATG 59.037 33.333 0.00 0.00 0.00 1.90
275 276 7.749126 GCTTTATGTAAACAACTCGCTTAATGT 59.251 33.333 0.00 0.00 0.00 2.71
276 277 9.607285 CTTTATGTAAACAACTCGCTTAATGTT 57.393 29.630 0.00 0.00 37.59 2.71
277 278 8.942669 TTATGTAAACAACTCGCTTAATGTTG 57.057 30.769 0.00 0.00 44.44 3.33
278 279 6.606234 TGTAAACAACTCGCTTAATGTTGA 57.394 33.333 11.30 0.00 42.35 3.18
279 280 7.197071 TGTAAACAACTCGCTTAATGTTGAT 57.803 32.000 11.30 0.00 42.35 2.57
280 281 7.295201 TGTAAACAACTCGCTTAATGTTGATC 58.705 34.615 11.30 0.00 42.35 2.92
281 282 6.560253 AAACAACTCGCTTAATGTTGATCT 57.440 33.333 11.30 0.00 42.35 2.75
282 283 5.786401 ACAACTCGCTTAATGTTGATCTC 57.214 39.130 11.30 0.00 42.35 2.75
283 284 4.327357 ACAACTCGCTTAATGTTGATCTCG 59.673 41.667 11.30 0.00 42.35 4.04
284 285 4.371855 ACTCGCTTAATGTTGATCTCGA 57.628 40.909 0.00 0.00 0.00 4.04
285 286 4.106197 ACTCGCTTAATGTTGATCTCGAC 58.894 43.478 0.00 0.00 0.00 4.20
286 287 4.104696 TCGCTTAATGTTGATCTCGACA 57.895 40.909 2.82 2.82 43.75 4.35
313 314 8.688747 TTTTTGAAATTGTGCCCATAAAGATT 57.311 26.923 0.00 0.00 0.00 2.40
314 315 8.688747 TTTTGAAATTGTGCCCATAAAGATTT 57.311 26.923 0.00 0.00 0.00 2.17
315 316 8.688747 TTTGAAATTGTGCCCATAAAGATTTT 57.311 26.923 0.00 0.00 0.00 1.82
316 317 8.688747 TTGAAATTGTGCCCATAAAGATTTTT 57.311 26.923 0.00 0.00 0.00 1.94
317 318 8.097078 TGAAATTGTGCCCATAAAGATTTTTG 57.903 30.769 0.00 0.00 0.00 2.44
318 319 7.174599 TGAAATTGTGCCCATAAAGATTTTTGG 59.825 33.333 7.57 7.57 38.50 3.28
319 320 5.815233 TTGTGCCCATAAAGATTTTTGGA 57.185 34.783 14.18 0.00 40.38 3.53
320 321 5.815233 TGTGCCCATAAAGATTTTTGGAA 57.185 34.783 14.18 2.52 40.38 3.53
321 322 6.179906 TGTGCCCATAAAGATTTTTGGAAA 57.820 33.333 14.18 2.24 40.38 3.13
322 323 5.994668 TGTGCCCATAAAGATTTTTGGAAAC 59.005 36.000 14.18 11.91 40.38 2.78
323 324 5.994668 GTGCCCATAAAGATTTTTGGAAACA 59.005 36.000 14.18 8.06 40.38 2.83
324 325 5.994668 TGCCCATAAAGATTTTTGGAAACAC 59.005 36.000 14.18 2.43 40.38 3.32
325 326 5.411361 GCCCATAAAGATTTTTGGAAACACC 59.589 40.000 14.18 0.00 40.38 4.16
326 327 6.744056 GCCCATAAAGATTTTTGGAAACACCT 60.744 38.462 14.18 0.00 40.38 4.00
327 328 7.223584 CCCATAAAGATTTTTGGAAACACCTT 58.776 34.615 14.18 0.00 40.38 3.50
328 329 7.173047 CCCATAAAGATTTTTGGAAACACCTTG 59.827 37.037 14.18 0.00 40.38 3.61
329 330 7.930865 CCATAAAGATTTTTGGAAACACCTTGA 59.069 33.333 8.59 0.00 40.38 3.02
330 331 8.981647 CATAAAGATTTTTGGAAACACCTTGAG 58.018 33.333 0.00 0.00 42.67 3.02
331 332 6.544928 AAGATTTTTGGAAACACCTTGAGT 57.455 33.333 0.00 0.00 42.67 3.41
332 333 7.654022 AAGATTTTTGGAAACACCTTGAGTA 57.346 32.000 0.00 0.00 42.67 2.59
333 334 7.039313 AGATTTTTGGAAACACCTTGAGTAC 57.961 36.000 0.00 0.00 42.67 2.73
334 335 6.605594 AGATTTTTGGAAACACCTTGAGTACA 59.394 34.615 0.00 0.00 42.67 2.90
335 336 5.570234 TTTTGGAAACACCTTGAGTACAC 57.430 39.130 0.00 0.00 42.67 2.90
336 337 4.497291 TTGGAAACACCTTGAGTACACT 57.503 40.909 0.00 0.00 42.67 3.55
337 338 4.497291 TGGAAACACCTTGAGTACACTT 57.503 40.909 0.00 0.00 39.86 3.16
338 339 4.448210 TGGAAACACCTTGAGTACACTTC 58.552 43.478 0.00 0.00 39.86 3.01
339 340 4.080807 TGGAAACACCTTGAGTACACTTCA 60.081 41.667 0.00 0.00 39.86 3.02
340 341 4.879545 GGAAACACCTTGAGTACACTTCAA 59.120 41.667 0.00 0.00 35.41 2.69
341 342 5.355910 GGAAACACCTTGAGTACACTTCAAA 59.644 40.000 0.00 0.00 35.41 2.69
342 343 6.127842 GGAAACACCTTGAGTACACTTCAAAA 60.128 38.462 0.00 0.00 35.41 2.44
343 344 6.827586 AACACCTTGAGTACACTTCAAAAA 57.172 33.333 0.00 0.00 0.00 1.94
344 345 7.404671 AACACCTTGAGTACACTTCAAAAAT 57.595 32.000 0.00 0.00 0.00 1.82
345 346 7.027778 ACACCTTGAGTACACTTCAAAAATC 57.972 36.000 0.00 0.00 0.00 2.17
346 347 6.601613 ACACCTTGAGTACACTTCAAAAATCA 59.398 34.615 0.00 0.00 0.00 2.57
347 348 7.285401 ACACCTTGAGTACACTTCAAAAATCAT 59.715 33.333 0.00 0.00 0.00 2.45
348 349 8.137437 CACCTTGAGTACACTTCAAAAATCATT 58.863 33.333 0.00 0.00 0.00 2.57
349 350 8.352942 ACCTTGAGTACACTTCAAAAATCATTC 58.647 33.333 0.00 0.00 0.00 2.67
350 351 8.352201 CCTTGAGTACACTTCAAAAATCATTCA 58.648 33.333 0.00 0.00 0.00 2.57
351 352 9.734620 CTTGAGTACACTTCAAAAATCATTCAA 57.265 29.630 0.00 0.00 0.00 2.69
353 354 9.515020 TGAGTACACTTCAAAAATCATTCAAAC 57.485 29.630 0.00 0.00 0.00 2.93
354 355 9.515020 GAGTACACTTCAAAAATCATTCAAACA 57.485 29.630 0.00 0.00 0.00 2.83
368 369 7.810766 TCATTCAAACATTATCTTTTTCCGC 57.189 32.000 0.00 0.00 0.00 5.54
369 370 7.374272 TCATTCAAACATTATCTTTTTCCGCA 58.626 30.769 0.00 0.00 0.00 5.69
370 371 7.869937 TCATTCAAACATTATCTTTTTCCGCAA 59.130 29.630 0.00 0.00 0.00 4.85
371 372 7.401484 TTCAAACATTATCTTTTTCCGCAAC 57.599 32.000 0.00 0.00 0.00 4.17
372 373 6.507900 TCAAACATTATCTTTTTCCGCAACA 58.492 32.000 0.00 0.00 0.00 3.33
373 374 7.151308 TCAAACATTATCTTTTTCCGCAACAT 58.849 30.769 0.00 0.00 0.00 2.71
374 375 7.328249 TCAAACATTATCTTTTTCCGCAACATC 59.672 33.333 0.00 0.00 0.00 3.06
375 376 6.266168 ACATTATCTTTTTCCGCAACATCA 57.734 33.333 0.00 0.00 0.00 3.07
376 377 6.092748 ACATTATCTTTTTCCGCAACATCAC 58.907 36.000 0.00 0.00 0.00 3.06
377 378 5.957842 TTATCTTTTTCCGCAACATCACT 57.042 34.783 0.00 0.00 0.00 3.41
378 379 4.853924 ATCTTTTTCCGCAACATCACTT 57.146 36.364 0.00 0.00 0.00 3.16
379 380 5.957842 ATCTTTTTCCGCAACATCACTTA 57.042 34.783 0.00 0.00 0.00 2.24
380 381 5.957842 TCTTTTTCCGCAACATCACTTAT 57.042 34.783 0.00 0.00 0.00 1.73
381 382 5.938322 TCTTTTTCCGCAACATCACTTATC 58.062 37.500 0.00 0.00 0.00 1.75
382 383 5.471797 TCTTTTTCCGCAACATCACTTATCA 59.528 36.000 0.00 0.00 0.00 2.15
383 384 5.895636 TTTTCCGCAACATCACTTATCAT 57.104 34.783 0.00 0.00 0.00 2.45
384 385 4.880886 TTCCGCAACATCACTTATCATG 57.119 40.909 0.00 0.00 0.00 3.07
385 386 3.872696 TCCGCAACATCACTTATCATGT 58.127 40.909 0.00 0.00 34.58 3.21
386 387 4.260985 TCCGCAACATCACTTATCATGTT 58.739 39.130 0.00 0.00 42.73 2.71
387 388 5.423886 TCCGCAACATCACTTATCATGTTA 58.576 37.500 0.00 0.00 40.52 2.41
