Multiple sequence alignment - TraesCS6A01G138400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G138400 chr6A 100.000 3422 0 0 1 3422 109485326 109488747 0.000000e+00 6320.0
1 TraesCS6A01G138400 chr6A 79.431 598 100 8 216 809 604493386 604492808 5.320000e-108 401.0
2 TraesCS6A01G138400 chr6A 92.958 213 15 0 4 216 177675716 177675504 9.220000e-81 311.0
3 TraesCS6A01G138400 chr6A 92.130 216 16 1 1 216 223419385 223419599 1.540000e-78 303.0
4 TraesCS6A01G138400 chr6A 95.082 183 5 3 3192 3373 24072060 24071881 5.590000e-73 285.0
5 TraesCS6A01G138400 chr6A 100.000 36 0 0 2753 2788 109487980 109488015 2.200000e-07 67.6
6 TraesCS6A01G138400 chr6A 100.000 36 0 0 2655 2690 109488078 109488113 2.200000e-07 67.6
7 TraesCS6A01G138400 chr6A 88.636 44 4 1 2767 2809 109487953 109487996 6.000000e-03 52.8
8 TraesCS6A01G138400 chr6A 88.636 44 4 1 2628 2671 109488092 109488134 6.000000e-03 52.8
9 TraesCS6A01G138400 chr6D 96.395 1609 58 0 923 2531 91070871 91072479 0.000000e+00 2651.0
10 TraesCS6A01G138400 chr6D 96.748 492 11 4 2691 3181 91072683 91073170 0.000000e+00 815.0
11 TraesCS6A01G138400 chr6D 86.878 724 57 10 207 923 91070002 91070694 0.000000e+00 776.0
12 TraesCS6A01G138400 chr6D 94.845 97 2 2 2529 2622 91072579 91072675 7.650000e-32 148.0
13 TraesCS6A01G138400 chr6D 100.000 36 0 0 2655 2690 91072744 91072779 2.200000e-07 67.6
14 TraesCS6A01G138400 chr6D 88.636 44 4 1 2628 2671 91072758 91072800 6.000000e-03 52.8
15 TraesCS6A01G138400 chr6B 92.393 1801 105 21 846 2622 174947689 174949481 0.000000e+00 2538.0
16 TraesCS6A01G138400 chr6B 88.395 517 32 12 2692 3183 174949490 174950003 6.320000e-167 597.0
17 TraesCS6A01G138400 chr6B 100.000 35 0 0 2655 2689 174949550 174949584 7.930000e-07 65.8
18 TraesCS6A01G138400 chr1A 87.500 448 51 4 206 651 549624629 549624185 2.360000e-141 512.0
19 TraesCS6A01G138400 chr5D 80.833 600 95 6 212 809 479911631 479912212 1.450000e-123 453.0
20 TraesCS6A01G138400 chr5D 98.204 167 2 1 3192 3357 368995359 368995525 1.200000e-74 291.0
21 TraesCS6A01G138400 chr7D 78.650 637 95 21 215 842 54263081 54262477 5.360000e-103 385.0
22 TraesCS6A01G138400 chr7D 95.506 178 5 3 3191 3367 517575234 517575409 7.230000e-72 281.0
23 TraesCS6A01G138400 chr7D 100.000 29 0 0 2529 2557 217945509 217945481 2.000000e-03 54.7
24 TraesCS6A01G138400 chr3A 81.798 456 73 9 212 663 621206859 621207308 1.160000e-99 374.0
25 TraesCS6A01G138400 chr2A 77.179 631 109 13 216 839 527621430 527620828 5.470000e-88 335.0
26 TraesCS6A01G138400 chr7A 93.365 211 14 0 1 211 712761646 712761856 2.560000e-81 313.0
27 TraesCS6A01G138400 chr7A 92.523 214 14 2 4 216 213791133 213790921 4.290000e-79 305.0
28 TraesCS6A01G138400 chr5A 94.118 204 12 0 4 207 611382629 611382426 9.220000e-81 311.0
29 TraesCS6A01G138400 chr5A 98.204 167 2 1 3192 3357 651496822 651496988 1.200000e-74 291.0
30 TraesCS6A01G138400 chr4D 93.720 207 12 1 1 207 453233488 453233693 3.320000e-80 309.0
31 TraesCS6A01G138400 chr4A 92.488 213 16 0 4 216 685710154 685709942 4.290000e-79 305.0
32 TraesCS6A01G138400 chr4A 91.071 224 17 3 4 226 468233697 468233476 2.000000e-77 300.0
33 TraesCS6A01G138400 chr3D 92.130 216 16 1 1 216 417517022 417517236 1.540000e-78 303.0
34 TraesCS6A01G138400 chr2D 98.204 167 2 1 3192 3357 516708476 516708310 1.200000e-74 291.0
35 TraesCS6A01G138400 chr2D 96.552 174 5 1 3184 3356 446317635 446317808 1.550000e-73 287.0
36 TraesCS6A01G138400 chr5B 97.633 169 3 1 3189 3356 93472268 93472100 4.320000e-74 289.0
37 TraesCS6A01G138400 chr7B 92.746 193 8 6 3191 3380 672170126 672169937 1.210000e-69 274.0
38 TraesCS6A01G138400 chr7B 100.000 29 0 0 2529 2557 182133757 182133785 2.000000e-03 54.7
39 TraesCS6A01G138400 chr4B 91.089 202 13 5 3185 3385 453769332 453769135 5.630000e-68 268.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G138400 chr6A 109485326 109488747 3421 False 1312.160000 6320 95.4544 1 3422 5 chr6A.!!$F2 3421
1 TraesCS6A01G138400 chr6A 604492808 604493386 578 True 401.000000 401 79.4310 216 809 1 chr6A.!!$R3 593
2 TraesCS6A01G138400 chr6D 91070002 91073170 3168 False 751.733333 2651 93.9170 207 3181 6 chr6D.!!$F1 2974
3 TraesCS6A01G138400 chr6B 174947689 174950003 2314 False 1066.933333 2538 93.5960 846 3183 3 chr6B.!!$F1 2337
4 TraesCS6A01G138400 chr5D 479911631 479912212 581 False 453.000000 453 80.8330 212 809 1 chr5D.!!$F2 597
5 TraesCS6A01G138400 chr7D 54262477 54263081 604 True 385.000000 385 78.6500 215 842 1 chr7D.!!$R1 627
6 TraesCS6A01G138400 chr2A 527620828 527621430 602 True 335.000000 335 77.1790 216 839 1 chr2A.!!$R1 623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 0.036765 TTGTCATAACGCCTCCGCTT 60.037 50.0 0.0 0.0 38.22 4.68 F
97 98 0.248743 TCATAACGCCTCCGCTTACG 60.249 55.0 0.0 0.0 38.22 3.18 F
482 484 0.250901 AAGAAGACGCCAAGCACCAT 60.251 50.0 0.0 0.0 0.00 3.55 F
887 895 0.321996 GTTGAAGGAGAAGGGCGAGT 59.678 55.0 0.0 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1633 1821 0.035343 GGCCTTGTAACCTCCTCACC 60.035 60.0 0.00 0.0 0.00 4.02 R
1693 1881 0.413832 TACTCCAGGGAGCCAAGACT 59.586 55.0 15.18 0.0 45.54 3.24 R
1768 1956 2.014335 TCCATCAGTGCATTCGTCAG 57.986 50.0 0.00 0.0 0.00 3.51 R
2547 2837 0.546122 GTGGCATGTACTCCATCCCA 59.454 55.0 0.00 0.0 39.17 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.180496 GGAGGTGCCGTACTTTCG 57.820 61.111 0.00 0.00 0.00 3.46
37 38 4.480386 CCGTACTTTCGGTACTAGGATC 57.520 50.000 0.00 0.00 46.19 3.36
38 39 3.059325 CCGTACTTTCGGTACTAGGATCG 60.059 52.174 0.00 0.00 46.19 3.69
39 40 3.059325 CGTACTTTCGGTACTAGGATCGG 60.059 52.174 8.01 0.00 46.19 4.18
40 41 3.010200 ACTTTCGGTACTAGGATCGGT 57.990 47.619 8.01 0.00 0.00 4.69
41 42 2.948315 ACTTTCGGTACTAGGATCGGTC 59.052 50.000 8.01 0.00 0.00 4.79
42 43 1.586422 TTCGGTACTAGGATCGGTCG 58.414 55.000 8.01 0.00 0.00 4.79
43 44 0.250038 TCGGTACTAGGATCGGTCGG 60.250 60.000 8.01 0.00 0.00 4.79
44 45 0.250038 CGGTACTAGGATCGGTCGGA 60.250 60.000 0.00 0.00 0.00 4.55
45 46 1.610102 CGGTACTAGGATCGGTCGGAT 60.610 57.143 0.00 0.00 38.35 4.18
52 53 3.165559 GATCGGTCGGATCGTGAAG 57.834 57.895 10.85 0.00 42.02 3.02
53 54 0.661552 GATCGGTCGGATCGTGAAGA 59.338 55.000 10.85 0.00 42.02 2.87
54 55 0.381089 ATCGGTCGGATCGTGAAGAC 59.619 55.000 10.85 0.00 0.00 3.01
56 57 1.872679 GGTCGGATCGTGAAGACGC 60.873 63.158 0.00 0.00 45.68 5.19
57 58 1.154093 GTCGGATCGTGAAGACGCA 60.154 57.895 0.00 0.00 45.68 5.24
58 59 1.154093 TCGGATCGTGAAGACGCAC 60.154 57.895 0.00 0.00 45.68 5.34
65 66 3.467043 GTGAAGACGCACGACTACA 57.533 52.632 0.00 0.00 0.00 2.74
66 67 1.978542 GTGAAGACGCACGACTACAT 58.021 50.000 0.00 0.00 0.00 2.29
67 68 1.912110 GTGAAGACGCACGACTACATC 59.088 52.381 0.00 0.00 0.00 3.06
68 69 1.538075 TGAAGACGCACGACTACATCA 59.462 47.619 0.00 0.00 0.00 3.07
69 70 2.030628 TGAAGACGCACGACTACATCAA 60.031 45.455 0.00 0.00 0.00 2.57
70 71 2.941453 AGACGCACGACTACATCAAT 57.059 45.000 0.00 0.00 0.00 2.57
71 72 2.798680 AGACGCACGACTACATCAATC 58.201 47.619 0.00 0.00 0.00 2.67
72 73 1.513178 GACGCACGACTACATCAATCG 59.487 52.381 0.00 0.00 41.60 3.34
78 79 3.909430 ACGACTACATCAATCGTGTTGT 58.091 40.909 0.00 0.00 46.68 3.32
79 80 3.918591 ACGACTACATCAATCGTGTTGTC 59.081 43.478 9.65 9.65 46.68 3.18
80 81 3.917985 CGACTACATCAATCGTGTTGTCA 59.082 43.478 16.58 0.00 45.89 3.58
81 82 4.562789 CGACTACATCAATCGTGTTGTCAT 59.437 41.667 16.58 0.00 45.89 3.06
82 83 5.741982 CGACTACATCAATCGTGTTGTCATA 59.258 40.000 16.58 2.86 45.89 2.15
83 84 6.252655 CGACTACATCAATCGTGTTGTCATAA 59.747 38.462 16.58 0.00 45.89 1.90
84 85 7.290857 ACTACATCAATCGTGTTGTCATAAC 57.709 36.000 3.88 0.00 38.39 1.89
85 86 5.203358 ACATCAATCGTGTTGTCATAACG 57.797 39.130 2.26 2.26 33.28 3.18
