Multiple sequence alignment - TraesCS6A01G136300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G136300 chr6A 100.000 9385 0 0 1 9385 107500498 107509882 0.000000e+00 17331.0
1 TraesCS6A01G136300 chr6A 83.028 2457 257 64 6106 8433 107365826 107368251 0.000000e+00 2080.0
2 TraesCS6A01G136300 chr6A 85.749 821 91 15 4580 5383 107365017 107365828 0.000000e+00 845.0
3 TraesCS6A01G136300 chr6A 86.139 404 50 5 5705 6105 107505883 107506283 1.870000e-116 431.0
4 TraesCS6A01G136300 chr6A 86.139 404 50 5 5386 5786 107506202 107506602 1.870000e-116 431.0
5 TraesCS6A01G136300 chr6A 89.894 188 15 2 8465 8648 107369505 107369692 1.220000e-58 239.0
6 TraesCS6A01G136300 chr6A 88.889 117 9 4 9024 9140 107369689 107369801 3.530000e-29 141.0
7 TraesCS6A01G136300 chr6A 86.567 67 6 1 8834 8900 14350990 14351053 4.700000e-08 71.3
8 TraesCS6A01G136300 chr6A 88.525 61 4 2 8840 8900 605337425 605337368 4.700000e-08 71.3
9 TraesCS6A01G136300 chr6D 96.784 3047 72 10 5840 8878 89246152 89249180 0.000000e+00 5060.0
10 TraesCS6A01G136300 chr6D 94.342 1838 79 7 2749 4581 89233555 89235372 0.000000e+00 2795.0
11 TraesCS6A01G136300 chr6D 92.532 1781 113 8 1 1774 89230837 89232604 0.000000e+00 2534.0
12 TraesCS6A01G136300 chr6D 94.805 1232 53 7 4580 5807 89244928 89246152 0.000000e+00 1910.0
13 TraesCS6A01G136300 chr6D 84.586 1596 170 37 7237 8780 89209529 89211100 0.000000e+00 1515.0
14 TraesCS6A01G136300 chr6D 96.145 415 7 3 8971 9385 89249181 89249586 0.000000e+00 669.0
15 TraesCS6A01G136300 chr6D 94.550 422 22 1 2204 2625 89233136 89233556 0.000000e+00 651.0
16 TraesCS6A01G136300 chr6D 83.284 676 68 19 6106 6742 89208174 89208843 1.760000e-161 580.0
17 TraesCS6A01G136300 chr6D 91.190 420 23 7 1800 2218 89232670 89233076 8.230000e-155 558.0
18 TraesCS6A01G136300 chr6D 84.524 504 58 11 6761 7259 89209034 89209522 1.830000e-131 481.0
19 TraesCS6A01G136300 chr6D 85.714 154 13 3 9232 9385 89213131 89213275 4.540000e-33 154.0
20 TraesCS6A01G136300 chr6D 92.593 54 1 1 8849 8902 24823406 24823356 3.630000e-09 75.0
21 TraesCS6A01G136300 chr6D 88.525 61 4 1 8840 8900 65053179 65053122 4.700000e-08 71.3
22 TraesCS6A01G136300 chr6D 92.105 38 3 0 8843 8880 263008802 263008839 5.000000e-03 54.7
23 TraesCS6A01G136300 chr6B 95.166 2772 91 16 5626 8381 171452446 171455190 0.000000e+00 4337.0
24 TraesCS6A01G136300 chr6B 94.641 1157 52 5 2749 3898 171432971 171434124 0.000000e+00 1784.0
25 TraesCS6A01G136300 chr6B 91.181 1270 79 16 1362 2625 171431730 171432972 0.000000e+00 1694.0
26 TraesCS6A01G136300 chr6B 95.064 1013 44 4 4580 5591 171451439 171452446 0.000000e+00 1589.0
27 TraesCS6A01G136300 chr6B 84.563 1464 159 29 7237 8648 171410208 171411656 0.000000e+00 1389.0
28 TraesCS6A01G136300 chr6B 84.290 1394 152 28 7237 8579 171370552 171371929 0.000000e+00 1299.0
29 TraesCS6A01G136300 chr6B 82.756 1212 129 34 6106 7259 171369356 171370545 0.000000e+00 1007.0
30 TraesCS6A01G136300 chr6B 93.816 663 40 1 3920 4581 171434106 171434768 0.000000e+00 996.0
31 TraesCS6A01G136300 chr6B 85.746 891 106 8 1 870 171423044 171423934 0.000000e+00 922.0
32 TraesCS6A01G136300 chr6B 82.435 1076 112 31 6241 7259 171409146 171410201 0.000000e+00 869.0
33 TraesCS6A01G136300 chr6B 98.566 488 7 0 8391 8878 171460235 171460722 0.000000e+00 863.0
34 TraesCS6A01G136300 chr6B 85.399 815 96 12 4583 5383 171399463 171400268 0.000000e+00 824.0
35 TraesCS6A01G136300 chr6B 85.276 815 97 12 4583 5383 171358173 171358978 0.000000e+00 819.0
36 TraesCS6A01G136300 chr6B 95.663 415 10 2 8971 9385 171460723 171461129 0.000000e+00 660.0
37 TraesCS6A01G136300 chr6B 85.714 497 53 11 871 1349 171428467 171428963 8.410000e-140 508.0
38 TraesCS6A01G136300 chr6B 85.044 341 46 4 5400 5737 171452529 171452867 9.020000e-90 342.0
39 TraesCS6A01G136300 chr6B 83.978 362 43 9 5022 5383 171369012 171369358 5.430000e-87 333.0
40 TraesCS6A01G136300 chr6B 87.500 232 22 1 9154 9385 171411885 171412109 2.600000e-65 261.0
41 TraesCS6A01G136300 chr6B 91.837 147 10 2 2613 2759 439380598 439380742 4.440000e-48 204.0
42 TraesCS6A01G136300 chr6B 87.500 144 17 1 6106 6249 171358976 171359118 2.100000e-36 165.0
43 TraesCS6A01G136300 chr6B 87.500 144 17 1 6106 6249 171400266 171400408 2.100000e-36 165.0
44 TraesCS6A01G136300 chr6B 90.164 61 3 1 8840 8900 139885292 139885235 1.010000e-09 76.8
45 TraesCS6A01G136300 chr2B 85.201 723 88 6 5705 6411 428803691 428804410 0.000000e+00 725.0
46 TraesCS6A01G136300 chr2B 93.617 141 8 1 2622 2761 9859894 9859754 9.550000e-50 209.0
47 TraesCS6A01G136300 chr3D 82.740 562 74 13 5472 6025 199208392 199208938 6.590000e-131 479.0
48 TraesCS6A01G136300 chr3D 92.414 145 10 1 2615 2758 11338061 11337917 1.240000e-48 206.0
49 TraesCS6A01G136300 chr3D 100.000 28 0 0 8916 8943 67062446 67062419 1.700000e-02 52.8
50 TraesCS6A01G136300 chr2D 88.401 319 30 4 5789 6106 305910588 305910900 2.470000e-100 377.0
51 TraesCS6A01G136300 chr2D 91.379 58 2 1 8843 8900 579535266 579535320 1.010000e-09 76.8
52 TraesCS6A01G136300 chr4B 88.254 315 32 2 5789 6102 607282417 607282727 1.150000e-98 372.0
53 TraesCS6A01G136300 chr4B 81.707 82 11 2 8819 8900 19727497 19727420 2.190000e-06 65.8
54 TraesCS6A01G136300 chr1A 88.013 317 34 1 5790 6106 208893894 208894206 1.150000e-98 372.0
55 TraesCS6A01G136300 chr1A 85.489 317 38 5 5473 5786 208893894 208894205 3.270000e-84 324.0