388 389 6.054941 TCCGCAACATCACTTATCATGTTAT 58.945 36.000 0.00 0.00 40.52 1.89
389 390 6.542005 TCCGCAACATCACTTATCATGTTATT 59.458 34.615 0.00 0.00 40.52 1.40
390 391 7.066887 TCCGCAACATCACTTATCATGTTATTT 59.933 33.333 0.00 0.00 40.52 1.40
391 392 7.166307 CCGCAACATCACTTATCATGTTATTTG 59.834 37.037 0.00 0.00 40.52 2.32
392 393 7.697710 CGCAACATCACTTATCATGTTATTTGT 59.302 33.333 0.00 0.00 40.52 2.83
393 394 9.357652 GCAACATCACTTATCATGTTATTTGTT 57.642 29.630 0.00 0.00 40.52 2.83
396 397 9.844790 ACATCACTTATCATGTTATTTGTTGTG 57.155 29.630 0.00 0.00 28.27 3.33
397 398 9.844790 CATCACTTATCATGTTATTTGTTGTGT 57.155 29.630 0.00 0.00 0.00 3.72
398 399 9.844790 ATCACTTATCATGTTATTTGTTGTGTG 57.155 29.630 0.00 0.00 0.00 3.82
399 400 9.061435 TCACTTATCATGTTATTTGTTGTGTGA 57.939 29.630 0.00 0.00 0.00 3.58
400 401 9.676195 CACTTATCATGTTATTTGTTGTGTGAA 57.324 29.630 0.00 0.00 0.00 3.18
401 402 9.897744 ACTTATCATGTTATTTGTTGTGTGAAG 57.102 29.630 0.00 0.00 0.00 3.02
405 406 9.985730 ATCATGTTATTTGTTGTGTGAAGATTT 57.014 25.926 0.00 0.00 0.00 2.17
406 407 9.462174 TCATGTTATTTGTTGTGTGAAGATTTC 57.538 29.630 0.00 0.00 0.00 2.17
407 408 9.247126 CATGTTATTTGTTGTGTGAAGATTTCA 57.753 29.630 0.00 0.00 37.33 2.69
408 409 9.814899 ATGTTATTTGTTGTGTGAAGATTTCAA 57.185 25.926 0.00 0.00 42.15 2.69
409 410 9.299963 TGTTATTTGTTGTGTGAAGATTTCAAG 57.700 29.630 0.00 0.00 42.15 3.02
410 411 8.755018 GTTATTTGTTGTGTGAAGATTTCAAGG 58.245 33.333 0.00 0.00 42.15 3.61
411 412 4.916983 TGTTGTGTGAAGATTTCAAGGG 57.083 40.909 0.00 0.00 42.15 3.95
412 413 4.531854 TGTTGTGTGAAGATTTCAAGGGA 58.468 39.130 0.00 0.00 42.15 4.20
413 414 5.139727 TGTTGTGTGAAGATTTCAAGGGAT 58.860 37.500 0.00 0.00 42.15 3.85
414 415 5.598005 TGTTGTGTGAAGATTTCAAGGGATT 59.402 36.000 0.00 0.00 42.15 3.01
415 416 6.098124 TGTTGTGTGAAGATTTCAAGGGATTT 59.902 34.615 0.00 0.00 42.15 2.17
416 417 6.088016 TGTGTGAAGATTTCAAGGGATTTG 57.912 37.500 0.00 0.00 42.15 2.32
417 418 5.598005 TGTGTGAAGATTTCAAGGGATTTGT 59.402 36.000 0.00 0.00 42.15 2.83
418 419 6.098124 TGTGTGAAGATTTCAAGGGATTTGTT 59.902 34.615 0.00 0.00 42.15 2.83
419 420 6.421801 GTGTGAAGATTTCAAGGGATTTGTTG 59.578 38.462 0.00 0.00 42.15 3.33
420 421 6.323482 TGTGAAGATTTCAAGGGATTTGTTGA 59.677 34.615 0.00 0.00 42.15 3.18
421 422 7.015487 TGTGAAGATTTCAAGGGATTTGTTGAT 59.985 33.333 0.00 0.00 42.15 2.57
422 423 7.330208 GTGAAGATTTCAAGGGATTTGTTGATG 59.670 37.037 0.00 0.00 42.15 3.07
423 424 6.923199 AGATTTCAAGGGATTTGTTGATGT 57.077 33.333 0.00 0.00 38.01 3.06
424 425 6.928520 AGATTTCAAGGGATTTGTTGATGTC 58.071 36.000 0.00 0.00 38.01 3.06
425 426 4.764679 TTCAAGGGATTTGTTGATGTCG 57.235 40.909 0.00 0.00 38.01 4.35
426 427 4.014569 TCAAGGGATTTGTTGATGTCGA 57.985 40.909 0.00 0.00 38.01 4.20
427 428 3.751175 TCAAGGGATTTGTTGATGTCGAC 59.249 43.478 9.11 9.11 38.01 4.20
428 429 2.346803 AGGGATTTGTTGATGTCGACG 58.653 47.619 11.62 0.00 32.90 5.12
429 430 2.028476 AGGGATTTGTTGATGTCGACGA 60.028 45.455 11.62 0.00 32.90 4.20
430 431 2.348666 GGGATTTGTTGATGTCGACGAG 59.651 50.000 11.62 0.00 32.90 4.18
431 432 2.993899 GGATTTGTTGATGTCGACGAGT 59.006 45.455 11.62 0.00 32.90 4.18
432 433 3.181530 GGATTTGTTGATGTCGACGAGTG 60.182 47.826 11.62 0.00 32.90 3.51
433 434 1.778334 TTGTTGATGTCGACGAGTGG 58.222 50.000 11.62 0.00 32.90 4.00
434 435 0.038618 TGTTGATGTCGACGAGTGGG 60.039 55.000 11.62 0.00 32.90 4.61
435 436 0.038526 GTTGATGTCGACGAGTGGGT 60.039 55.000 11.62 0.00 0.00 4.51
436 437 0.038618 TTGATGTCGACGAGTGGGTG 60.039 55.000 11.62 0.00 0.00 4.61
437 438 1.176619 TGATGTCGACGAGTGGGTGT 61.177 55.000 11.62 0.00 0.00 4.16
438 439 0.806868 GATGTCGACGAGTGGGTGTA 59.193 55.000 11.62 0.00 0.00 2.90
439 440 1.404391 GATGTCGACGAGTGGGTGTAT 59.596 52.381 11.62 0.00 0.00 2.29
440 441 0.524414 TGTCGACGAGTGGGTGTATG 59.476 55.000 11.62 0.00 0.00 2.39
441 442 0.806868 GTCGACGAGTGGGTGTATGA 59.193 55.000 0.00 0.00 0.00 2.15
442 443 1.092348 TCGACGAGTGGGTGTATGAG 58.908 55.000 0.00 0.00 0.00 2.90
443 444 1.092348 CGACGAGTGGGTGTATGAGA 58.908 55.000 0.00 0.00 0.00 3.27
444 445 1.064208 CGACGAGTGGGTGTATGAGAG 59.936 57.143 0.00 0.00 0.00 3.20
445 446 1.405821 GACGAGTGGGTGTATGAGAGG 59.594 57.143 0.00 0.00 0.00 3.69
446 447 1.272536 ACGAGTGGGTGTATGAGAGGT 60.273 52.381 0.00 0.00 0.00 3.85
447 448 1.135139 CGAGTGGGTGTATGAGAGGTG 59.865 57.143 0.00 0.00 0.00 4.00
448 449 2.457598 GAGTGGGTGTATGAGAGGTGA 58.542 52.381 0.00 0.00 0.00 4.02
449 450 3.034635 GAGTGGGTGTATGAGAGGTGAT 58.965 50.000 0.00 0.00 0.00 3.06
450 451 3.452627 GAGTGGGTGTATGAGAGGTGATT 59.547 47.826 0.00 0.00 0.00 2.57
451 452 3.846588 AGTGGGTGTATGAGAGGTGATTT 59.153 43.478 0.00 0.00 0.00 2.17
452 453 4.289672 AGTGGGTGTATGAGAGGTGATTTT 59.710 41.667 0.00 0.00 0.00 1.82
453 454 5.010282 GTGGGTGTATGAGAGGTGATTTTT 58.990 41.667 0.00 0.00 0.00 1.94
471 472 3.430333 TTTTCTTTCTCCCGTTGCAAC 57.570 42.857 19.89 19.89 0.00 4.17
480 481 4.340019 CGTTGCAACGCATGGGCA 62.340 61.111 35.89 0.00 46.06 5.36
481 482 2.262292 GTTGCAACGCATGGGCAT 59.738 55.556 14.90 0.00 38.76 4.40
482 483 2.095847 GTTGCAACGCATGGGCATG 61.096 57.895 14.90 10.43 38.76 4.06
483 484 2.572149 TTGCAACGCATGGGCATGT 61.572 52.632 10.10 0.00 38.76 3.21
484 485 2.097201 TTGCAACGCATGGGCATGTT 62.097 50.000 10.10 0.00 38.76 2.71
485 486 1.374505 GCAACGCATGGGCATGTTT 60.375 52.632 10.10 0.00 40.80 2.83
486 487 1.628447 GCAACGCATGGGCATGTTTG 61.628 55.000 10.10 7.60 40.80 2.93
539 540 5.828328 ACCTAATTGCTTAATTGGGCTCTAC 59.172 40.000 13.07 0.00 42.49 2.59
542 543 3.951563 TGCTTAATTGGGCTCTACCAT 57.048 42.857 6.15 0.00 40.91 3.55
554 555 7.639113 TGGGCTCTACCATTTTAAAATAGTG 57.361 36.000 18.56 12.25 42.05 2.74
556 558 6.096282 GGGCTCTACCATTTTAAAATAGTGCA 59.904 38.462 23.96 11.93 42.05 4.57
618 620 4.458989 TCCAAATCAATTCAAACTCCTCCG 59.541 41.667 0.00 0.00 0.00 4.63
632 634 3.211045 CTCCTCCGAAACTTTTTGTGGA 58.789 45.455 0.00 0.00 0.00 4.02