86 87 3.715618 TCAATCGTGTTGTCATAACGC 57.284 42.857 3.56 0.00 37.24 4.84
87 88 2.413796 TCAATCGTGTTGTCATAACGCC 59.586 45.455 3.56 0.00 37.24 5.68
88 89 2.380084 ATCGTGTTGTCATAACGCCT 57.620 45.000 3.56 0.00 37.24 5.52
89 90 1.705256 TCGTGTTGTCATAACGCCTC 58.295 50.000 3.56 0.00 37.24 4.70
90 91 0.719465 CGTGTTGTCATAACGCCTCC 59.281 55.000 0.00 0.00 0.00 4.30
91 92 0.719465 GTGTTGTCATAACGCCTCCG 59.281 55.000 0.00 0.00 41.14 4.63
92 93 1.017177 TGTTGTCATAACGCCTCCGC 61.017 55.000 0.00 0.00 38.22 5.54
93 94 0.739813 GTTGTCATAACGCCTCCGCT 60.740 55.000 0.00 0.00 38.22 5.52
94 95 0.036765 TTGTCATAACGCCTCCGCTT 60.037 50.000 0.00 0.00 38.22 4.68
95 96 0.818938 TGTCATAACGCCTCCGCTTA 59.181 50.000 0.00 0.00 38.22 3.09
96 97 1.206523 GTCATAACGCCTCCGCTTAC 58.793 55.000 0.00 0.00 38.22 2.34
97 98 0.248743 TCATAACGCCTCCGCTTACG 60.249 55.000 0.00 0.00 38.22 3.18
115 116 2.101700 GGTCTACGAGGGTACGTGG 58.898 63.158 0.00 0.00 46.02 4.94
117 118 3.159298 TCTACGAGGGTACGTGGAC 57.841 57.895 0.00 0.00 45.53 4.02
118 119 0.324614 TCTACGAGGGTACGTGGACA 59.675 55.000 0.00 0.00 45.53 4.02
119 120 1.167851 CTACGAGGGTACGTGGACAA 58.832 55.000 0.00 0.00 44.98 3.18
120 121 0.881118 TACGAGGGTACGTGGACAAC 59.119 55.000 0.00 0.00 46.02 3.32
121 122 1.108727 ACGAGGGTACGTGGACAACA 61.109 55.000 0.00 0.00 44.84 3.33
122 123 0.665369 CGAGGGTACGTGGACAACAC 60.665 60.000 0.00 0.00 46.78 3.32
132 133 3.710326 GTGGACAACACTTTTCCCTTC 57.290 47.619 0.00 0.00 46.72 3.46
133 134 3.288092 GTGGACAACACTTTTCCCTTCT 58.712 45.455 0.00 0.00 46.72 2.85
134 135 3.315470 GTGGACAACACTTTTCCCTTCTC 59.685 47.826 0.00 0.00 46.72 2.87
135 136 2.548480 GGACAACACTTTTCCCTTCTCG 59.452 50.000 0.00 0.00 0.00 4.04
136 137 3.203716 GACAACACTTTTCCCTTCTCGT 58.796 45.455 0.00 0.00 0.00 4.18
137 138 3.617284 ACAACACTTTTCCCTTCTCGTT 58.383 40.909 0.00 0.00 0.00 3.85
138 139 3.377172 ACAACACTTTTCCCTTCTCGTTG 59.623 43.478 0.00 0.00 38.68 4.10
139 140 1.947456 ACACTTTTCCCTTCTCGTTGC 59.053 47.619 0.00 0.00 0.00 4.17
140 141 2.222027 CACTTTTCCCTTCTCGTTGCT 58.778 47.619 0.00 0.00 0.00 3.91
141 142 3.181458 ACACTTTTCCCTTCTCGTTGCTA 60.181 43.478 0.00 0.00 0.00 3.49
142 143 4.003648 CACTTTTCCCTTCTCGTTGCTAT 58.996 43.478 0.00 0.00 0.00 2.97
143 144 4.003648 ACTTTTCCCTTCTCGTTGCTATG 58.996 43.478 0.00 0.00 0.00 2.23
144 145 2.024176 TTCCCTTCTCGTTGCTATGC 57.976 50.000 0.00 0.00 0.00 3.14
145 146 0.901827 TCCCTTCTCGTTGCTATGCA 59.098 50.000 0.00 0.00 36.47 3.96
146 147 1.486310 TCCCTTCTCGTTGCTATGCAT 59.514 47.619 3.79 3.79 38.76 3.96
147 148 1.869767 CCCTTCTCGTTGCTATGCATC 59.130 52.381 0.19 0.00 38.76 3.91
148 149 2.554142 CCTTCTCGTTGCTATGCATCA 58.446 47.619 0.19 0.00 38.76 3.07
149 150 2.286294 CCTTCTCGTTGCTATGCATCAC 59.714 50.000 0.19 0.00 38.76 3.06
150 151 1.939974 TCTCGTTGCTATGCATCACC 58.060 50.000 0.19 0.00 38.76 4.02
151 152 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
152 153 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
153 154 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
154 155 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
155 156 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
156 157 3.747529 CGTTGCTATGCATCACCATGATA 59.252 43.478 0.19 0.00 38.76 2.15
157 158 4.142966 CGTTGCTATGCATCACCATGATAG 60.143 45.833 0.19 0.00 38.76 2.08
158 159 4.895668 TGCTATGCATCACCATGATAGA 57.104 40.909 0.19 0.00 34.28 1.98
159 160 5.431179 TGCTATGCATCACCATGATAGAT 57.569 39.130 0.19 0.00 34.28 1.98
160 161 5.425630 TGCTATGCATCACCATGATAGATC 58.574 41.667 0.19 0.00 34.28 2.75
161 162 5.189145 TGCTATGCATCACCATGATAGATCT 59.811 40.000 0.19 0.00 34.28 2.75
162 163 6.114089 GCTATGCATCACCATGATAGATCTT 58.886 40.000 0.19 0.00 34.28 2.40
163 164 6.037281 GCTATGCATCACCATGATAGATCTTG 59.963 42.308 0.19 0.00 34.28 3.02
164 165 4.070009 TGCATCACCATGATAGATCTTGC 58.930 43.478 0.00 0.69 34.28 4.01
165 166 3.124806 GCATCACCATGATAGATCTTGCG 59.875 47.826 0.00 0.00 34.28 4.85
166 167 4.563061 CATCACCATGATAGATCTTGCGA 58.437 43.478 0.00 0.00 34.28 5.10
167 168 4.248691 TCACCATGATAGATCTTGCGAG 57.751 45.455 0.00 0.00 32.42 5.03
168 169 3.638627 TCACCATGATAGATCTTGCGAGT 59.361 43.478 0.00 0.00 32.42 4.18
169 170 4.827284 TCACCATGATAGATCTTGCGAGTA 59.173 41.667 0.00 0.00 32.42 2.59
170 171 4.920340 CACCATGATAGATCTTGCGAGTAC 59.080 45.833 0.00 0.00 32.42 2.73
171 172 4.584743 ACCATGATAGATCTTGCGAGTACA 59.415 41.667 0.00 0.00 32.42 2.90
172 173 5.244851 ACCATGATAGATCTTGCGAGTACAT 59.755 40.000 0.00 0.00 32.42 2.29
173 174 6.434340 ACCATGATAGATCTTGCGAGTACATA 59.566 38.462 0.00 0.00 32.42 2.29
174 175 6.971756 CCATGATAGATCTTGCGAGTACATAG 59.028 42.308 0.00 0.00 32.42 2.23
175 176 6.502136 TGATAGATCTTGCGAGTACATAGG 57.498 41.667 0.00 0.00 0.00 2.57
176 177 6.238648 TGATAGATCTTGCGAGTACATAGGA 58.761 40.000 0.00 0.00 0.00 2.94
177 178 6.715264 TGATAGATCTTGCGAGTACATAGGAA 59.285 38.462 0.00 0.00 0.00 3.36
178 179 7.394641 TGATAGATCTTGCGAGTACATAGGAAT 59.605 37.037 0.00 0.00 0.00 3.01
179 180 6.412362 AGATCTTGCGAGTACATAGGAATT 57.588 37.500 0.00 0.00 0.00 2.17
180 181 6.821388 AGATCTTGCGAGTACATAGGAATTT 58.179 36.000 0.00 0.00 0.00 1.82
181 182 7.275920 AGATCTTGCGAGTACATAGGAATTTT 58.724 34.615 0.00 0.00 0.00 1.82
182 183 7.770897 AGATCTTGCGAGTACATAGGAATTTTT 59.229 33.333 0.00 0.00 0.00 1.94
205 206 7.671495 TTTTGAAATTACTACGTTCCCCTAC 57.329 36.000 0.00 0.00 0.00 3.18
226 227 3.234353 CAGTAGCCTCCACATCCAGATA 58.766 50.000 0.00 0.00 0.00 1.98
232 233 3.009916 GCCTCCACATCCAGATATGGAAT 59.990 47.826 14.17 1.57 43.19 3.01
235 236 6.579849 GCCTCCACATCCAGATATGGAATAAT 60.580 42.308 14.17 0.00 43.19 1.28
237 238 7.892241 CCTCCACATCCAGATATGGAATAATTT 59.108 37.037 14.17 0.00 43.19 1.82
284 285 1.403249 CCGATTAAACAGTCCGTCGGT 60.403 52.381 11.88 0.00 42.54 4.69
394 395 2.183046 GAGAAGAAGAGCGCCGCT 59.817 61.111 13.40 13.40 43.88 5.52
430 431 1.134401 CACACCACACTCCAAGACACT 60.134 52.381 0.00 0.00 0.00 3.55
432 433 1.414181 CACCACACTCCAAGACACTCT 59.586 52.381 0.00 0.00 0.00 3.24
482 484 0.250901 AAGAAGACGCCAAGCACCAT 60.251 50.000 0.00 0.00 0.00 3.55
514 517 6.210287 ACCTAACATCGTCAAAACCAAAAA 57.790 33.333 0.00 0.00 0.00 1.94
515 518 6.811954 ACCTAACATCGTCAAAACCAAAAAT 58.188 32.000 0.00 0.00 0.00 1.82
517 520 6.364976 CCTAACATCGTCAAAACCAAAAATCC 59.635 38.462 0.00 0.00 0.00 3.01
519 522 4.036971 ACATCGTCAAAACCAAAAATCCGA 59.963 37.500 0.00 0.00 0.00 4.55
520 523 3.954999 TCGTCAAAACCAAAAATCCGAC 58.045 40.909 0.00 0.00 0.00 4.79
523 527 3.972502 GTCAAAACCAAAAATCCGACGAG 59.027 43.478 0.00 0.00 0.00 4.18
527 531 2.841215 ACCAAAAATCCGACGAGACAA 58.159 42.857 0.00 0.00 0.00 3.18
559 563 3.257561 CGGGCGTTGCTGATCGAG 61.258 66.667 0.00 0.00 0.00 4.04
576 580 3.338250 GGCATCACCAGGGTGGGA 61.338 66.667 17.88 0.39 43.37 4.37
594 598 3.452627 TGGGAAAGAAGTAGAGCCATCTC 59.547 47.826 0.00 0.00 36.96 2.75
609 613 1.115930 ATCTCTATTCCGGCGTGGCT 61.116 55.000 6.01 0.00 37.80 4.75
651 656 4.684484 ACACCTCCGAGAAAAACTAAGT 57.316 40.909 0.00 0.00 0.00 2.24
812 818 1.737735 CACGATCGCCTGTGCAGAA 60.738 57.895 16.60 0.00 37.32 3.02
843 851 3.288092 AGAGAAAAGTTGGAACCGCTTT 58.712 40.909 7.16 7.16 34.35 3.51
844 852 3.066760 AGAGAAAAGTTGGAACCGCTTTG 59.933 43.478 11.63 0.00 33.36 2.77
854 862 2.418976 GGAACCGCTTTGTGATAACCTC 59.581 50.000 0.00 0.00 0.00 3.85
863 871 5.471556 TTTGTGATAACCTCGGTGAGTTA 57.528 39.130 0.00 0.00 0.00 2.24
887 895 0.321996 GTTGAAGGAGAAGGGCGAGT 59.678 55.000 0.00 0.00 0.00 4.18
888 896 1.549170 GTTGAAGGAGAAGGGCGAGTA 59.451 52.381 0.00 0.00 0.00 2.59
911 923 0.761802 GGAGGAAGGTGGGATAGCAG 59.238 60.000 0.00 0.00 0.00 4.24
914 926 1.061033 AGGAAGGTGGGATAGCAGGAT 60.061 52.381 0.00 0.00 0.00 3.24
