Multiple sequence alignment - TraesCS6A01G140400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G140400 chr6A 100.000 3251 0 0 1 3251 115282311 115279061 0.000000e+00 6004.0
1 TraesCS6A01G140400 chr6A 85.683 1355 175 11 981 2330 106986277 106984937 0.000000e+00 1410.0
2 TraesCS6A01G140400 chr6A 78.769 1267 228 28 1062 2308 106895372 106894127 0.000000e+00 811.0
3 TraesCS6A01G140400 chr6A 94.857 350 17 1 126 474 465104509 465104858 2.210000e-151 545.0
4 TraesCS6A01G140400 chr6A 76.458 480 89 20 1033 1506 31745474 31745013 4.190000e-59 239.0
5 TraesCS6A01G140400 chr6A 98.413 126 0 2 1 125 595042206 595042330 1.520000e-53 220.0
6 TraesCS6A01G140400 chr6A 93.878 49 2 1 2972 3019 496841965 496842013 4.500000e-09 73.1
7 TraesCS6A01G140400 chr6D 95.994 1373 48 4 961 2330 93524702 93526070 0.000000e+00 2224.0
8 TraesCS6A01G140400 chr6D 85.735 1360 175 11 965 2319 88892092 88890747 0.000000e+00 1419.0
9 TraesCS6A01G140400 chr6D 94.196 603 31 2 2347 2949 93526258 93526856 0.000000e+00 917.0
10 TraesCS6A01G140400 chr6D 78.692 1300 223 38 1049 2319 88837039 88835765 0.000000e+00 817.0
11 TraesCS6A01G140400 chr6D 79.751 563 83 20 2399 2943 88890651 88890102 2.370000e-101 379.0
12 TraesCS6A01G140400 chr6D 89.641 251 20 5 3001 3248 93526932 93527179 6.770000e-82 315.0
13 TraesCS6A01G140400 chr6D 81.126 302 53 4 1062 1361 31479755 31480054 4.190000e-59 239.0
14 TraesCS6A01G140400 chr6D 84.817 191 25 2 3061 3251 88890040 88889854 4.280000e-44 189.0
15 TraesCS6A01G140400 chr6D 97.561 41 1 0 2972 3012 458858271 458858311 1.620000e-08 71.3
16 TraesCS6A01G140400 chr6D 93.023 43 3 0 2972 3014 20553713 20553755 2.710000e-06 63.9
17 TraesCS6A01G140400 chr6B 91.068 1489 111 14 850 2330 179470141 179468667 0.000000e+00 1993.0
18 TraesCS6A01G140400 chr6B 84.492 1367 191 13 965 2325 169236585 169235234 0.000000e+00 1330.0
19 TraesCS6A01G140400 chr6B 78.180 1297 229 40 1062 2330 169176986 169175716 0.000000e+00 778.0
20 TraesCS6A01G140400 chr6B 88.834 609 49 11 2347 2952 179468463 179467871 0.000000e+00 730.0
21 TraesCS6A01G140400 chr6B 86.721 369 43 5 474 839 179470843 179470478 3.910000e-109 405.0
22 TraesCS6A01G140400 chr6B 86.056 251 22 3 3001 3251 179467800 179467563 1.160000e-64 257.0
23 TraesCS6A01G140400 chr6B 90.541 74 6 1 2946 3018 668427421 668427348 2.670000e-16 97.1
24 TraesCS6A01G140400 chr6B 93.878 49 3 0 2971 3019 616933609 616933657 1.250000e-09 75.0
25 TraesCS6A01G140400 chr2A 94.398 357 18 2 126 481 653240240 653239885 6.130000e-152 547.0
26 TraesCS6A01G140400 chr2A 94.571 350 18 1 126 474 158718678 158718329 1.030000e-149 540.0
27 TraesCS6A01G140400 chr2A 93.539 356 22 1 126 480 59901242 59900887 2.220000e-146 529.0
28 TraesCS6A01G140400 chr2A 98.413 126 0 2 1 125 778435434 778435558 1.520000e-53 220.0
29 TraesCS6A01G140400 chr2A 96.269 134 3 2 1 133 573760166 573760298 5.460000e-53 219.0
30 TraesCS6A01G140400 chr2A 96.269 134 1 3 1 133 486242461 486242591 1.960000e-52 217.0
31 TraesCS6A01G140400 chr2A 96.875 128 2 2 1 127 731330138 731330264 2.540000e-51 213.0
32 TraesCS6A01G140400 chr2A 93.878 49 3 0 2971 3019 285622346 285622298 1.250000e-09 75.0
33 TraesCS6A01G140400 chr7A 94.587 351 17 2 126 474 384263893 384263543 2.850000e-150 542.0
34 TraesCS6A01G140400 chr4A 94.571 350 18 1 126 474 320182754 320183103 1.030000e-149 540.0
35 TraesCS6A01G140400 chr4A 97.015 134 2 2 1 133 630882734 630882602 1.170000e-54 224.0
36 TraesCS6A01G140400 chr5A 94.556 349 17 2 126 473 111692504 111692851 3.690000e-149 538.0
37 TraesCS6A01G140400 chr5A 97.826 46 0 1 2972 3017 355184475 355184431 9.670000e-11 78.7
38 TraesCS6A01G140400 chr5A 90.741 54 5 0 2181 2234 547404636 547404583 4.500000e-09 73.1
39 TraesCS6A01G140400 chr5A 85.915 71 6 3 2181 2248 547552296 547552365 4.500000e-09 73.1
40 TraesCS6A01G140400 chr5A 87.931 58 5 2 2969 3025 659339997 659340053 2.090000e-07 67.6
41 TraesCS6A01G140400 chr5A 87.931 58 5 2 2972 3028 709195695 709195639 2.090000e-07 67.6
42 TraesCS6A01G140400 chr3A 94.302 351 18 2 126 474 558825730 558826080 1.330000e-148 536.0
43 TraesCS6A01G140400 chr3A 97.638 127 3 0 1 127 581668346 581668220 5.460000e-53 219.0
44 TraesCS6A01G140400 chr3A 82.857 70 9 3 2946 3014 740351762 740351829 3.500000e-05 60.2
45 TraesCS6A01G140400 chr1A 94.302 351 18 2 126 474 312254916 312254566 1.330000e-148 536.0
46 TraesCS6A01G140400 chr1A 98.400 125 2 0 1 125 586309101 586309225 1.520000e-53 220.0
47 TraesCS6A01G140400 chr1A 96.947 131 2 2 6 135 542294663 542294792 5.460000e-53 219.0
48 TraesCS6A01G140400 chr1A 77.209 215 46 1 1041 1255 569949659 569949448 4.400000e-24 122.0
49 TraesCS6A01G140400 chr1A 100.000 41 0 0 2972 3012 487730657 487730697 3.480000e-10 76.8
50 TraesCS6A01G140400 chr1A 95.556 45 2 0 2971 3015 376754439 376754395 4.500000e-09 73.1
51 TraesCS6A01G140400 chr1A 91.667 48 3 1 2973 3019 568782075 568782122 7.530000e-07 65.8
52 TraesCS6A01G140400 chr7B 77.698 278 60 2 1093 1369 594763657 594763933 5.580000e-38 169.0
53 TraesCS6A01G140400 chr3D 95.918 49 2 0 2971 3019 441183386 441183338 2.690000e-11 80.5
54 TraesCS6A01G140400 chr3D 84.286 70 9 2 2946 3014 608067643 608067711 2.090000e-07 67.6
55 TraesCS6A01G140400 chr5D 95.833 48 2 0 2181 2228 432805601 432805554 9.670000e-11 78.7
56 TraesCS6A01G140400 chr5D 84.722 72 11 0 2162 2233 432984363 432984434 4.500000e-09 73.1
57 TraesCS6A01G140400 chr5D 84.507 71 7 3 2183 2250 432996470 432996539 2.090000e-07 67.6
58 TraesCS6A01G140400 chr2B 95.918 49 1 1 2971 3018 210843303 210843255 9.670000e-11 78.7
59 TraesCS6A01G140400 chr2B 93.878 49 3 0 2971 3019 323085418 323085370 1.250000e-09 75.0
60 TraesCS6A01G140400 chr3B 97.727 44 1 0 2971 3014 671004648 671004605 3.480000e-10 76.8
61 TraesCS6A01G140400 chr1D 100.000 41 0 0 2972 3012 388640449 388640489 3.480000e-10 76.8
62 TraesCS6A01G140400 chr1B 100.000 41 0 0 2972 3012 522012294 522012334 3.480000e-10 76.8
63 TraesCS6A01G140400 chr4B 97.674 43 1 0 2972 3014 664760969 664761011 1.250000e-09 75.0
64 TraesCS6A01G140400 chr4B 95.238 42 2 0 2972 3013 650697335 650697294 2.090000e-07 67.6
65 TraesCS6A01G140400 chr4B 87.931 58 4 3 2972 3028 671697123 671697068 7.530000e-07 65.8
66 TraesCS6A01G140400 chr5B 84.722 72 11 0 2162 2233 526270753 526270824 4.500000e-09 73.1
67 TraesCS6A01G140400 chr5B 83.099 71 8 3 2183 2250 526519031 526519100 9.740000e-06 62.1
68 TraesCS6A01G140400 chr4D 100.000 38 0 0 2975 3012 463725161 463725198 1.620000e-08 71.3
69 TraesCS6A01G140400 chr4D 97.561 41 1 0 2972 3012 497197947 497197987 1.620000e-08 71.3
70 TraesCS6A01G140400 chr4D 95.238 42 2 0 2971 3012 334628241 334628200 2.090000e-07 67.6
71 TraesCS6A01G140400 chr4D 95.122 41 2 0 2972 3012 499225909 499225949 7.530000e-07 65.8
72 TraesCS6A01G140400 chr4D 91.304 46 3 1 2972 3017 323574876 323574832 9.740000e-06 62.1
73 TraesCS6A01G140400 chrUn 93.333 45 3 0 2971 3015 154694916 154694872 2.090000e-07 67.6
74 TraesCS6A01G140400 chrUn 91.111 45 4 0 2972 3016 247967980 247967936 9.740000e-06 62.1
75 TraesCS6A01G140400 chrUn 92.683 41 3 0 2972 3012 28955480 28955520 3.500000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G140400 chr6A 115279061 115282311 3250 True 6004.000000 6004 100.000000 1 3251 1 chr6A.!!$R4 3250
1 TraesCS6A01G140400 chr6A 106984937 106986277 1340 True 1410.000000 1410 85.683000 981 2330 1 chr6A.!!$R3 1349
2 TraesCS6A01G140400 chr6A 106894127 106895372 1245 True 811.000000 811 78.769000 1062 2308 1 chr6A.!!$R2 1246