633 635 3.211045 TCCTCCGAAACTTTTTGTGGAG 58.789 45.455 8.57 8.57 42.07 3.86
666 668 2.427812 TGTAATGCATTCATGTGGCCAG 59.572 45.455 16.86 0.00 32.23 4.85
694 696 6.493115 TCCACATTCTAAAAAGAGCAATTGGA 59.507 34.615 7.72 0.00 0.00 3.53
810 815 2.158355 GGCCTATCCTACTACCAGGTCA 60.158 54.545 0.00 0.00 36.99 4.02
865 870 4.807039 GGCGGCCGTACACGATGT 62.807 66.667 28.70 0.00 43.02 3.06
966 971 1.925959 CAAATCCCCTTTCCCCTCTCT 59.074 52.381 0.00 0.00 0.00 3.10
1071 1076 2.705821 CGTCTTCTGGAGCTCCGCT 61.706 63.158 27.43 0.00 43.88 5.52
1138 1143 1.815003 CGCATCATCGCCCACTTCA 60.815 57.895 0.00 0.00 0.00 3.02
1229 1234 2.591429 CCGCTGTGTGCCTCAACA 60.591 61.111 0.00 0.00 38.78 3.33
1242 1247 2.617532 GCCTCAACATGAGCTCTCCTTT 60.618 50.000 16.19 0.00 42.98 3.11
1268 1274 2.625883 CCCCTATTTTCCCCCTTTGGTC 60.626 54.545 0.00 0.00 0.00 4.02
1283 1289 0.968901 TGGTCCGTCGCCTAAGTCAT 60.969 55.000 0.00 0.00 0.00 3.06
1353 1359 2.591753 CATGATGGTCGCACCCCT 59.408 61.111 0.00 0.00 37.50 4.79
1411 1417 1.986757 GCTCACTCCCCTGCTCTGA 60.987 63.158 0.00 0.00 0.00 3.27
1423 1429 2.354906 CCTGCTCTGATGCTTCTCTTGT 60.355 50.000 0.88 0.00 0.00 3.16
1442 1448 4.830765 GCTGATACACCGCCGCCA 62.831 66.667 0.00 0.00 0.00 5.69
1455 1461 4.332637 CGCCATATGCCTTGCCGC 62.333 66.667 0.00 0.00 36.24 6.53
1456 1462 2.908940 GCCATATGCCTTGCCGCT 60.909 61.111 0.00 0.00 0.00 5.52
1457 1463 3.036577 CCATATGCCTTGCCGCTG 58.963 61.111 0.00 0.00 0.00 5.18
1458 1464 2.333938 CATATGCCTTGCCGCTGC 59.666 61.111 0.00 0.00 38.26 5.25
1459 1465 2.191513 CATATGCCTTGCCGCTGCT 61.192 57.895 0.70 0.00 38.71 4.24
1460 1466 0.886043 CATATGCCTTGCCGCTGCTA 60.886 55.000 0.70 0.00 38.71 3.49
1461 1467 0.886490 ATATGCCTTGCCGCTGCTAC 60.886 55.000 0.70 0.00 38.71 3.58
1479 1485 1.808799 CCTGCTACGAGCTGTGCTG 60.809 63.158 0.00 1.60 42.97 4.41
1490 1496 2.967473 CTGTGCTGCTGCTGTCTGC 61.967 63.158 17.00 0.00 40.48 4.26
1497 1503 2.357881 CTGCTGTCTGCTTCCGCA 60.358 61.111 3.20 0.00 45.60 5.69
1542 1548 4.426112 CTCGACCGCTCTGCTGCA 62.426 66.667 0.88 0.88 0.00 4.41
1579 1585 2.436109 GCCCTCCTCTGCCAACAA 59.564 61.111 0.00 0.00 0.00 2.83
1588 1594 2.664851 TGCCAACAACCTCGCTCG 60.665 61.111 0.00 0.00 0.00 5.03
1591 1597 2.671177 CCAACAACCTCGCTCGCAG 61.671 63.158 0.00 0.00 0.00 5.18
1643 1649 2.181777 CGCTTCTGTCGCCTGCTA 59.818 61.111 0.00 0.00 0.00 3.49
1656 1662 1.601171 CTGCTACCCTTGCTGCTCT 59.399 57.895 0.00 0.00 0.00 4.09
1665 1671 3.486905 TTGCTGCTCTGCCTGCTGT 62.487 57.895 0.00 0.00 0.00 4.40
1667 1673 2.979197 GCTGCTCTGCCTGCTGTTG 61.979 63.158 0.00 0.00 0.00 3.33
1675 1681 1.751927 GCCTGCTGTTGGCTATGCT 60.752 57.895 0.00 0.00 46.38 3.79
1677 1683 1.434622 CCTGCTGTTGGCTATGCTCG 61.435 60.000 0.00 0.00 42.39 5.03
1686 1692 4.598894 CTATGCTCGCCGCTGCCT 62.599 66.667 0.00 0.00 40.11 4.75
1716 1722 2.329339 GCGCAGATTTCCATCGCC 59.671 61.111 0.30 0.00 39.91 5.54
1747 1753 2.439156 GCCCACCTGCATCACCTC 60.439 66.667 0.00 0.00 0.00 3.85
1751 1757 4.457496 ACCTGCATCACCTCCGCG 62.457 66.667 0.00 0.00 0.00 6.46
1771 1778 3.222855 CTGCCTCTCCTCGCCGAT 61.223 66.667 0.00 0.00 0.00 4.18
1776 1783 3.781770 CTCTCCTCGCCGATGCACC 62.782 68.421 0.00 0.00 37.32 5.01
1857 1864 4.824515 CCCCGCTCGACTCCTCCT 62.825 72.222 0.00 0.00 0.00 3.69
1874 1881 2.038975 TGGCCTACCGCTCCTCTT 59.961 61.111 3.32 0.00 39.70 2.85
1882 1889 1.153745 CCGCTCCTCTTCTTCCACG 60.154 63.158 0.00 0.00 0.00 4.94
1885 1893 1.219393 CTCCTCTTCTTCCACGCCC 59.781 63.158 0.00 0.00 0.00 6.13
1954 1962 3.485346 TTCAACCCCGCTCACCACC 62.485 63.158 0.00 0.00 0.00 4.61
1955 1963 4.263572 CAACCCCGCTCACCACCA 62.264 66.667 0.00 0.00 0.00 4.17
2016 2037 3.105782 CGACGCTCGCAGCTCAAA 61.106 61.111 6.58 0.00 39.60 2.69
2028 2049 2.559840 CTCAAAGCGCCACTGCTG 59.440 61.111 2.29 0.00 46.60 4.41
2050 2071 2.525381 CCCGCCTCTGCTCCCTAT 60.525 66.667 0.00 0.00 34.43 2.57
2054 2075 2.739784 CCTCTGCTCCCTATGCCG 59.260 66.667 0.00 0.00 0.00 5.69
2193 2214 2.202395 GCACACCTGGTTGCCACAT 61.202 57.895 17.65 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 8.157476 GGAATCAACATCCACTATAGTACCAAT 58.843 37.037 4.74 0.00 36.92 3.16
16 17 7.347222 AGGAATCAACATCCACTATAGTACCAA 59.653 37.037 4.74 0.00 39.55 3.67
17 18 6.844388 AGGAATCAACATCCACTATAGTACCA 59.156 38.462 4.74 0.00 39.55 3.25
18 19 7.304497 AGGAATCAACATCCACTATAGTACC 57.696 40.000 4.74 0.00 39.55 3.34
19 20 8.305317 GGTAGGAATCAACATCCACTATAGTAC 58.695 40.741 4.74 0.00 39.55 2.73
20 21 8.008332 TGGTAGGAATCAACATCCACTATAGTA 58.992 37.037 4.74 0.00 39.55 1.82
21 22 6.844388 TGGTAGGAATCAACATCCACTATAGT 59.156 38.462 0.00 0.00 39.55 2.12
22 23 7.303182 TGGTAGGAATCAACATCCACTATAG 57.697 40.000 0.00 0.00 39.55 1.31
23 24 6.270000 CCTGGTAGGAATCAACATCCACTATA 59.730 42.308 0.00 0.00 37.67 1.31
24 25 5.072329 CCTGGTAGGAATCAACATCCACTAT 59.928 44.000 0.00 0.00 37.67 2.12
25 26 4.408921 CCTGGTAGGAATCAACATCCACTA 59.591 45.833 0.00 0.00 37.67 2.74
26 27 3.200825 CCTGGTAGGAATCAACATCCACT 59.799 47.826 0.00 0.00 37.67 4.00
27 28 3.054361 ACCTGGTAGGAATCAACATCCAC 60.054 47.826 0.00 0.00 37.67 4.02
28 29 3.189606 ACCTGGTAGGAATCAACATCCA 58.810 45.455 0.00 0.00 37.67 3.41
29 30 3.933861 ACCTGGTAGGAATCAACATCC 57.066 47.619 0.00 0.00 37.67 3.51
30 31 4.163458 TGGTACCTGGTAGGAATCAACATC 59.837 45.833 14.36 0.00 37.67 3.06
31 32 4.108570 TGGTACCTGGTAGGAATCAACAT 58.891 43.478 14.36 0.00 37.67 2.71
32 33 3.522759 TGGTACCTGGTAGGAATCAACA 58.477 45.455 14.36 0.00 37.67 3.33
33 34 4.772886 ATGGTACCTGGTAGGAATCAAC 57.227 45.455 14.36 0.00 37.67 3.18
34 35 5.221843 GCATATGGTACCTGGTAGGAATCAA 60.222 44.000 14.36 0.00 37.67 2.57
35 36 4.286032 GCATATGGTACCTGGTAGGAATCA 59.714 45.833 14.36 0.00 37.67 2.57
36 37 4.532521 AGCATATGGTACCTGGTAGGAATC 59.467 45.833 14.36 0.00 37.67 2.52
37 38 4.503398 AGCATATGGTACCTGGTAGGAAT 58.497 43.478 14.36 4.16 37.67 3.01
38 39 3.936461 AGCATATGGTACCTGGTAGGAA 58.064 45.455 14.36 0.00 37.67 3.36