959 1147 2.548480 GCATATACGCTTTCCCCTCAAC 59.452 50.000 0.00 0.00 0.00 3.18
961 1149 2.109425 ATACGCTTTCCCCTCAACAC 57.891 50.000 0.00 0.00 0.00 3.32
969 1157 4.634199 CTTTCCCCTCAACACTACGTAAA 58.366 43.478 0.00 0.00 0.00 2.01
991 1179 3.917072 GGATATGCCTTCCGGACTC 57.083 57.895 1.83 0.00 0.00 3.36
1095 1283 3.157949 CTCCCGCTCCTCCTTCCC 61.158 72.222 0.00 0.00 0.00 3.97
1101 1289 3.083997 CTCCTCCTTCCCCCGGTG 61.084 72.222 0.00 0.00 0.00 4.94
1248 1436 1.614824 CTCCCACCTTCCAGCCTCT 60.615 63.158 0.00 0.00 0.00 3.69
1397 1585 1.003355 CCTGTTCCGGCAGTGACAT 60.003 57.895 0.00 0.00 34.84 3.06
1398 1586 1.300971 CCTGTTCCGGCAGTGACATG 61.301 60.000 0.00 0.00 34.84 3.21
1399 1587 1.300971 CTGTTCCGGCAGTGACATGG 61.301 60.000 0.00 0.00 0.00 3.66
1453 1641 1.071699 GTCTTGGTTACAGCTCCCACA 59.928 52.381 0.00 0.00 0.00 4.17
1498 1686 1.144913 ACATGTACTTTGGGTGTGGCT 59.855 47.619 0.00 0.00 0.00 4.75
1507 1695 2.133641 GGGTGTGGCTTGGCTGTTT 61.134 57.895 0.00 0.00 0.00 2.83
1546 1734 0.749091 TGAAATGCAGGCGAGGGATG 60.749 55.000 0.00 0.00 0.00 3.51
1623 1811 2.235898 AGCTGCTGAGGTCTTTAAGGAG 59.764 50.000 0.00 0.00 0.00 3.69
1632 1820 3.709141 AGGTCTTTAAGGAGATGAGAGGC 59.291 47.826 0.00 0.00 0.00 4.70
1633 1821 3.491792 GGTCTTTAAGGAGATGAGAGGCG 60.492 52.174 0.00 0.00 0.00 5.52
1645 1833 0.683504 GAGAGGCGGTGAGGAGGTTA 60.684 60.000 0.00 0.00 0.00 2.85
1656 1844 3.200165 GTGAGGAGGTTACAAGGCCTAAT 59.800 47.826 5.16 0.00 34.81 1.73
1659 1847 4.368067 AGGAGGTTACAAGGCCTAATGTA 58.632 43.478 5.16 9.82 34.81 2.29
1686 1874 2.551270 GTGTCGGTTGCTTCTGCG 59.449 61.111 0.00 0.00 43.34 5.18
1687 1875 2.108157 TGTCGGTTGCTTCTGCGT 59.892 55.556 0.00 0.00 43.34 5.24
1688 1876 0.942410 GTGTCGGTTGCTTCTGCGTA 60.942 55.000 0.00 0.00 43.34 4.42
1692 1880 1.429423 GGTTGCTTCTGCGTATGCC 59.571 57.895 4.05 0.00 43.34 4.40
1693 1881 1.305219 GGTTGCTTCTGCGTATGCCA 61.305 55.000 4.05 0.00 43.34 4.92
1768 1956 1.531883 GGTTGCGAGGCGATTTGATTC 60.532 52.381 0.00 0.00 0.00 2.52
1908 2096 1.820519 GCTTCTCATGGACATGGCAAA 59.179 47.619 11.98 4.25 39.24 3.68
1938 2126 2.826371 GCTTTGTTTTTAAGCATGCGC 58.174 42.857 13.01 0.00 45.64 6.09
1959 2147 2.577593 GTGGGAGTACTGCCGGAC 59.422 66.667 26.23 17.02 44.85 4.79
1974 2162 1.676014 CCGGACTCAACCACCTTCATC 60.676 57.143 0.00 0.00 0.00 2.92
2112 2300 0.700564 ATCTTTTCAGCAGGGCAGGA 59.299 50.000 0.00 0.00 0.00 3.86
2434 2622 4.137543 GAGTTTGTGATTTGGAGGTGAGT 58.862 43.478 0.00 0.00 0.00 3.41
2485 2673 6.280643 TGTCATTGTATGGATTAGGAAGTCG 58.719 40.000 0.00 0.00 0.00 4.18
2496 2684 5.107453 GGATTAGGAAGTCGTCGCATAAATG 60.107 44.000 0.00 0.00 0.00 2.32
2531 2719 4.167554 TCAAACGTTGCTTGTTTCAAGT 57.832 36.364 0.00 0.00 37.44 3.16
2547 2837 9.921637 TTGTTTCAAGTTGAGACACTTATTTTT 57.078 25.926 24.47 0.00 40.55 1.94
2552 2845 7.505585 TCAAGTTGAGACACTTATTTTTGGGAT 59.494 33.333 0.08 0.00 35.10 3.85
2622 2915 9.228949 GTTGATTGCTGGATAGAGATCAATATT 57.771 33.333 0.00 0.00 38.18 1.28
2626 2919 9.902684 ATTGCTGGATAGAGATCAATATTTAGG 57.097 33.333 0.00 0.00 33.27 2.69
2627 2920 7.855375 TGCTGGATAGAGATCAATATTTAGGG 58.145 38.462 0.00 0.00 33.27 3.53
2628 2921 6.765512 GCTGGATAGAGATCAATATTTAGGGC 59.234 42.308 0.00 0.00 33.27 5.19
2629 2922 7.365473 GCTGGATAGAGATCAATATTTAGGGCT 60.365 40.741 0.00 0.00 33.27 5.19
2630 2923 9.206690 CTGGATAGAGATCAATATTTAGGGCTA 57.793 37.037 0.00 0.00 33.27 3.93
2631 2924 9.206690 TGGATAGAGATCAATATTTAGGGCTAG 57.793 37.037 0.00 0.00 33.27 3.42
2632 2925 9.427821 GGATAGAGATCAATATTTAGGGCTAGA 57.572 37.037 0.00 0.00 33.27 2.43
2634 2927 9.775539 ATAGAGATCAATATTTAGGGCTAGACA 57.224 33.333 0.00 0.00 0.00 3.41
2635 2928 8.677870 AGAGATCAATATTTAGGGCTAGACAT 57.322 34.615 0.00 0.00 0.00 3.06
2636 2929 9.775539 AGAGATCAATATTTAGGGCTAGACATA 57.224 33.333 0.00 0.00 0.00 2.29
2637 2930 9.810545 GAGATCAATATTTAGGGCTAGACATAC 57.189 37.037 0.00 0.00 0.00 2.39
2638 2931 9.326489 AGATCAATATTTAGGGCTAGACATACA 57.674 33.333 0.00 0.00 0.00 2.29
2641 2934 9.944376 TCAATATTTAGGGCTAGACATACATTC 57.056 33.333 0.00 0.00 0.00 2.67
2642 2935 9.950496 CAATATTTAGGGCTAGACATACATTCT 57.050 33.333 0.00 0.00 0.00 2.40
2644 2937 9.950496 ATATTTAGGGCTAGACATACATTCTTG 57.050 33.333 0.00 0.00 0.00 3.02
2645 2938 6.808321 TTAGGGCTAGACATACATTCTTGT 57.192 37.500 0.00 0.00 39.98 3.16
2646 2939 5.028549 AGGGCTAGACATACATTCTTGTG 57.971 43.478 0.00 0.00 36.53 3.33
2647 2940 3.561725 GGGCTAGACATACATTCTTGTGC 59.438 47.826 0.00 0.00 36.53 4.57
2648 2941 4.446371 GGCTAGACATACATTCTTGTGCT 58.554 43.478 0.00 0.00 36.53 4.40
2649 2942 4.509600 GGCTAGACATACATTCTTGTGCTC 59.490 45.833 0.00 0.00 36.53 4.26
2650 2943 4.509600 GCTAGACATACATTCTTGTGCTCC 59.490 45.833 0.00 0.00 36.53 4.70
2651 2944 4.558226 AGACATACATTCTTGTGCTCCA 57.442 40.909 0.00 0.00 36.53 3.86
2652 2945 4.910195 AGACATACATTCTTGTGCTCCAA 58.090 39.130 0.00 0.00 36.53 3.53
2653 2946 5.316167 AGACATACATTCTTGTGCTCCAAA 58.684 37.500 0.00 0.00 36.53 3.28
2654 2947 5.769662 AGACATACATTCTTGTGCTCCAAAA 59.230 36.000 0.00 0.00 36.53 2.44
2655 2948 5.772521 ACATACATTCTTGTGCTCCAAAAC 58.227 37.500 0.00 0.00 36.53 2.43
2656 2949 5.536161 ACATACATTCTTGTGCTCCAAAACT 59.464 36.000 0.00 0.00 36.53 2.66
2657 2950 6.040842 ACATACATTCTTGTGCTCCAAAACTT 59.959 34.615 0.00 0.00 36.53 2.66
2658 2951 4.936891 ACATTCTTGTGCTCCAAAACTTC 58.063 39.130 0.00 0.00 33.85 3.01
2659 2952 4.646492 ACATTCTTGTGCTCCAAAACTTCT 59.354 37.500 0.00 0.00 33.85 2.85
2660 2953 4.637483 TTCTTGTGCTCCAAAACTTCTG 57.363 40.909 0.00 0.00 31.20 3.02
2661 2954 3.620488 TCTTGTGCTCCAAAACTTCTGT 58.380 40.909 0.00 0.00 31.20 3.41
2662 2955 4.016444 TCTTGTGCTCCAAAACTTCTGTT 58.984 39.130 0.00 0.00 38.16 3.16
2663 2956 5.189928 TCTTGTGCTCCAAAACTTCTGTTA 58.810 37.500 0.00 0.00 34.96 2.41
2664 2957 5.827797 TCTTGTGCTCCAAAACTTCTGTTAT 59.172 36.000 0.00 0.00 34.96 1.89
2665 2958 5.437289 TGTGCTCCAAAACTTCTGTTATG 57.563 39.130 0.00 0.00 34.96 1.90
2666 2959 4.887071 TGTGCTCCAAAACTTCTGTTATGT 59.113 37.500 0.00 0.00 34.96 2.29
2667 2960 6.058833 TGTGCTCCAAAACTTCTGTTATGTA 58.941 36.000 0.00 0.00 34.96 2.29
2668 2961 6.204688 TGTGCTCCAAAACTTCTGTTATGTAG 59.795 38.462 0.00 0.00 34.96 2.74
2669 2962 5.181245 TGCTCCAAAACTTCTGTTATGTAGC 59.819 40.000 0.00 0.00 34.96 3.58
2670 2963 5.181245 GCTCCAAAACTTCTGTTATGTAGCA 59.819 40.000 0.00 0.00 34.96 3.49
2671 2964 6.293955 GCTCCAAAACTTCTGTTATGTAGCAA 60.294 38.462 0.00 0.00 34.96 3.91
2672 2965 7.202016 TCCAAAACTTCTGTTATGTAGCAAG 57.798 36.000 0.00 0.00 34.96 4.01
2673 2966 6.995686 TCCAAAACTTCTGTTATGTAGCAAGA 59.004 34.615 0.00 0.00 34.96 3.02
2674 2967 7.041372 TCCAAAACTTCTGTTATGTAGCAAGAC 60.041 37.037 0.00 0.00 34.96 3.01
2675 2968 7.255104 CCAAAACTTCTGTTATGTAGCAAGACA 60.255 37.037 0.00 0.00 34.96 3.41
2676 2969 7.986085 AAACTTCTGTTATGTAGCAAGACAT 57.014 32.000 4.59 4.59 42.68 3.06
2677 2970 9.502091 AAAACTTCTGTTATGTAGCAAGACATA 57.498 29.630 2.90 2.90 40.54 2.29
2678 2971 8.480643 AACTTCTGTTATGTAGCAAGACATAC 57.519 34.615 5.82 3.73 41.03 2.39
2679 2972 7.611770 ACTTCTGTTATGTAGCAAGACATACA 58.388 34.615 5.82 6.91 41.03 2.29
2680 2973 8.260818 ACTTCTGTTATGTAGCAAGACATACAT 58.739 33.333 5.82 3.60 41.03 2.29
2681 2974 9.102757 CTTCTGTTATGTAGCAAGACATACATT 57.897 33.333 3.43 0.00 41.03 2.71
2682 2975 8.648557 TCTGTTATGTAGCAAGACATACATTC 57.351 34.615 3.43 0.21 41.03 2.67
2683 2976 8.478066 TCTGTTATGTAGCAAGACATACATTCT 58.522 33.333 3.43 0.00 41.03 2.40
2684 2977 9.102757 CTGTTATGTAGCAAGACATACATTCTT 57.897 33.333 3.43 0.00 41.03 2.52
2927 3246 7.867305 TTCACATGTTTCCACTTGTACTTTA 57.133 32.000 0.00 0.00 38.84 1.85
3183 3504 2.256117 ACTTTTACGACAAGGCAGCT 57.744 45.000 0.00 0.00 0.00 4.24