56 TraesCS6A01G136300 chr1A 93.258 89 5 1 5385 5473 208884130 208884043 7.650000e-26 130.0
57 TraesCS6A01G136300 chr1A 90.164 61 3 1 8840 8900 27362019 27361962 1.010000e-09 76.8
58 TraesCS6A01G136300 chr2A 88.217 314 30 4 5789 6101 522519012 522518705 1.490000e-97 368.0
59 TraesCS6A01G136300 chr2A 86.997 323 36 3 5789 6110 13020497 13020814 8.960000e-95 359.0
60 TraesCS6A01G136300 chr2A 85.714 315 34 8 5472 5782 522519012 522518705 1.180000e-83 322.0
61 TraesCS6A01G136300 chr2A 79.775 89 14 3 8899 8984 764701160 764701073 2.830000e-05 62.1
62 TraesCS6A01G136300 chr5A 86.913 298 32 7 5493 5786 318831027 318830733 2.530000e-85 327.0
63 TraesCS6A01G136300 chr5A 89.172 157 16 1 2623 2778 399299466 399299310 2.670000e-45 195.0
64 TraesCS6A01G136300 chr5A 91.011 89 7 1 5385 5473 438145384 438145297 1.660000e-22 119.0
65 TraesCS6A01G136300 chr5A 92.063 63 2 1 8840 8902 387927538 387927479 1.680000e-12 86.1
66 TraesCS6A01G136300 chr1D 86.622 299 32 7 5493 5786 180854724 180855019 3.270000e-84 324.0
67 TraesCS6A01G136300 chr1D 90.164 61 3 1 8840 8900 298568633 298568576 1.010000e-09 76.8
68 TraesCS6A01G136300 chr1D 88.525 61 4 1 8840 8900 141705984 141706041 4.700000e-08 71.3
69 TraesCS6A01G136300 chr1D 100.000 32 0 0 8849 8880 60405130 60405099 1.020000e-04 60.2
70 TraesCS6A01G136300 chr4D 84.906 318 38 7 5472 5786 304305045 304304735 7.080000e-81 313.0
71 TraesCS6A01G136300 chr4D 91.011 89 7 1 5385 5473 502760761 502760674 1.660000e-22 119.0
72 TraesCS6A01G136300 chr4D 82.927 82 10 2 8819 8900 10243420 10243343 4.700000e-08 71.3
73 TraesCS6A01G136300 chr4D 85.000 60 9 0 8824 8883 231221787 231221846 2.830000e-05 62.1
74 TraesCS6A01G136300 chr7B 97.692 130 3 0 2622 2751 133486968 133487097 3.410000e-54 224.0
75 TraesCS6A01G136300 chr7B 88.095 84 9 1 8898 8981 641326265 641326183 2.160000e-16 99.0
76 TraesCS6A01G136300 chr3A 96.350 137 4 1 2617 2752 28447542 28447406 3.410000e-54 224.0
77 TraesCS6A01G136300 chr5B 93.478 138 9 0 2624 2761 468837100 468836963 1.240000e-48 206.0
78 TraesCS6A01G136300 chr5B 94.656 131 7 0 2622 2752 224325664 224325534 4.440000e-48 204.0
79 TraesCS6A01G136300 chr5B 92.391 92 6 1 8898 8989 185218428 185218518 7.650000e-26 130.0
80 TraesCS6A01G136300 chr5B 92.135 89 6 1 5385 5473 575816152 575816065 3.560000e-24 124.0
81 TraesCS6A01G136300 chr3B 92.908 141 9 1 2623 2763 173379142 173379003 4.440000e-48 204.0
82 TraesCS6A01G136300 chr3B 93.023 86 5 1 5386 5471 342869638 342869722 3.560000e-24 124.0
83 TraesCS6A01G136300 chr3B 88.333 60 6 1 8929 8988 736323849 736323907 4.700000e-08 71.3
84 TraesCS6A01G136300 chr7D 95.181 83 4 0 8899 8981 6744881 6744963 2.130000e-26 132.0
85 TraesCS6A01G136300 chr7D 89.744 78 6 2 8904 8980 577847860 577847784 2.160000e-16 99.0
86 TraesCS6A01G136300 chr7D 91.379 58 5 0 8923 8980 475727541 475727484 7.810000e-11 80.5
87 TraesCS6A01G136300 chr7D 90.164 61 3 1 8840 8900 165657869 165657926 1.010000e-09 76.8
88 TraesCS6A01G136300 chr7D 93.023 43 3 0 8897 8939 458524011 458524053 7.870000e-06 63.9
89 TraesCS6A01G136300 chr5D 93.443 61 1 1 8840 8900 294637748 294637691 4.670000e-13 87.9
90 TraesCS6A01G136300 chr5D 91.803 61 2 1 8840 8900 294637680 294637737 2.170000e-11 82.4
91 TraesCS6A01G136300 chr5D 85.526 76 11 0 8898 8973 449506435 449506510 7.810000e-11 80.5
92 TraesCS6A01G136300 chr5D 89.831 59 4 1 8840 8898 371786374 371786430 3.630000e-09 75.0
93 TraesCS6A01G136300 chr5D 87.500 64 8 0 8918 8981 449506514 449506577 3.630000e-09 75.0
94 TraesCS6A01G136300 chrUn 88.462 52 3 1 8849 8900 288819381 288819333 1.020000e-04 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G136300 chr6A 107500498 107509882 9384 False 6064.333333 17331 90.759333 1 9385 3 chr6A.!!$F3 9384
1 TraesCS6A01G136300 chr6A 107365017 107369801 4784 False 826.250000 2080 86.890000 4580 9140 4 chr6A.!!$F2 4560
2 TraesCS6A01G136300 chr6D 89244928 89249586 4658 False 2546.333333 5060 95.911333 4580 9385 3 chr6D.!!$F4 4805
3 TraesCS6A01G136300 chr6D 89230837 89235372 4535 False 1634.500000 2795 93.153500 1 4581 4 chr6D.!!$F3 4580
4 TraesCS6A01G136300 chr6D 89208174 89213275 5101 False 682.500000 1515 84.527000 6106 9385 4 chr6D.!!$F2 3279
5 TraesCS6A01G136300 chr6B 171451439 171455190 3751 False 2089.333333 4337 91.758000 4580 8381 3 chr6B.!!$F8 3801
6 TraesCS6A01G136300 chr6B 171428467 171434768 6301 False 1245.500000 1784 91.338000 871 4581 4 chr6B.!!$F7 3710
7 TraesCS6A01G136300 chr6B 171423044 171423934 890 False 922.000000 922 85.746000 1 870 1 chr6B.!!$F1 869
8 TraesCS6A01G136300 chr6B 171369012 171371929 2917 False 879.666667 1299 83.674667 5022 8579 3 chr6B.!!$F4 3557
9 TraesCS6A01G136300 chr6B 171409146 171412109 2963 False 839.666667 1389 84.832667 6241 9385 3 chr6B.!!$F6 3144
10 TraesCS6A01G136300 chr6B 171460235 171461129 894 False 761.500000 863 97.114500 8391 9385 2 chr6B.!!$F9 994
11 TraesCS6A01G136300 chr6B 171399463 171400408 945 False 494.500000 824 86.449500 4583 6249 2 chr6B.!!$F5 1666
12 TraesCS6A01G136300 chr6B 171358173 171359118 945 False 492.000000 819 86.388000 4583 6249 2 chr6B.!!$F3 1666
13 TraesCS6A01G136300 chr2B 428803691 428804410 719 False 725.000000 725 85.201000 5705 6411 1 chr2B.!!$F1 706
14 TraesCS6A01G136300 chr3D 199208392 199208938 546 False 479.000000 479 82.740000 5472 6025 1 chr3D.!!$F1 553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 272 0.041576 GTGGTCGGCGAAACAAGTTC 60.042 55.000 12.92 0.00 0.00 3.01 F