3 TraesCS6A01G140400 chr6D 93524702 93527179 2477 False 1152.000000 2224 93.277000 961 3248 3 chr6D.!!$F4 2287
4 TraesCS6A01G140400 chr6D 88835765 88837039 1274 True 817.000000 817 78.692000 1049 2319 1 chr6D.!!$R1 1270
5 TraesCS6A01G140400 chr6D 88889854 88892092 2238 True 662.333333 1419 83.434333 965 3251 3 chr6D.!!$R2 2286
6 TraesCS6A01G140400 chr6B 169235234 169236585 1351 True 1330.000000 1330 84.492000 965 2325 1 chr6B.!!$R2 1360
7 TraesCS6A01G140400 chr6B 179467563 179470843 3280 True 846.250000 1993 88.169750 474 3251 4 chr6B.!!$R4 2777
8 TraesCS6A01G140400 chr6B 169175716 169176986 1270 True 778.000000 778 78.180000 1062 2330 1 chr6B.!!$R1 1268

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
236 237 0.031314 CCTGGTCTCGATCGTCATGG 59.969 60.0 15.94 7.51 0.00 3.66 F
239 240 0.103208 GGTCTCGATCGTCATGGCTT 59.897 55.0 15.94 0.00 0.00 4.35 F
288 289 0.106521 GCCTTGATCTCTCTGCCTCC 59.893 60.0 0.00 0.00 0.00 4.30 F
347 348 0.174389 CCTGTCATCTGTCCCACGAG 59.826 60.0 0.00 0.00 0.00 4.18 F
707 708 0.250081 TGTGTTGTGCGCATGGTCTA 60.250 50.0 15.91 0.00 31.84 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1056 1391 1.078918 GGTTACGGTAGTGGTGGGC 60.079 63.158 0.0 0.0 0.00 5.36 R
1058 1393 1.446618 GCGGTTACGGTAGTGGTGG 60.447 63.158 0.0 0.0 41.36 4.61 R
1975 2318 1.472878 CTCGACAATCGTCTCCAAGGA 59.527 52.381 0.0 0.0 41.35 3.36 R
2236 2585 2.031258 TGTTGTCAAGCACCTTCGAA 57.969 45.000 0.0 0.0 0.00 3.71 R
2363 2909 0.250467 AGACTTGTGCTGAATGGCGT 60.250 50.000 0.0 0.0 34.52 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.117589 CGTTGTCGGTCTACAAGGG 57.882 57.895 0.00 0.00 39.92 3.95
32 33 0.316204 CGTTGTCGGTCTACAAGGGT 59.684 55.000 0.00 0.00 39.92 4.34
33 34 1.541147 CGTTGTCGGTCTACAAGGGTA 59.459 52.381 0.00 0.00 39.92 3.69
34 35 2.669391 CGTTGTCGGTCTACAAGGGTAC 60.669 54.545 0.00 0.00 39.92 3.34
35 36 1.167851 TGTCGGTCTACAAGGGTACG 58.832 55.000 0.00 0.00 0.00 3.67
36 37 1.168714 GTCGGTCTACAAGGGTACGT 58.831 55.000 0.00 0.00 0.00 3.57
37 38 2.290008 TGTCGGTCTACAAGGGTACGTA 60.290 50.000 0.00 0.00 0.00 3.57
38 39 2.352960 GTCGGTCTACAAGGGTACGTAG 59.647 54.545 0.00 0.00 37.12 3.51
39 40 2.236146 TCGGTCTACAAGGGTACGTAGA 59.764 50.000 0.00 4.74 41.32 2.59
40 41 3.118261 TCGGTCTACAAGGGTACGTAGAT 60.118 47.826 10.36 0.00 44.32 1.98
41 42 3.249559 CGGTCTACAAGGGTACGTAGATC 59.750 52.174 10.36 9.26 44.32 2.75
42 43 4.202441 GGTCTACAAGGGTACGTAGATCA 58.798 47.826 11.75 0.00 44.32 2.92
43 44 4.036144 GGTCTACAAGGGTACGTAGATCAC 59.964 50.000 11.75 0.00 44.32 3.06
44 45 4.637534 GTCTACAAGGGTACGTAGATCACA 59.362 45.833 10.36 0.00 44.32 3.58
45 46 3.863142 ACAAGGGTACGTAGATCACAC 57.137 47.619 0.00 0.00 0.00 3.82
46 47 3.428532 ACAAGGGTACGTAGATCACACT 58.571 45.455 0.00 0.00 0.00 3.55
47 48 3.442977 ACAAGGGTACGTAGATCACACTC 59.557 47.826 0.00 0.00 0.00 3.51
48 49 3.648507 AGGGTACGTAGATCACACTCT 57.351 47.619 0.00 0.00 0.00 3.24
49 50 3.543665 AGGGTACGTAGATCACACTCTC 58.456 50.000 0.00 0.00 0.00 3.20
50 51 2.617774 GGGTACGTAGATCACACTCTCC 59.382 54.545 0.00 0.00 0.00 3.71
51 52 2.617774 GGTACGTAGATCACACTCTCCC 59.382 54.545 0.00 0.00 0.00 4.30
52 53 1.765230 ACGTAGATCACACTCTCCCC 58.235 55.000 0.00 0.00 0.00 4.81
53 54 1.285373 ACGTAGATCACACTCTCCCCT 59.715 52.381 0.00 0.00 0.00 4.79
54 55 1.950909 CGTAGATCACACTCTCCCCTC 59.049 57.143 0.00 0.00 0.00 4.30
55 56 2.422235 CGTAGATCACACTCTCCCCTCT 60.422 54.545 0.00 0.00 0.00 3.69
56 57 2.452600 AGATCACACTCTCCCCTCTC 57.547 55.000 0.00 0.00 0.00 3.20
57 58 1.028905 GATCACACTCTCCCCTCTCG 58.971 60.000 0.00 0.00 0.00 4.04
58 59 0.333312 ATCACACTCTCCCCTCTCGT 59.667 55.000 0.00 0.00 0.00 4.18
59 60 0.112606 TCACACTCTCCCCTCTCGTT 59.887 55.000 0.00 0.00 0.00 3.85
60 61 0.244994 CACACTCTCCCCTCTCGTTG 59.755 60.000 0.00 0.00 0.00 4.10
61 62 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
62 63 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
63 64 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
64 65 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
65 66 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
66 67 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
67 68 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
68 69 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
69 70 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
70 71 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
71 72 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
72 73 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
73 74 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
74 75 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
75 76 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
76 77 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
77 78 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
78 79 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
79 80 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
80 81 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
81 82 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
82 83 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
83 84 1.018910 TGCATCACCATGATCTTGCG 58.981 50.000 3.07 0.30 34.28 4.85
84 85 1.019673 GCATCACCATGATCTTGCGT 58.980 50.000 3.07 0.87 34.28 5.24
85 86 1.268386 GCATCACCATGATCTTGCGTG 60.268 52.381 17.02 17.02 34.28 5.34
86 87 2.011947 CATCACCATGATCTTGCGTGT 58.988 47.619 19.89 6.63 34.28 4.49
87 88 1.441738 TCACCATGATCTTGCGTGTG 58.558 50.000 19.89 14.96 0.00 3.82
88 89 0.179181 CACCATGATCTTGCGTGTGC 60.179 55.000 15.81 0.00 43.20 4.57
121 122 6.956202 TTTTTGAAATTACTACGTTCCCCA 57.044 33.333 0.00 0.00 0.00 4.96
122 123 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
123 124 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
124 125 4.970711 TGAAATTACTACGTTCCCCAACA 58.029 39.130 0.00 0.00 32.14 3.33
125 126 5.374921 TGAAATTACTACGTTCCCCAACAA 58.625 37.500 0.00 0.00 32.14 2.83
126 127 5.826737 TGAAATTACTACGTTCCCCAACAAA 59.173 36.000 0.00 0.00 32.14 2.83
127 128 5.694231 AATTACTACGTTCCCCAACAAAC 57.306 39.130 0.00 0.00 32.14 2.93
128 129 1.971481 ACTACGTTCCCCAACAAACC 58.029 50.000 0.00 0.00 32.14 3.27
129 130 1.491754 ACTACGTTCCCCAACAAACCT 59.508 47.619 0.00 0.00 32.14 3.50
130 131 2.092267 ACTACGTTCCCCAACAAACCTT 60.092 45.455 0.00 0.00 32.14 3.50
131 132 1.855295 ACGTTCCCCAACAAACCTTT 58.145 45.000 0.00 0.00 32.14 3.11
132 133 1.478916 ACGTTCCCCAACAAACCTTTG 59.521 47.619 0.00 0.00 43.62 2.77
133 134 1.804746 CGTTCCCCAACAAACCTTTGC 60.805 52.381 0.00 0.00 41.79 3.68
134 135 1.484653 GTTCCCCAACAAACCTTTGCT 59.515 47.619 0.00 0.00 41.79 3.91
135 136 1.872773 TCCCCAACAAACCTTTGCTT 58.127 45.000 0.00 0.00 41.79 3.91
136 137 1.484240 TCCCCAACAAACCTTTGCTTG 59.516 47.619 0.00 2.96 41.79 4.01
137 138 1.484240 CCCCAACAAACCTTTGCTTGA 59.516 47.619 11.47 0.00 41.79 3.02
138 139 2.104622 CCCCAACAAACCTTTGCTTGAT 59.895 45.455 11.47 0.00 41.79 2.57
139 140 3.132925 CCCAACAAACCTTTGCTTGATG 58.867 45.455 11.47 0.00 41.79 3.07
140 141 2.545106 CCAACAAACCTTTGCTTGATGC 59.455 45.455 11.47 0.00 41.79 3.91
141 142 2.531522 ACAAACCTTTGCTTGATGCC 57.468 45.000 0.00 0.00 41.79 4.40
142 143 2.041701 ACAAACCTTTGCTTGATGCCT 58.958 42.857 0.00 0.00 41.79 4.75
143 144 2.435437 ACAAACCTTTGCTTGATGCCTT 59.565 40.909 0.00 0.00 41.79 4.35
144 145 2.803956 CAAACCTTTGCTTGATGCCTTG 59.196 45.455 0.00 0.00 42.00 3.61
145 146 0.971386 ACCTTTGCTTGATGCCTTGG 59.029 50.000 0.00 0.00 42.00 3.61
146 147 0.390735 CCTTTGCTTGATGCCTTGGC 60.391 55.000 4.43 4.43 42.00 4.52