3184 3505 2.572290 ACTTTTACGACAAGGCAGCTT 58.428 42.857 0.00 0.00 0.00 3.74
3185 3506 3.735591 ACTTTTACGACAAGGCAGCTTA 58.264 40.909 0.00 0.00 0.00 3.09
3186 3507 4.324267 ACTTTTACGACAAGGCAGCTTAT 58.676 39.130 0.00 0.00 0.00 1.73
3187 3508 4.154195 ACTTTTACGACAAGGCAGCTTATG 59.846 41.667 0.00 0.00 0.00 1.90
3188 3509 3.603158 TTACGACAAGGCAGCTTATGA 57.397 42.857 0.00 0.00 0.00 2.15
3189 3510 2.472695 ACGACAAGGCAGCTTATGAA 57.527 45.000 0.00 0.00 0.00 2.57
3190 3511 2.350522 ACGACAAGGCAGCTTATGAAG 58.649 47.619 0.00 0.00 0.00 3.02
3191 3512 2.289694 ACGACAAGGCAGCTTATGAAGT 60.290 45.455 0.00 0.00 0.00 3.01
3192 3513 3.056107 ACGACAAGGCAGCTTATGAAGTA 60.056 43.478 0.00 0.00 0.00 2.24
3193 3514 3.307242 CGACAAGGCAGCTTATGAAGTAC 59.693 47.826 0.00 0.00 0.00 2.73
3194 3515 4.508662 GACAAGGCAGCTTATGAAGTACT 58.491 43.478 0.00 0.00 0.00 2.73
3195 3516 4.508662 ACAAGGCAGCTTATGAAGTACTC 58.491 43.478 0.00 0.00 0.00 2.59
3196 3517 3.828875 AGGCAGCTTATGAAGTACTCC 57.171 47.619 0.00 0.00 0.00 3.85
3197 3518 2.436173 AGGCAGCTTATGAAGTACTCCC 59.564 50.000 0.00 0.00 0.00 4.30
3198 3519 2.485657 GGCAGCTTATGAAGTACTCCCC 60.486 54.545 0.00 0.00 0.00 4.81
3199 3520 2.485657 GCAGCTTATGAAGTACTCCCCC 60.486 54.545 0.00 0.00 0.00 5.40
3200 3521 2.040178 AGCTTATGAAGTACTCCCCCG 58.960 52.381 0.00 0.00 0.00 5.73
3201 3522 1.761198 GCTTATGAAGTACTCCCCCGT 59.239 52.381 0.00 0.00 0.00 5.28
3202 3523 2.169978 GCTTATGAAGTACTCCCCCGTT 59.830 50.000 0.00 0.00 0.00 4.44
3203 3524 3.740452 GCTTATGAAGTACTCCCCCGTTC 60.740 52.174 0.00 0.00 0.00 3.95
3204 3525 1.201424 ATGAAGTACTCCCCCGTTCC 58.799 55.000 0.00 0.00 0.00 3.62
3205 3526 0.115745 TGAAGTACTCCCCCGTTCCT 59.884 55.000 0.00 0.00 0.00 3.36
3206 3527 1.358787 TGAAGTACTCCCCCGTTCCTA 59.641 52.381 0.00 0.00 0.00 2.94
3207 3528 2.225343 TGAAGTACTCCCCCGTTCCTAA 60.225 50.000 0.00 0.00 0.00 2.69
3208 3529 2.629017 AGTACTCCCCCGTTCCTAAA 57.371 50.000 0.00 0.00 0.00 1.85
3209 3530 3.126323 AGTACTCCCCCGTTCCTAAAT 57.874 47.619 0.00 0.00 0.00 1.40
3210 3531 4.270317 AGTACTCCCCCGTTCCTAAATA 57.730 45.455 0.00 0.00 0.00 1.40
3211 3532 4.824276 AGTACTCCCCCGTTCCTAAATAT 58.176 43.478 0.00 0.00 0.00 1.28
3212 3533 5.222086 AGTACTCCCCCGTTCCTAAATATT 58.778 41.667 0.00 0.00 0.00 1.28
3213 3534 5.668991 AGTACTCCCCCGTTCCTAAATATTT 59.331 40.000 5.89 5.89 0.00 1.40
3214 3535 4.788679 ACTCCCCCGTTCCTAAATATTTG 58.211 43.478 11.05 1.40 0.00 2.32
3215 3536 4.228895 ACTCCCCCGTTCCTAAATATTTGT 59.771 41.667 11.05 0.00 0.00 2.83
3216 3537 4.784177 TCCCCCGTTCCTAAATATTTGTC 58.216 43.478 11.05 0.00 0.00 3.18
3217 3538 4.475747 TCCCCCGTTCCTAAATATTTGTCT 59.524 41.667 11.05 0.00 0.00 3.41
3218 3539 5.044698 TCCCCCGTTCCTAAATATTTGTCTT 60.045 40.000 11.05 0.00 0.00 3.01
3219 3540 5.655090 CCCCCGTTCCTAAATATTTGTCTTT 59.345 40.000 11.05 0.00 0.00 2.52
3220 3541 6.153851 CCCCCGTTCCTAAATATTTGTCTTTT 59.846 38.462 11.05 0.00 0.00 2.27
3221 3542 7.310175 CCCCCGTTCCTAAATATTTGTCTTTTT 60.310 37.037 11.05 0.00 0.00 1.94
3222 3543 8.741841 CCCCGTTCCTAAATATTTGTCTTTTTA 58.258 33.333 11.05 0.00 0.00 1.52
3223 3544 9.783256 CCCGTTCCTAAATATTTGTCTTTTTAG 57.217 33.333 11.05 0.00 33.47 1.85
3255 3576 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
3256 3577 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
3257 3578 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
3258 3579 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
3259 3580 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
3260 3581 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
3261 3582 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
3262 3583 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
3263 3584 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
3264 3585 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
3266 3587 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
3284 3605 8.723942 AGACATATTTTAGAGTGTGGATTCAC 57.276 34.615 0.00 0.00 43.87 3.18
3293 3614 4.510038 AGTGTGGATTCACTCATTTTGC 57.490 40.909 5.55 0.00 44.07 3.68
3294 3615 4.147321 AGTGTGGATTCACTCATTTTGCT 58.853 39.130 5.55 0.00 44.07 3.91
3295 3616 4.586001 AGTGTGGATTCACTCATTTTGCTT 59.414 37.500 5.55 0.00 44.07 3.91
3296 3617 4.919754 GTGTGGATTCACTCATTTTGCTTC 59.080 41.667 5.55 0.00 43.94 3.86
3297 3618 4.161333 GTGGATTCACTCATTTTGCTTCG 58.839 43.478 0.00 0.00 40.58 3.79
3298 3619 3.820467 TGGATTCACTCATTTTGCTTCGT 59.180 39.130 0.00 0.00 0.00 3.85
3299 3620 5.000591 TGGATTCACTCATTTTGCTTCGTA 58.999 37.500 0.00 0.00 0.00 3.43
3300 3621 5.647658 TGGATTCACTCATTTTGCTTCGTAT 59.352 36.000 0.00 0.00 0.00 3.06
3301 3622 5.967674 GGATTCACTCATTTTGCTTCGTATG 59.032 40.000 0.00 0.00 0.00 2.39
3302 3623 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
3303 3624 7.201609 GGATTCACTCATTTTGCTTCGTATGTA 60.202 37.037 0.00 0.00 0.00 2.29
3304 3625 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
3305 3626 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
3306 3627 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
3307 3628 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
3308 3629 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
3309 3630 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
3310 3631 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
3311 3632 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
3312 3633 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
3313 3634 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
3314 3635 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
3315 3636 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
3316 3637 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
3317 3638 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
3318 3639 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
3319 3640 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
3320 3641 7.375834 TCGTATGTAGTCACTTGTTGAAATCT 58.624 34.615 0.00 0.00 35.39 2.40
3321 3642 7.541091 TCGTATGTAGTCACTTGTTGAAATCTC 59.459 37.037 0.00 0.00 35.39 2.75
3322 3643 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
3323 3644 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
3324 3645 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
3325 3646 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
3326 3647 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
3327 3648 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
3328 3649 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
3329 3650 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
3330 3651 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
3331 3652 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
3332 3653 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
3333 3654 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
3346 3667 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3347 3668 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3348 3669 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3349 3670 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3350 3671 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3351 3672 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3352 3673 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3353 3674 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
3354 3675 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
3355 3676 6.667558 AATATTTAGGAACGGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
3356 3677 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
3357 3678 3.967467 TTAGGAACGGAGGGAGTAGAT 57.033 47.619 0.00 0.00 0.00 1.98