1220 1250 0.320596 ACGACGACTCCTTCTCGACT 60.321 55.000 0.00 0.00 35.08 4.18 F
1785 4583 0.624785 ACTAGTACTGGTCTCGGGCT 59.375 55.000 5.98 0.00 0.00 5.19 F
2270 5183 1.329599 GAACCGCCATAATCGTTGGAC 59.670 52.381 0.00 0.00 36.26 4.02 F
2746 5659 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
3831 6751 0.257039 GGGTTCATGTGGCCATCTCT 59.743 55.000 9.72 0.00 0.00 3.10 F
3911 6831 0.322546 ATTTGACCTTCGTGGGGAGC 60.323 55.000 2.69 0.00 41.11 4.70 F
4263 7183 0.600255 CGACAGAGAACGGCCAGTTT 60.600 55.000 13.03 0.00 44.35 2.66 F
4434 7354 0.678048 GATGCCAAGTCCACCCAGAC 60.678 60.000 0.00 0.00 37.01 3.51 F
5416 8361 0.771127 TATGTGGATTGCCTAGGCCC 59.229 55.000 30.81 23.85 41.09 5.80 F
6066 9019 0.821711 TGGCCCTTTTCACCAGTTCG 60.822 55.000 0.00 0.00 0.00 3.95 F
6708 9713 1.001293 GACCATGACTCAGCTCACACA 59.999 52.381 0.00 0.00 0.00 3.72 F
7155 10344 1.880340 CGAGTCATTCTGCCGAGGC 60.880 63.158 7.26 7.26 42.35 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1782 4580 0.324275 TGCCAATTACCCCTGAAGCC 60.324 55.000 0.00 0.00 0.00 4.35 R
2727 5640 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12 R
2731 5644 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13 R
4238 7158 0.039437 GCCGTTCTCTGTCGTTCTCA 60.039 55.000 0.00 0.00 0.00 3.27 R
4407 7327 0.107459 GGACTTGGCATCCCTGACTC 60.107 60.000 0.00 0.00 0.00 3.36 R
5692 8640 0.764890 CTTCAACACCCCCTCTCACA 59.235 55.000 0.00 0.00 0.00 3.58 R
5726 8675 2.293170 GAACTGATGGAAAGGGCTAGC 58.707 52.381 6.04 6.04 0.00 3.42 R
6066 9019 0.874175 GCCAACGCAACCAAAAGTCC 60.874 55.000 0.00 0.00 34.03 3.85 R
6220 9174 4.503910 TGTCTCCATTGTCAGGTTTATCG 58.496 43.478 0.00 0.00 0.00 2.92 R
6848 10028 0.950555 CCCAGTGATGTGTGTCGTGG 60.951 60.000 0.00 0.00 0.00 4.94 R
8015 11252 0.904394 TTCCGGTAAACTACCCGGCT 60.904 55.000 12.12 0.00 46.27 5.52 R
8193 11450 7.805071 CACATGACAAAACAGAAGGATAAGAAC 59.195 37.037 0.00 0.00 0.00 3.01 R
8878 13370 0.533308 TAAGACGTTTTGGCGGCAGT 60.533 50.000 12.87 6.52 43.41 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 97 6.795098 TTGATTTGTACATGTTAGCGACTT 57.205 33.333 2.30 0.00 0.00 3.01
92 98 6.795098 TGATTTGTACATGTTAGCGACTTT 57.205 33.333 2.30 0.00 0.00 2.66
187 194 2.529744 GCCGCCCTATCTTCCCCAT 61.530 63.158 0.00 0.00 0.00 4.00
244 251 1.686325 GGCGCCTCCCTGTCTCATAA 61.686 60.000 22.15 0.00 0.00 1.90
265 272 0.041576 GTGGTCGGCGAAACAAGTTC 60.042 55.000 12.92 0.00 0.00 3.01
299 306 3.120304 CGAGGTCTATGATTACGATGCGA 60.120 47.826 0.00 0.00 0.00 5.10
325 339 1.612146 TTGGGAGGGCAGATGTCGA 60.612 57.895 0.00 0.00 0.00 4.20
351 365 2.261361 GCGGTTGGTTTGGGATGC 59.739 61.111 0.00 0.00 0.00 3.91
352 366 2.569354 GCGGTTGGTTTGGGATGCA 61.569 57.895 0.00 0.00 0.00 3.96
364 378 1.470996 GGGATGCAACAGTGGCCAAA 61.471 55.000 7.24 0.00 0.00 3.28
445 459 2.139118 GTTGCAACTCGCTCTTCTTCT 58.861 47.619 22.36 0.00 43.06 2.85
456 476 0.603707 TCTTCTTCTGTGCAAGGCGG 60.604 55.000 0.00 0.00 0.00 6.13
464 484 4.081185 TGCAAGGCGGCGATCTCA 62.081 61.111 12.98 0.00 36.28 3.27
505 525 3.821055 GAGCTCGCCGCAGTCTCT 61.821 66.667 0.00 0.00 42.61 3.10
507 527 3.184683 GCTCGCCGCAGTCTCTTG 61.185 66.667 0.00 0.00 38.92 3.02
514 534 1.606737 GCCGCAGTCTCTTGTCTCTTT 60.607 52.381 0.00 0.00 0.00 2.52
537 557 1.282875 GTGTTGGGAAGCTCGTTGC 59.717 57.895 0.00 0.00 43.29 4.17
551 571 1.444553 GTTGCCGTCTCACTCCTCG 60.445 63.158 0.00 0.00 0.00 4.63
616 636 0.544697 GGCGAAATCCTAGTTGGGGA 59.455 55.000 0.00 0.00 37.26 4.81
640 661 3.054728 TCCTATTCAACCTTGCGGATTGA 60.055 43.478 0.00 0.00 32.33 2.57
659 680 2.285024 GGGCCTTCAAATGCTGCCA 61.285 57.895 0.84 0.00 43.96 4.92
735 756 4.655649 TCAGTCATGGAAGCATATGTAGGT 59.344 41.667 4.29 0.00 0.00 3.08
817 840 1.061905 ATCCCATCAGCCCATTCCGA 61.062 55.000 0.00 0.00 0.00 4.55
828 851 1.679032 CCCATTCCGACCCTCTTGTTC 60.679 57.143 0.00 0.00 0.00 3.18
865 888 5.247337 TGCACATCCTCATCGGGTATTTATA 59.753 40.000 0.00 0.00 0.00 0.98
881 904 7.287810 GGTATTTATAGGTGGGTTGTCTTGAT 58.712 38.462 0.00 0.00 0.00 2.57
885 908 0.404040 GGTGGGTTGTCTTGATCCCA 59.596 55.000 0.00 0.00 46.34 4.37
887 910 2.512692 TGGGTTGTCTTGATCCCATG 57.487 50.000 0.00 0.00 44.07 3.66
926 950 5.367945 TCTAGGTTTGTCCTCACACTTTT 57.632 39.130 0.00 0.00 44.42 2.27
960 984 7.499232 CACCACTTTTCTTCTTCTCTTTTCCTA 59.501 37.037 0.00 0.00 0.00 2.94
1032 1062 1.899814 TGTGGTCCGTTCTCTAAGCAT 59.100 47.619 0.00 0.00 0.00 3.79
1060 1090 2.317609 GGCAAGCTTCGCTTCGACA 61.318 57.895 16.77 0.00 46.77 4.35
1096 1126 7.492524 AGATTTATCAGATCTAGTTCGCAACA 58.507 34.615 0.00 0.00 32.27 3.33
1105 1135 4.439057 TCTAGTTCGCAACAAAGTTGAGT 58.561 39.130 13.58 0.00 0.00 3.41
1131 1161 1.537202 CCGAAGTTTCAAAGGGAGCAG 59.463 52.381 0.00 0.00 0.00 4.24
1140 1170 3.454858 TCAAAGGGAGCAGGAAGAGTAT 58.545 45.455 0.00 0.00 0.00 2.12
1143 1173 3.121929 AGGGAGCAGGAAGAGTATGAA 57.878 47.619 0.00 0.00 0.00 2.57
1220 1250 0.320596 ACGACGACTCCTTCTCGACT 60.321 55.000 0.00 0.00 35.08 4.18
1228 1258 3.691575 ACTCCTTCTCGACTTCATCAGA 58.308 45.455 0.00 0.00 0.00 3.27
1286 1316 0.731417 CGTGACGACGGGTTCTCTAT 59.269 55.000 0.00 0.00 42.18 1.98
1290 1320 2.422479 TGACGACGGGTTCTCTATCTTG 59.578 50.000 0.00 0.00 0.00 3.02
1312 1348 4.466370 TGAACGACAACCCTAGATCTGAAT 59.534 41.667 5.18 0.00 0.00 2.57
1338 1377 6.611613 AGATTGAACTACATCAACTCCTCA 57.388 37.500 0.00 0.00 41.78 3.86
1619 4415 4.509737 GGTGAGCCCCTCGTACGC 62.510 72.222 11.24 0.00 32.35 4.42