147 148 0.390735 CTTTGCTTGATGCCTTGGCC 60.391 55.000 9.35 0.00 42.00 5.36
148 149 0.832983 TTTGCTTGATGCCTTGGCCT 60.833 50.000 3.32 0.00 42.00 5.19
149 150 1.537814 TTGCTTGATGCCTTGGCCTG 61.538 55.000 3.32 0.00 42.00 4.85
150 151 1.980772 GCTTGATGCCTTGGCCTGT 60.981 57.895 3.32 0.00 35.15 4.00
151 152 1.888018 CTTGATGCCTTGGCCTGTG 59.112 57.895 3.32 0.00 0.00 3.66
152 153 2.221906 CTTGATGCCTTGGCCTGTGC 62.222 60.000 3.32 3.92 0.00 4.57
153 154 2.362120 GATGCCTTGGCCTGTGCT 60.362 61.111 3.32 0.00 37.74 4.40
154 155 1.980772 GATGCCTTGGCCTGTGCTT 60.981 57.895 3.32 1.40 37.74 3.91
155 156 2.221906 GATGCCTTGGCCTGTGCTTG 62.222 60.000 3.32 0.00 37.74 4.01
156 157 4.368543 GCCTTGGCCTGTGCTTGC 62.369 66.667 3.32 0.00 37.74 4.01
163 164 2.203684 CCTGTGCTTGCCCCCTTT 60.204 61.111 0.00 0.00 0.00 3.11
164 165 2.576832 CCTGTGCTTGCCCCCTTTG 61.577 63.158 0.00 0.00 0.00 2.77
165 166 3.230522 CTGTGCTTGCCCCCTTTGC 62.231 63.158 0.00 0.00 0.00 3.68
166 167 3.233231 GTGCTTGCCCCCTTTGCA 61.233 61.111 0.00 0.00 36.84 4.08
167 168 3.233231 TGCTTGCCCCCTTTGCAC 61.233 61.111 0.00 0.00 38.72 4.57
168 169 4.007644 GCTTGCCCCCTTTGCACC 62.008 66.667 0.00 0.00 38.72 5.01
169 170 2.523902 CTTGCCCCCTTTGCACCA 60.524 61.111 0.00 0.00 38.72 4.17
170 171 2.041508 TTGCCCCCTTTGCACCAA 60.042 55.556 0.00 0.00 38.72 3.67
171 172 1.690633 TTGCCCCCTTTGCACCAAA 60.691 52.632 0.00 0.00 38.72 3.28
179 180 2.238942 CTTTGCACCAAAGGGGAAAC 57.761 50.000 9.29 0.00 44.75 2.78
180 181 1.484240 CTTTGCACCAAAGGGGAAACA 59.516 47.619 9.29 0.00 44.75 2.83
181 182 1.573108 TTGCACCAAAGGGGAAACAA 58.427 45.000 0.00 0.00 41.15 2.83
182 183 1.118838 TGCACCAAAGGGGAAACAAG 58.881 50.000 0.00 0.00 41.15 3.16
183 184 0.392706 GCACCAAAGGGGAAACAAGG 59.607 55.000 0.00 0.00 41.15 3.61
184 185 2.032151 GCACCAAAGGGGAAACAAGGA 61.032 52.381 0.00 0.00 41.15 3.36
185 186 1.686587 CACCAAAGGGGAAACAAGGAC 59.313 52.381 0.00 0.00 41.15 3.85
186 187 1.289530 ACCAAAGGGGAAACAAGGACA 59.710 47.619 0.00 0.00 41.15 4.02
187 188 2.090775 ACCAAAGGGGAAACAAGGACAT 60.091 45.455 0.00 0.00 41.15 3.06
188 189 2.972021 CCAAAGGGGAAACAAGGACATT 59.028 45.455 0.00 0.00 40.01 2.71
189 190 3.244181 CCAAAGGGGAAACAAGGACATTG 60.244 47.826 0.00 0.00 41.51 2.82
190 191 1.632589 AGGGGAAACAAGGACATTGC 58.367 50.000 0.00 0.00 43.15 3.56
191 192 0.243636 GGGGAAACAAGGACATTGCG 59.756 55.000 0.00 0.00 43.15 4.85
192 193 0.388520 GGGAAACAAGGACATTGCGC 60.389 55.000 0.00 0.00 43.15 6.09
193 194 0.313672 GGAAACAAGGACATTGCGCA 59.686 50.000 5.66 5.66 43.15 6.09
194 195 1.666888 GGAAACAAGGACATTGCGCAG 60.667 52.381 11.31 1.78 43.15 5.18
195 196 0.314935 AAACAAGGACATTGCGCAGG 59.685 50.000 11.31 10.13 43.15 4.85
196 197 2.146073 AACAAGGACATTGCGCAGGC 62.146 55.000 11.31 0.84 43.15 4.85
197 198 3.064324 AAGGACATTGCGCAGGCC 61.064 61.111 13.57 13.57 38.85 5.19
228 229 3.518998 CGTCCGCCTGGTCTCGAT 61.519 66.667 0.00 0.00 36.30 3.59
229 230 2.413765 GTCCGCCTGGTCTCGATC 59.586 66.667 0.00 0.00 36.30 3.69
230 231 3.209812 TCCGCCTGGTCTCGATCG 61.210 66.667 9.36 9.36 36.30 3.69
231 232 3.518998 CCGCCTGGTCTCGATCGT 61.519 66.667 15.94 0.00 0.00 3.73
232 233 2.024871 CGCCTGGTCTCGATCGTC 59.975 66.667 15.94 7.05 0.00 4.20
233 234 2.761195 CGCCTGGTCTCGATCGTCA 61.761 63.158 15.94 8.71 0.00 4.35
234 235 1.736586 GCCTGGTCTCGATCGTCAT 59.263 57.895 15.94 0.00 0.00 3.06
235 236 0.596083 GCCTGGTCTCGATCGTCATG 60.596 60.000 15.94 7.92 0.00 3.07
236 237 0.031314 CCTGGTCTCGATCGTCATGG 59.969 60.000 15.94 7.51 0.00 3.66
237 238 0.596083 CTGGTCTCGATCGTCATGGC 60.596 60.000 15.94 5.70 0.00 4.40
238 239 1.037579 TGGTCTCGATCGTCATGGCT 61.038 55.000 15.94 0.00 0.00 4.75
239 240 0.103208 GGTCTCGATCGTCATGGCTT 59.897 55.000 15.94 0.00 0.00 4.35
240 241 1.203928 GTCTCGATCGTCATGGCTTG 58.796 55.000 15.94 0.00 0.00 4.01
241 242 0.528466 TCTCGATCGTCATGGCTTGC 60.528 55.000 15.94 0.00 0.00 4.01
242 243 1.815212 CTCGATCGTCATGGCTTGCG 61.815 60.000 15.94 9.67 0.00 4.85
243 244 2.167219 CGATCGTCATGGCTTGCGT 61.167 57.895 7.03 5.27 0.00 5.24
244 245 1.638467 GATCGTCATGGCTTGCGTC 59.362 57.895 13.58 9.01 0.00 5.19
245 246 1.079197 ATCGTCATGGCTTGCGTCA 60.079 52.632 13.58 0.00 0.00 4.35
246 247 1.361668 ATCGTCATGGCTTGCGTCAC 61.362 55.000 13.58 0.31 0.00 3.67
247 248 2.476051 GTCATGGCTTGCGTCACG 59.524 61.111 0.00 0.00 0.00 4.35
248 249 2.741985 TCATGGCTTGCGTCACGG 60.742 61.111 0.00 0.00 0.00 4.94
249 250 3.803082 CATGGCTTGCGTCACGGG 61.803 66.667 0.00 0.00 0.00 5.28
250 251 4.329545 ATGGCTTGCGTCACGGGT 62.330 61.111 0.00 0.00 0.00 5.28
251 252 3.842925 ATGGCTTGCGTCACGGGTT 62.843 57.895 0.00 0.00 0.00 4.11
252 253 3.723348 GGCTTGCGTCACGGGTTC 61.723 66.667 0.00 0.00 0.00 3.62
253 254 3.723348 GCTTGCGTCACGGGTTCC 61.723 66.667 0.00 0.00 0.00 3.62
254 255 2.030562 CTTGCGTCACGGGTTCCT 59.969 61.111 0.00 0.00 0.00 3.36
255 256 2.027625 CTTGCGTCACGGGTTCCTC 61.028 63.158 0.00 0.00 0.00 3.71
256 257 3.851845 TTGCGTCACGGGTTCCTCG 62.852 63.158 0.00 0.00 0.00 4.63
269 270 2.494918 CCTCGCGAGGTACCCTTG 59.505 66.667 40.77 17.62 43.61 3.61
274 275 4.617875 CGAGGTACCCTTGCCTTG 57.382 61.111 8.74 0.00 38.11 3.61
275 276 1.980052 CGAGGTACCCTTGCCTTGA 59.020 57.895 8.74 0.00 40.71 3.02
276 277 0.541863 CGAGGTACCCTTGCCTTGAT 59.458 55.000 8.74 0.00 40.71 2.57
277 278 1.473434 CGAGGTACCCTTGCCTTGATC 60.473 57.143 8.74 0.00 40.71 2.92
278 279 1.840635 GAGGTACCCTTGCCTTGATCT 59.159 52.381 8.74 0.00 38.11 2.75
279 280 1.840635 AGGTACCCTTGCCTTGATCTC 59.159 52.381 8.74 0.00 33.07 2.75
280 281 1.840635 GGTACCCTTGCCTTGATCTCT 59.159 52.381 0.00 0.00 0.00 3.10
281 282 2.158885 GGTACCCTTGCCTTGATCTCTC 60.159 54.545 0.00 0.00 0.00 3.20
282 283 1.963985 ACCCTTGCCTTGATCTCTCT 58.036 50.000 0.00 0.00 0.00 3.10
283 284 1.558756 ACCCTTGCCTTGATCTCTCTG 59.441 52.381 0.00 0.00 0.00 3.35
284 285 1.666054 CCTTGCCTTGATCTCTCTGC 58.334 55.000 0.00 0.00 0.00 4.26
285 286 1.666054 CTTGCCTTGATCTCTCTGCC 58.334 55.000 0.00 0.00 0.00 4.85
286 287 1.209990 CTTGCCTTGATCTCTCTGCCT 59.790 52.381 0.00 0.00 0.00 4.75
287 288 0.829333 TGCCTTGATCTCTCTGCCTC 59.171 55.000 0.00 0.00 0.00 4.70
288 289 0.106521 GCCTTGATCTCTCTGCCTCC 59.893 60.000 0.00 0.00 0.00 4.30
289 290 1.792115 CCTTGATCTCTCTGCCTCCT 58.208 55.000 0.00 0.00 0.00 3.69
290 291 2.956132 CCTTGATCTCTCTGCCTCCTA 58.044 52.381 0.00 0.00 0.00 2.94
291 292 2.892852 CCTTGATCTCTCTGCCTCCTAG 59.107 54.545 0.00 0.00 0.00 3.02
292 293 1.993956 TGATCTCTCTGCCTCCTAGC 58.006 55.000 0.00 0.00 0.00 3.42
293 294 0.881118 GATCTCTCTGCCTCCTAGCG 59.119 60.000 0.00 0.00 34.65 4.26
294 295 0.476338 ATCTCTCTGCCTCCTAGCGA 59.524 55.000 0.00 0.00 34.65 4.93
295 296 0.179032 TCTCTCTGCCTCCTAGCGAG 60.179 60.000 0.00 2.23 38.46 5.03
296 297 1.795170 CTCTCTGCCTCCTAGCGAGC 61.795 65.000 0.00 0.00 37.27 5.03
297 298 2.835431 TCTGCCTCCTAGCGAGCC 60.835 66.667 0.00 0.00 37.27 4.70
298 299 2.837291 CTGCCTCCTAGCGAGCCT 60.837 66.667 0.00 0.00 37.27 4.58
299 300 3.149338 CTGCCTCCTAGCGAGCCTG 62.149 68.421 0.00 0.00 37.27 4.85
300 301 4.600576 GCCTCCTAGCGAGCCTGC 62.601 72.222 0.00 0.00 37.27 4.85
301 302 3.922640 CCTCCTAGCGAGCCTGCC 61.923 72.222 0.00 0.00 37.27 4.85
302 303 2.837291 CTCCTAGCGAGCCTGCCT 60.837 66.667 0.00 0.00 34.65 4.75
303 304 3.149338 CTCCTAGCGAGCCTGCCTG 62.149 68.421 0.00 0.00 34.65 4.85
304 305 3.150335 CCTAGCGAGCCTGCCTGA 61.150 66.667 0.00 0.00 34.65 3.86
305 306 2.506061 CCTAGCGAGCCTGCCTGAT 61.506 63.158 0.00 0.00 34.65 2.90
306 307 1.300775 CTAGCGAGCCTGCCTGATG 60.301 63.158 0.00 0.00 34.65 3.07
307 308 1.742324 CTAGCGAGCCTGCCTGATGA 61.742 60.000 0.00 0.00 34.65 2.92