39 40 3.630625 AGCATATGGTACCTGGTAGGA 57.369 47.619 14.36 0.00 37.67 2.94
40 41 5.280011 CCTTTAGCATATGGTACCTGGTAGG 60.280 48.000 14.06 9.43 42.49 3.18
41 42 5.307196 ACCTTTAGCATATGGTACCTGGTAG 59.693 44.000 21.31 4.31 0.00 3.18
42 43 5.221303 ACCTTTAGCATATGGTACCTGGTA 58.779 41.667 21.31 10.27 0.00 3.25
43 44 4.045022 ACCTTTAGCATATGGTACCTGGT 58.955 43.478 14.06 17.07 0.00 4.00
44 45 4.706842 ACCTTTAGCATATGGTACCTGG 57.293 45.455 14.06 16.53 0.00 4.45
45 46 7.450074 TCATAACCTTTAGCATATGGTACCTG 58.550 38.462 14.06 4.21 29.56 4.00
46 47 7.626999 TCATAACCTTTAGCATATGGTACCT 57.373 36.000 14.06 1.08 29.56 3.08
47 48 9.601217 CTATCATAACCTTTAGCATATGGTACC 57.399 37.037 14.06 4.43 29.56 3.34
48 49 9.601217 CCTATCATAACCTTTAGCATATGGTAC 57.399 37.037 14.06 0.00 29.56 3.34
49 50 9.333961 ACCTATCATAACCTTTAGCATATGGTA 57.666 33.333 10.55 10.55 29.56 3.25
50 51 8.219660 ACCTATCATAACCTTTAGCATATGGT 57.780 34.615 12.78 12.78 30.66 3.55
51 52 9.601217 GTACCTATCATAACCTTTAGCATATGG 57.399 37.037 4.56 0.00 0.00 2.74
56 57 9.375974 ACTATGTACCTATCATAACCTTTAGCA 57.624 33.333 0.00 0.00 0.00 3.49
57 58 9.857957 GACTATGTACCTATCATAACCTTTAGC 57.142 37.037 0.00 0.00 0.00 3.09
61 62 9.036980 GGATGACTATGTACCTATCATAACCTT 57.963 37.037 0.00 0.00 30.23 3.50
62 63 8.402683 AGGATGACTATGTACCTATCATAACCT 58.597 37.037 0.00 0.00 30.23 3.50
63 64 8.596781 AGGATGACTATGTACCTATCATAACC 57.403 38.462 0.00 0.00 30.23 2.85
70 71 9.615660 TGGAAAATAGGATGACTATGTACCTAT 57.384 33.333 0.00 0.00 41.54 2.57
71 72 9.442062 TTGGAAAATAGGATGACTATGTACCTA 57.558 33.333 0.00 0.00 41.54 3.08
72 73 7.931015 TGGAAAATAGGATGACTATGTACCT 57.069 36.000 0.00 0.00 41.54 3.08
73 74 9.003658 CATTGGAAAATAGGATGACTATGTACC 57.996 37.037 0.00 0.00 41.54 3.34
74 75 9.561069 ACATTGGAAAATAGGATGACTATGTAC 57.439 33.333 0.00 0.00 41.54 2.90
75 76 9.559732 CACATTGGAAAATAGGATGACTATGTA 57.440 33.333 0.00 0.00 41.54 2.29
76 77 7.013655 GCACATTGGAAAATAGGATGACTATGT 59.986 37.037 0.00 0.00 41.54 2.29
77 78 7.013559 TGCACATTGGAAAATAGGATGACTATG 59.986 37.037 0.00 0.00 41.54 2.23
78 79 7.013655 GTGCACATTGGAAAATAGGATGACTAT 59.986 37.037 13.17 0.00 44.26 2.12
79 80 6.318648 GTGCACATTGGAAAATAGGATGACTA 59.681 38.462 13.17 0.00 35.80 2.59
80 81 5.126061 GTGCACATTGGAAAATAGGATGACT 59.874 40.000 13.17 0.00 0.00 3.41
81 82 5.105797 TGTGCACATTGGAAAATAGGATGAC 60.106 40.000 17.42 0.00 0.00 3.06
82 83 5.015515 TGTGCACATTGGAAAATAGGATGA 58.984 37.500 17.42 0.00 0.00 2.92
83 84 5.327616 TGTGCACATTGGAAAATAGGATG 57.672 39.130 17.42 0.00 0.00 3.51
84 85 5.999205 TTGTGCACATTGGAAAATAGGAT 57.001 34.783 22.39 0.00 0.00 3.24
85 86 5.999205 ATTGTGCACATTGGAAAATAGGA 57.001 34.783 22.39 0.16 0.00 2.94
86 87 7.980662 TGATTATTGTGCACATTGGAAAATAGG 59.019 33.333 22.39 0.00 31.06 2.57
87 88 8.929827 TGATTATTGTGCACATTGGAAAATAG 57.070 30.769 22.39 0.00 31.06 1.73
88 89 9.149225 GTTGATTATTGTGCACATTGGAAAATA 57.851 29.630 22.39 10.62 28.33 1.40
89 90 7.119553 GGTTGATTATTGTGCACATTGGAAAAT 59.880 33.333 22.39 13.00 30.49 1.82
90 91 6.426328 GGTTGATTATTGTGCACATTGGAAAA 59.574 34.615 22.39 8.63 0.00 2.29
91 92 5.931146 GGTTGATTATTGTGCACATTGGAAA 59.069 36.000 22.39 8.99 0.00 3.13
92 93 5.011431 TGGTTGATTATTGTGCACATTGGAA 59.989 36.000 22.39 12.49 0.00 3.53
93 94 4.525874 TGGTTGATTATTGTGCACATTGGA 59.474 37.500 22.39 5.78 0.00 3.53
94 95 4.818642 TGGTTGATTATTGTGCACATTGG 58.181 39.130 22.39 0.00 0.00 3.16
95 96 6.971527 ATTGGTTGATTATTGTGCACATTG 57.028 33.333 22.39 0.00 0.00 2.82
97 98 9.917129 CATATATTGGTTGATTATTGTGCACAT 57.083 29.630 22.39 13.21 0.00 3.21
98 99 9.129532 TCATATATTGGTTGATTATTGTGCACA 57.870 29.630 17.42 17.42 0.00 4.57
113 114 9.071276 GGAGTCAACATTTCATCATATATTGGT 57.929 33.333 0.00 0.00 0.00 3.67
114 115 9.293404 AGGAGTCAACATTTCATCATATATTGG 57.707 33.333 0.00 0.00 0.00 3.16
117 118 9.950496 GGTAGGAGTCAACATTTCATCATATAT 57.050 33.333 0.00 0.00 0.00 0.86
118 119 8.088365 CGGTAGGAGTCAACATTTCATCATATA 58.912 37.037 0.00 0.00 0.00 0.86
119 120 6.931281 CGGTAGGAGTCAACATTTCATCATAT 59.069 38.462 0.00 0.00 0.00 1.78
120 121 6.280643 CGGTAGGAGTCAACATTTCATCATA 58.719 40.000 0.00 0.00 0.00 2.15
121 122 5.118990 CGGTAGGAGTCAACATTTCATCAT 58.881 41.667 0.00 0.00 0.00 2.45
122 123 4.503910 CGGTAGGAGTCAACATTTCATCA 58.496 43.478 0.00 0.00 0.00 3.07
123 124 3.871594 CCGGTAGGAGTCAACATTTCATC 59.128 47.826 0.00 0.00 41.02 2.92
124 125 3.873910 CCGGTAGGAGTCAACATTTCAT 58.126 45.455 0.00 0.00 41.02 2.57
125 126 2.614481 GCCGGTAGGAGTCAACATTTCA 60.614 50.000 1.90 0.00 41.02 2.69
126 127 2.007608 GCCGGTAGGAGTCAACATTTC 58.992 52.381 1.90 0.00 41.02 2.17
127 128 1.628846 AGCCGGTAGGAGTCAACATTT 59.371 47.619 1.90 0.00 41.02 2.32
128 129 1.276622 AGCCGGTAGGAGTCAACATT 58.723 50.000 1.90 0.00 41.02 2.71
129 130 1.755380 GTAGCCGGTAGGAGTCAACAT 59.245 52.381 1.90 0.00 41.02 2.71
130 131 1.180029 GTAGCCGGTAGGAGTCAACA 58.820 55.000 1.90 0.00 41.02 3.33
131 132 0.459078 GGTAGCCGGTAGGAGTCAAC 59.541 60.000 1.90 0.00 41.02 3.18
132 133 0.040058 TGGTAGCCGGTAGGAGTCAA 59.960 55.000 1.90 0.00 41.02 3.18
133 134 0.260816 ATGGTAGCCGGTAGGAGTCA 59.739 55.000 1.90 0.00 41.02 3.41
134 135 2.283145 TATGGTAGCCGGTAGGAGTC 57.717 55.000 1.90 0.00 41.02 3.36
135 136 2.526432 CATATGGTAGCCGGTAGGAGT 58.474 52.381 1.90 0.00 41.02 3.85
136 137 1.204941 GCATATGGTAGCCGGTAGGAG 59.795 57.143 1.90 0.00 41.02 3.69
137 138 1.203137 AGCATATGGTAGCCGGTAGGA 60.203 52.381 5.40 0.00 41.02 2.94
138 139 1.267121 AGCATATGGTAGCCGGTAGG 58.733 55.000 5.40 0.00 41.62 3.18
139 140 4.495422 CTTTAGCATATGGTAGCCGGTAG 58.505 47.826 13.92 4.12 0.00 3.18
140 141 3.259876 CCTTTAGCATATGGTAGCCGGTA 59.740 47.826 13.92 0.00 0.00 4.02
141 142 2.038557 CCTTTAGCATATGGTAGCCGGT 59.961 50.000 13.92 0.00 0.00 5.28
142 143 2.038557 ACCTTTAGCATATGGTAGCCGG 59.961 50.000 13.92 16.07 0.00 6.13
143 144 3.402628 ACCTTTAGCATATGGTAGCCG 57.597 47.619 13.92 8.25 0.00 5.52