1626 4422 1.208776 AGCCCCTCGTACGCTAATTTT 59.791 47.619 11.24 0.00 0.00 1.82
1641 4437 7.390027 ACGCTAATTTTATCCTCTAGATGCAT 58.610 34.615 0.00 0.00 36.33 3.96
1643 4439 7.332926 CGCTAATTTTATCCTCTAGATGCATGT 59.667 37.037 2.46 1.37 36.33 3.21
1658 4454 2.233676 TGCATGTTCATGGACGTCTAGT 59.766 45.455 16.46 0.00 0.00 2.57
1700 4496 5.041287 CGCTACGATTACTTCAGGAATTCA 58.959 41.667 7.93 0.00 0.00 2.57
1703 4499 6.019479 GCTACGATTACTTCAGGAATTCACAG 60.019 42.308 7.93 0.00 0.00 3.66
1712 4508 3.136763 CAGGAATTCACAGGATCCGATG 58.863 50.000 5.98 9.03 37.05 3.84
1780 4578 2.015587 CCCACGACTAGTACTGGTCTC 58.984 57.143 29.65 11.83 38.70 3.36
1781 4579 1.664659 CCACGACTAGTACTGGTCTCG 59.335 57.143 29.65 22.76 38.70 4.04
1782 4580 1.664659 CACGACTAGTACTGGTCTCGG 59.335 57.143 29.65 19.79 38.70 4.63
1783 4581 1.297664 CGACTAGTACTGGTCTCGGG 58.702 60.000 29.65 15.24 38.70 5.14
1784 4582 1.023502 GACTAGTACTGGTCTCGGGC 58.976 60.000 26.97 5.11 37.97 6.13
1785 4583 0.624785 ACTAGTACTGGTCTCGGGCT 59.375 55.000 5.98 0.00 0.00 5.19
1823 4661 3.195825 ACAGGCCACTAACATCTGACTAC 59.804 47.826 5.01 0.00 0.00 2.73
1824 4662 3.449018 CAGGCCACTAACATCTGACTACT 59.551 47.826 5.01 0.00 0.00 2.57
1825 4663 4.645136 CAGGCCACTAACATCTGACTACTA 59.355 45.833 5.01 0.00 0.00 1.82
1903 4741 6.644347 CAGTTTCTTGGATACTGGAGTACAT 58.356 40.000 9.25 0.00 37.75 2.29
1904 4742 6.536582 CAGTTTCTTGGATACTGGAGTACATG 59.463 42.308 9.25 0.00 37.75 3.21
1910 4748 4.827835 TGGATACTGGAGTACATGCTACTC 59.172 45.833 19.14 19.14 39.57 2.59
1932 4770 3.322254 CCTGTGCTCCGGATATCTTAGTT 59.678 47.826 3.57 0.00 0.00 2.24
1943 4781 9.599866 TCCGGATATCTTAGTTTGCATATAATG 57.400 33.333 0.00 0.00 0.00 1.90
2074 4912 7.217200 TCCAAATTGGTACTAGATATCTGTGC 58.783 38.462 15.79 13.42 39.03 4.57
2117 4955 5.125417 TGCACTTGGTAGATAAATTCTTGGC 59.875 40.000 0.00 0.00 35.79 4.52
2136 4975 2.294979 GCACTGCTCATGGATGATTGA 58.705 47.619 0.00 0.00 36.02 2.57
2178 5017 8.084684 TGAAAGTGAGGATATGATACATTCTCG 58.915 37.037 0.00 0.00 31.53 4.04
2270 5183 1.329599 GAACCGCCATAATCGTTGGAC 59.670 52.381 0.00 0.00 36.26 4.02
2299 5212 6.254804 CCGTCATGTTTGTATCGATCTTTACA 59.745 38.462 0.00 3.47 0.00 2.41
2341 5254 5.817616 CAATCTGTTGCATGAAACAAGAC 57.182 39.130 19.86 0.00 39.47 3.01
2344 5257 3.002246 TCTGTTGCATGAAACAAGACGAC 59.998 43.478 19.86 0.00 39.47 4.34
2345 5258 2.032799 TGTTGCATGAAACAAGACGACC 59.967 45.455 17.28 0.00 37.12 4.79
2349 5262 2.671396 GCATGAAACAAGACGACCGTAT 59.329 45.455 0.00 0.00 0.00 3.06
2369 5282 5.163834 CGTATAACCACTTAAATGCCGTGTT 60.164 40.000 0.00 0.00 0.00 3.32
2562 5475 5.009110 TCAACTTGGAACGCACATTGAAATA 59.991 36.000 0.00 0.00 0.00 1.40
2566 5479 7.771183 ACTTGGAACGCACATTGAAATAATAT 58.229 30.769 0.00 0.00 0.00 1.28
2602 5515 6.197364 AGTGCCATATCGCTCTAGTTATAC 57.803 41.667 0.00 0.00 31.09 1.47
2633 5546 6.812998 TCAAAACAGTATTATACTCCCTCCG 58.187 40.000 1.33 0.00 36.76 4.63
2634 5547 6.381994 TCAAAACAGTATTATACTCCCTCCGT 59.618 38.462 1.33 0.00 36.76 4.69
2635 5548 6.402456 AAACAGTATTATACTCCCTCCGTC 57.598 41.667 1.33 0.00 36.76 4.79
2636 5549 4.405548 ACAGTATTATACTCCCTCCGTCC 58.594 47.826 1.33 0.00 36.76 4.79
2637 5550 3.439476 CAGTATTATACTCCCTCCGTCCG 59.561 52.174 1.33 0.00 36.76 4.79
2638 5551 2.965671 ATTATACTCCCTCCGTCCGA 57.034 50.000 0.00 0.00 0.00 4.55
2639 5552 2.734755 TTATACTCCCTCCGTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
2640 5553 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
2641 5554 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
2642 5555 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
2643 5556 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2644 5557 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2645 5558 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2646 5559 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2647 5560 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2648 5561 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2649 5562 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2650 5563 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2651 5564 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2652 5565 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2653 5566 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2654 5567 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2655 5568 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2656 5569 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2657 5570 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2658 5571 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2659 5572 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2660 5573 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2661 5574 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
2668 5581 7.614494 ACTTGTCATCAAAATGGATAAAAGGG 58.386 34.615 0.00 0.00 33.42 3.95
2669 5582 6.543430 TGTCATCAAAATGGATAAAAGGGG 57.457 37.500 0.00 0.00 33.42 4.79
2670 5583 6.259893 TGTCATCAAAATGGATAAAAGGGGA 58.740 36.000 0.00 0.00 33.42 4.81
2671 5584 6.902416 TGTCATCAAAATGGATAAAAGGGGAT 59.098 34.615 0.00 0.00 33.42 3.85
2672 5585 7.147689 TGTCATCAAAATGGATAAAAGGGGATG 60.148 37.037 0.00 0.00 33.42 3.51
2673 5586 5.612725 TCAAAATGGATAAAAGGGGATGC 57.387 39.130 0.00 0.00 0.00 3.91
2674 5587 5.028802 TCAAAATGGATAAAAGGGGATGCA 58.971 37.500 0.00 0.00 0.00 3.96
2675 5588 5.666718 TCAAAATGGATAAAAGGGGATGCAT 59.333 36.000 0.00 0.00 35.84 3.96