308 309 1.742324 TAGCGAGCCTGCCTGATGAG 61.742 60.000 0.00 0.00 34.65 2.90
309 310 2.108566 CGAGCCTGCCTGATGAGG 59.891 66.667 0.00 0.00 43.19 3.86
319 320 1.482954 CCTGATGAGGCTGTCTCTGA 58.517 55.000 11.02 0.00 42.86 3.27
320 321 1.409790 CCTGATGAGGCTGTCTCTGAG 59.590 57.143 11.02 0.00 42.86 3.35
321 322 1.409790 CTGATGAGGCTGTCTCTGAGG 59.590 57.143 11.02 0.00 42.86 3.86
322 323 1.006400 TGATGAGGCTGTCTCTGAGGA 59.994 52.381 11.02 0.00 42.86 3.71
323 324 2.106566 GATGAGGCTGTCTCTGAGGAA 58.893 52.381 11.02 0.00 42.86 3.36
324 325 1.554836 TGAGGCTGTCTCTGAGGAAG 58.445 55.000 11.02 4.19 42.86 3.46
325 326 0.175531 GAGGCTGTCTCTGAGGAAGC 59.824 60.000 18.43 18.43 39.38 3.86
326 327 0.252193 AGGCTGTCTCTGAGGAAGCT 60.252 55.000 22.82 12.19 34.29 3.74
327 328 0.612744 GGCTGTCTCTGAGGAAGCTT 59.387 55.000 22.82 0.00 34.29 3.74
328 329 1.405391 GGCTGTCTCTGAGGAAGCTTC 60.405 57.143 18.54 18.54 34.29 3.86
339 340 2.777832 GGAAGCTTCCTGTCATCTGT 57.222 50.000 33.98 0.00 44.11 3.41
340 341 2.626840 GGAAGCTTCCTGTCATCTGTC 58.373 52.381 33.98 6.71 44.11 3.51
341 342 2.626840 GAAGCTTCCTGTCATCTGTCC 58.373 52.381 15.97 0.00 0.00 4.02
342 343 0.908198 AGCTTCCTGTCATCTGTCCC 59.092 55.000 0.00 0.00 0.00 4.46
343 344 0.615331 GCTTCCTGTCATCTGTCCCA 59.385 55.000 0.00 0.00 0.00 4.37
344 345 1.677217 GCTTCCTGTCATCTGTCCCAC 60.677 57.143 0.00 0.00 0.00 4.61
345 346 0.608130 TTCCTGTCATCTGTCCCACG 59.392 55.000 0.00 0.00 0.00 4.94
346 347 0.251608 TCCTGTCATCTGTCCCACGA 60.252 55.000 0.00 0.00 0.00 4.35
347 348 0.174389 CCTGTCATCTGTCCCACGAG 59.826 60.000 0.00 0.00 0.00 4.18
348 349 0.174389 CTGTCATCTGTCCCACGAGG 59.826 60.000 0.00 0.00 0.00 4.63
349 350 1.153549 GTCATCTGTCCCACGAGGC 60.154 63.158 0.00 0.00 34.51 4.70
350 351 1.305297 TCATCTGTCCCACGAGGCT 60.305 57.895 0.00 0.00 34.51 4.58
351 352 0.904865 TCATCTGTCCCACGAGGCTT 60.905 55.000 0.00 0.00 34.51 4.35
352 353 0.742281 CATCTGTCCCACGAGGCTTG 60.742 60.000 0.00 0.00 34.51 4.01
353 354 1.903877 ATCTGTCCCACGAGGCTTGG 61.904 60.000 6.71 2.09 34.51 3.61
354 355 4.329545 TGTCCCACGAGGCTTGGC 62.330 66.667 6.71 0.00 34.51 4.52
373 374 2.492090 CCTCGCGAGGGTCTTGAG 59.508 66.667 41.47 17.83 44.87 3.02
374 375 2.202676 CTCGCGAGGGTCTTGAGC 60.203 66.667 28.40 0.00 0.00 4.26
375 376 2.676822 TCGCGAGGGTCTTGAGCT 60.677 61.111 3.71 0.00 0.00 4.09
376 377 2.219325 CTCGCGAGGGTCTTGAGCTT 62.219 60.000 28.40 0.00 0.00 3.74
377 378 2.097038 CGCGAGGGTCTTGAGCTTG 61.097 63.158 0.00 0.00 0.00 4.01
378 379 1.293498 GCGAGGGTCTTGAGCTTGA 59.707 57.895 0.00 0.00 0.00 3.02
379 380 0.739112 GCGAGGGTCTTGAGCTTGAG 60.739 60.000 0.00 0.00 0.00 3.02
380 381 0.739112 CGAGGGTCTTGAGCTTGAGC 60.739 60.000 0.00 0.00 42.49 4.26
392 393 1.005340 GCTTGAGCTGATGAAGACGG 58.995 55.000 0.00 0.00 38.21 4.79
393 394 1.005340 CTTGAGCTGATGAAGACGGC 58.995 55.000 0.00 0.00 39.61 5.68
394 395 0.391661 TTGAGCTGATGAAGACGGCC 60.392 55.000 0.00 0.00 40.10 6.13
395 396 1.219124 GAGCTGATGAAGACGGCCA 59.781 57.895 2.24 0.00 40.10 5.36
396 397 1.078848 AGCTGATGAAGACGGCCAC 60.079 57.895 2.24 0.00 40.10 5.01
398 399 2.434185 TGATGAAGACGGCCACGC 60.434 61.111 2.24 0.00 46.04 5.34
399 400 2.125512 GATGAAGACGGCCACGCT 60.126 61.111 2.24 0.00 46.04 5.07
400 401 2.434884 ATGAAGACGGCCACGCTG 60.435 61.111 2.24 0.00 46.04 5.18
401 402 3.958147 ATGAAGACGGCCACGCTGG 62.958 63.158 2.24 0.25 46.04 4.85
444 445 4.711949 CCGCAGGCAGGCAAGTCT 62.712 66.667 0.00 0.00 46.14 3.24
445 446 3.429141 CGCAGGCAGGCAAGTCTG 61.429 66.667 7.14 7.14 43.93 3.51
446 447 3.060615 GCAGGCAGGCAAGTCTGG 61.061 66.667 12.46 0.00 41.45 3.86
447 448 2.360852 CAGGCAGGCAAGTCTGGG 60.361 66.667 3.62 0.00 37.58 4.45
448 449 2.530151 AGGCAGGCAAGTCTGGGA 60.530 61.111 3.62 0.00 35.43 4.37
449 450 2.156098 AGGCAGGCAAGTCTGGGAA 61.156 57.895 3.62 0.00 35.43 3.97
450 451 1.973812 GGCAGGCAAGTCTGGGAAC 60.974 63.158 3.62 0.00 35.43 3.62
462 463 2.035155 GGGAACCCCCGTTTCCAG 59.965 66.667 0.00 0.00 45.99 3.86
463 464 2.531601 GGGAACCCCCGTTTCCAGA 61.532 63.158 0.00 0.00 45.99 3.86
464 465 1.457165 GGAACCCCCGTTTCCAGAA 59.543 57.895 0.00 0.00 30.30 3.02
465 466 0.892358 GGAACCCCCGTTTCCAGAAC 60.892 60.000 0.00 0.00 30.30 3.01
466 467 1.228033 AACCCCCGTTTCCAGAACG 60.228 57.895 4.46 4.46 42.74 3.95
467 468 3.053896 CCCCCGTTTCCAGAACGC 61.054 66.667 5.83 0.00 41.85 4.84
468 469 3.053896 CCCCGTTTCCAGAACGCC 61.054 66.667 5.83 0.00 41.85 5.68
469 470 3.419759 CCCGTTTCCAGAACGCCG 61.420 66.667 5.83 0.00 41.85 6.46
470 471 2.356553 CCGTTTCCAGAACGCCGA 60.357 61.111 5.83 0.00 41.85 5.54
471 472 2.664436 CCGTTTCCAGAACGCCGAC 61.664 63.158 5.83 0.00 41.85 4.79
472 473 1.952133 CGTTTCCAGAACGCCGACA 60.952 57.895 0.00 0.00 36.82 4.35
493 494 4.021925 ACCCAGCCCGCTCAAGAC 62.022 66.667 0.00 0.00 0.00 3.01
499 500 2.892640 CCCGCTCAAGACCGATCA 59.107 61.111 0.00 0.00 0.00 2.92
500 501 1.443407 CCCGCTCAAGACCGATCAT 59.557 57.895 0.00 0.00 0.00 2.45
502 503 0.933097 CCGCTCAAGACCGATCATTG 59.067 55.000 0.00 0.00 0.00 2.82
507 508 3.813443 CTCAAGACCGATCATTGGGATT 58.187 45.455 0.00 0.00 36.00 3.01
514 515 2.549926 CGATCATTGGGATTGACGTGA 58.450 47.619 0.00 0.00 39.43 4.35
518 519 4.485016 ATCATTGGGATTGACGTGAGTGC 61.485 47.826 0.00 0.00 37.44 4.40
535 536 5.858381 TGAGTGCCTCACCTGATATATTTC 58.142 41.667 1.25 0.00 35.39 2.17
538 539 4.042187 GTGCCTCACCTGATATATTTCCCT 59.958 45.833 0.00 0.00 0.00 4.20
550 551 2.808906 ATTTCCCTCTTGCAGGTACC 57.191 50.000 2.73 2.73 41.51 3.34
557 558 0.317160 TCTTGCAGGTACCTCACACG 59.683 55.000 12.84 11.25 0.00 4.49
567 568 1.136984 CCTCACACGTCTACGAGCC 59.863 63.158 9.86 0.00 43.02 4.70
576 577 0.527817 GTCTACGAGCCATTCACGGG 60.528 60.000 0.00 0.00 32.98 5.28
585 586 1.037030 CCATTCACGGGGTTGGATGG 61.037 60.000 0.91 0.00 44.67 3.51
590 591 2.354729 CGGGGTTGGATGGCTTCA 59.645 61.111 2.60 0.00 0.00 3.02
593 594 0.394899 GGGGTTGGATGGCTTCAGAG 60.395 60.000 2.60 0.00 0.00 3.35
600 601 2.026822 TGGATGGCTTCAGAGGTTTCTC 60.027 50.000 2.60 0.00 40.25 2.87
605 606 3.244353 TGGCTTCAGAGGTTTCTCAAGAG 60.244 47.826 0.00 0.00 42.34 2.85
606 607 3.244387 GGCTTCAGAGGTTTCTCAAGAGT 60.244 47.826 0.00 0.00 42.34 3.24
615 616 3.994392 GGTTTCTCAAGAGTTGTCGCATA 59.006 43.478 0.00 0.00 0.00 3.14
647 648 9.742144 AGATTATAGATCTTGGTAGACACGTAT 57.258 33.333 0.00 0.00 31.99 3.06
650 651 5.502153 AGATCTTGGTAGACACGTATCAC 57.498 43.478 0.00 0.00 31.99 3.06
653 654 4.157289 ATCTTGGTAGACACGTATCACGTT 59.843 41.667 0.86 0.00 42.20 3.99
664 665 3.311106 CGTATCACGTTTGTGTAGTGGT 58.689 45.455 0.00 0.00 46.49 4.16
700 701 1.154131 GTGTTGTGTGTTGTGCGCA 60.154 52.632 5.66 5.66 34.86 6.09
705 706 1.370414 GTGTGTTGTGCGCATGGTC 60.370 57.895 15.91 0.00 40.03 4.02
706 707 1.525765 TGTGTTGTGCGCATGGTCT 60.526 52.632 15.91 0.00 31.84 3.85
707 708 0.250081 TGTGTTGTGCGCATGGTCTA 60.250 50.000 15.91 0.00 31.84 2.59
708 709 1.086696 GTGTTGTGCGCATGGTCTAT 58.913 50.000 15.91 0.00 0.00 1.98
709 710 1.085893 TGTTGTGCGCATGGTCTATG 58.914 50.000 15.91 0.00 39.88 2.23
710 711 0.378257 GTTGTGCGCATGGTCTATGG 59.622 55.000 15.91 0.00 37.26 2.74
719 720 3.722147 GCATGGTCTATGGCCTATATCG 58.278 50.000 3.32 0.00 37.26 2.92
759 760 5.010012 GGTGTCACCAATGATCTTTCAACTT 59.990 40.000 17.59 0.00 38.42 2.66
762 763 7.591426 GTGTCACCAATGATCTTTCAACTTAAC 59.409 37.037 0.00 0.00 37.14 2.01
767 768 8.137437 ACCAATGATCTTTCAACTTAACAACAG 58.863 33.333 0.00 0.00 34.96 3.16
777 778 9.669887 TTTCAACTTAACAACAGGTCTAAGTTA 57.330 29.630 5.92 0.00 39.06 2.24
779 780 7.440255 TCAACTTAACAACAGGTCTAAGTTAGC 59.560 37.037 4.93 0.91 39.06 3.09