3358 3679 5.393068 TTTAGGAACGGAGGGAGTAGATA 57.607 43.478 0.00 0.00 0.00 1.98
3359 3680 5.595814 TTAGGAACGGAGGGAGTAGATAT 57.404 43.478 0.00 0.00 0.00 1.63
3360 3681 4.036941 AGGAACGGAGGGAGTAGATATC 57.963 50.000 0.00 0.00 0.00 1.63
3361 3682 3.398292 AGGAACGGAGGGAGTAGATATCA 59.602 47.826 5.32 0.00 0.00 2.15
3362 3683 3.759618 GGAACGGAGGGAGTAGATATCAG 59.240 52.174 5.32 0.00 0.00 2.90
3363 3684 2.797786 ACGGAGGGAGTAGATATCAGC 58.202 52.381 5.32 0.00 0.00 4.26
3364 3685 1.740585 CGGAGGGAGTAGATATCAGCG 59.259 57.143 5.32 0.00 0.00 5.18
3365 3686 2.797786 GGAGGGAGTAGATATCAGCGT 58.202 52.381 5.32 0.00 0.00 5.07
3366 3687 3.619242 CGGAGGGAGTAGATATCAGCGTA 60.619 52.174 5.32 0.00 0.00 4.42
3367 3688 4.528920 GGAGGGAGTAGATATCAGCGTAT 58.471 47.826 5.32 0.00 0.00 3.06
3368 3689 4.951094 GGAGGGAGTAGATATCAGCGTATT 59.049 45.833 5.32 0.00 0.00 1.89
3369 3690 6.120905 GGAGGGAGTAGATATCAGCGTATTA 58.879 44.000 5.32 0.00 0.00 0.98
3370 3691 6.773685 GGAGGGAGTAGATATCAGCGTATTAT 59.226 42.308 5.32 0.00 0.00 1.28
3371 3692 7.255312 GGAGGGAGTAGATATCAGCGTATTATG 60.255 44.444 5.32 0.00 0.00 1.90
3372 3693 7.120051 AGGGAGTAGATATCAGCGTATTATGT 58.880 38.462 5.32 0.00 0.00 2.29
3373 3694 7.283580 AGGGAGTAGATATCAGCGTATTATGTC 59.716 40.741 5.32 0.00 0.00 3.06
3374 3695 7.067129 GGGAGTAGATATCAGCGTATTATGTCA 59.933 40.741 5.32 0.00 0.00 3.58
3375 3696 8.459635 GGAGTAGATATCAGCGTATTATGTCAA 58.540 37.037 5.32 0.00 0.00 3.18
3376 3697 9.841880 GAGTAGATATCAGCGTATTATGTCAAA 57.158 33.333 5.32 0.00 0.00 2.69
3399 3720 4.739587 AAAAGTACTCCCTCCGAGATTC 57.260 45.455 0.00 0.00 41.63 2.52
3400 3721 2.368311 AGTACTCCCTCCGAGATTCC 57.632 55.000 0.00 0.00 41.63 3.01
3401 3722 1.569548 AGTACTCCCTCCGAGATTCCA 59.430 52.381 0.00 0.00 41.63 3.53
3402 3723 1.957877 GTACTCCCTCCGAGATTCCAG 59.042 57.143 0.00 0.00 41.63 3.86
3403 3724 1.045911 ACTCCCTCCGAGATTCCAGC 61.046 60.000 0.00 0.00 41.63 4.85
3404 3725 2.081425 CTCCCTCCGAGATTCCAGCG 62.081 65.000 0.00 0.00 41.63 5.18
3405 3726 2.427245 CCCTCCGAGATTCCAGCGT 61.427 63.158 0.00 0.00 0.00 5.07
3406 3727 1.227089 CCTCCGAGATTCCAGCGTG 60.227 63.158 0.00 0.00 0.00 5.34
3407 3728 1.513158 CTCCGAGATTCCAGCGTGT 59.487 57.895 0.00 0.00 0.00 4.49
3408 3729 0.526524 CTCCGAGATTCCAGCGTGTC 60.527 60.000 0.00 0.00 0.00 3.67
3409 3730 1.215382 CCGAGATTCCAGCGTGTCA 59.785 57.895 0.00 0.00 0.00 3.58
3410 3731 1.078759 CCGAGATTCCAGCGTGTCAC 61.079 60.000 0.00 0.00 0.00 3.67
3411 3732 1.078759 CGAGATTCCAGCGTGTCACC 61.079 60.000 0.00 0.00 0.00 4.02
3412 3733 0.741221 GAGATTCCAGCGTGTCACCC 60.741 60.000 0.00 0.00 0.00 4.61
3413 3734 1.003839 GATTCCAGCGTGTCACCCA 60.004 57.895 0.00 0.00 0.00 4.51
3414 3735 0.392998 GATTCCAGCGTGTCACCCAT 60.393 55.000 0.00 0.00 0.00 4.00
3415 3736 0.038166 ATTCCAGCGTGTCACCCATT 59.962 50.000 0.00 0.00 0.00 3.16
3416 3737 0.179004 TTCCAGCGTGTCACCCATTT 60.179 50.000 0.00 0.00 0.00 2.32
3417 3738 0.179004 TCCAGCGTGTCACCCATTTT 60.179 50.000 0.00 0.00 0.00 1.82
3418 3739 0.039256 CCAGCGTGTCACCCATTTTG 60.039 55.000 0.00 0.00 0.00 2.44
3419 3740 0.667993 CAGCGTGTCACCCATTTTGT 59.332 50.000 0.00 0.00 0.00 2.83
3420 3741 1.066908 CAGCGTGTCACCCATTTTGTT 59.933 47.619 0.00 0.00 0.00 2.83
3421 3742 2.292016 CAGCGTGTCACCCATTTTGTTA 59.708 45.455 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.447314 CCGAAAGTACGGCACCTCC 60.447 63.158 0.00 0.00 46.20 4.30
10 11 4.180496 CCGAAAGTACGGCACCTC 57.820 61.111 0.00 0.00 46.20 3.85
19 20 4.130118 GACCGATCCTAGTACCGAAAGTA 58.870 47.826 0.00 0.00 0.00 2.24
20 21 2.948315 GACCGATCCTAGTACCGAAAGT 59.052 50.000 0.00 0.00 0.00 2.66
21 22 2.032204 CGACCGATCCTAGTACCGAAAG 60.032 54.545 0.00 0.00 0.00 2.62
22 23 1.942657 CGACCGATCCTAGTACCGAAA 59.057 52.381 0.00 0.00 0.00 3.46
23 24 1.586422 CGACCGATCCTAGTACCGAA 58.414 55.000 0.00 0.00 0.00 4.30
24 25 0.250038 CCGACCGATCCTAGTACCGA 60.250 60.000 0.00 0.00 0.00 4.69
25 26 0.250038 TCCGACCGATCCTAGTACCG 60.250 60.000 0.00 0.00 0.00 4.02
26 27 2.083002 GATCCGACCGATCCTAGTACC 58.917 57.143 0.00 0.00 41.51 3.34
27 28 1.731160 CGATCCGACCGATCCTAGTAC 59.269 57.143 0.00 0.00 44.07 2.73
28 29 1.345741 ACGATCCGACCGATCCTAGTA 59.654 52.381 0.00 0.00 44.07 1.82
29 30 0.108207 ACGATCCGACCGATCCTAGT 59.892 55.000 0.00 0.00 44.07 2.57
30 31 0.517755 CACGATCCGACCGATCCTAG 59.482 60.000 0.00 0.00 44.07 3.02
31 32 0.107268 TCACGATCCGACCGATCCTA 59.893 55.000 0.00 0.00 44.07 2.94
32 33 0.750546 TTCACGATCCGACCGATCCT 60.751 55.000 0.00 0.00 44.07 3.24
33 34 0.317938 CTTCACGATCCGACCGATCC 60.318 60.000 0.00 0.00 44.07 3.36
34 35 0.661552 TCTTCACGATCCGACCGATC 59.338 55.000 0.00 0.00 43.58 3.69
35 36 0.381089 GTCTTCACGATCCGACCGAT 59.619 55.000 0.00 0.00 0.00 4.18
36 37 1.798735 GTCTTCACGATCCGACCGA 59.201 57.895 0.00 0.00 0.00 4.69
37 38 4.379221 GTCTTCACGATCCGACCG 57.621 61.111 0.00 0.00 0.00 4.79
47 48 1.912110 GATGTAGTCGTGCGTCTTCAC 59.088 52.381 0.00 0.00 0.00 3.18
48 49 1.538075 TGATGTAGTCGTGCGTCTTCA 59.462 47.619 0.00 0.00 0.00 3.02
49 50 2.257974 TGATGTAGTCGTGCGTCTTC 57.742 50.000 0.00 0.00 0.00 2.87
50 51 2.717580 TTGATGTAGTCGTGCGTCTT 57.282 45.000 0.00 0.00 0.00 3.01
51 52 2.791503 CGATTGATGTAGTCGTGCGTCT 60.792 50.000 0.00 0.00 34.25 4.18
52 53 1.513178 CGATTGATGTAGTCGTGCGTC 59.487 52.381 0.00 0.00 34.25 5.19
53 54 1.545759 CGATTGATGTAGTCGTGCGT 58.454 50.000 0.00 0.00 34.25 5.24
58 59 3.917985 TGACAACACGATTGATGTAGTCG 59.082 43.478 10.45 0.00 38.76 4.18
59 60 7.391786 GTTATGACAACACGATTGATGTAGTC 58.608 38.462 10.45 0.00 38.76 2.59
60 61 6.034577 CGTTATGACAACACGATTGATGTAGT 59.965 38.462 10.45 0.00 38.76 2.73
61 62 6.402816 CGTTATGACAACACGATTGATGTAG 58.597 40.000 10.45 0.00 38.76 2.74
62 63 5.220322 GCGTTATGACAACACGATTGATGTA 60.220 40.000 12.61 0.00 38.76 2.29
63 64 4.435518 GCGTTATGACAACACGATTGATGT 60.436 41.667 12.61 0.32 41.19 3.06
64 65 4.021822 GCGTTATGACAACACGATTGATG 58.978 43.478 12.61 0.00 0.00 3.07
65 66 3.063452 GGCGTTATGACAACACGATTGAT 59.937 43.478 12.61 0.00 0.00 2.57
66 67 2.413796 GGCGTTATGACAACACGATTGA 59.586 45.455 12.61 0.00 0.00 2.57
67 68 2.415168 AGGCGTTATGACAACACGATTG 59.585 45.455 12.61 0.00 0.00 2.67
68 69 2.671396 GAGGCGTTATGACAACACGATT 59.329 45.455 12.61 1.42 0.00 3.34
69 70 2.268298 GAGGCGTTATGACAACACGAT 58.732 47.619 12.61 1.96 0.00 3.73
70 71 1.670674 GGAGGCGTTATGACAACACGA 60.671 52.381 12.61 0.00 0.00 4.35
71 72 0.719465 GGAGGCGTTATGACAACACG 59.281 55.000 5.60 5.60 0.00 4.49
72 73 0.719465 CGGAGGCGTTATGACAACAC 59.281 55.000 0.00 0.00 0.00 3.32
73 74 1.017177 GCGGAGGCGTTATGACAACA 61.017 55.000 0.00 0.00 0.00 3.33
74 75 0.739813 AGCGGAGGCGTTATGACAAC 60.740 55.000 0.00 0.00 46.35 3.32
75 76 0.036765 AAGCGGAGGCGTTATGACAA 60.037 50.000 0.00 0.00 46.35 3.18
76 77 0.818938 TAAGCGGAGGCGTTATGACA 59.181 50.000 0.00 0.00 46.35 3.58
77 78 1.206523 GTAAGCGGAGGCGTTATGAC 58.793 55.000 0.00 0.00 46.35 3.06
78 79 0.248743 CGTAAGCGGAGGCGTTATGA 60.249 55.000 0.00 0.00 46.35 2.15
79 80 2.213483 CGTAAGCGGAGGCGTTATG 58.787 57.895 0.00 0.00 46.35 1.90
80 81 4.724022 CGTAAGCGGAGGCGTTAT 57.276 55.556 0.00 0.00 46.35 1.89
90 91 1.354506 CCCTCGTAGACCGTAAGCG 59.645 63.158 0.00 0.00 37.94 4.68
91 92 1.332065 GTACCCTCGTAGACCGTAAGC 59.668 57.143 0.00 0.00 37.94 3.09
92 93 1.594862 CGTACCCTCGTAGACCGTAAG 59.405 57.143 0.00 0.00 37.94 2.34
93 94 1.066430 ACGTACCCTCGTAGACCGTAA 60.066 52.381 0.00 0.00 42.35 3.18
94 95 0.535335 ACGTACCCTCGTAGACCGTA 59.465 55.000 0.00 0.00 42.35 4.02
95 96 1.021390 CACGTACCCTCGTAGACCGT 61.021 60.000 0.00 0.00 42.27 4.83
96 97 1.709147 CCACGTACCCTCGTAGACCG 61.709 65.000 0.00 0.00 42.27 4.79
97 98 0.392998 TCCACGTACCCTCGTAGACC 60.393 60.000 0.00 0.00 42.27 3.85