2676 5589 5.813513 AAATGGATAAAAGGGGATGCATC 57.186 39.130 18.81 18.81 33.50 3.91
2677 5590 4.754411 ATGGATAAAAGGGGATGCATCT 57.246 40.909 25.28 7.83 29.02 2.90
2678 5591 5.865977 ATGGATAAAAGGGGATGCATCTA 57.134 39.130 25.28 9.84 29.02 1.98
2679 5592 5.246981 TGGATAAAAGGGGATGCATCTAG 57.753 43.478 25.28 0.00 0.00 2.43
2680 5593 4.913355 TGGATAAAAGGGGATGCATCTAGA 59.087 41.667 25.28 0.00 0.00 2.43
2681 5594 5.372363 TGGATAAAAGGGGATGCATCTAGAA 59.628 40.000 25.28 6.39 0.00 2.10
2682 5595 6.045931 TGGATAAAAGGGGATGCATCTAGAAT 59.954 38.462 25.28 10.52 0.00 2.40
2683 5596 6.950619 GGATAAAAGGGGATGCATCTAGAATT 59.049 38.462 25.28 16.72 0.00 2.17
2684 5597 8.109634 GGATAAAAGGGGATGCATCTAGAATTA 58.890 37.037 25.28 18.07 0.00 1.40
2685 5598 9.520515 GATAAAAGGGGATGCATCTAGAATTAA 57.479 33.333 25.28 6.86 0.00 1.40
2686 5599 9.881773 ATAAAAGGGGATGCATCTAGAATTAAA 57.118 29.630 25.28 5.55 0.00 1.52
2687 5600 8.608185 AAAAGGGGATGCATCTAGAATTAAAA 57.392 30.769 25.28 0.00 0.00 1.52
2688 5601 8.788238 AAAGGGGATGCATCTAGAATTAAAAT 57.212 30.769 25.28 0.00 0.00 1.82
2689 5602 9.881773 AAAGGGGATGCATCTAGAATTAAAATA 57.118 29.630 25.28 0.00 0.00 1.40
2690 5603 8.870075 AGGGGATGCATCTAGAATTAAAATAC 57.130 34.615 25.28 4.15 0.00 1.89
2691 5604 7.607991 AGGGGATGCATCTAGAATTAAAATACG 59.392 37.037 25.28 0.00 0.00 3.06
2692 5605 7.390718 GGGGATGCATCTAGAATTAAAATACGT 59.609 37.037 25.28 0.00 0.00 3.57
2693 5606 8.443937 GGGATGCATCTAGAATTAAAATACGTC 58.556 37.037 25.28 2.81 0.00 4.34
2694 5607 9.209175 GGATGCATCTAGAATTAAAATACGTCT 57.791 33.333 25.28 0.00 0.00 4.18
2711 5624 3.703420 CGTCTAGATACGTCCCCTTTTG 58.297 50.000 0.00 0.00 38.07 2.44
2712 5625 3.129988 CGTCTAGATACGTCCCCTTTTGT 59.870 47.826 0.00 0.00 38.07 2.83
2713 5626 4.381292 CGTCTAGATACGTCCCCTTTTGTT 60.381 45.833 0.00 0.00 38.07 2.83
2714 5627 5.107824 GTCTAGATACGTCCCCTTTTGTTC 58.892 45.833 0.00 0.00 0.00 3.18
2715 5628 4.773674 TCTAGATACGTCCCCTTTTGTTCA 59.226 41.667 0.00 0.00 0.00 3.18
2716 5629 4.569719 AGATACGTCCCCTTTTGTTCAT 57.430 40.909 0.00 0.00 0.00 2.57
2717 5630 4.918588 AGATACGTCCCCTTTTGTTCATT 58.081 39.130 0.00 0.00 0.00 2.57
2718 5631 5.321927 AGATACGTCCCCTTTTGTTCATTT 58.678 37.500 0.00 0.00 0.00 2.32
2719 5632 5.773176 AGATACGTCCCCTTTTGTTCATTTT 59.227 36.000 0.00 0.00 0.00 1.82
2720 5633 4.053469 ACGTCCCCTTTTGTTCATTTTG 57.947 40.909 0.00 0.00 0.00 2.44
2721 5634 3.702045 ACGTCCCCTTTTGTTCATTTTGA 59.298 39.130 0.00 0.00 0.00 2.69
2722 5635 4.343814 ACGTCCCCTTTTGTTCATTTTGAT 59.656 37.500 0.00 0.00 0.00 2.57
2723 5636 4.685628 CGTCCCCTTTTGTTCATTTTGATG 59.314 41.667 0.00 0.00 0.00 3.07
2724 5637 5.508825 CGTCCCCTTTTGTTCATTTTGATGA 60.509 40.000 0.00 0.00 0.00 2.92
2725 5638 5.696270 GTCCCCTTTTGTTCATTTTGATGAC 59.304 40.000 0.00 0.00 0.00 3.06
2726 5639 5.365025 TCCCCTTTTGTTCATTTTGATGACA 59.635 36.000 0.00 0.00 0.00 3.58
2727 5640 6.054295 CCCCTTTTGTTCATTTTGATGACAA 58.946 36.000 0.00 0.00 0.00 3.18
2728 5641 6.203338 CCCCTTTTGTTCATTTTGATGACAAG 59.797 38.462 0.00 0.00 37.32 3.16
2729 5642 6.762661 CCCTTTTGTTCATTTTGATGACAAGT 59.237 34.615 0.00 0.00 37.32 3.16
2730 5643 7.925483 CCCTTTTGTTCATTTTGATGACAAGTA 59.075 33.333 0.00 0.00 37.32 2.24
2731 5644 9.480053 CCTTTTGTTCATTTTGATGACAAGTAT 57.520 29.630 0.00 0.00 37.32 2.12
2735 5648 9.474920 TTGTTCATTTTGATGACAAGTATTTCC 57.525 29.630 0.00 0.00 37.32 3.13
2736 5649 7.807433 TGTTCATTTTGATGACAAGTATTTCCG 59.193 33.333 0.00 0.00 37.32 4.30
2737 5650 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
2738 5651 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
2739 5652 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2740 5653 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2741 5654 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2742 5655 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2743 5656 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2744 5657 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2745 5658 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2746 5659 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2747 5660 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2834 5747 6.543465 TGCCATTGAATTACTCTTGTCATAGG 59.457 38.462 0.00 0.00 0.00 2.57
2861 5774 7.385778 TGGATATTTGTCCTTCTAAAAACGG 57.614 36.000 0.00 0.00 39.12 4.44
2952 5865 1.170442 TGGCACATCATCACTTGCTG 58.830 50.000 0.00 0.00 35.24 4.41
2979 5893 9.968870 ATTTTGCAGCATTTGTTTCATAAAAAT 57.031 22.222 0.00 0.00 0.00 1.82
3010 5924 4.533815 TCCTGTGGAGTCTCGTACATATT 58.466 43.478 8.49 0.00 0.00 1.28
3018 5932 8.189460 GTGGAGTCTCGTACATATTCTTTTAGT 58.811 37.037 0.00 0.00 0.00 2.24
3051 5965 0.320050 TCATGTTGCTGTGCGTCCTA 59.680 50.000 0.00 0.00 0.00 2.94
3052 5966 0.723414 CATGTTGCTGTGCGTCCTAG 59.277 55.000 0.00 0.00 0.00 3.02
3053 5967 0.321671 ATGTTGCTGTGCGTCCTAGT 59.678 50.000 0.00 0.00 0.00 2.57
3072 5986 1.194121 TAGTGCTCCTTCTGCTGCCA 61.194 55.000 0.00 0.00 0.00 4.92
3183 6097 0.801067 ATTTAGTCGACGTCGCTGCC 60.801 55.000 32.19 18.69 39.60 4.85
3201 6115 1.944430 GCCGGTCAGAACGAAAGGATT 60.944 52.381 10.21 0.00 0.00 3.01
3239 6153 1.599047 CTGGAGTGGCACCTCGAAT 59.401 57.895 15.27 0.00 31.98 3.34
3277 6193 2.815589 GCTGGACTTGGATCCACTGTTT 60.816 50.000 15.91 0.00 44.14 2.83
3330 6246 0.745486 TGCTCCATCGGATGCTGTTG 60.745 55.000 12.54 0.00 30.89 3.33
3360 6276 2.094545 CAGTGATCACGACATGTCTCCA 60.095 50.000 22.95 10.49 36.20 3.86
3455 6374 3.431766 CCATAACTTGTAACTCGAGGGGG 60.432 52.174 18.41 3.22 32.04 5.40