829 831 8.592529 TTAATCATCAAAATCTGATTCCCACA 57.407 30.769 2.92 0.00 42.46 4.17
864 1192 3.340034 ACGATCTTTCCCACGCAAAATA 58.660 40.909 0.00 0.00 0.00 1.40
866 1194 4.216687 ACGATCTTTCCCACGCAAAATAAA 59.783 37.500 0.00 0.00 0.00 1.40
867 1195 5.157781 CGATCTTTCCCACGCAAAATAAAA 58.842 37.500 0.00 0.00 0.00 1.52
868 1196 5.804979 CGATCTTTCCCACGCAAAATAAAAT 59.195 36.000 0.00 0.00 0.00 1.82
871 1199 9.145865 GATCTTTCCCACGCAAAATAAAATTTA 57.854 29.630 0.00 0.00 0.00 1.40
872 1200 8.888579 TCTTTCCCACGCAAAATAAAATTTAA 57.111 26.923 0.00 0.00 0.00 1.52
929 1263 6.882768 ATAATACTCCATTCTCCATCCTCC 57.117 41.667 0.00 0.00 0.00 4.30
930 1264 1.418334 ACTCCATTCTCCATCCTCCG 58.582 55.000 0.00 0.00 0.00 4.63
941 1275 0.673985 CATCCTCCGTTCGCCTCATA 59.326 55.000 0.00 0.00 0.00 2.15
956 1290 7.340122 TCGCCTCATATAAGATTATCTCCTG 57.660 40.000 0.00 0.00 0.00 3.86
958 1292 7.067615 TCGCCTCATATAAGATTATCTCCTGAC 59.932 40.741 0.00 0.00 0.00 3.51
1581 1922 4.697756 CAAGAGGGCGGCGAACCA 62.698 66.667 12.98 0.00 34.57 3.67
1685 2026 2.262915 GTGGTCGGAGCCTGTGAG 59.737 66.667 4.54 0.00 0.00 3.51
1730 2073 0.451783 CTTAAGGTTGGCACGATGGC 59.548 55.000 0.00 0.00 44.03 4.40
1737 2080 4.256090 GGCACGATGGCGAATGGC 62.256 66.667 0.00 0.00 41.64 4.40
1751 2094 2.541556 GAATGGCTTCGTCTACTGGAC 58.458 52.381 0.00 0.00 41.28 4.02
1975 2318 7.607991 AGACATGGATATTCGACAAGAAGTTTT 59.392 33.333 0.00 0.00 42.92 2.43
2017 2366 3.003480 GTCACTGAGGGTACATTTGAGC 58.997 50.000 0.00 0.00 0.00 4.26
2178 2527 1.004745 AGGAGATTTGACGGCCATGTT 59.995 47.619 2.24 0.00 0.00 2.71
2236 2585 3.117512 AGACAACAAGGTGAACCCTCAAT 60.118 43.478 0.00 0.00 45.47 2.57
2254 2609 3.003275 TCAATTCGAAGGTGCTTGACAAC 59.997 43.478 3.35 0.00 35.58 3.32
2334 2693 9.988815 AGTAATGATATGTTCAAGGTGATAGAC 57.011 33.333 0.00 0.00 38.03 2.59
2337 2696 8.668510 ATGATATGTTCAAGGTGATAGACAAC 57.331 34.615 0.00 0.00 38.03 3.32
2341 2700 5.063204 TGTTCAAGGTGATAGACAACAAGG 58.937 41.667 0.00 0.00 38.92 3.61
2342 2701 4.974645 TCAAGGTGATAGACAACAAGGT 57.025 40.909 0.00 0.00 38.92 3.50
2344 2703 4.346709 TCAAGGTGATAGACAACAAGGTGA 59.653 41.667 0.00 0.00 38.92 4.02
2345 2704 4.974645 AGGTGATAGACAACAAGGTGAA 57.025 40.909 0.00 0.00 38.92 3.18
2349 2895 3.392947 TGATAGACAACAAGGTGAACCCA 59.607 43.478 0.00 0.00 36.42 4.51
2474 3028 6.771267 GGAGATTCCACCTTTTAATCGGTATT 59.229 38.462 0.00 0.00 36.28 1.89
2544 3099 9.559958 CAGAATTTGGACTGTTCATATGTAAAC 57.440 33.333 1.90 1.55 0.00 2.01
2580 3135 7.125053 AGGTTCCACTTGGTCTTTTTATTTTCA 59.875 33.333 0.00 0.00 36.34 2.69
2606 3163 3.342377 TCACTCTGTTGTTGTGTTCCA 57.658 42.857 0.00 0.00 33.82 3.53
2823 3382 3.882888 TCTTGACAATTGGTGGTTGACTC 59.117 43.478 10.83 0.00 0.00 3.36
2831 3390 2.029844 GTGGTTGACTCGCTCTGGC 61.030 63.158 0.00 0.00 0.00 4.85
2871 3430 5.450818 ACATGCCTTTTTACATCTAGGGA 57.549 39.130 0.00 0.00 32.45 4.20
2916 3476 4.342862 TTCAGAGCATAGTTCCTATGGC 57.657 45.455 11.96 5.78 42.71 4.40
2926 3486 1.207329 GTTCCTATGGCACGAAGACCT 59.793 52.381 0.00 0.00 0.00 3.85
2949 3509 9.117223 ACCTACATATTAGGAAATATTGCCTCT 57.883 33.333 19.05 10.12 36.36 3.69
2958 3518 7.775053 AGGAAATATTGCCTCTGTAAACAAA 57.225 32.000 9.47 0.00 0.00 2.83
2967 3527 7.859325 TGCCTCTGTAAACAAATATAAGACC 57.141 36.000 0.00 0.00 0.00 3.85
2968 3528 6.537301 TGCCTCTGTAAACAAATATAAGACCG 59.463 38.462 0.00 0.00 0.00 4.79
2969 3529 6.759827 GCCTCTGTAAACAAATATAAGACCGA 59.240 38.462 0.00 0.00 0.00 4.69
2970 3530 7.441458 GCCTCTGTAAACAAATATAAGACCGAT 59.559 37.037 0.00 0.00 0.00 4.18
2971 3531 9.326413 CCTCTGTAAACAAATATAAGACCGATT 57.674 33.333 0.00 0.00 0.00 3.34
3007 3591 7.046033 ACGGTCTTATATTTGTTTACAGAGGG 58.954 38.462 0.00 0.00 0.00 4.30
3046 3634 1.141053 GGCCTATACTTGTGGACCCAG 59.859 57.143 0.00 0.00 0.00 4.45
3114 3713 3.628032 GGTCTTACTAGCAAAATGGCTCC 59.372 47.826 0.00 0.00 44.54 4.70
3128 3727 4.820894 ATGGCTCCGTAAACTTAAGACT 57.179 40.909 10.09 0.00 0.00 3.24
3129 3728 3.921677 TGGCTCCGTAAACTTAAGACTG 58.078 45.455 10.09 0.00 0.00 3.51
3153 3752 2.550830 TCACCTCTGGCAGAAACTTC 57.449 50.000 19.29 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.379316 GACAACGGAAGCGTTTGGTT 59.621 50.000 0.00 0.00 38.83 3.67
1 2 1.768112 CGACAACGGAAGCGTTTGGT 61.768 55.000 0.00 0.00 35.72 3.67
2 3 1.083015 CGACAACGGAAGCGTTTGG 60.083 57.895 0.00 0.00 35.72 3.28
13 14 0.316204 ACCCTTGTAGACCGACAACG 59.684 55.000 0.00 0.00 34.40 4.10
14 15 2.669391 CGTACCCTTGTAGACCGACAAC 60.669 54.545 0.00 0.00 34.40 3.32
15 16 1.541147 CGTACCCTTGTAGACCGACAA 59.459 52.381 0.00 0.00 36.98 3.18
16 17 1.167851 CGTACCCTTGTAGACCGACA 58.832 55.000 0.00 0.00 0.00 4.35
17 18 1.168714 ACGTACCCTTGTAGACCGAC 58.831 55.000 0.00 0.00 0.00 4.79
18 19 2.236146 TCTACGTACCCTTGTAGACCGA 59.764 50.000 4.74 0.00 41.47 4.69
19 20 2.632377 TCTACGTACCCTTGTAGACCG 58.368 52.381 4.74 0.00 41.47 4.79
23 24 4.639310 AGTGTGATCTACGTACCCTTGTAG 59.361 45.833 0.00 0.62 39.50 2.74
24 25 4.592942 AGTGTGATCTACGTACCCTTGTA 58.407 43.478 0.00 0.00 0.00 2.41
25 26 3.428532 AGTGTGATCTACGTACCCTTGT 58.571 45.455 0.00 0.00 0.00 3.16
26 27 3.695060 AGAGTGTGATCTACGTACCCTTG 59.305 47.826 0.00 0.00 0.00 3.61
27 28 3.946558 GAGAGTGTGATCTACGTACCCTT 59.053 47.826 0.00 0.00 0.00 3.95
28 29 3.543665 GAGAGTGTGATCTACGTACCCT 58.456 50.000 0.00 0.00 0.00 4.34
29 30 2.617774 GGAGAGTGTGATCTACGTACCC 59.382 54.545 0.00 0.00 0.00 3.69
30 31 2.617774 GGGAGAGTGTGATCTACGTACC 59.382 54.545 0.00 0.62 30.07 3.34
31 32 2.617774 GGGGAGAGTGTGATCTACGTAC 59.382 54.545 0.00 0.00 30.07 3.67
32 33 2.508716 AGGGGAGAGTGTGATCTACGTA 59.491 50.000 0.00 0.00 30.07 3.57
33 34 1.285373 AGGGGAGAGTGTGATCTACGT 59.715 52.381 0.00 0.00 30.07 3.57
34 35 1.950909 GAGGGGAGAGTGTGATCTACG 59.049 57.143 0.00 0.00 30.07 3.51
35 36 3.219281 GAGAGGGGAGAGTGTGATCTAC 58.781 54.545 0.00 0.00 0.00 2.59
36 37 2.158740 CGAGAGGGGAGAGTGTGATCTA 60.159 54.545 0.00 0.00 0.00 1.98
37 38 1.409521 CGAGAGGGGAGAGTGTGATCT 60.410 57.143 0.00 0.00 0.00 2.75
38 39 1.028905 CGAGAGGGGAGAGTGTGATC 58.971 60.000 0.00 0.00 0.00 2.92
39 40 0.333312 ACGAGAGGGGAGAGTGTGAT 59.667 55.000 0.00 0.00 0.00 3.06
40 41 0.112606 AACGAGAGGGGAGAGTGTGA 59.887 55.000 0.00 0.00 0.00 3.58
41 42 0.244994 CAACGAGAGGGGAGAGTGTG 59.755 60.000 0.00 0.00 0.00 3.82
42 43 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
43 44 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
44 45 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
45 46 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
46 47 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
47 48 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
48 49 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
49 50 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
50 51 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
51 52 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
52 53 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
53 54 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
54 55 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
55 56 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
56 57 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
57 58 3.819337 AGATCATGGTGATGCATAGCAAC 59.181 43.478 0.00 0.00 43.62 4.17
58 59 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
59 60 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
60 61 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
61 62 3.120304 CGCAAGATCATGGTGATGCATAG 60.120 47.826 0.00 0.00 37.20 2.23
62 63 2.809696 CGCAAGATCATGGTGATGCATA 59.190 45.455 0.00 0.00 37.20 3.14