144 145 6.472887 TGATAACCTTTAGCATATGGTAGCC 58.527 40.000 13.92 0.00 29.56 3.93
145 146 9.319143 CTATGATAACCTTTAGCATATGGTAGC 57.681 37.037 13.92 0.00 29.56 3.58
146 147 9.823647 CCTATGATAACCTTTAGCATATGGTAG 57.176 37.037 13.92 6.26 29.56 3.18
147 148 8.265055 GCCTATGATAACCTTTAGCATATGGTA 58.735 37.037 10.55 10.55 29.56 3.25
148 149 7.112779 GCCTATGATAACCTTTAGCATATGGT 58.887 38.462 12.78 12.78 30.66 3.55
149 150 7.066284 GTGCCTATGATAACCTTTAGCATATGG 59.934 40.741 4.56 8.73 0.00 2.74
150 151 7.607607 TGTGCCTATGATAACCTTTAGCATATG 59.392 37.037 0.00 0.00 0.00 1.78
151 152 7.689299 TGTGCCTATGATAACCTTTAGCATAT 58.311 34.615 4.77 0.00 0.00 1.78
152 153 7.073457 TGTGCCTATGATAACCTTTAGCATA 57.927 36.000 4.36 4.36 0.00 3.14
153 154 5.940617 TGTGCCTATGATAACCTTTAGCAT 58.059 37.500 2.55 2.55 0.00 3.79
154 155 5.366482 TGTGCCTATGATAACCTTTAGCA 57.634 39.130 0.00 0.00 0.00 3.49
155 156 6.263168 ACAATGTGCCTATGATAACCTTTAGC 59.737 38.462 0.00 0.00 0.00 3.09
156 157 7.498900 TGACAATGTGCCTATGATAACCTTTAG 59.501 37.037 0.00 0.00 0.00 1.85
157 158 7.342581 TGACAATGTGCCTATGATAACCTTTA 58.657 34.615 0.00 0.00 0.00 1.85
158 159 6.186957 TGACAATGTGCCTATGATAACCTTT 58.813 36.000 0.00 0.00 0.00 3.11
159 160 5.754782 TGACAATGTGCCTATGATAACCTT 58.245 37.500 0.00 0.00 0.00 3.50
160 161 5.372343 TGACAATGTGCCTATGATAACCT 57.628 39.130 0.00 0.00 0.00 3.50
161 162 5.182001 GGATGACAATGTGCCTATGATAACC 59.818 44.000 0.00 0.00 0.00 2.85
162 163 6.000219 AGGATGACAATGTGCCTATGATAAC 59.000 40.000 0.00 0.00 0.00 1.89
163 164 6.191657 AGGATGACAATGTGCCTATGATAA 57.808 37.500 0.00 0.00 0.00 1.75
164 165 5.830799 AGGATGACAATGTGCCTATGATA 57.169 39.130 0.00 0.00 0.00 2.15
165 166 4.719026 AGGATGACAATGTGCCTATGAT 57.281 40.909 0.00 0.00 0.00 2.45
166 167 5.830799 ATAGGATGACAATGTGCCTATGA 57.169 39.130 14.42 0.00 39.72 2.15
167 168 6.889301 AAATAGGATGACAATGTGCCTATG 57.111 37.500 15.36 0.00 40.17 2.23
168 169 6.491403 GGAAAATAGGATGACAATGTGCCTAT 59.509 38.462 11.14 11.14 42.21 2.57
169 170 5.827797 GGAAAATAGGATGACAATGTGCCTA 59.172 40.000 8.17 8.17 35.83 3.93
170 171 4.646492 GGAAAATAGGATGACAATGTGCCT 59.354 41.667 0.00 0.00 0.00 4.75
171 172 4.402155 TGGAAAATAGGATGACAATGTGCC 59.598 41.667 0.00 0.00 0.00 5.01
172 173 5.343249 GTGGAAAATAGGATGACAATGTGC 58.657 41.667 0.00 0.00 0.00 4.57
173 174 5.418524 TGGTGGAAAATAGGATGACAATGTG 59.581 40.000 0.00 0.00 0.00 3.21
174 175 5.579047 TGGTGGAAAATAGGATGACAATGT 58.421 37.500 0.00 0.00 0.00 2.71
175 176 6.509656 CATGGTGGAAAATAGGATGACAATG 58.490 40.000 0.00 0.00 0.00 2.82
176 177 5.069516 GCATGGTGGAAAATAGGATGACAAT 59.930 40.000 0.00 0.00 0.00 2.71
177 178 4.402155 GCATGGTGGAAAATAGGATGACAA 59.598 41.667 0.00 0.00 0.00 3.18
178 179 3.953612 GCATGGTGGAAAATAGGATGACA 59.046 43.478 0.00 0.00 0.00 3.58
179 180 3.953612 TGCATGGTGGAAAATAGGATGAC 59.046 43.478 0.00 0.00 0.00 3.06
180 181 3.953612 GTGCATGGTGGAAAATAGGATGA 59.046 43.478 0.00 0.00 0.00 2.92
181 182 3.700539 TGTGCATGGTGGAAAATAGGATG 59.299 43.478 0.00 0.00 0.00 3.51
182 183 3.979911 TGTGCATGGTGGAAAATAGGAT 58.020 40.909 0.00 0.00 0.00 3.24
183 184 3.448093 TGTGCATGGTGGAAAATAGGA 57.552 42.857 0.00 0.00 0.00 2.94
184 185 4.741321 ATTGTGCATGGTGGAAAATAGG 57.259 40.909 0.00 0.00 0.00 2.57
185 186 7.490840 TGATTATTGTGCATGGTGGAAAATAG 58.509 34.615 0.00 0.00 31.06 1.73
186 187 7.415592 TGATTATTGTGCATGGTGGAAAATA 57.584 32.000 0.00 0.00 28.33 1.40
187 188 6.297080 TGATTATTGTGCATGGTGGAAAAT 57.703 33.333 0.00 0.00 30.49 1.82
188 189 5.735285 TGATTATTGTGCATGGTGGAAAA 57.265 34.783 0.00 0.00 0.00 2.29
189 190 5.735285 TTGATTATTGTGCATGGTGGAAA 57.265 34.783 0.00 0.00 0.00 3.13
190 191 5.011431 TGTTTGATTATTGTGCATGGTGGAA 59.989 36.000 0.00 0.00 0.00 3.53
191 192 4.525874 TGTTTGATTATTGTGCATGGTGGA 59.474 37.500 0.00 0.00 0.00 4.02
192 193 4.818642 TGTTTGATTATTGTGCATGGTGG 58.181 39.130 0.00 0.00 0.00 4.61
193 194 6.971527 ATTGTTTGATTATTGTGCATGGTG 57.028 33.333 0.00 0.00 0.00 4.17
194 195 9.748708 GTATATTGTTTGATTATTGTGCATGGT 57.251 29.630 0.00 0.00 0.00 3.55
195 196 8.904712 CGTATATTGTTTGATTATTGTGCATGG 58.095 33.333 0.00 0.00 0.00 3.66
196 197 9.662545 TCGTATATTGTTTGATTATTGTGCATG 57.337 29.630 0.00 0.00 0.00 4.06
198 199 9.662545 CATCGTATATTGTTTGATTATTGTGCA 57.337 29.630 0.00 0.00 0.00 4.57
199 200 9.877137 TCATCGTATATTGTTTGATTATTGTGC 57.123 29.630 0.00 0.00 0.00 4.57
207 208 9.764363 AGTGTACATCATCGTATATTGTTTGAT 57.236 29.630 0.00 0.00 0.00 2.57
211 212 9.193133 GCTTAGTGTACATCATCGTATATTGTT 57.807 33.333 0.00 0.00 0.00 2.83
212 213 8.577296 AGCTTAGTGTACATCATCGTATATTGT 58.423 33.333 0.00 0.00 0.00 2.71
213 214 8.854312 CAGCTTAGTGTACATCATCGTATATTG 58.146 37.037 0.00 0.00 0.00 1.90
214 215 8.577296 ACAGCTTAGTGTACATCATCGTATATT 58.423 33.333 0.00 0.00 0.00 1.28
215 216 8.112016 ACAGCTTAGTGTACATCATCGTATAT 57.888 34.615 0.00 0.00 0.00 0.86
216 217 7.506328 ACAGCTTAGTGTACATCATCGTATA 57.494 36.000 0.00 0.00 0.00 1.47
217 218 6.392625 ACAGCTTAGTGTACATCATCGTAT 57.607 37.500 0.00 0.00 0.00 3.06
218 219 5.830000 ACAGCTTAGTGTACATCATCGTA 57.170 39.130 0.00 0.00 0.00 3.43
219 220 4.720649 ACAGCTTAGTGTACATCATCGT 57.279 40.909 0.00 0.00 0.00 3.73
220 221 5.102313 TCAACAGCTTAGTGTACATCATCG 58.898 41.667 0.00 0.00 0.00 3.84
221 222 6.510799 GCATCAACAGCTTAGTGTACATCATC 60.511 42.308 0.00 0.00 0.00 2.92
222 223 5.295292 GCATCAACAGCTTAGTGTACATCAT 59.705 40.000 0.00 0.00 0.00 2.45
223 224 4.631377 GCATCAACAGCTTAGTGTACATCA 59.369 41.667 0.00 0.00 0.00 3.07
224 225 4.259970 CGCATCAACAGCTTAGTGTACATC 60.260 45.833 0.00 0.00 0.00 3.06
225 226 3.618594 CGCATCAACAGCTTAGTGTACAT 59.381 43.478 0.00 0.00 0.00 2.29
226 227 2.993220 CGCATCAACAGCTTAGTGTACA 59.007 45.455 0.00 0.00 0.00 2.90
227 228 3.250744 TCGCATCAACAGCTTAGTGTAC 58.749 45.455 0.00 0.00 0.00 2.90
228 229 3.511699 CTCGCATCAACAGCTTAGTGTA 58.488 45.455 0.00 0.00 0.00 2.90
229 230 2.341257 CTCGCATCAACAGCTTAGTGT 58.659 47.619 0.00 0.00 0.00 3.55