3476 6395 4.651867 CTCACCATTGAGGGCAGG 57.348 61.111 0.00 0.00 45.06 4.85
3592 6511 2.758736 ATGCTTCAGAAGACGAGCTT 57.241 45.000 14.86 0.00 40.25 3.74
3593 6512 3.876274 ATGCTTCAGAAGACGAGCTTA 57.124 42.857 14.86 0.00 36.83 3.09
3761 6681 2.183811 CCTGCAGCGAGAGGACAG 59.816 66.667 8.66 0.00 0.00 3.51
3815 6735 0.471591 TGCAAAGGGAGCAAATGGGT 60.472 50.000 0.00 0.00 39.39 4.51
3831 6751 0.257039 GGGTTCATGTGGCCATCTCT 59.743 55.000 9.72 0.00 0.00 3.10
3837 6757 2.092753 TCATGTGGCCATCTCTTCCTTC 60.093 50.000 9.72 0.00 0.00 3.46
3878 6798 6.587608 CAGTTAGGCATTTTCCTTGAACATTC 59.412 38.462 0.00 0.00 37.66 2.67
3884 6804 4.320608 TTTTCCTTGAACATTCAGCCAC 57.679 40.909 0.00 0.00 38.61 5.01
3902 6822 3.981416 GCCACGAAAAGAATTTGACCTTC 59.019 43.478 0.00 0.00 39.02 3.46
3911 6831 0.322546 ATTTGACCTTCGTGGGGAGC 60.323 55.000 2.69 0.00 41.11 4.70
3919 6839 1.470098 CTTCGTGGGGAGCTTGATTTG 59.530 52.381 0.00 0.00 0.00 2.32
3956 6876 3.157087 GAGGGGAGAATCAACTTTGCAA 58.843 45.455 0.00 0.00 36.25 4.08
3962 6882 7.038088 AGGGGAGAATCAACTTTGCAAATAAAT 60.038 33.333 13.23 1.75 36.25 1.40
3976 6896 8.925161 TTGCAAATAAATTGAATAGTGTAGGC 57.075 30.769 0.00 0.00 41.85 3.93
4006 6926 8.624776 GCTGGCAGTATATTTCTTATTTTCAGT 58.375 33.333 17.16 0.00 0.00 3.41
4061 6981 3.586618 ACAGAGAGAAGGCAGAGGATTTT 59.413 43.478 0.00 0.00 0.00 1.82
4138 7058 7.320443 TGTGTGTAATCCATCTTTTATCAGC 57.680 36.000 0.00 0.00 0.00 4.26
4141 7061 6.543465 TGTGTAATCCATCTTTTATCAGCCAG 59.457 38.462 0.00 0.00 0.00 4.85
4163 7083 2.086869 CCATCCGCAACTGAGATGTTT 58.913 47.619 8.49 0.00 36.48 2.83
4172 7092 5.591099 GCAACTGAGATGTTTCTTTTCCAA 58.409 37.500 0.00 0.00 30.30 3.53
4234 7154 2.375146 GAGGCCATTTAACCCGTGATT 58.625 47.619 5.01 0.00 0.00 2.57
4238 7158 3.306433 GGCCATTTAACCCGTGATTGTTT 60.306 43.478 0.00 0.00 0.00 2.83
4239 7159 3.677596 GCCATTTAACCCGTGATTGTTTG 59.322 43.478 0.00 0.00 0.00 2.93
4249 7169 3.362986 CCGTGATTGTTTGAGAACGACAG 60.363 47.826 0.00 0.00 38.65 3.51
4263 7183 0.600255 CGACAGAGAACGGCCAGTTT 60.600 55.000 13.03 0.00 44.35 2.66
4277 7197 2.227388 GCCAGTTTCTGTGATGGAAGTG 59.773 50.000 0.00 0.00 34.60 3.16
4317 7237 2.224523 TTGACCTCCTTGTCACATGGAC 60.225 50.000 8.36 2.43 44.55 4.02
4345 7265 1.331214 CCATGCCAAGGTTTGTCTGT 58.669 50.000 0.00 0.00 0.00 3.41
4350 7270 0.944386 CCAAGGTTTGTCTGTGTCCG 59.056 55.000 0.00 0.00 0.00 4.79
4407 7327 2.437359 CCTTCCCTTGAGCAGCCG 60.437 66.667 0.00 0.00 0.00 5.52
4434 7354 0.678048 GATGCCAAGTCCACCCAGAC 60.678 60.000 0.00 0.00 37.01 3.51
4459 7379 1.549037 GGGCATACAAACTTGGGACCA 60.549 52.381 0.00 0.00 0.00 4.02
4475 7395 1.074775 CCAACACAGCAGGCCCTTA 59.925 57.895 0.00 0.00 0.00 2.69
4655 7575 4.585162 AGTTGAGAGAAGAAGAAAGGACGA 59.415 41.667 0.00 0.00 0.00 4.20
4697 7617 4.880696 ACCTAGGACGACTCATAGTAACAC 59.119 45.833 17.98 0.00 30.10 3.32
4719 7639 2.818432 GACTCACTTCTTCCTACGGTGA 59.182 50.000 0.00 0.00 35.90 4.02
4992 7934 3.659195 TCAATGCCAAGATGATATCCCCT 59.341 43.478 0.00 0.00 0.00 4.79
5073 8015 1.844687 AGAAGATTTGGCAAGCCTCC 58.155 50.000 12.96 0.00 36.94 4.30
5142 8084 2.157738 GCTGTCATGGTCTTGCTTTCT 58.842 47.619 0.00 0.00 0.00 2.52
5224 8166 9.336171 AGAATTAATTTCAGGAGCAGTATTCTC 57.664 33.333 1.43 0.00 36.75 2.87
5416 8361 0.771127 TATGTGGATTGCCTAGGCCC 59.229 55.000 30.81 23.85 41.09 5.80
5425 8370 0.918799 TGCCTAGGCCCTTCCATCAA 60.919 55.000 30.81 5.05 41.09 2.57
5438 8383 4.278419 CCTTCCATCAAGTTCGGACTTTTT 59.722 41.667 6.29 0.00 43.48 1.94
5442 8387 5.823570 TCCATCAAGTTCGGACTTTTTGTTA 59.176 36.000 6.29 0.00 43.48 2.41
5450 8395 3.004944 TCGGACTTTTTGTTATGTTGGCC 59.995 43.478 0.00 0.00 0.00 5.36
5509 8454 2.647683 AGCTAGCCCTTTCCATAAGC 57.352 50.000 12.13 0.00 0.00 3.09
5510 8455 1.143889 AGCTAGCCCTTTCCATAAGCC 59.856 52.381 12.13 0.00 0.00 4.35
5581 8528 3.486383 AGCCAAAGGTCTCGATTTCAAA 58.514 40.909 0.00 0.00 0.00 2.69
5583 8530 4.524328 AGCCAAAGGTCTCGATTTCAAATT 59.476 37.500 0.00 0.00 0.00 1.82
5593 8540 4.722194 TCGATTTCAAATTCTGGCTTTCG 58.278 39.130 0.00 0.00 0.00 3.46
5657 8604 2.967615 GCCGCTTGAGCCGTATCC 60.968 66.667 0.00 0.00 37.91 2.59
5666 8613 1.076192 AGCCGTATCCCCGAGTCTT 60.076 57.895 0.00 0.00 0.00 3.01
5668 8615 1.389609 GCCGTATCCCCGAGTCTTCA 61.390 60.000 0.00 0.00 0.00 3.02
5669 8616 1.329256 CCGTATCCCCGAGTCTTCAT 58.671 55.000 0.00 0.00 0.00 2.57
5674 8621 4.022242 CGTATCCCCGAGTCTTCATATGTT 60.022 45.833 1.90 0.00 0.00 2.71
5675 8622 3.819564 TCCCCGAGTCTTCATATGTTG 57.180 47.619 1.90 0.00 0.00 3.33
5676 8623 2.434336 TCCCCGAGTCTTCATATGTTGG 59.566 50.000 1.90 0.00 0.00 3.77
5677 8625 2.213499 CCCGAGTCTTCATATGTTGGC 58.787 52.381 1.90 0.00 0.00 4.52
5678 8626 2.419990 CCCGAGTCTTCATATGTTGGCA 60.420 50.000 1.90 0.00 0.00 4.92
5726 8675 6.183360 GGGTGTTGAAGTGTATATGTGGATTG 60.183 42.308 0.00 0.00 0.00 2.67
5764 8713 3.192633 AGTTCGGACTTTTTGCTGTGTTT 59.807 39.130 0.00 0.00 29.87 2.83
5811 8763 3.947196 TGTAAATGTGGATTGCCTAGCTG 59.053 43.478 0.00 0.00 34.31 4.24
5812 8764 3.370840 AAATGTGGATTGCCTAGCTGA 57.629 42.857 0.00 0.00 34.31 4.26
5863 8815 1.399791 GTTGGCTAGTGCATGAAGCTC 59.600 52.381 14.92 8.02 45.94 4.09
6048 9001 2.715046 AGTGTGTATGTGGATTGCCTG 58.285 47.619 0.00 0.00 34.31 4.85
6066 9019 0.821711 TGGCCCTTTTCACCAGTTCG 60.822 55.000 0.00 0.00 0.00 3.95
6350 9324 6.248569 AGGGGAGTTAATACGAACATCAAT 57.751 37.500 0.00 0.00 0.00 2.57
6504 9487 8.677300 GCAATAATTTTTGTCTCATCTCTACCA 58.323 33.333 9.87 0.00 0.00 3.25