63 64 1.607148 CGCAAGATCATGGTGATGCAT 59.393 47.619 0.00 0.00 37.20 3.96
64 65 1.018910 CGCAAGATCATGGTGATGCA 58.981 50.000 11.83 0.00 37.20 3.96
65 66 1.019673 ACGCAAGATCATGGTGATGC 58.980 50.000 0.00 3.06 37.20 3.91
66 67 2.011947 ACACGCAAGATCATGGTGATG 58.988 47.619 19.56 8.58 37.20 3.07
67 68 2.011947 CACACGCAAGATCATGGTGAT 58.988 47.619 19.56 0.00 40.34 3.06
68 69 1.441738 CACACGCAAGATCATGGTGA 58.558 50.000 19.56 0.00 43.62 4.02
69 70 0.179181 GCACACGCAAGATCATGGTG 60.179 55.000 14.17 14.17 43.62 4.17
70 71 1.638388 CGCACACGCAAGATCATGGT 61.638 55.000 0.00 0.00 43.62 3.55
71 72 1.061411 CGCACACGCAAGATCATGG 59.939 57.895 0.00 0.00 43.62 3.66
72 73 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
73 74 1.135112 TCTACGCACACGCAAGATCAT 60.135 47.619 0.00 0.00 45.53 2.45
74 75 0.242555 TCTACGCACACGCAAGATCA 59.757 50.000 0.00 0.00 45.53 2.92
75 76 1.346365 TTCTACGCACACGCAAGATC 58.654 50.000 0.00 0.00 45.53 2.75
76 77 2.010145 ATTCTACGCACACGCAAGAT 57.990 45.000 0.00 0.00 45.53 2.40
77 78 2.640346 TATTCTACGCACACGCAAGA 57.360 45.000 0.00 0.00 45.53 3.02
78 79 3.925688 AATATTCTACGCACACGCAAG 57.074 42.857 0.00 0.00 45.53 4.01
79 80 4.671880 AAAATATTCTACGCACACGCAA 57.328 36.364 0.00 0.00 45.53 4.85
80 81 4.671880 AAAAATATTCTACGCACACGCA 57.328 36.364 0.00 0.00 45.53 5.24
98 99 6.956202 TGGGGAACGTAGTAATTTCAAAAA 57.044 33.333 0.00 0.00 45.00 1.94
99 100 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
100 101 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
101 102 5.374921 TGTTGGGGAACGTAGTAATTTCAA 58.625 37.500 0.00 0.00 45.00 2.69
102 103 4.970711 TGTTGGGGAACGTAGTAATTTCA 58.029 39.130 0.00 0.00 45.00 2.69
103 104 5.945466 TTGTTGGGGAACGTAGTAATTTC 57.055 39.130 0.00 0.00 45.00 2.17
104 105 5.009911 GGTTTGTTGGGGAACGTAGTAATTT 59.990 40.000 0.00 0.00 45.00 1.82
105 106 4.520111 GGTTTGTTGGGGAACGTAGTAATT 59.480 41.667 0.00 0.00 45.00 1.40
106 107 4.074259 GGTTTGTTGGGGAACGTAGTAAT 58.926 43.478 0.00 0.00 45.00 1.89
107 108 3.136260 AGGTTTGTTGGGGAACGTAGTAA 59.864 43.478 0.00 0.00 45.00 2.24
108 109 2.705127 AGGTTTGTTGGGGAACGTAGTA 59.295 45.455 0.00 0.00 45.00 1.82
109 110 5.701569 CAAAGGTTTGTTGGGGAACGTAGT 61.702 45.833 0.00 0.00 36.21 2.73
110 111 2.265589 AGGTTTGTTGGGGAACGTAG 57.734 50.000 0.00 0.00 0.00 3.51
111 112 2.688958 CAAAGGTTTGTTGGGGAACGTA 59.311 45.455 0.00 0.00 33.59 3.57
112 113 1.478916 CAAAGGTTTGTTGGGGAACGT 59.521 47.619 0.00 0.00 33.59 3.99
113 114 1.804746 GCAAAGGTTTGTTGGGGAACG 60.805 52.381 4.45 0.00 40.24 3.95
114 115 1.484653 AGCAAAGGTTTGTTGGGGAAC 59.515 47.619 4.45 0.00 40.24 3.62
115 116 1.872773 AGCAAAGGTTTGTTGGGGAA 58.127 45.000 4.45 0.00 40.24 3.97
116 117 1.484240 CAAGCAAAGGTTTGTTGGGGA 59.516 47.619 4.45 0.00 40.24 4.81
117 118 1.484240 TCAAGCAAAGGTTTGTTGGGG 59.516 47.619 4.45 0.00 40.24 4.96
118 119 2.977772 TCAAGCAAAGGTTTGTTGGG 57.022 45.000 4.45 0.00 40.24 4.12
119 120 2.545106 GCATCAAGCAAAGGTTTGTTGG 59.455 45.455 4.45 0.00 44.79 3.77
120 121 3.865224 GCATCAAGCAAAGGTTTGTTG 57.135 42.857 4.45 7.55 44.79 3.33
132 133 1.980772 ACAGGCCAAGGCATCAAGC 60.981 57.895 13.87 0.00 44.11 4.01
133 134 1.888018 CACAGGCCAAGGCATCAAG 59.112 57.895 13.87 0.00 44.11 3.02
134 135 2.277591 GCACAGGCCAAGGCATCAA 61.278 57.895 13.87 0.00 44.11 2.57
135 136 2.677524 GCACAGGCCAAGGCATCA 60.678 61.111 13.87 0.00 44.11 3.07
136 137 1.980772 AAGCACAGGCCAAGGCATC 60.981 57.895 13.87 0.00 44.11 3.91
137 138 2.118951 AAGCACAGGCCAAGGCAT 59.881 55.556 13.87 2.09 44.11 4.40
138 139 2.913578 CAAGCACAGGCCAAGGCA 60.914 61.111 13.87 0.00 44.11 4.75
139 140 4.368543 GCAAGCACAGGCCAAGGC 62.369 66.667 5.01 4.72 42.56 4.35
146 147 2.203684 AAAGGGGGCAAGCACAGG 60.204 61.111 0.00 0.00 0.00 4.00
147 148 3.053828 CAAAGGGGGCAAGCACAG 58.946 61.111 0.00 0.00 0.00 3.66
148 149 3.233231 GCAAAGGGGGCAAGCACA 61.233 61.111 0.00 0.00 0.00 4.57
149 150 3.233231 TGCAAAGGGGGCAAGCAC 61.233 61.111 0.00 0.00 38.54 4.40
150 151 3.233231 GTGCAAAGGGGGCAAGCA 61.233 61.111 0.00 0.00 43.91 3.91
151 152 4.007644 GGTGCAAAGGGGGCAAGC 62.008 66.667 0.00 0.00 43.91 4.01
152 153 1.694133 TTTGGTGCAAAGGGGGCAAG 61.694 55.000 0.00 0.00 43.91 4.01
153 154 1.690633 TTTGGTGCAAAGGGGGCAA 60.691 52.632 0.00 0.00 43.91 4.52
154 155 2.041508 TTTGGTGCAAAGGGGGCA 60.042 55.556 0.00 0.00 39.32 5.36
155 156 2.743060 CTTTGGTGCAAAGGGGGC 59.257 61.111 0.00 0.00 44.75 5.80
161 162 1.573108 TGTTTCCCCTTTGGTGCAAA 58.427 45.000 0.00 0.00 34.77 3.68
162 163 1.484240 CTTGTTTCCCCTTTGGTGCAA 59.516 47.619 0.00 0.00 34.77 4.08
163 164 1.118838 CTTGTTTCCCCTTTGGTGCA 58.881 50.000 0.00 0.00 34.77 4.57
164 165 0.392706 CCTTGTTTCCCCTTTGGTGC 59.607 55.000 0.00 0.00 34.77 5.01
165 166 1.686587 GTCCTTGTTTCCCCTTTGGTG 59.313 52.381 0.00 0.00 34.77 4.17
166 167 1.289530 TGTCCTTGTTTCCCCTTTGGT 59.710 47.619 0.00 0.00 34.77 3.67
167 168 2.080654 TGTCCTTGTTTCCCCTTTGG 57.919 50.000 0.00 0.00 0.00 3.28
168 169 3.803368 GCAATGTCCTTGTTTCCCCTTTG 60.803 47.826 0.00 0.00 37.18 2.77
169 170 2.368548 GCAATGTCCTTGTTTCCCCTTT 59.631 45.455 0.00 0.00 37.18 3.11
170 171 1.970640 GCAATGTCCTTGTTTCCCCTT 59.029 47.619 0.00 0.00 37.18 3.95
171 172 1.632589 GCAATGTCCTTGTTTCCCCT 58.367 50.000 0.00 0.00 37.18 4.79
172 173 0.243636 CGCAATGTCCTTGTTTCCCC 59.756 55.000 0.00 0.00 37.18 4.81
173 174 0.388520 GCGCAATGTCCTTGTTTCCC 60.389 55.000 0.30 0.00 37.18 3.97
174 175 0.313672 TGCGCAATGTCCTTGTTTCC 59.686 50.000 8.16 0.00 37.18 3.13
175 176 1.666888 CCTGCGCAATGTCCTTGTTTC 60.667 52.381 13.05 0.00 37.18 2.78
176 177 0.314935 CCTGCGCAATGTCCTTGTTT 59.685 50.000 13.05 0.00 37.18 2.83
177 178 1.959085 CCTGCGCAATGTCCTTGTT 59.041 52.632 13.05 0.00 37.18 2.83
178 179 2.629656 GCCTGCGCAATGTCCTTGT 61.630 57.895 13.05 0.00 37.18 3.16
179 180 2.180017 GCCTGCGCAATGTCCTTG 59.820 61.111 13.05 0.00 37.94 3.61
180 181 3.064324 GGCCTGCGCAATGTCCTT 61.064 61.111 13.05 0.00 36.38 3.36
211 212 3.471244 GATCGAGACCAGGCGGACG 62.471 68.421 2.43 5.56 35.59 4.79
212 213 2.413765 GATCGAGACCAGGCGGAC 59.586 66.667 2.43 0.00 35.59 4.79
213 214 3.209812 CGATCGAGACCAGGCGGA 61.210 66.667 10.26 0.00 35.59 5.54
214 215 3.471244 GACGATCGAGACCAGGCGG 62.471 68.421 24.34 0.00 38.77 6.13
215 216 2.024871 GACGATCGAGACCAGGCG 59.975 66.667 24.34 0.00 0.00 5.52
216 217 0.596083 CATGACGATCGAGACCAGGC 60.596 60.000 24.34 0.00 0.00 4.85
217 218 0.031314 CCATGACGATCGAGACCAGG 59.969 60.000 24.34 14.27 0.00 4.45
218 219 0.596083 GCCATGACGATCGAGACCAG 60.596 60.000 24.34 6.77 0.00 4.00
219 220 1.037579 AGCCATGACGATCGAGACCA 61.038 55.000 24.34 13.64 0.00 4.02
220 221 0.103208 AAGCCATGACGATCGAGACC 59.897 55.000 24.34 8.26 0.00 3.85
221 222 1.203928 CAAGCCATGACGATCGAGAC 58.796 55.000 24.34 12.85 0.00 3.36
222 223 0.528466 GCAAGCCATGACGATCGAGA 60.528 55.000 24.34 7.76 0.00 4.04
223 224 1.815212 CGCAAGCCATGACGATCGAG 61.815 60.000 24.34 8.30 32.61 4.04
224 225 1.878069 CGCAAGCCATGACGATCGA 60.878 57.895 24.34 0.00 32.61 3.59
225 226 2.082437 GACGCAAGCCATGACGATCG 62.082 60.000 14.88 14.88 45.62 3.69
226 227 1.083806 TGACGCAAGCCATGACGATC 61.084 55.000 0.00 0.00 45.62 3.69
227 228 1.079197 TGACGCAAGCCATGACGAT 60.079 52.632 0.00 0.00 45.62 3.73
228 229 2.027073 GTGACGCAAGCCATGACGA 61.027 57.895 0.00 0.00 45.62 4.20
229 230 2.476051 GTGACGCAAGCCATGACG 59.524 61.111 0.00 0.00 45.62 4.35
230 231 2.476051 CGTGACGCAAGCCATGAC 59.524 61.111 0.00 0.00 39.27 3.06
231 232 2.741985 CCGTGACGCAAGCCATGA 60.742 61.111 0.00 0.00 39.27 3.07
232 233 3.803082 CCCGTGACGCAAGCCATG 61.803 66.667 0.00 0.00 45.62 3.66