98 99 0.729690 GTCCACGTACCCTCGTAGAC 59.270 60.000 0.00 2.79 42.50 2.59
99 100 0.324614 TGTCCACGTACCCTCGTAGA 59.675 55.000 0.00 0.00 42.27 2.59
100 101 1.135575 GTTGTCCACGTACCCTCGTAG 60.136 57.143 0.00 0.00 42.27 3.51
101 102 0.881118 GTTGTCCACGTACCCTCGTA 59.119 55.000 0.00 0.00 42.27 3.43
102 103 1.108727 TGTTGTCCACGTACCCTCGT 61.109 55.000 0.00 0.00 45.10 4.18
103 104 0.665369 GTGTTGTCCACGTACCCTCG 60.665 60.000 0.00 0.00 33.61 4.63
104 105 3.206090 GTGTTGTCCACGTACCCTC 57.794 57.895 0.00 0.00 33.61 4.30
112 113 3.288092 AGAAGGGAAAAGTGTTGTCCAC 58.712 45.455 0.00 0.00 44.89 4.02
113 114 3.551846 GAGAAGGGAAAAGTGTTGTCCA 58.448 45.455 0.00 0.00 32.70 4.02
114 115 2.548480 CGAGAAGGGAAAAGTGTTGTCC 59.452 50.000 0.00 0.00 0.00 4.02
115 116 3.203716 ACGAGAAGGGAAAAGTGTTGTC 58.796 45.455 0.00 0.00 0.00 3.18
116 117 3.277142 ACGAGAAGGGAAAAGTGTTGT 57.723 42.857 0.00 0.00 0.00 3.32
117 118 3.792124 GCAACGAGAAGGGAAAAGTGTTG 60.792 47.826 0.00 0.00 38.68 3.33
118 119 2.357952 GCAACGAGAAGGGAAAAGTGTT 59.642 45.455 0.00 0.00 0.00 3.32
119 120 1.947456 GCAACGAGAAGGGAAAAGTGT 59.053 47.619 0.00 0.00 0.00 3.55
120 121 2.222027 AGCAACGAGAAGGGAAAAGTG 58.778 47.619 0.00 0.00 0.00 3.16
121 122 2.640316 AGCAACGAGAAGGGAAAAGT 57.360 45.000 0.00 0.00 0.00 2.66
122 123 3.181506 GCATAGCAACGAGAAGGGAAAAG 60.182 47.826 0.00 0.00 0.00 2.27
123 124 2.747446 GCATAGCAACGAGAAGGGAAAA 59.253 45.455 0.00 0.00 0.00 2.29
124 125 2.290008 TGCATAGCAACGAGAAGGGAAA 60.290 45.455 0.00 0.00 34.76 3.13
125 126 1.277842 TGCATAGCAACGAGAAGGGAA 59.722 47.619 0.00 0.00 34.76 3.97
126 127 0.901827 TGCATAGCAACGAGAAGGGA 59.098 50.000 0.00 0.00 34.76 4.20
127 128 1.869767 GATGCATAGCAACGAGAAGGG 59.130 52.381 0.00 0.00 43.62 3.95
128 129 2.286294 GTGATGCATAGCAACGAGAAGG 59.714 50.000 0.00 0.00 43.62 3.46
129 130 2.286294 GGTGATGCATAGCAACGAGAAG 59.714 50.000 0.00 0.00 43.62 2.85
130 131 2.279741 GGTGATGCATAGCAACGAGAA 58.720 47.619 0.00 0.00 43.62 2.87
131 132 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
132 133 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
133 134 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
134 135 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
135 136 4.999311 TCTATCATGGTGATGCATAGCAAC 59.001 41.667 0.00 0.00 43.62 4.17
136 137 5.231702 TCTATCATGGTGATGCATAGCAA 57.768 39.130 0.00 0.00 43.62 3.91
137 138 4.895668 TCTATCATGGTGATGCATAGCA 57.104 40.909 0.00 4.86 44.86 3.49
138 139 5.672503 AGATCTATCATGGTGATGCATAGC 58.327 41.667 0.00 0.00 37.70 2.97
139 140 6.037281 GCAAGATCTATCATGGTGATGCATAG 59.963 42.308 0.00 0.00 37.70 2.23
140 141 5.878669 GCAAGATCTATCATGGTGATGCATA 59.121 40.000 0.00 0.00 37.70 3.14
141 142 4.700692 GCAAGATCTATCATGGTGATGCAT 59.299 41.667 0.00 0.00 37.70 3.96
142 143 4.070009 GCAAGATCTATCATGGTGATGCA 58.930 43.478 0.00 0.00 37.70 3.96
143 144 3.124806 CGCAAGATCTATCATGGTGATGC 59.875 47.826 0.00 0.00 37.29 3.91
144 145 4.563061 TCGCAAGATCTATCATGGTGATG 58.437 43.478 0.00 0.00 45.01 3.07
145 146 4.879197 TCGCAAGATCTATCATGGTGAT 57.121 40.909 0.00 0.00 45.01 3.06
180 181 7.718753 TGTAGGGGAACGTAGTAATTTCAAAAA 59.281 33.333 0.00 0.00 45.00 1.94
181 182 7.222872 TGTAGGGGAACGTAGTAATTTCAAAA 58.777 34.615 0.00 0.00 45.00 2.44
182 183 6.767456 TGTAGGGGAACGTAGTAATTTCAAA 58.233 36.000 0.00 0.00 45.00 2.69
183 184 6.014327 ACTGTAGGGGAACGTAGTAATTTCAA 60.014 38.462 0.00 0.00 45.00 2.69
184 185 5.481473 ACTGTAGGGGAACGTAGTAATTTCA 59.519 40.000 0.00 0.00 45.00 2.69
185 186 5.970592 ACTGTAGGGGAACGTAGTAATTTC 58.029 41.667 0.00 0.00 45.00 2.17
186 187 6.406288 GCTACTGTAGGGGAACGTAGTAATTT 60.406 42.308 16.09 0.00 45.00 1.82
187 188 5.068329 GCTACTGTAGGGGAACGTAGTAATT 59.932 44.000 16.09 0.00 45.00 1.40
188 189 4.582240 GCTACTGTAGGGGAACGTAGTAAT 59.418 45.833 16.09 0.00 45.00 1.89
189 190 3.947834 GCTACTGTAGGGGAACGTAGTAA 59.052 47.826 16.09 0.00 45.00 2.24
190 191 3.545703 GCTACTGTAGGGGAACGTAGTA 58.454 50.000 16.09 0.00 45.00 1.82
192 193 1.680207 GGCTACTGTAGGGGAACGTAG 59.320 57.143 16.09 0.00 33.52 3.51
193 194 1.285962 AGGCTACTGTAGGGGAACGTA 59.714 52.381 16.09 0.00 0.00 3.57
194 195 0.040794 AGGCTACTGTAGGGGAACGT 59.959 55.000 16.09 0.00 0.00 3.99
195 196 0.745468 GAGGCTACTGTAGGGGAACG 59.255 60.000 16.09 0.00 0.00 3.95
196 197 1.121378 GGAGGCTACTGTAGGGGAAC 58.879 60.000 16.09 0.00 0.00 3.62
197 198 0.714180 TGGAGGCTACTGTAGGGGAA 59.286 55.000 16.09 0.00 0.00 3.97
198 199 0.032416 GTGGAGGCTACTGTAGGGGA 60.032 60.000 16.09 0.00 0.00 4.81
199 200 0.325296 TGTGGAGGCTACTGTAGGGG 60.325 60.000 16.09 0.00 0.00 4.79
200 201 1.689273 GATGTGGAGGCTACTGTAGGG 59.311 57.143 16.09 0.00 0.00 3.53
201 202 1.689273 GGATGTGGAGGCTACTGTAGG 59.311 57.143 16.09 0.00 0.00 3.18
202 203 2.363680 CTGGATGTGGAGGCTACTGTAG 59.636 54.545 10.48 10.48 0.00 2.74
203 204 2.024369 TCTGGATGTGGAGGCTACTGTA 60.024 50.000 0.00 0.00 0.00 2.74
204 205 1.198713 CTGGATGTGGAGGCTACTGT 58.801 55.000 0.00 0.00 0.00 3.55
205 206 1.489481 TCTGGATGTGGAGGCTACTG 58.511 55.000 0.00 0.00 0.00 2.74
226 227 6.154877 TGTGGTCTGCAATGAAATTATTCCAT 59.845 34.615 0.00 0.00 32.46 3.41
232 233 5.375417 CAGTGTGGTCTGCAATGAAATTA 57.625 39.130 0.00 0.00 32.46 1.40
256 257 4.014406 GGACTGTTTAATCGGTTCCCAAT 58.986 43.478 0.00 0.00 0.00 3.16
284 285 0.894184 AAGACTCGCTTCCCTCGTCA 60.894 55.000 0.00 0.00 28.17 4.35
290 291 1.578206 GCCACAAAGACTCGCTTCCC 61.578 60.000 0.00 0.00 35.24 3.97
295 296 0.166814 GACATGCCACAAAGACTCGC 59.833 55.000 0.00 0.00 0.00 5.03
407 408 1.134521 GTCTTGGAGTGTGGTGTGTGA 60.135 52.381 0.00 0.00 0.00 3.58
430 431 1.781786 GGCTGGTCCAGAGTATGAGA 58.218 55.000 23.77 0.00 32.44 3.27
432 433 0.033503 TCGGCTGGTCCAGAGTATGA 60.034 55.000 23.77 8.72 32.44 2.15
482 484 1.695242 ACGATGTTAGGTTGTGGTGGA 59.305 47.619 0.00 0.00 0.00 4.02
514 517 1.134560 GTAGCCTTTGTCTCGTCGGAT 59.865 52.381 0.00 0.00 0.00 4.18
515 518 0.524862 GTAGCCTTTGTCTCGTCGGA 59.475 55.000 0.00 0.00 0.00 4.55
517 520 0.526662 AGGTAGCCTTTGTCTCGTCG 59.473 55.000 0.00 0.00 0.00 5.12
519 522 0.037232 GCAGGTAGCCTTTGTCTCGT 60.037 55.000 0.00 0.00 37.23 4.18
520 523 2.755929 GCAGGTAGCCTTTGTCTCG 58.244 57.895 0.00 0.00 37.23 4.04
594 598 0.742990 TCAAAGCCACGCCGGAATAG 60.743 55.000 5.05 0.00 36.56 1.73
602 606 4.868195 GTGGAATCAAAGCCACGC 57.132 55.556 0.00 0.00 44.39 5.34
609 613 4.125703 GTTGCATTTGTGGTGGAATCAAA 58.874 39.130 0.00 0.00 35.92 2.69
651 656 4.213694 GCTTCGACGACAAGATAGGATAGA 59.786 45.833 0.00 0.00 0.00 1.98
812 818 3.458189 CAACTTTTCTCTCACCGACTGT 58.542 45.455 0.00 0.00 0.00 3.55
817 823 2.548480 GGTTCCAACTTTTCTCTCACCG 59.452 50.000 0.00 0.00 0.00 4.94
843 851 5.011329 AGTTTAACTCACCGAGGTTATCACA 59.989 40.000 0.00 0.00 33.35 3.58
844 852 5.347907 CAGTTTAACTCACCGAGGTTATCAC 59.652 44.000 0.00 0.00 33.35 3.06
854 862 4.124238 TCCTTCAACAGTTTAACTCACCG 58.876 43.478 0.00 0.00 0.00 4.94
863 871 2.587522 GCCCTTCTCCTTCAACAGTTT 58.412 47.619 0.00 0.00 0.00 2.66
887 895 3.181420 GCTATCCCACCTTCCTCCTACTA 60.181 52.174 0.00 0.00 0.00 1.82
888 896 2.426561 GCTATCCCACCTTCCTCCTACT 60.427 54.545 0.00 0.00 0.00 2.57
938 1126 2.543777 TGAGGGGAAAGCGTATATGC 57.456 50.000 9.00 9.00 0.00 3.14
991 1179 2.469516 GCGGGGCCATGTAAACGAG 61.470 63.158 4.39 0.00 0.00 4.18
1248 1436 1.686110 GGAGAAGGGCGAGAGGGAA 60.686 63.158 0.00 0.00 0.00 3.97
1303 1491 2.920912 TTCGAACAGGCGGAGGGT 60.921 61.111 0.00 0.00 0.00 4.34
1546 1734 3.747976 GCCGGTCCATGCAACCAC 61.748 66.667 1.90 3.88 36.53 4.16
1623 1811 1.739049 CTCCTCACCGCCTCTCATC 59.261 63.158 0.00 0.00 0.00 2.92
1632 1820 0.391263 GCCTTGTAACCTCCTCACCG 60.391 60.000 0.00 0.00 0.00 4.94
1633 1821 0.035343 GGCCTTGTAACCTCCTCACC 60.035 60.000 0.00 0.00 0.00 4.02