230 231 1.061711 GCTCGCATCAACAGCTTAGTG 59.938 52.381 0.00 0.00 0.00 2.74
231 232 1.066573 AGCTCGCATCAACAGCTTAGT 60.067 47.619 0.00 0.00 40.77 2.24
232 233 1.649664 AGCTCGCATCAACAGCTTAG 58.350 50.000 0.00 0.00 40.77 2.18
233 234 3.840831 AGCTCGCATCAACAGCTTA 57.159 47.368 0.00 0.00 40.77 3.09
234 235 2.938354 AAGCTCGCATCAACAGCTT 58.062 47.368 0.00 0.00 46.46 3.74
235 236 2.099141 TAAAGCTCGCATCAACAGCT 57.901 45.000 0.00 0.00 45.69 4.24
236 237 2.096496 ACATAAAGCTCGCATCAACAGC 59.904 45.455 0.00 0.00 0.00 4.40
237 238 5.469373 TTACATAAAGCTCGCATCAACAG 57.531 39.130 0.00 0.00 0.00 3.16
238 239 5.180304 TGTTTACATAAAGCTCGCATCAACA 59.820 36.000 0.00 0.00 0.00 3.33
239 240 5.627172 TGTTTACATAAAGCTCGCATCAAC 58.373 37.500 0.00 0.00 0.00 3.18
240 241 5.871465 TGTTTACATAAAGCTCGCATCAA 57.129 34.783 0.00 0.00 0.00 2.57
241 242 5.411361 AGTTGTTTACATAAAGCTCGCATCA 59.589 36.000 0.00 0.00 0.00 3.07
242 243 5.869350 AGTTGTTTACATAAAGCTCGCATC 58.131 37.500 0.00 0.00 0.00 3.91
243 244 5.445939 CGAGTTGTTTACATAAAGCTCGCAT 60.446 40.000 14.38 0.00 36.89 4.73
244 245 4.143200 CGAGTTGTTTACATAAAGCTCGCA 60.143 41.667 14.38 0.00 36.89 5.10
245 246 4.323751 CGAGTTGTTTACATAAAGCTCGC 58.676 43.478 14.38 0.00 36.89 5.03
246 247 4.091509 AGCGAGTTGTTTACATAAAGCTCG 59.908 41.667 18.53 18.53 41.09 5.03
247 248 5.532025 AGCGAGTTGTTTACATAAAGCTC 57.468 39.130 0.00 0.00 0.00 4.09
248 249 5.941948 AAGCGAGTTGTTTACATAAAGCT 57.058 34.783 0.00 0.00 0.00 3.74
249 250 7.749126 ACATTAAGCGAGTTGTTTACATAAAGC 59.251 33.333 0.00 0.00 0.00 3.51
250 251 9.607285 AACATTAAGCGAGTTGTTTACATAAAG 57.393 29.630 0.00 0.00 0.00 1.85
251 252 9.388346 CAACATTAAGCGAGTTGTTTACATAAA 57.612 29.630 0.00 0.00 38.20 1.40
252 253 8.775527 TCAACATTAAGCGAGTTGTTTACATAA 58.224 29.630 0.00 0.00 42.33 1.90
253 254 8.312896 TCAACATTAAGCGAGTTGTTTACATA 57.687 30.769 0.00 0.00 42.33 2.29
254 255 7.197071 TCAACATTAAGCGAGTTGTTTACAT 57.803 32.000 0.00 0.00 42.33 2.29
255 256 6.606234 TCAACATTAAGCGAGTTGTTTACA 57.394 33.333 0.00 0.00 42.33 2.41
256 257 7.519002 AGATCAACATTAAGCGAGTTGTTTAC 58.481 34.615 0.00 0.00 42.33 2.01
257 258 7.411480 CGAGATCAACATTAAGCGAGTTGTTTA 60.411 37.037 0.00 0.00 42.33 2.01
258 259 6.560253 AGATCAACATTAAGCGAGTTGTTT 57.440 33.333 0.00 0.00 42.33 2.83
259 260 5.163953 CGAGATCAACATTAAGCGAGTTGTT 60.164 40.000 0.00 0.00 42.33 2.83
260 261 4.327357 CGAGATCAACATTAAGCGAGTTGT 59.673 41.667 0.00 0.00 42.33 3.32
261 262 4.562789 TCGAGATCAACATTAAGCGAGTTG 59.437 41.667 0.00 0.00 42.90 3.16
262 263 4.563184 GTCGAGATCAACATTAAGCGAGTT 59.437 41.667 0.00 0.00 0.00 3.01
263 264 4.106197 GTCGAGATCAACATTAAGCGAGT 58.894 43.478 0.00 0.00 0.00 4.18
264 265 4.105486 TGTCGAGATCAACATTAAGCGAG 58.895 43.478 0.00 0.00 0.00 5.03
265 266 4.104696 TGTCGAGATCAACATTAAGCGA 57.895 40.909 0.00 0.00 0.00 4.93
266 267 5.395325 AATGTCGAGATCAACATTAAGCG 57.605 39.130 15.43 0.00 42.67 4.68
288 289 8.688747 AATCTTTATGGGCACAATTTCAAAAA 57.311 26.923 0.00 0.00 0.00 1.94
289 290 8.688747 AAATCTTTATGGGCACAATTTCAAAA 57.311 26.923 0.00 0.00 0.00 2.44
290 291 8.688747 AAAATCTTTATGGGCACAATTTCAAA 57.311 26.923 0.00 0.00 0.00 2.69
291 292 8.566260 CAAAAATCTTTATGGGCACAATTTCAA 58.434 29.630 0.00 0.00 0.00 2.69
292 293 7.174599 CCAAAAATCTTTATGGGCACAATTTCA 59.825 33.333 0.00 0.00 0.00 2.69
293 294 7.390162 TCCAAAAATCTTTATGGGCACAATTTC 59.610 33.333 0.00 0.00 33.66 2.17
294 295 7.230027 TCCAAAAATCTTTATGGGCACAATTT 58.770 30.769 0.00 0.00 33.66 1.82
295 296 6.777782 TCCAAAAATCTTTATGGGCACAATT 58.222 32.000 0.00 0.00 33.66 2.32
296 297 6.371595 TCCAAAAATCTTTATGGGCACAAT 57.628 33.333 0.00 0.00 33.66 2.71
297 298 5.815233 TCCAAAAATCTTTATGGGCACAA 57.185 34.783 0.00 0.00 33.66 3.33
298 299 5.815233 TTCCAAAAATCTTTATGGGCACA 57.185 34.783 0.00 0.00 33.66 4.57
299 300 5.994668 TGTTTCCAAAAATCTTTATGGGCAC 59.005 36.000 0.00 0.00 33.66 5.01
300 301 5.994668 GTGTTTCCAAAAATCTTTATGGGCA 59.005 36.000 0.00 0.00 33.66 5.36
301 302 5.411361 GGTGTTTCCAAAAATCTTTATGGGC 59.589 40.000 0.00 0.00 35.97 5.36
302 303 6.768483 AGGTGTTTCCAAAAATCTTTATGGG 58.232 36.000 0.00 0.00 39.02 4.00
303 304 7.930865 TCAAGGTGTTTCCAAAAATCTTTATGG 59.069 33.333 0.00 0.00 39.02 2.74
304 305 8.885494 TCAAGGTGTTTCCAAAAATCTTTATG 57.115 30.769 0.00 0.00 39.02 1.90
305 306 8.704668 ACTCAAGGTGTTTCCAAAAATCTTTAT 58.295 29.630 0.00 0.00 39.02 1.40
306 307 8.073467 ACTCAAGGTGTTTCCAAAAATCTTTA 57.927 30.769 0.00 0.00 39.02 1.85
307 308 6.946340 ACTCAAGGTGTTTCCAAAAATCTTT 58.054 32.000 0.00 0.00 39.02 2.52
308 309 6.544928 ACTCAAGGTGTTTCCAAAAATCTT 57.455 33.333 0.00 0.00 39.02 2.40
309 310 6.605594 TGTACTCAAGGTGTTTCCAAAAATCT 59.394 34.615 0.00 0.00 39.02 2.40
310 311 6.695713 GTGTACTCAAGGTGTTTCCAAAAATC 59.304 38.462 0.00 0.00 39.02 2.17
311 312 6.379988 AGTGTACTCAAGGTGTTTCCAAAAAT 59.620 34.615 0.00 0.00 39.02 1.82
312 313 5.712917 AGTGTACTCAAGGTGTTTCCAAAAA 59.287 36.000 0.00 0.00 39.02 1.94
313 314 5.258051 AGTGTACTCAAGGTGTTTCCAAAA 58.742 37.500 0.00 0.00 39.02 2.44
314 315 4.850680 AGTGTACTCAAGGTGTTTCCAAA 58.149 39.130 0.00 0.00 39.02 3.28
315 316 4.497291 AGTGTACTCAAGGTGTTTCCAA 57.503 40.909 0.00 0.00 39.02 3.53
316 317 4.080807 TGAAGTGTACTCAAGGTGTTTCCA 60.081 41.667 0.00 0.00 39.02 3.53
317 318 4.448210 TGAAGTGTACTCAAGGTGTTTCC 58.552 43.478 0.00 0.00 0.00 3.13
318 319 6.431198 TTTGAAGTGTACTCAAGGTGTTTC 57.569 37.500 0.00 0.00 0.00 2.78
319 320 6.827586 TTTTGAAGTGTACTCAAGGTGTTT 57.172 33.333 0.00 0.00 0.00 2.83
320 321 6.827586 TTTTTGAAGTGTACTCAAGGTGTT 57.172 33.333 0.00 0.00 0.00 3.32
321 322 6.601613 TGATTTTTGAAGTGTACTCAAGGTGT 59.398 34.615 0.00 0.00 0.00 4.16
322 323 7.026631 TGATTTTTGAAGTGTACTCAAGGTG 57.973 36.000 0.00 0.00 0.00 4.00
323 324 7.823745 ATGATTTTTGAAGTGTACTCAAGGT 57.176 32.000 0.00 0.00 0.00 3.50
324 325 8.352201 TGAATGATTTTTGAAGTGTACTCAAGG 58.648 33.333 0.00 0.00 0.00 3.61