233 234 3.842925 AACCCGTGACGCAAGCCAT 62.843 57.895 0.00 0.00 45.62 4.40
234 235 4.555709 AACCCGTGACGCAAGCCA 62.556 61.111 0.00 0.00 45.62 4.75
235 236 3.723348 GAACCCGTGACGCAAGCC 61.723 66.667 0.00 0.00 45.62 4.35
236 237 3.723348 GGAACCCGTGACGCAAGC 61.723 66.667 0.00 0.00 45.62 4.01
238 239 2.029964 GAGGAACCCGTGACGCAA 59.970 61.111 0.00 0.00 0.00 4.85
239 240 4.351938 CGAGGAACCCGTGACGCA 62.352 66.667 0.00 0.00 0.00 5.24
242 243 3.966026 CTCGCGAGGAACCCGTGAC 62.966 68.421 28.40 0.00 42.18 3.67
261 262 2.769095 AGAGAGATCAAGGCAAGGGTAC 59.231 50.000 0.00 0.00 0.00 3.34
262 263 2.768527 CAGAGAGATCAAGGCAAGGGTA 59.231 50.000 0.00 0.00 0.00 3.69
263 264 1.558756 CAGAGAGATCAAGGCAAGGGT 59.441 52.381 0.00 0.00 0.00 4.34
264 265 1.746516 GCAGAGAGATCAAGGCAAGGG 60.747 57.143 0.00 0.00 0.00 3.95
265 266 1.666054 GCAGAGAGATCAAGGCAAGG 58.334 55.000 0.00 0.00 0.00 3.61
266 267 1.209990 AGGCAGAGAGATCAAGGCAAG 59.790 52.381 0.00 0.00 0.00 4.01
267 268 1.209019 GAGGCAGAGAGATCAAGGCAA 59.791 52.381 0.00 0.00 0.00 4.52
268 269 0.829333 GAGGCAGAGAGATCAAGGCA 59.171 55.000 0.00 0.00 0.00 4.75
269 270 0.106521 GGAGGCAGAGAGATCAAGGC 59.893 60.000 0.00 0.00 0.00 4.35
270 271 1.792115 AGGAGGCAGAGAGATCAAGG 58.208 55.000 0.00 0.00 0.00 3.61
271 272 2.297033 GCTAGGAGGCAGAGAGATCAAG 59.703 54.545 0.00 0.00 0.00 3.02
272 273 2.315176 GCTAGGAGGCAGAGAGATCAA 58.685 52.381 0.00 0.00 0.00 2.57
273 274 1.817350 CGCTAGGAGGCAGAGAGATCA 60.817 57.143 0.00 0.00 0.00 2.92
274 275 0.881118 CGCTAGGAGGCAGAGAGATC 59.119 60.000 0.00 0.00 0.00 2.75
275 276 0.476338 TCGCTAGGAGGCAGAGAGAT 59.524 55.000 0.00 0.00 0.00 2.75
276 277 0.179032 CTCGCTAGGAGGCAGAGAGA 60.179 60.000 0.00 0.00 41.02 3.10
277 278 1.795170 GCTCGCTAGGAGGCAGAGAG 61.795 65.000 9.44 0.00 43.36 3.20
278 279 1.826054 GCTCGCTAGGAGGCAGAGA 60.826 63.158 9.44 0.00 43.36 3.10
279 280 2.727544 GCTCGCTAGGAGGCAGAG 59.272 66.667 9.44 0.00 43.36 3.35
284 285 3.922640 GGCAGGCTCGCTAGGAGG 61.923 72.222 9.44 0.00 43.36 4.30
285 286 2.837291 AGGCAGGCTCGCTAGGAG 60.837 66.667 8.45 4.39 46.06 3.69
286 287 2.936160 ATCAGGCAGGCTCGCTAGGA 62.936 60.000 0.00 0.00 0.00 2.94
287 288 2.506061 ATCAGGCAGGCTCGCTAGG 61.506 63.158 0.00 0.00 0.00 3.02
288 289 1.300775 CATCAGGCAGGCTCGCTAG 60.301 63.158 0.00 0.00 0.00 3.42
289 290 1.742324 CTCATCAGGCAGGCTCGCTA 61.742 60.000 0.00 0.00 0.00 4.26
290 291 3.079478 TCATCAGGCAGGCTCGCT 61.079 61.111 0.00 0.00 0.00 4.93
291 292 2.588314 CTCATCAGGCAGGCTCGC 60.588 66.667 0.00 0.00 0.00 5.03
292 293 2.108566 CCTCATCAGGCAGGCTCG 59.891 66.667 0.00 0.00 30.98 5.03
300 301 1.409790 CTCAGAGACAGCCTCATCAGG 59.590 57.143 0.00 0.00 44.40 3.86
301 302 1.409790 CCTCAGAGACAGCCTCATCAG 59.590 57.143 0.00 0.00 44.40 2.90
302 303 1.006400 TCCTCAGAGACAGCCTCATCA 59.994 52.381 0.00 0.00 44.40 3.07
303 304 1.774110 TCCTCAGAGACAGCCTCATC 58.226 55.000 0.00 0.00 44.40 2.92
304 305 2.109774 CTTCCTCAGAGACAGCCTCAT 58.890 52.381 0.00 0.00 44.40 2.90
305 306 1.554836 CTTCCTCAGAGACAGCCTCA 58.445 55.000 0.00 0.00 44.40 3.86
306 307 0.175531 GCTTCCTCAGAGACAGCCTC 59.824 60.000 0.00 0.00 42.28 4.70
307 308 0.252193 AGCTTCCTCAGAGACAGCCT 60.252 55.000 14.35 3.39 0.00 4.58
308 309 0.612744 AAGCTTCCTCAGAGACAGCC 59.387 55.000 14.35 1.62 0.00 4.85
309 310 1.405391 GGAAGCTTCCTCAGAGACAGC 60.405 57.143 33.98 11.28 44.11 4.40
310 311 2.671130 GGAAGCTTCCTCAGAGACAG 57.329 55.000 33.98 0.00 44.11 3.51
321 322 2.626840 GGACAGATGACAGGAAGCTTC 58.373 52.381 18.54 18.54 0.00 3.86
322 323 1.280421 GGGACAGATGACAGGAAGCTT 59.720 52.381 0.00 0.00 0.00 3.74
323 324 0.908198 GGGACAGATGACAGGAAGCT 59.092 55.000 0.00 0.00 0.00 3.74
324 325 0.615331 TGGGACAGATGACAGGAAGC 59.385 55.000 0.00 0.00 0.00 3.86
325 326 1.404717 CGTGGGACAGATGACAGGAAG 60.405 57.143 0.00 0.00 41.80 3.46
326 327 0.608130 CGTGGGACAGATGACAGGAA 59.392 55.000 0.00 0.00 41.80 3.36
327 328 0.251608 TCGTGGGACAGATGACAGGA 60.252 55.000 0.00 0.00 41.80 3.86
328 329 0.174389 CTCGTGGGACAGATGACAGG 59.826 60.000 0.00 0.00 41.80 4.00
329 330 0.174389 CCTCGTGGGACAGATGACAG 59.826 60.000 0.00 0.00 41.80 3.51
330 331 1.888436 GCCTCGTGGGACAGATGACA 61.888 60.000 5.54 0.00 41.80 3.58
331 332 1.153549 GCCTCGTGGGACAGATGAC 60.154 63.158 5.54 0.00 41.80 3.06
332 333 0.904865 AAGCCTCGTGGGACAGATGA 60.905 55.000 5.54 0.00 41.80 2.92
333 334 0.742281 CAAGCCTCGTGGGACAGATG 60.742 60.000 5.54 0.00 41.80 2.90
334 335 1.599047 CAAGCCTCGTGGGACAGAT 59.401 57.895 5.54 0.00 41.80 2.90
335 336 2.583441 CCAAGCCTCGTGGGACAGA 61.583 63.158 5.54 0.00 41.80 3.41
336 337 2.046892 CCAAGCCTCGTGGGACAG 60.047 66.667 5.54 0.00 41.80 3.51
337 338 4.329545 GCCAAGCCTCGTGGGACA 62.330 66.667 5.54 0.00 36.58 4.02
357 358 2.202676 GCTCAAGACCCTCGCGAG 60.203 66.667 29.06 29.06 0.00 5.03
358 359 2.276116 AAGCTCAAGACCCTCGCGA 61.276 57.895 9.26 9.26 0.00 5.87
359 360 2.097038 CAAGCTCAAGACCCTCGCG 61.097 63.158 0.00 0.00 0.00 5.87
360 361 0.739112 CTCAAGCTCAAGACCCTCGC 60.739 60.000 0.00 0.00 0.00 5.03
361 362 0.739112 GCTCAAGCTCAAGACCCTCG 60.739 60.000 0.00 0.00 38.21 4.63
362 363 3.151461 GCTCAAGCTCAAGACCCTC 57.849 57.895 0.00 0.00 38.21 4.30
373 374 1.005340 CCGTCTTCATCAGCTCAAGC 58.995 55.000 0.00 0.00 42.49 4.01
374 375 1.005340 GCCGTCTTCATCAGCTCAAG 58.995 55.000 0.00 0.00 0.00 3.02
375 376 0.391661 GGCCGTCTTCATCAGCTCAA 60.392 55.000 0.00 0.00 0.00 3.02
376 377 1.219124 GGCCGTCTTCATCAGCTCA 59.781 57.895 0.00 0.00 0.00 4.26
377 378 1.086634 GTGGCCGTCTTCATCAGCTC 61.087 60.000 0.00 0.00 0.00 4.09
378 379 1.078848 GTGGCCGTCTTCATCAGCT 60.079 57.895 0.00 0.00 0.00 4.24
379 380 2.456119 CGTGGCCGTCTTCATCAGC 61.456 63.158 0.00 0.00 0.00 4.26
380 381 2.456119 GCGTGGCCGTCTTCATCAG 61.456 63.158 0.00 0.00 36.15 2.90
381 382 2.434185 GCGTGGCCGTCTTCATCA 60.434 61.111 0.00 0.00 36.15 3.07
382 383 2.125512 AGCGTGGCCGTCTTCATC 60.126 61.111 0.00 0.00 36.15 2.92
383 384 2.434884 CAGCGTGGCCGTCTTCAT 60.435 61.111 0.00 0.00 36.15 2.57
384 385 4.680237 CCAGCGTGGCCGTCTTCA 62.680 66.667 0.00 0.00 36.15 3.02
427 428 4.711949 AGACTTGCCTGCCTGCGG 62.712 66.667 0.00 0.00 0.00 5.69
428 429 3.429141 CAGACTTGCCTGCCTGCG 61.429 66.667 0.00 0.00 0.00 5.18
429 430 3.060615 CCAGACTTGCCTGCCTGC 61.061 66.667 0.00 0.00 32.97 4.85
430 431 2.360852 CCCAGACTTGCCTGCCTG 60.361 66.667 0.00 0.00 32.97 4.85
431 432 2.156098 TTCCCAGACTTGCCTGCCT 61.156 57.895 0.00 0.00 32.97 4.75
432 433 1.973812 GTTCCCAGACTTGCCTGCC 60.974 63.158 0.00 0.00 32.97 4.85
433 434 1.973812 GGTTCCCAGACTTGCCTGC 60.974 63.158 0.00 0.00 32.97 4.85
434 435 1.303643 GGGTTCCCAGACTTGCCTG 60.304 63.158 2.59 0.00 0.00 4.85
435 436 2.539081 GGGGTTCCCAGACTTGCCT 61.539 63.158 10.25 0.00 44.65 4.75
436 437 2.035783 GGGGTTCCCAGACTTGCC 59.964 66.667 10.25 0.00 44.65 4.52
446 447 0.892358 GTTCTGGAAACGGGGGTTCC 60.892 60.000 5.49 5.49 44.19 3.62
447 448 1.232621 CGTTCTGGAAACGGGGGTTC 61.233 60.000 2.53 0.00 39.73 3.62
448 449 1.228033 CGTTCTGGAAACGGGGGTT 60.228 57.895 2.53 0.00 39.73 4.11
449 450 2.428622 CGTTCTGGAAACGGGGGT 59.571 61.111 2.53 0.00 39.73 4.95
450 451 3.053896 GCGTTCTGGAAACGGGGG 61.054 66.667 11.71 0.00 43.25 5.40
451 452 3.053896 GGCGTTCTGGAAACGGGG 61.054 66.667 11.71 0.00 43.25 5.73
452 453 3.419759 CGGCGTTCTGGAAACGGG 61.420 66.667 11.71 0.00 43.25 5.28
453 454 2.356553 TCGGCGTTCTGGAAACGG 60.357 61.111 6.85 0.00 43.25 4.44
454 455 1.886861 CTGTCGGCGTTCTGGAAACG 61.887 60.000 6.85 5.98 45.56 3.60
455 456 1.860078 CTGTCGGCGTTCTGGAAAC 59.140 57.895 6.85 0.00 0.00 2.78
456 457 1.959226 GCTGTCGGCGTTCTGGAAA 60.959 57.895 6.85 0.00 0.00 3.13
457 458 2.357034 GCTGTCGGCGTTCTGGAA 60.357 61.111 6.85 0.00 0.00 3.53