1645 1833 2.290071 ACGTTGCTACATTAGGCCTTGT 60.290 45.455 12.58 13.74 0.00 3.16
1656 1844 0.876777 CCGACACCAACGTTGCTACA 60.877 55.000 22.93 0.00 0.00 2.74
1659 1847 1.450669 AACCGACACCAACGTTGCT 60.451 52.632 22.93 6.51 0.00 3.91
1692 1880 1.197430 ACTCCAGGGAGCCAAGACTG 61.197 60.000 15.18 0.00 45.54 3.51
1693 1881 0.413832 TACTCCAGGGAGCCAAGACT 59.586 55.000 15.18 0.00 45.54 3.24
1768 1956 2.014335 TCCATCAGTGCATTCGTCAG 57.986 50.000 0.00 0.00 0.00 3.51
1938 2126 2.893398 GGCAGTACTCCCACCTCG 59.107 66.667 0.00 0.00 0.00 4.63
1974 2162 2.061773 CTACAAGCAGACAGAACCACG 58.938 52.381 0.00 0.00 0.00 4.94
2434 2622 5.304101 AGCAACTCAATTGAAAATGGGTACA 59.696 36.000 9.88 0.00 41.23 2.90
2496 2684 7.630924 AGCAACGTTTGATAAGATTACTATGC 58.369 34.615 0.00 0.00 0.00 3.14
2515 2703 3.786048 GTCTCAACTTGAAACAAGCAACG 59.214 43.478 10.78 0.00 0.00 4.10
2531 2719 6.310941 TCCATCCCAAAAATAAGTGTCTCAA 58.689 36.000 0.00 0.00 0.00 3.02
2547 2837 0.546122 GTGGCATGTACTCCATCCCA 59.454 55.000 0.00 0.00 39.17 4.37
2552 2845 3.101643 AGAGTAGTGGCATGTACTCCA 57.898 47.619 25.01 2.25 44.27 3.86
2622 2915 6.582636 CACAAGAATGTATGTCTAGCCCTAA 58.417 40.000 0.00 0.00 37.82 2.69
2624 2917 4.684485 GCACAAGAATGTATGTCTAGCCCT 60.684 45.833 0.00 0.00 37.82 5.19
2625 2918 3.561725 GCACAAGAATGTATGTCTAGCCC 59.438 47.826 0.00 0.00 37.82 5.19
2626 2919 4.446371 AGCACAAGAATGTATGTCTAGCC 58.554 43.478 0.00 0.00 37.82 3.93
2627 2920 4.509600 GGAGCACAAGAATGTATGTCTAGC 59.490 45.833 0.00 0.00 37.82 3.42
2628 2921 5.664457 TGGAGCACAAGAATGTATGTCTAG 58.336 41.667 0.00 0.00 37.82 2.43
2629 2922 5.675684 TGGAGCACAAGAATGTATGTCTA 57.324 39.130 0.00 0.00 37.82 2.59
2630 2923 4.558226 TGGAGCACAAGAATGTATGTCT 57.442 40.909 0.00 0.00 37.82 3.41
2631 2924 5.627499 TTTGGAGCACAAGAATGTATGTC 57.373 39.130 0.00 0.00 40.82 3.06
2632 2925 5.536161 AGTTTTGGAGCACAAGAATGTATGT 59.464 36.000 0.00 0.00 40.82 2.29
2633 2926 6.017400 AGTTTTGGAGCACAAGAATGTATG 57.983 37.500 0.00 0.00 40.82 2.39
2634 2927 6.491403 AGAAGTTTTGGAGCACAAGAATGTAT 59.509 34.615 0.00 0.00 40.82 2.29
2635 2928 5.827797 AGAAGTTTTGGAGCACAAGAATGTA 59.172 36.000 0.00 0.00 40.82 2.29
2636 2929 4.646492 AGAAGTTTTGGAGCACAAGAATGT 59.354 37.500 0.00 0.00 40.82 2.71
2637 2930 4.980434 CAGAAGTTTTGGAGCACAAGAATG 59.020 41.667 0.00 0.00 40.82 2.67
2638 2931 4.646492 ACAGAAGTTTTGGAGCACAAGAAT 59.354 37.500 0.00 0.00 40.82 2.40
2639 2932 4.016444 ACAGAAGTTTTGGAGCACAAGAA 58.984 39.130 0.00 0.00 40.82 2.52
2640 2933 3.620488 ACAGAAGTTTTGGAGCACAAGA 58.380 40.909 0.00 0.00 40.82 3.02
2641 2934 4.376340 AACAGAAGTTTTGGAGCACAAG 57.624 40.909 0.00 0.00 40.82 3.16
2642 2935 5.359576 ACATAACAGAAGTTTTGGAGCACAA 59.640 36.000 0.00 0.00 39.88 3.33
2643 2936 4.887071 ACATAACAGAAGTTTTGGAGCACA 59.113 37.500 0.00 0.00 39.88 4.57
2644 2937 5.438761 ACATAACAGAAGTTTTGGAGCAC 57.561 39.130 0.00 0.00 39.88 4.40
2645 2938 6.801539 CTACATAACAGAAGTTTTGGAGCA 57.198 37.500 0.00 0.00 39.62 4.26
2647 2940 6.801539 TGCTACATAACAGAAGTTTTGGAG 57.198 37.500 6.66 6.66 45.21 3.86
2648 2941 6.995686 TCTTGCTACATAACAGAAGTTTTGGA 59.004 34.615 0.00 0.00 39.88 3.53
2649 2942 7.078228 GTCTTGCTACATAACAGAAGTTTTGG 58.922 38.462 0.00 0.00 39.88 3.28
2650 2943 7.639039 TGTCTTGCTACATAACAGAAGTTTTG 58.361 34.615 0.00 0.00 40.91 2.44
2651 2944 7.801716 TGTCTTGCTACATAACAGAAGTTTT 57.198 32.000 0.00 0.00 39.15 2.43
2652 2945 7.986085 ATGTCTTGCTACATAACAGAAGTTT 57.014 32.000 0.00 0.00 38.31 2.66
2653 2946 8.094548 TGTATGTCTTGCTACATAACAGAAGTT 58.905 33.333 8.17 0.00 42.43 2.66
2654 2947 7.611770 TGTATGTCTTGCTACATAACAGAAGT 58.388 34.615 8.17 0.00 42.43 3.01
2655 2948 8.654230 ATGTATGTCTTGCTACATAACAGAAG 57.346 34.615 8.17 0.00 42.43 2.85
2656 2949 9.098355 GAATGTATGTCTTGCTACATAACAGAA 57.902 33.333 8.17 0.00 42.43 3.02
2657 2950 8.478066 AGAATGTATGTCTTGCTACATAACAGA 58.522 33.333 8.17 0.00 42.43 3.41
2658 2951 8.654230 AGAATGTATGTCTTGCTACATAACAG 57.346 34.615 8.17 0.00 42.43 3.16
2659 2952 8.882736 CAAGAATGTATGTCTTGCTACATAACA 58.117 33.333 8.17 8.99 43.94 2.41
2670 2963 3.441572 GCCAGCACAAGAATGTATGTCTT 59.558 43.478 0.00 0.00 37.82 3.01
2671 2964 3.012518 GCCAGCACAAGAATGTATGTCT 58.987 45.455 0.00 0.00 37.82 3.41
2672 2965 2.749076 TGCCAGCACAAGAATGTATGTC 59.251 45.455 0.00 0.00 37.82 3.06
2673 2966 2.794103 TGCCAGCACAAGAATGTATGT 58.206 42.857 0.00 0.00 37.82 2.29
2674 2967 3.853831 TTGCCAGCACAAGAATGTATG 57.146 42.857 0.00 0.00 37.82 2.39
2675 2968 5.887598 TCTTATTGCCAGCACAAGAATGTAT 59.112 36.000 11.54 0.00 37.82 2.29
2676 2969 5.252547 TCTTATTGCCAGCACAAGAATGTA 58.747 37.500 11.54 0.00 37.82 2.29
2677 2970 4.081406 TCTTATTGCCAGCACAAGAATGT 58.919 39.130 11.54 0.00 41.61 2.71
2678 2971 4.707030 TCTTATTGCCAGCACAAGAATG 57.293 40.909 11.54 0.00 30.97 2.67
2679 2972 5.419788 TCATTCTTATTGCCAGCACAAGAAT 59.580 36.000 23.25 23.25 43.32 2.40
2680 2973 4.766373 TCATTCTTATTGCCAGCACAAGAA 59.234 37.500 21.64 21.64 38.99 2.52
2681 2974 4.156556 GTCATTCTTATTGCCAGCACAAGA 59.843 41.667 10.38 10.38 31.96 3.02
2682 2975 4.082625 TGTCATTCTTATTGCCAGCACAAG 60.083 41.667 0.00 0.00 31.96 3.16
2683 2976 3.825585 TGTCATTCTTATTGCCAGCACAA 59.174 39.130 0.00 0.00 0.00 3.33
2684 2977 3.419943 TGTCATTCTTATTGCCAGCACA 58.580 40.909 0.00 0.00 0.00 4.57
2685 2978 4.439305 TTGTCATTCTTATTGCCAGCAC 57.561 40.909 0.00 0.00 0.00 4.40
2686 2979 6.293571 CGATATTGTCATTCTTATTGCCAGCA 60.294 38.462 0.00 0.00 0.00 4.41
2687 2980 6.082338 CGATATTGTCATTCTTATTGCCAGC 58.918 40.000 0.00 0.00 0.00 4.85
2688 2981 7.194607 ACGATATTGTCATTCTTATTGCCAG 57.805 36.000 0.00 0.00 0.00 4.85
2689 2982 7.566760 AACGATATTGTCATTCTTATTGCCA 57.433 32.000 0.00 0.00 0.00 4.92
2718 3011 6.345298 TGTGTCATTCAAACTTACTCTGTCA 58.655 36.000 0.00 0.00 0.00 3.58
2734 3027 6.886459 ACAGAAGTATAGGCAAATGTGTCATT 59.114 34.615 0.00 0.00 0.00 2.57
2960 3279 7.982252 TCATGGGAATCTAAAGCAGAGAATAT 58.018 34.615 0.00 0.00 36.48 1.28
2961 3280 7.290948 TCTCATGGGAATCTAAAGCAGAGAATA 59.709 37.037 0.00 0.00 36.48 1.75
3183 3504 2.767960 GGAACGGGGGAGTACTTCATAA 59.232 50.000 2.92 0.00 0.00 1.90
3184 3505 2.023695 AGGAACGGGGGAGTACTTCATA 60.024 50.000 2.92 0.00 0.00 2.15
3185 3506 1.201424 GGAACGGGGGAGTACTTCAT 58.799 55.000 2.92 0.00 0.00 2.57
3186 3507 0.115745 AGGAACGGGGGAGTACTTCA 59.884 55.000 2.92 0.00 0.00 3.02
3187 3508 2.149973 TAGGAACGGGGGAGTACTTC 57.850 55.000 0.00 0.00 0.00 3.01
3188 3509 2.629017 TTAGGAACGGGGGAGTACTT 57.371 50.000 0.00 0.00 0.00 2.24
3189 3510 2.629017 TTTAGGAACGGGGGAGTACT 57.371 50.000 0.00 0.00 0.00 2.73
3190 3511 5.557576 AATATTTAGGAACGGGGGAGTAC 57.442 43.478 0.00 0.00 0.00 2.73
3191 3512 5.429435 ACAAATATTTAGGAACGGGGGAGTA 59.571 40.000 0.00 0.00 0.00 2.59
3192 3513 4.228895 ACAAATATTTAGGAACGGGGGAGT 59.771 41.667 0.00 0.00 0.00 3.85
3193 3514 4.788679 ACAAATATTTAGGAACGGGGGAG 58.211 43.478 0.00 0.00 0.00 4.30
3194 3515 4.475747 AGACAAATATTTAGGAACGGGGGA 59.524 41.667 0.00 0.00 0.00 4.81
3195 3516 4.788679 AGACAAATATTTAGGAACGGGGG 58.211 43.478 0.00 0.00 0.00 5.40
3196 3517 6.769134 AAAGACAAATATTTAGGAACGGGG 57.231 37.500 0.00 0.00 0.00 5.73
3197 3518 9.783256 CTAAAAAGACAAATATTTAGGAACGGG 57.217 33.333 0.00 0.00 33.69 5.28
3222 3543 9.614792 GTATGTGGTAGTCCATTTAAAATCTCT 57.385 33.333 0.00 0.00 46.20 3.10
3223 3544 8.548721 CGTATGTGGTAGTCCATTTAAAATCTC 58.451 37.037 0.00 0.00 46.20 2.75
3224 3545 7.497909 CCGTATGTGGTAGTCCATTTAAAATCT 59.502 37.037 0.00 0.00 46.20 2.40
3225 3546 7.496591 TCCGTATGTGGTAGTCCATTTAAAATC 59.503 37.037 0.00 0.00 46.20 2.17
3226 3547 7.340256 TCCGTATGTGGTAGTCCATTTAAAAT 58.660 34.615 0.00 0.00 46.20 1.82
3227 3548 6.709281 TCCGTATGTGGTAGTCCATTTAAAA 58.291 36.000 0.00 0.00 46.20 1.52