6684 9689 4.031418 TGTCTTATCAATGCGCAATTGG 57.969 40.909 17.11 4.17 45.00 3.16
6708 9713 1.001293 GACCATGACTCAGCTCACACA 59.999 52.381 0.00 0.00 0.00 3.72
6786 9963 5.850557 AACCATTGACAACTCAACATTCA 57.149 34.783 0.00 0.00 39.28 2.57
6848 10028 2.533266 TGTGAGCCTGTTGAGAAGAC 57.467 50.000 0.00 0.00 0.00 3.01
6978 10167 2.431771 TCGTGTCGCCGATGTTGG 60.432 61.111 0.00 0.00 30.63 3.77
7046 10235 2.430465 TGCAGCCTTTCAAGTCAGATC 58.570 47.619 0.00 0.00 0.00 2.75
7048 10237 3.080319 GCAGCCTTTCAAGTCAGATCTT 58.920 45.455 0.00 0.00 0.00 2.40
7155 10344 1.880340 CGAGTCATTCTGCCGAGGC 60.880 63.158 7.26 7.26 42.35 4.70
7271 10488 5.801350 ATCAACACTTGGTCATATTCGTG 57.199 39.130 0.00 0.00 0.00 4.35
7286 10503 7.543172 GTCATATTCGTGTAGTTAGTTTGGTCA 59.457 37.037 0.00 0.00 0.00 4.02
7378 10596 3.782656 TGTCCTACCAAACTTCTTCCC 57.217 47.619 0.00 0.00 0.00 3.97
7755 10982 7.815840 TTCAAACTGAGAATTTGGTATCACA 57.184 32.000 0.00 0.00 37.59 3.58
7932 11169 6.278363 GCATAATCCGAGTGTCTAAGGTTTA 58.722 40.000 0.00 0.00 0.00 2.01
7933 11170 6.759827 GCATAATCCGAGTGTCTAAGGTTTAA 59.240 38.462 0.00 0.00 0.00 1.52
7939 11176 9.729281 ATCCGAGTGTCTAAGGTTTAATTTTTA 57.271 29.630 0.00 0.00 0.00 1.52
8193 11450 1.535462 CTTGTTTGAGTTAGGGTGCCG 59.465 52.381 0.00 0.00 0.00 5.69
8323 11585 5.298777 GTGCCAGAATTAGAGATGCTGAAAT 59.701 40.000 0.00 0.00 0.00 2.17
8381 11643 3.628032 GGAGTAAAATACTGGAAGCTGGC 59.372 47.826 0.00 0.00 39.59 4.85
8384 11646 3.439857 AAAATACTGGAAGCTGGCTGA 57.560 42.857 0.00 0.00 37.60 4.26
8714 13202 6.911308 AGTTACCCCATCTGCTATTTAATGT 58.089 36.000 0.00 0.00 0.00 2.71
8793 13285 4.202398 TGCTGCCATGTTTGGGAAATTTAA 60.202 37.500 0.00 0.00 43.55 1.52
8794 13286 4.392754 GCTGCCATGTTTGGGAAATTTAAG 59.607 41.667 0.00 0.00 43.55 1.85
8837 13329 5.929697 GCATAATGCTATGAAGTGCTACA 57.070 39.130 0.00 0.00 40.96 2.74
8878 13370 8.705048 AAGACGTTTTGGCAGTTTAAATTAAA 57.295 26.923 0.00 0.00 0.00 1.52
8879 13371 8.122306 AGACGTTTTGGCAGTTTAAATTAAAC 57.878 30.769 18.07 18.07 46.36 2.01
8889 13381 5.908916 GTTTAAATTAAACTGCCGCCAAA 57.091 34.783 18.36 0.00 43.50 3.28
8890 13382 6.288426 GTTTAAATTAAACTGCCGCCAAAA 57.712 33.333 18.36 0.00 43.50 2.44
8891 13383 5.908916 TTAAATTAAACTGCCGCCAAAAC 57.091 34.783 0.00 0.00 0.00 2.43
8892 13384 2.058913 ATTAAACTGCCGCCAAAACG 57.941 45.000 0.00 0.00 0.00 3.60
8893 13385 0.739561 TTAAACTGCCGCCAAAACGT 59.260 45.000 0.00 0.00 0.00 3.99
8894 13386 0.308376 TAAACTGCCGCCAAAACGTC 59.692 50.000 0.00 0.00 0.00 4.34
8895 13387 1.381165 AAACTGCCGCCAAAACGTCT 61.381 50.000 0.00 0.00 0.00 4.18
8896 13388 1.381165 AACTGCCGCCAAAACGTCTT 61.381 50.000 0.00 0.00 0.00 3.01
8897 13389 0.533308 ACTGCCGCCAAAACGTCTTA 60.533 50.000 0.00 0.00 0.00 2.10
8898 13390 0.802494 CTGCCGCCAAAACGTCTTAT 59.198 50.000 0.00 0.00 0.00 1.73
8899 13391 2.004017 CTGCCGCCAAAACGTCTTATA 58.996 47.619 0.00 0.00 0.00 0.98
8900 13392 1.733360 TGCCGCCAAAACGTCTTATAC 59.267 47.619 0.00 0.00 0.00 1.47
8901 13393 2.004733 GCCGCCAAAACGTCTTATACT 58.995 47.619 0.00 0.00 0.00 2.12
8902 13394 2.030091 GCCGCCAAAACGTCTTATACTC 59.970 50.000 0.00 0.00 0.00 2.59
8903 13395 2.606272 CCGCCAAAACGTCTTATACTCC 59.394 50.000 0.00 0.00 0.00 3.85
8904 13396 2.606272 CGCCAAAACGTCTTATACTCCC 59.394 50.000 0.00 0.00 0.00 4.30
8905 13397 3.677976 CGCCAAAACGTCTTATACTCCCT 60.678 47.826 0.00 0.00 0.00 4.20
8906 13398 3.869832 GCCAAAACGTCTTATACTCCCTC 59.130 47.826 0.00 0.00 0.00 4.30
8907 13399 4.439968 CCAAAACGTCTTATACTCCCTCC 58.560 47.826 0.00 0.00 0.00 4.30
8908 13400 4.110482 CAAAACGTCTTATACTCCCTCCG 58.890 47.826 0.00 0.00 0.00 4.63
8909 13401 2.725221 ACGTCTTATACTCCCTCCGT 57.275 50.000 0.00 0.00 0.00 4.69
8910 13402 3.845781 ACGTCTTATACTCCCTCCGTA 57.154 47.619 0.00 0.00 0.00 4.02
8911 13403 4.156455 ACGTCTTATACTCCCTCCGTAA 57.844 45.455 0.00 0.00 0.00 3.18
8912 13404 4.526970 ACGTCTTATACTCCCTCCGTAAA 58.473 43.478 0.00 0.00 0.00 2.01
8913 13405 4.578105 ACGTCTTATACTCCCTCCGTAAAG 59.422 45.833 0.00 0.00 0.00 1.85
8914 13406 4.818546 CGTCTTATACTCCCTCCGTAAAGA 59.181 45.833 0.00 0.00 0.00 2.52
8915 13407 5.297776 CGTCTTATACTCCCTCCGTAAAGAA 59.702 44.000 0.00 0.00 0.00 2.52
8916 13408 6.513066 CGTCTTATACTCCCTCCGTAAAGAAG 60.513 46.154 0.00 0.00 0.00 2.85
8917 13409 6.320926 GTCTTATACTCCCTCCGTAAAGAAGT 59.679 42.308 0.00 0.00 0.00 3.01
8918 13410 7.500559 GTCTTATACTCCCTCCGTAAAGAAGTA 59.499 40.741 0.00 0.00 0.00 2.24
8919 13411 8.223330 TCTTATACTCCCTCCGTAAAGAAGTAT 58.777 37.037 0.00 0.00 0.00 2.12
8920 13412 9.512588 CTTATACTCCCTCCGTAAAGAAGTATA 57.487 37.037 0.00 0.00 0.00 1.47
8921 13413 9.866655 TTATACTCCCTCCGTAAAGAAGTATAA 57.133 33.333 0.00 0.00 32.94 0.98
8922 13414 6.712179 ACTCCCTCCGTAAAGAAGTATAAG 57.288 41.667 0.00 0.00 0.00 1.73
8923 13415 6.430007 ACTCCCTCCGTAAAGAAGTATAAGA 58.570 40.000 0.00 0.00 0.00 2.10
8924 13416 7.068061 ACTCCCTCCGTAAAGAAGTATAAGAT 58.932 38.462 0.00 0.00 0.00 2.40
8925 13417 7.231115 ACTCCCTCCGTAAAGAAGTATAAGATC 59.769 40.741 0.00 0.00 0.00 2.75
8926 13418 6.206243 TCCCTCCGTAAAGAAGTATAAGATCG 59.794 42.308 0.00 0.00 0.00 3.69
8927 13419 6.016443 CCCTCCGTAAAGAAGTATAAGATCGT 60.016 42.308 0.00 0.00 0.00 3.73
8928 13420 7.424001 CCTCCGTAAAGAAGTATAAGATCGTT 58.576 38.462 0.00 0.00 0.00 3.85
8929 13421 7.919621 CCTCCGTAAAGAAGTATAAGATCGTTT 59.080 37.037 0.00 0.00 0.00 3.60
8930 13422 9.941664 CTCCGTAAAGAAGTATAAGATCGTTTA 57.058 33.333 0.00 0.00 0.00 2.01