325 326 9.734620 TTGAATGATTTTTGAAGTGTACTCAAG 57.265 29.630 0.00 0.00 0.00 3.02
327 328 9.515020 GTTTGAATGATTTTTGAAGTGTACTCA 57.485 29.630 0.00 0.00 0.00 3.41
328 329 9.515020 TGTTTGAATGATTTTTGAAGTGTACTC 57.485 29.630 0.00 0.00 0.00 2.59
342 343 8.872845 GCGGAAAAAGATAATGTTTGAATGATT 58.127 29.630 0.00 0.00 0.00 2.57
343 344 8.034215 TGCGGAAAAAGATAATGTTTGAATGAT 58.966 29.630 0.00 0.00 0.00 2.45
344 345 7.374272 TGCGGAAAAAGATAATGTTTGAATGA 58.626 30.769 0.00 0.00 0.00 2.57
345 346 7.579589 TGCGGAAAAAGATAATGTTTGAATG 57.420 32.000 0.00 0.00 0.00 2.67
346 347 7.655328 TGTTGCGGAAAAAGATAATGTTTGAAT 59.345 29.630 0.00 0.00 0.00 2.57
347 348 6.980978 TGTTGCGGAAAAAGATAATGTTTGAA 59.019 30.769 0.00 0.00 0.00 2.69
348 349 6.507900 TGTTGCGGAAAAAGATAATGTTTGA 58.492 32.000 0.00 0.00 0.00 2.69
349 350 6.761731 TGTTGCGGAAAAAGATAATGTTTG 57.238 33.333 0.00 0.00 0.00 2.93
350 351 7.116233 GTGATGTTGCGGAAAAAGATAATGTTT 59.884 33.333 0.00 0.00 0.00 2.83
351 352 6.586082 GTGATGTTGCGGAAAAAGATAATGTT 59.414 34.615 0.00 0.00 0.00 2.71
352 353 6.071952 AGTGATGTTGCGGAAAAAGATAATGT 60.072 34.615 0.00 0.00 0.00 2.71
353 354 6.324819 AGTGATGTTGCGGAAAAAGATAATG 58.675 36.000 0.00 0.00 0.00 1.90
354 355 6.515272 AGTGATGTTGCGGAAAAAGATAAT 57.485 33.333 0.00 0.00 0.00 1.28
355 356 5.957842 AGTGATGTTGCGGAAAAAGATAA 57.042 34.783 0.00 0.00 0.00 1.75
356 357 5.957842 AAGTGATGTTGCGGAAAAAGATA 57.042 34.783 0.00 0.00 0.00 1.98
357 358 4.853924 AAGTGATGTTGCGGAAAAAGAT 57.146 36.364 0.00 0.00 0.00 2.40
358 359 5.471797 TGATAAGTGATGTTGCGGAAAAAGA 59.528 36.000 0.00 0.00 0.00 2.52
359 360 5.698832 TGATAAGTGATGTTGCGGAAAAAG 58.301 37.500 0.00 0.00 0.00 2.27
360 361 5.697473 TGATAAGTGATGTTGCGGAAAAA 57.303 34.783 0.00 0.00 0.00 1.94
361 362 5.182950 ACATGATAAGTGATGTTGCGGAAAA 59.817 36.000 0.00 0.00 26.81 2.29
362 363 4.699735 ACATGATAAGTGATGTTGCGGAAA 59.300 37.500 0.00 0.00 26.81 3.13
363 364 4.260985 ACATGATAAGTGATGTTGCGGAA 58.739 39.130 0.00 0.00 26.81 4.30
364 365 3.872696 ACATGATAAGTGATGTTGCGGA 58.127 40.909 0.00 0.00 26.81 5.54
365 366 4.621068 AACATGATAAGTGATGTTGCGG 57.379 40.909 0.00 0.00 40.07 5.69
366 367 7.697710 ACAAATAACATGATAAGTGATGTTGCG 59.302 33.333 0.00 0.00 41.35 4.85
367 368 8.915871 ACAAATAACATGATAAGTGATGTTGC 57.084 30.769 0.00 0.00 41.35 4.17
370 371 9.844790 CACAACAAATAACATGATAAGTGATGT 57.155 29.630 0.00 3.33 33.35 3.06
371 372 9.844790 ACACAACAAATAACATGATAAGTGATG 57.155 29.630 0.00 2.72 0.00 3.07
372 373 9.844790 CACACAACAAATAACATGATAAGTGAT 57.155 29.630 0.00 0.00 0.00 3.06
373 374 9.061435 TCACACAACAAATAACATGATAAGTGA 57.939 29.630 0.00 0.00 0.00 3.41
374 375 9.676195 TTCACACAACAAATAACATGATAAGTG 57.324 29.630 0.00 0.00 0.00 3.16
375 376 9.897744 CTTCACACAACAAATAACATGATAAGT 57.102 29.630 0.00 0.00 0.00 2.24
379 380 9.985730 AAATCTTCACACAACAAATAACATGAT 57.014 25.926 0.00 0.00 0.00 2.45
380 381 9.462174 GAAATCTTCACACAACAAATAACATGA 57.538 29.630 0.00 0.00 0.00 3.07
381 382 9.247126 TGAAATCTTCACACAACAAATAACATG 57.753 29.630 0.00 0.00 34.08 3.21
382 383 9.814899 TTGAAATCTTCACACAACAAATAACAT 57.185 25.926 0.00 0.00 39.87 2.71
383 384 9.299963 CTTGAAATCTTCACACAACAAATAACA 57.700 29.630 0.00 0.00 39.87 2.41
384 385 8.755018 CCTTGAAATCTTCACACAACAAATAAC 58.245 33.333 0.00 0.00 39.87 1.89
385 386 7.925483 CCCTTGAAATCTTCACACAACAAATAA 59.075 33.333 0.00 0.00 39.87 1.40
386 387 7.286546 TCCCTTGAAATCTTCACACAACAAATA 59.713 33.333 0.00 0.00 39.87 1.40
387 388 6.098124 TCCCTTGAAATCTTCACACAACAAAT 59.902 34.615 0.00 0.00 39.87 2.32
388 389 5.420421 TCCCTTGAAATCTTCACACAACAAA 59.580 36.000 0.00 0.00 39.87 2.83
389 390 4.952957 TCCCTTGAAATCTTCACACAACAA 59.047 37.500 0.00 0.00 39.87 2.83
390 391 4.531854 TCCCTTGAAATCTTCACACAACA 58.468 39.130 0.00 0.00 39.87 3.33
391 392 5.712152 ATCCCTTGAAATCTTCACACAAC 57.288 39.130 0.00 0.00 39.87 3.32
392 393 6.098124 ACAAATCCCTTGAAATCTTCACACAA 59.902 34.615 0.00 0.00 39.87 3.33
393 394 5.598005 ACAAATCCCTTGAAATCTTCACACA 59.402 36.000 0.00 0.00 39.87 3.72
394 395 6.089249 ACAAATCCCTTGAAATCTTCACAC 57.911 37.500 0.00 0.00 39.87 3.82
395 396 6.323482 TCAACAAATCCCTTGAAATCTTCACA 59.677 34.615 0.00 0.00 39.87 3.58
396 397 6.748132 TCAACAAATCCCTTGAAATCTTCAC 58.252 36.000 0.00 0.00 39.87 3.18
397 398 6.975196 TCAACAAATCCCTTGAAATCTTCA 57.025 33.333 0.00 0.00 38.50 3.02
398 399 7.381323 ACATCAACAAATCCCTTGAAATCTTC 58.619 34.615 0.00 0.00 38.50 2.87
399 400 7.307131 ACATCAACAAATCCCTTGAAATCTT 57.693 32.000 0.00 0.00 38.50 2.40
400 401 6.349611 CGACATCAACAAATCCCTTGAAATCT 60.350 38.462 0.00 0.00 38.50 2.40
401 402 5.801947 CGACATCAACAAATCCCTTGAAATC 59.198 40.000 0.00 0.00 38.50 2.17
402 403 5.476599 TCGACATCAACAAATCCCTTGAAAT 59.523 36.000 0.00 0.00 38.50 2.17
403 404 4.824537 TCGACATCAACAAATCCCTTGAAA 59.175 37.500 0.00 0.00 38.50 2.69
404 405 4.215399 GTCGACATCAACAAATCCCTTGAA 59.785 41.667 11.55 0.00 38.50 2.69
405 406 3.751175 GTCGACATCAACAAATCCCTTGA 59.249 43.478 11.55 0.00 38.50 3.02
406 407 3.424829 CGTCGACATCAACAAATCCCTTG 60.425 47.826 17.16 0.00 41.19 3.61
407 408 2.742053 CGTCGACATCAACAAATCCCTT 59.258 45.455 17.16 0.00 0.00 3.95
408 409 2.028476 TCGTCGACATCAACAAATCCCT 60.028 45.455 17.16 0.00 0.00 4.20
409 410 2.343101 TCGTCGACATCAACAAATCCC 58.657 47.619 17.16 0.00 0.00 3.85
410 411 2.993899 ACTCGTCGACATCAACAAATCC 59.006 45.455 17.16 0.00 0.00 3.01
411 412 3.181530 CCACTCGTCGACATCAACAAATC 60.182 47.826 17.16 0.00 0.00 2.17
412 413 2.736721 CCACTCGTCGACATCAACAAAT 59.263 45.455 17.16 0.00 0.00 2.32
413 414 2.131972 CCACTCGTCGACATCAACAAA 58.868 47.619 17.16 0.00 0.00 2.83
414 415 1.604438 CCCACTCGTCGACATCAACAA 60.604 52.381 17.16 0.00 0.00 2.83
415 416 0.038618 CCCACTCGTCGACATCAACA 60.039 55.000 17.16 0.00 0.00 3.33
416 417 0.038526 ACCCACTCGTCGACATCAAC 60.039 55.000 17.16 0.00 0.00 3.18
417 418 0.038618 CACCCACTCGTCGACATCAA 60.039 55.000 17.16 0.00 0.00 2.57