3228 3549 6.297080 TCCGTATGTGGTAGTCCATTTAAA 57.703 37.500 0.00 0.00 46.20 1.52
3229 3550 5.936187 TCCGTATGTGGTAGTCCATTTAA 57.064 39.130 0.00 0.00 46.20 1.52
3230 3551 5.364446 ACATCCGTATGTGGTAGTCCATTTA 59.636 40.000 0.00 0.00 44.79 1.40
3231 3552 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
3232 3553 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
3233 3554 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
3234 3555 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
3235 3556 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
3236 3557 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
3237 3558 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
3238 3559 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
3240 3561 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
3258 3579 9.817809 GTGAATCCACACTCTAAAATATGTCTA 57.182 33.333 0.00 0.00 42.72 2.59
3259 3580 8.543774 AGTGAATCCACACTCTAAAATATGTCT 58.456 33.333 0.00 0.00 46.36 3.41
3260 3581 8.723942 AGTGAATCCACACTCTAAAATATGTC 57.276 34.615 0.00 0.00 46.36 3.06
3273 3594 4.510038 AGCAAAATGAGTGAATCCACAC 57.490 40.909 0.00 0.00 45.54 3.82
3274 3595 4.320421 CGAAGCAAAATGAGTGAATCCACA 60.320 41.667 0.00 0.00 45.54 4.17
3275 3596 4.161333 CGAAGCAAAATGAGTGAATCCAC 58.839 43.478 0.00 0.00 43.50 4.02
3276 3597 3.820467 ACGAAGCAAAATGAGTGAATCCA 59.180 39.130 0.00 0.00 0.00 3.41
3277 3598 4.425577 ACGAAGCAAAATGAGTGAATCC 57.574 40.909 0.00 0.00 0.00 3.01
3278 3599 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
3279 3600 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
3280 3601 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
3281 3602 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
3282 3603 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
3283 3604 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
3284 3605 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
3285 3606 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
3286 3607 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
3287 3608 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
3288 3609 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
3289 3610 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
3290 3611 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
3291 3612 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
3292 3613 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
3293 3614 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
3294 3615 7.870954 AGATTTCAACAAGTGACTACATACGAA 59.129 33.333 0.00 0.00 35.39 3.85
3295 3616 7.375834 AGATTTCAACAAGTGACTACATACGA 58.624 34.615 0.00 0.00 35.39 3.43
3296 3617 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
3297 3618 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
3299 3620 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
3300 3621 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
3301 3622 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
3302 3623 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
3303 3624 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
3304 3625 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
3305 3626 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
3306 3627 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
3307 3628 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
3320 3641 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3321 3642 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3322 3643 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3323 3644 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3324 3645 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3325 3646 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3326 3647 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3327 3648 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3328 3649 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3329 3650 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3330 3651 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3331 3652 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3332 3653 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
3333 3654 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
3334 3655 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
3335 3656 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
3336 3657 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
3337 3658 3.967467 ATCTACTCCCTCCGTTCCTAA 57.033 47.619 0.00 0.00 0.00 2.69
3338 3659 4.600547 TGATATCTACTCCCTCCGTTCCTA 59.399 45.833 3.98 0.00 0.00 2.94
3339 3660 3.398292 TGATATCTACTCCCTCCGTTCCT 59.602 47.826 3.98 0.00 0.00 3.36
3340 3661 3.759618 CTGATATCTACTCCCTCCGTTCC 59.240 52.174 3.98 0.00 0.00 3.62
3341 3662 3.191791 GCTGATATCTACTCCCTCCGTTC 59.808 52.174 3.98 0.00 0.00 3.95
3342 3663 3.158676 GCTGATATCTACTCCCTCCGTT 58.841 50.000 3.98 0.00 0.00 4.44
3343 3664 2.797786 GCTGATATCTACTCCCTCCGT 58.202 52.381 3.98 0.00 0.00 4.69
3344 3665 1.740585 CGCTGATATCTACTCCCTCCG 59.259 57.143 3.98 0.00 0.00 4.63
3345 3666 2.797786 ACGCTGATATCTACTCCCTCC 58.202 52.381 3.98 0.00 0.00 4.30
3346 3667 7.283580 ACATAATACGCTGATATCTACTCCCTC 59.716 40.741 3.98 0.00 0.00 4.30
3347 3668 7.120051 ACATAATACGCTGATATCTACTCCCT 58.880 38.462 3.98 0.00 0.00 4.20
3348 3669 7.067129 TGACATAATACGCTGATATCTACTCCC 59.933 40.741 3.98 0.00 0.00 4.30
3349 3670 7.986562 TGACATAATACGCTGATATCTACTCC 58.013 38.462 3.98 0.00 0.00 3.85
3350 3671 9.841880 TTTGACATAATACGCTGATATCTACTC 57.158 33.333 3.98 0.00 0.00 2.59
3377 3698 4.081031 GGAATCTCGGAGGGAGTACTTTTT 60.081 45.833 4.96 0.00 43.60 1.94
3378 3699 3.451540 GGAATCTCGGAGGGAGTACTTTT 59.548 47.826 4.96 0.00 43.60 2.27
3379 3700 3.032459 GGAATCTCGGAGGGAGTACTTT 58.968 50.000 4.96 0.00 43.60 2.66
3380 3701 2.024273 TGGAATCTCGGAGGGAGTACTT 60.024 50.000 4.96 0.00 43.60 2.24
3381 3702 1.569548 TGGAATCTCGGAGGGAGTACT 59.430 52.381 4.96 0.00 43.60 2.73
3382 3703 1.957877 CTGGAATCTCGGAGGGAGTAC 59.042 57.143 4.96 0.00 43.60 2.73
3383 3704 1.754555 GCTGGAATCTCGGAGGGAGTA 60.755 57.143 4.96 0.00 43.60 2.59
3384 3705 1.045911 GCTGGAATCTCGGAGGGAGT 61.046 60.000 4.96 0.00 43.60 3.85
3385 3706 1.745264 GCTGGAATCTCGGAGGGAG 59.255 63.158 4.96 0.00 44.58 4.30
3386 3707 2.127869 CGCTGGAATCTCGGAGGGA 61.128 63.158 4.96 0.00 0.00 4.20
3387 3708 2.419198 CGCTGGAATCTCGGAGGG 59.581 66.667 4.96 0.00 0.00 4.30
3388 3709 1.227089 CACGCTGGAATCTCGGAGG 60.227 63.158 4.96 0.00 0.00 4.30
3389 3710 0.526524 GACACGCTGGAATCTCGGAG 60.527 60.000 0.00 0.00 0.00 4.63
3390 3711 1.248101 TGACACGCTGGAATCTCGGA 61.248 55.000 0.00 0.00 0.00 4.55
3391 3712 1.078759 GTGACACGCTGGAATCTCGG 61.079 60.000 0.00 0.00 0.00 4.63
3392 3713 1.078759 GGTGACACGCTGGAATCTCG 61.079 60.000 0.00 0.00 0.00 4.04
3393 3714 0.741221 GGGTGACACGCTGGAATCTC 60.741 60.000 14.95 0.00 0.00 2.75
3394 3715 1.296715 GGGTGACACGCTGGAATCT 59.703 57.895 14.95 0.00 0.00 2.40
3395 3716 0.392998 ATGGGTGACACGCTGGAATC 60.393 55.000 21.65 0.00 31.67 2.52
3396 3717 0.038166 AATGGGTGACACGCTGGAAT 59.962 50.000 21.65 5.88 31.67 3.01
3397 3718 0.179004 AAATGGGTGACACGCTGGAA 60.179 50.000 21.65 3.73 31.67 3.53
3398 3719 0.179004 AAAATGGGTGACACGCTGGA 60.179 50.000 21.65 4.08 31.67 3.86
3399 3720 0.039256 CAAAATGGGTGACACGCTGG 60.039 55.000 21.65 5.07 31.67 4.85
3400 3721 0.667993 ACAAAATGGGTGACACGCTG 59.332 50.000 21.65 14.31 31.67 5.18
3401 3722 1.398692 AACAAAATGGGTGACACGCT 58.601 45.000 21.65 6.51 31.67 5.07
3402 3723 3.957383 AACAAAATGGGTGACACGC 57.043 47.368 15.33 15.33 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.