458 459 4.373116 GGCTGTCGGCGTTCTGGA 62.373 66.667 6.85 0.00 42.94 3.86
459 460 4.680237 TGGCTGTCGGCGTTCTGG 62.680 66.667 6.85 1.18 42.94 3.86
460 461 3.414700 GTGGCTGTCGGCGTTCTG 61.415 66.667 6.85 7.04 42.94 3.02
461 462 4.681978 GGTGGCTGTCGGCGTTCT 62.682 66.667 6.85 0.00 42.94 3.01
480 481 3.077556 ATCGGTCTTGAGCGGGCT 61.078 61.111 19.65 0.00 0.00 5.19
487 488 3.199727 TCAATCCCAATGATCGGTCTTGA 59.800 43.478 0.00 0.00 31.61 3.02
493 494 1.599071 CACGTCAATCCCAATGATCGG 59.401 52.381 0.00 0.00 31.61 4.18
499 500 1.453155 GCACTCACGTCAATCCCAAT 58.547 50.000 0.00 0.00 0.00 3.16
500 501 0.605319 GGCACTCACGTCAATCCCAA 60.605 55.000 0.00 0.00 0.00 4.12
502 503 1.296715 AGGCACTCACGTCAATCCC 59.703 57.895 0.00 0.00 0.00 3.85
518 519 6.471146 CAAGAGGGAAATATATCAGGTGAGG 58.529 44.000 0.00 0.00 0.00 3.86
538 539 0.317160 CGTGTGAGGTACCTGCAAGA 59.683 55.000 22.10 0.00 34.07 3.02
550 551 0.452184 ATGGCTCGTAGACGTGTGAG 59.548 55.000 0.00 0.00 40.80 3.51
557 558 0.527817 CCCGTGAATGGCTCGTAGAC 60.528 60.000 0.00 0.00 0.00 2.59
567 568 1.666209 GCCATCCAACCCCGTGAATG 61.666 60.000 0.00 0.00 0.00 2.67
576 577 0.329596 ACCTCTGAAGCCATCCAACC 59.670 55.000 0.00 0.00 0.00 3.77
585 586 4.001618 ACTCTTGAGAAACCTCTGAAGC 57.998 45.455 4.49 0.00 41.29 3.86
590 591 3.800604 GCGACAACTCTTGAGAAACCTCT 60.801 47.826 4.49 0.00 33.28 3.69
593 594 2.210116 TGCGACAACTCTTGAGAAACC 58.790 47.619 4.49 0.00 0.00 3.27
600 601 8.526218 AATCTATACATATGCGACAACTCTTG 57.474 34.615 1.58 0.00 0.00 3.02
644 645 4.053295 ACACCACTACACAAACGTGATAC 58.947 43.478 0.00 0.00 37.83 2.24
647 648 2.272678 CACACCACTACACAAACGTGA 58.727 47.619 0.00 0.00 37.83 4.35
650 651 0.941542 CCCACACCACTACACAAACG 59.058 55.000 0.00 0.00 0.00 3.60
653 654 0.464735 GCACCCACACCACTACACAA 60.465 55.000 0.00 0.00 0.00 3.33
657 658 1.959226 CACGCACCCACACCACTAC 60.959 63.158 0.00 0.00 0.00 2.73
678 679 0.796491 GCACAACACACAACACCACG 60.796 55.000 0.00 0.00 0.00 4.94
700 701 4.039730 GCATCGATATAGGCCATAGACCAT 59.960 45.833 5.01 0.00 0.00 3.55
738 739 7.648142 TGTTAAGTTGAAAGATCATTGGTGAC 58.352 34.615 0.00 0.00 37.14 3.67
750 751 8.209917 ACTTAGACCTGTTGTTAAGTTGAAAG 57.790 34.615 0.00 0.00 33.76 2.62
759 760 5.811796 TGGCTAACTTAGACCTGTTGTTA 57.188 39.130 0.00 0.00 30.79 2.41
762 763 6.575162 AAAATGGCTAACTTAGACCTGTTG 57.425 37.500 0.00 0.00 30.79 3.33
839 841 1.794222 CGTGGGAAAGATCGTTGGC 59.206 57.895 0.00 0.00 0.00 4.52
840 842 0.953471 TGCGTGGGAAAGATCGTTGG 60.953 55.000 0.00 0.00 0.00 3.77
844 846 2.919666 ATTTTGCGTGGGAAAGATCG 57.080 45.000 0.00 0.00 0.00 3.69
845 847 7.595311 AATTTTATTTTGCGTGGGAAAGATC 57.405 32.000 0.00 0.00 0.00 2.75
846 848 7.977789 AAATTTTATTTTGCGTGGGAAAGAT 57.022 28.000 0.00 0.00 0.00 2.40
847 849 8.888579 TTAAATTTTATTTTGCGTGGGAAAGA 57.111 26.923 0.00 0.00 0.00 2.52
848 850 9.937175 TTTTAAATTTTATTTTGCGTGGGAAAG 57.063 25.926 0.00 0.00 0.00 2.62
904 1238 7.124298 CGGAGGATGGAGAATGGAGTATTATTA 59.876 40.741 0.00 0.00 0.00 0.98
905 1239 6.070538 CGGAGGATGGAGAATGGAGTATTATT 60.071 42.308 0.00 0.00 0.00 1.40
907 1241 4.772624 CGGAGGATGGAGAATGGAGTATTA 59.227 45.833 0.00 0.00 0.00 0.98
909 1243 3.169099 CGGAGGATGGAGAATGGAGTAT 58.831 50.000 0.00 0.00 0.00 2.12
910 1244 2.091278 ACGGAGGATGGAGAATGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
911 1245 1.343478 ACGGAGGATGGAGAATGGAGT 60.343 52.381 0.00 0.00 0.00 3.85
922 1256 0.673985 TATGAGGCGAACGGAGGATG 59.326 55.000 0.00 0.00 0.00 3.51
925 1259 2.557056 TCTTATATGAGGCGAACGGAGG 59.443 50.000 0.00 0.00 0.00 4.30
926 1260 3.917329 TCTTATATGAGGCGAACGGAG 57.083 47.619 0.00 0.00 0.00 4.63
927 1261 4.866508 AATCTTATATGAGGCGAACGGA 57.133 40.909 0.00 0.00 0.00 4.69
928 1262 6.565234 AGATAATCTTATATGAGGCGAACGG 58.435 40.000 0.00 0.00 0.00 4.44
929 1263 6.693545 GGAGATAATCTTATATGAGGCGAACG 59.306 42.308 0.00 0.00 0.00 3.95
930 1264 7.704472 CAGGAGATAATCTTATATGAGGCGAAC 59.296 40.741 0.00 0.00 0.00 3.95
956 1290 2.096013 GGAATGGCGCTCTTGTTTAGTC 59.904 50.000 7.64 0.00 0.00 2.59
958 1292 2.083774 TGGAATGGCGCTCTTGTTTAG 58.916 47.619 7.64 0.00 0.00 1.85
1004 1339 2.435586 ATGGTGACTGCTGCGAGC 60.436 61.111 0.00 1.70 42.82 5.03
1056 1391 1.078918 GGTTACGGTAGTGGTGGGC 60.079 63.158 0.00 0.00 0.00 5.36
1058 1393 1.446618 GCGGTTACGGTAGTGGTGG 60.447 63.158 0.00 0.00 41.36 4.61
1059 1394 4.173971 GCGGTTACGGTAGTGGTG 57.826 61.111 0.00 0.00 41.36 4.17
1200 1535 2.683933 TGGACCTCCCGGAAGCTC 60.684 66.667 0.73 0.00 37.93 4.09
1214 1549 2.203938 GGAGAGGTGGTGGGTGGA 60.204 66.667 0.00 0.00 0.00 4.02
1581 1922 2.657237 GTGTAGACCAGGCGCAGT 59.343 61.111 10.83 2.48 0.00 4.40
1751 2094 5.047802 AGGATGTAGGCTTGATTTTTGTGTG 60.048 40.000 0.00 0.00 0.00 3.82
1975 2318 1.472878 CTCGACAATCGTCTCCAAGGA 59.527 52.381 0.00 0.00 41.35 3.36
2017 2366 5.291614 CCAAAACCTTCAGTTCACAATGTTG 59.708 40.000 0.00 0.00 37.88 3.33
2094 2443 5.711976 AGACAGGAACCAACAAGGATAAATG 59.288 40.000 0.00 0.00 41.22 2.32
2178 2527 2.108075 CCATGCCATGATGTAGGGGTAA 59.892 50.000 6.18 0.00 0.00 2.85
2236 2585 2.031258 TGTTGTCAAGCACCTTCGAA 57.969 45.000 0.00 0.00 0.00 3.71
2254 2609 3.055167 TGTCAGGATACCTTGTCCACATG 60.055 47.826 0.00 0.00 38.25 3.21
2330 2689 3.392947 TGATGGGTTCACCTTGTTGTCTA 59.607 43.478 0.00 0.00 41.11 2.59
2332 2691 2.582052 TGATGGGTTCACCTTGTTGTC 58.418 47.619 0.00 0.00 41.11 3.18
2333 2692 2.746279 TGATGGGTTCACCTTGTTGT 57.254 45.000 0.00 0.00 41.11 3.32
2342 2701 4.932799 CGTATGTGTAAAGTGATGGGTTCA 59.067 41.667 0.00 0.00 0.00 3.18
2344 2703 3.687698 GCGTATGTGTAAAGTGATGGGTT 59.312 43.478 0.00 0.00 0.00 4.11
2345 2704 3.267483 GCGTATGTGTAAAGTGATGGGT 58.733 45.455 0.00 0.00 0.00 4.51
2349 2895 5.182487 TGAATGGCGTATGTGTAAAGTGAT 58.818 37.500 0.00 0.00 0.00 3.06
2357 2903 1.086696 GTGCTGAATGGCGTATGTGT 58.913 50.000 0.00 0.00 34.52 3.72
2361 2907 2.009774 GACTTGTGCTGAATGGCGTAT 58.990 47.619 0.00 0.00 34.52 3.06
2362 2908 1.001974 AGACTTGTGCTGAATGGCGTA 59.998 47.619 0.00 0.00 34.52 4.42
2363 2909 0.250467 AGACTTGTGCTGAATGGCGT 60.250 50.000 0.00 0.00 34.52 5.68
2364 2910 1.725641 TAGACTTGTGCTGAATGGCG 58.274 50.000 0.00 0.00 34.52 5.69
2544 3099 2.457366 AGTGGAACCTCTTACAAGCG 57.543 50.000 0.00 0.00 37.80 4.68
2580 3135 5.036117 ACACAACAACAGAGTGATTAGGT 57.964 39.130 0.00 0.00 37.05 3.08
2942 3502 7.065324 CGGTCTTATATTTGTTTACAGAGGCAA 59.935 37.037 0.00 0.00 0.00 4.52
2944 3504 6.759827 TCGGTCTTATATTTGTTTACAGAGGC 59.240 38.462 0.00 0.00 0.00 4.70
2980 3540 8.943002 CCTCTGTAAACAAATATAAGACCGTTT 58.057 33.333 0.00 0.00 0.00 3.60
2982 3542 7.046033 CCCTCTGTAAACAAATATAAGACCGT 58.954 38.462 0.00 0.00 0.00 4.83
2984 3544 8.265764 ACTCCCTCTGTAAACAAATATAAGACC 58.734 37.037 0.00 0.00 0.00 3.85
2993 3553 9.667107 CTAAATGATACTCCCTCTGTAAACAAA 57.333 33.333 0.00 0.00 0.00 2.83
2995 3555 8.375493 ACTAAATGATACTCCCTCTGTAAACA 57.625 34.615 0.00 0.00 0.00 2.83
2996 3556 9.968870 CTACTAAATGATACTCCCTCTGTAAAC 57.031 37.037 0.00 0.00 0.00 2.01
2997 3557 9.144298 CCTACTAAATGATACTCCCTCTGTAAA 57.856 37.037 0.00 0.00 0.00 2.01
2999 3559 6.720288 GCCTACTAAATGATACTCCCTCTGTA 59.280 42.308 0.00 0.00 0.00 2.74
3007 3591 4.284746 AGGCCAGCCTACTAAATGATACTC 59.715 45.833 10.11 0.00 46.14 2.59
3034 3622 2.498167 CTTGTTCTCTGGGTCCACAAG 58.502 52.381 3.80 3.80 38.69 3.16
3039 3627 3.108376 AGATACCTTGTTCTCTGGGTCC 58.892 50.000 0.00 0.00 33.74 4.46
3046 3634 5.695424 AACCCCTAAGATACCTTGTTCTC 57.305 43.478 0.00 0.00 33.94 2.87
3114 3713 5.805994 GGTGATCCTCAGTCTTAAGTTTACG 59.194 44.000 1.63 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.