418 419 1.176619 ACACCCACTCGTCGACATCA 61.177 55.000 17.16 0.00 0.00 3.07
419 420 0.806868 TACACCCACTCGTCGACATC 59.193 55.000 17.16 0.00 0.00 3.06
420 421 1.134367 CATACACCCACTCGTCGACAT 59.866 52.381 17.16 0.00 0.00 3.06
421 422 0.524414 CATACACCCACTCGTCGACA 59.476 55.000 17.16 1.87 0.00 4.35
422 423 0.806868 TCATACACCCACTCGTCGAC 59.193 55.000 5.18 5.18 0.00 4.20
423 424 1.092348 CTCATACACCCACTCGTCGA 58.908 55.000 0.00 0.00 0.00 4.20
424 425 1.064208 CTCTCATACACCCACTCGTCG 59.936 57.143 0.00 0.00 0.00 5.12
425 426 1.405821 CCTCTCATACACCCACTCGTC 59.594 57.143 0.00 0.00 0.00 4.20
426 427 1.272536 ACCTCTCATACACCCACTCGT 60.273 52.381 0.00 0.00 0.00 4.18
427 428 1.135139 CACCTCTCATACACCCACTCG 59.865 57.143 0.00 0.00 0.00 4.18
428 429 2.457598 TCACCTCTCATACACCCACTC 58.542 52.381 0.00 0.00 0.00 3.51
429 430 2.623418 TCACCTCTCATACACCCACT 57.377 50.000 0.00 0.00 0.00 4.00
430 431 3.914426 AATCACCTCTCATACACCCAC 57.086 47.619 0.00 0.00 0.00 4.61
431 432 4.927267 AAAATCACCTCTCATACACCCA 57.073 40.909 0.00 0.00 0.00 4.51
450 451 3.776340 GTTGCAACGGGAGAAAGAAAAA 58.224 40.909 14.90 0.00 0.00 1.94
451 452 3.430333 GTTGCAACGGGAGAAAGAAAA 57.570 42.857 14.90 0.00 0.00 2.29
464 465 2.095847 CATGCCCATGCGTTGCAAC 61.096 57.895 19.89 19.89 43.62 4.17
465 466 2.097201 AACATGCCCATGCGTTGCAA 62.097 50.000 8.11 0.00 43.62 4.08
466 467 2.097201 AAACATGCCCATGCGTTGCA 62.097 50.000 8.11 2.57 44.86 4.08
467 468 1.374505 AAACATGCCCATGCGTTGC 60.375 52.632 8.11 0.00 42.39 4.17
468 469 1.628447 GCAAACATGCCCATGCGTTG 61.628 55.000 15.53 15.53 42.39 4.10
469 470 1.374505 GCAAACATGCCCATGCGTT 60.375 52.632 8.11 0.84 42.39 4.84
470 471 0.964860 TAGCAAACATGCCCATGCGT 60.965 50.000 8.11 0.00 43.39 5.24
471 472 0.248743 CTAGCAAACATGCCCATGCG 60.249 55.000 8.11 0.00 43.39 4.73
472 473 0.819582 ACTAGCAAACATGCCCATGC 59.180 50.000 8.11 0.00 42.39 4.06
473 474 4.158394 AGTTAACTAGCAAACATGCCCATG 59.842 41.667 6.26 6.71 44.15 3.66
474 475 4.344104 AGTTAACTAGCAAACATGCCCAT 58.656 39.130 6.26 0.00 34.90 4.00
475 476 3.761897 AGTTAACTAGCAAACATGCCCA 58.238 40.909 6.26 0.00 34.90 5.36
476 477 6.451064 AATAGTTAACTAGCAAACATGCCC 57.549 37.500 19.58 0.00 34.90 5.36
477 478 8.129211 CCTTAATAGTTAACTAGCAAACATGCC 58.871 37.037 19.58 0.00 34.90 4.40
478 479 8.889717 TCCTTAATAGTTAACTAGCAAACATGC 58.110 33.333 19.58 0.00 0.00 4.06
539 540 8.719648 TGCTGATTTTGCACTATTTTAAAATGG 58.280 29.630 21.19 20.25 34.07 3.16
618 620 4.712122 TGACACCTCCACAAAAAGTTTC 57.288 40.909 0.00 0.00 0.00 2.78
632 634 8.065473 TGAATGCATTACAATAATTGACACCT 57.935 30.769 12.97 0.00 0.00 4.00
633 635 8.757789 CATGAATGCATTACAATAATTGACACC 58.242 33.333 12.97 0.00 30.68 4.16
666 668 5.705609 TGCTCTTTTTAGAATGTGGAACC 57.294 39.130 0.00 0.00 34.36 3.62
694 696 8.092687 AGAATCTGTTTGCAATATTTTGAGCTT 58.907 29.630 0.00 0.00 34.60 3.74
793 798 3.077088 GGGGATGACCTGGTAGTAGGATA 59.923 52.174 0.00 0.00 40.42 2.59
795 800 1.219724 GGGGATGACCTGGTAGTAGGA 59.780 57.143 0.00 0.00 40.42 2.94
798 803 2.359994 GGAAGGGGATGACCTGGTAGTA 60.360 54.545 0.00 0.00 40.87 1.82
801 806 0.722676 AGGAAGGGGATGACCTGGTA 59.277 55.000 0.00 0.00 40.87 3.25
802 807 0.621862 GAGGAAGGGGATGACCTGGT 60.622 60.000 0.00 0.00 40.87 4.00
810 815 1.765314 CGATGAACAGAGGAAGGGGAT 59.235 52.381 0.00 0.00 0.00 3.85
862 867 4.175337 CCCCGTGGCCATCGACAT 62.175 66.667 23.58 0.00 0.00 3.06
966 971 1.072505 GCAAGGGGAGGACGAAACA 59.927 57.895 0.00 0.00 0.00 2.83
1042 1047 4.373116 GAAGACGGTGGAGCGGCA 62.373 66.667 6.88 0.00 0.00 5.69
1071 1076 1.022982 AGTCGACGTAGACGGATGCA 61.023 55.000 20.83 0.00 46.86 3.96
1229 1234 1.836802 GGGAGTCAAAGGAGAGCTCAT 59.163 52.381 17.77 0.29 0.00 2.90
1242 1247 1.083912 AGGGGGAAAATAGGGGAGTCA 59.916 52.381 0.00 0.00 0.00 3.41
1268 1274 0.659427 TACGATGACTTAGGCGACGG 59.341 55.000 8.31 0.00 0.00 4.79
1397 1403 0.913451 AAGCATCAGAGCAGGGGAGT 60.913 55.000 0.00 0.00 36.85 3.85
1411 1417 4.394300 GTGTATCAGCAACAAGAGAAGCAT 59.606 41.667 0.00 0.00 0.00 3.79
1423 1429 2.817834 GCGGCGGTGTATCAGCAA 60.818 61.111 9.78 0.00 38.93 3.91
1442 1448 0.886490 GTAGCAGCGGCAAGGCATAT 60.886 55.000 12.44 0.00 44.61 1.78
1457 1463 0.526524 CACAGCTCGTAGCAGGTAGC 60.527 60.000 9.09 0.00 45.56 3.58
1458 1464 0.526524 GCACAGCTCGTAGCAGGTAG 60.527 60.000 9.09 4.41 45.56 3.18
1459 1465 0.965866 AGCACAGCTCGTAGCAGGTA 60.966 55.000 9.09 0.00 45.56 3.08
1460 1466 2.262915 GCACAGCTCGTAGCAGGT 59.737 61.111 9.09 4.62 45.56 4.00
1461 1467 1.808799 CAGCACAGCTCGTAGCAGG 60.809 63.158 9.09 4.10 45.56 4.85
1571 1577 2.664851 CGAGCGAGGTTGTTGGCA 60.665 61.111 0.00 0.00 0.00 4.92
1601 1607 1.430479 GATGAGCTGCATCGGAGATG 58.570 55.000 1.02 5.71 43.57 2.90
1602 1608 3.910817 GATGAGCTGCATCGGAGAT 57.089 52.632 1.02 0.00 43.57 2.75
1639 1645 1.297689 CAGAGCAGCAAGGGTAGCA 59.702 57.895 0.00 0.00 0.00 3.49
1643 1649 3.255397 AGGCAGAGCAGCAAGGGT 61.255 61.111 0.00 0.00 35.83 4.34
1707 1713 4.812476 CGTCAGCGGGCGATGGAA 62.812 66.667 4.36 0.00 31.68 3.53
1739 1745 3.190849 CAGTGCGCGGAGGTGATG 61.191 66.667 8.83 0.00 0.00 3.07
1751 1757 4.828925 GGCGAGGAGAGGCAGTGC 62.829 72.222 6.55 6.55 0.00 4.40
1754 1760 3.222855 ATCGGCGAGGAGAGGCAG 61.223 66.667 17.22 0.00 0.00 4.85
1755 1761 3.531207 CATCGGCGAGGAGAGGCA 61.531 66.667 17.69 0.00 0.00 4.75
1823 1830 2.607025 GGGAAATAGGGGTGGGGC 59.393 66.667 0.00 0.00 0.00 5.80
1849 1856 2.042843 CGGTAGGCCAGGAGGAGT 60.043 66.667 5.01 0.00 36.89 3.85
1854 1861 4.075793 AGGAGCGGTAGGCCAGGA 62.076 66.667 5.01 0.00 45.17 3.86
1857 1864 2.038975 AAGAGGAGCGGTAGGCCA 59.961 61.111 5.01 0.00 45.17 5.36
2141 2162 4.404098 CGGGCTAACAAGGCGGGT 62.404 66.667 0.00 0.00 34.95 5.28
2148 2169 2.671619 GGTGCAGCGGGCTAACAA 60.672 61.111 0.00 0.00 45.15 2.83
2149 2170 4.715523 GGGTGCAGCGGGCTAACA 62.716 66.667 10.24 0.00 45.15 2.41
2172 2193 4.947147 GGCAACCAGGTGTGCGGA 62.947 66.667 16.11 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.