8931 13423 9.941664 TCCGTAAAGAAGTATAAGATCGTTTAG 57.058 33.333 0.00 0.00 0.00 1.85
8932 13424 9.941664 CCGTAAAGAAGTATAAGATCGTTTAGA 57.058 33.333 0.00 0.00 0.00 2.10
8996 13488 4.472833 AGAGGGAGCATTAATGAACAGAGT 59.527 41.667 19.73 0.00 0.00 3.24
9152 15485 1.944709 TCATCTGCGGATGCTTCAATG 59.055 47.619 27.68 6.42 46.41 2.82
9229 15562 4.527944 AGGTTCTCCAAATAAGCTTAGGC 58.472 43.478 12.54 0.00 35.89 3.93
9260 15593 5.761165 TTTACTACTTGTGGTTTTCTGGC 57.239 39.130 0.00 0.00 0.00 4.85
9277 15610 5.102953 TCTGGCTGCTTGAATAATGTAGT 57.897 39.130 0.00 0.00 0.00 2.73
9278 15611 5.118990 TCTGGCTGCTTGAATAATGTAGTC 58.881 41.667 0.00 0.00 0.00 2.59
9279 15612 5.102953 TGGCTGCTTGAATAATGTAGTCT 57.897 39.130 0.00 0.00 0.00 3.24
9280 15613 4.877823 TGGCTGCTTGAATAATGTAGTCTG 59.122 41.667 0.00 0.00 0.00 3.51
9281 15614 4.274459 GGCTGCTTGAATAATGTAGTCTGG 59.726 45.833 0.00 0.00 0.00 3.86
9282 15615 5.118990 GCTGCTTGAATAATGTAGTCTGGA 58.881 41.667 0.00 0.00 0.00 3.86
9283 15616 5.007136 GCTGCTTGAATAATGTAGTCTGGAC 59.993 44.000 0.00 0.00 0.00 4.02
9351 15684 5.476091 TTTGGTCCACTGTTTCTTTTTGT 57.524 34.783 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 97 5.991606 CACTTCCACAGACATAGTTCTCAAA 59.008 40.000 0.00 0.00 0.00 2.69
92 98 5.304357 TCACTTCCACAGACATAGTTCTCAA 59.696 40.000 0.00 0.00 0.00 3.02
171 177 2.230660 GAAAATGGGGAAGATAGGGCG 58.769 52.381 0.00 0.00 0.00 6.13
173 179 3.857157 TCGAAAATGGGGAAGATAGGG 57.143 47.619 0.00 0.00 0.00 3.53
187 194 4.566004 AGAGACGAAACCATGATCGAAAA 58.434 39.130 18.18 0.00 41.43 2.29
244 251 0.534203 ACTTGTTTCGCCGACCACAT 60.534 50.000 0.00 0.00 0.00 3.21
325 339 0.182775 AAACCAACCGCCAGAGAACT 59.817 50.000 0.00 0.00 0.00 3.01
445 459 4.393155 AGATCGCCGCCTTGCACA 62.393 61.111 0.00 0.00 0.00 4.57
456 476 0.683973 AGGATCCCATGTGAGATCGC 59.316 55.000 8.55 0.00 39.88 4.58
505 525 2.484770 CCCAACACGGAGAAAGAGACAA 60.485 50.000 0.00 0.00 36.56 3.18
507 527 1.343465 TCCCAACACGGAGAAAGAGAC 59.657 52.381 0.00 0.00 36.56 3.36
514 534 1.671742 GAGCTTCCCAACACGGAGA 59.328 57.895 0.00 0.00 36.56 3.71
537 557 2.104859 TACGCGAGGAGTGAGACGG 61.105 63.158 15.93 0.00 0.00 4.79
562 582 2.903357 CCGTCCCACCAGATCCAG 59.097 66.667 0.00 0.00 0.00 3.86
595 615 1.133792 CCCCAACTAGGATTTCGCCAT 60.134 52.381 0.00 0.00 41.22 4.40
640 661 1.986210 GGCAGCATTTGAAGGCCCT 60.986 57.895 0.00 0.00 38.70 5.19
732 753 7.505585 TGGACATGAACTTAATTTGAAAGACCT 59.494 33.333 0.00 0.00 0.00 3.85
735 756 7.370383 GCTGGACATGAACTTAATTTGAAAGA 58.630 34.615 0.00 0.00 0.00 2.52
769 790 0.325671 TGGAGCTAGAGTGAAGGGGG 60.326 60.000 0.00 0.00 0.00 5.40
777 798 0.615850 GGCCAACTTGGAGCTAGAGT 59.384 55.000 12.37 0.00 40.96 3.24
817 840 0.914902 GGGGCTAGGAACAAGAGGGT 60.915 60.000 0.00 0.00 0.00 4.34
828 851 0.323725 ATGTGCAACTTGGGGCTAGG 60.324 55.000 0.00 0.00 38.04 3.02
865 888 0.698818 GGGATCAAGACAACCCACCT 59.301 55.000 0.00 0.00 41.72 4.00
926 950 4.855340 AGAAGAAAAGTGGTGGTGAGAAA 58.145 39.130 0.00 0.00 0.00 2.52
1069 1099 8.821894 GTTGCGAACTAGATCTGATAAATCTTT 58.178 33.333 5.18 0.00 35.20 2.52
1071 1101 7.492524 TGTTGCGAACTAGATCTGATAAATCT 58.507 34.615 5.18 0.00 37.29 2.40
1075 1105 7.097192 ACTTTGTTGCGAACTAGATCTGATAA 58.903 34.615 5.18 0.00 0.00 1.75
1086 1116 4.412207 GAAACTCAACTTTGTTGCGAACT 58.588 39.130 7.31 0.00 0.00 3.01
1096 1126 3.528532 ACTTCGGACGAAACTCAACTTT 58.471 40.909 8.59 0.00 33.34 2.66
1105 1135 2.614983 CCCTTTGAAACTTCGGACGAAA 59.385 45.455 8.59 0.00 33.34 3.46
1131 1161 7.158021 CCCAACTCTCATATTCATACTCTTCC 58.842 42.308 0.00 0.00 0.00 3.46
1140 1170 3.114606 TGAGCCCCAACTCTCATATTCA 58.885 45.455 0.00 0.00 37.58 2.57
1143 1173 1.771255 GGTGAGCCCCAACTCTCATAT 59.229 52.381 0.00 0.00 40.89 1.78
1228 1258 6.830324 GGATCTAGAGCATCATCAGATCTAGT 59.170 42.308 10.68 3.82 46.69 2.57
1245 1275 2.223735 CGCTTTAAGCCACGGATCTAGA 60.224 50.000 11.64 0.00 38.18 2.43
1286 1316 4.082190 CAGATCTAGGGTTGTCGTTCAAGA 60.082 45.833 0.00 0.00 36.66 3.02
1290 1320 4.451629 TTCAGATCTAGGGTTGTCGTTC 57.548 45.455 0.00 0.00 0.00 3.95
1312 1348 7.615757 TGAGGAGTTGATGTAGTTCAATCTAGA 59.384 37.037 0.00 0.00 37.88 2.43
1626 4422 5.781818 TCCATGAACATGCATCTAGAGGATA 59.218 40.000 8.95 0.00 37.49 2.59
1641 4437 4.077108 ACTACACTAGACGTCCATGAACA 58.923 43.478 13.01 0.00 0.00 3.18
1643 4439 5.353400 CACTACTACACTAGACGTCCATGAA 59.647 44.000 13.01 0.00 0.00 2.57
1658 4454 1.739466 CGGGAGCGTAACACTACTACA 59.261 52.381 0.00 0.00 0.00 2.74
1700 4496 1.764723 TCAATCTGCATCGGATCCTGT 59.235 47.619 10.75 0.00 0.00 4.00
1703 4499 2.612471 CCTCTCAATCTGCATCGGATCC 60.612 54.545 0.00 0.00 0.00 3.36
1712 4508 4.092675 CGAAAGTTCTTCCTCTCAATCTGC 59.907 45.833 0.00 0.00 0.00 4.26
1780 4578 0.751643 CCAATTACCCCTGAAGCCCG 60.752 60.000 0.00 0.00 0.00 6.13
1781 4579 1.043116 GCCAATTACCCCTGAAGCCC 61.043 60.000 0.00 0.00 0.00 5.19
1782 4580 0.324275 TGCCAATTACCCCTGAAGCC 60.324 55.000 0.00 0.00 0.00 4.35
1783 4581 0.817654 GTGCCAATTACCCCTGAAGC 59.182 55.000 0.00 0.00 0.00 3.86
1784 4582 2.094675 CTGTGCCAATTACCCCTGAAG 58.905 52.381 0.00 0.00 0.00 3.02
1785 4583 1.272425 CCTGTGCCAATTACCCCTGAA 60.272 52.381 0.00 0.00 0.00 3.02
1823 4661 7.224557 AGGTGCAAAAACAATTAAACAAGCTAG 59.775 33.333 0.00 0.00 0.00 3.42
1824 4662 7.044798 AGGTGCAAAAACAATTAAACAAGCTA 58.955 30.769 0.00 0.00 0.00 3.32
1825 4663 5.879777 AGGTGCAAAAACAATTAAACAAGCT 59.120 32.000 0.00 0.00 0.00 3.74
1903 4741 2.351244 CCGGAGCACAGGAGTAGCA 61.351 63.158 0.00 0.00 33.26 3.49
1904 4742 1.395826 ATCCGGAGCACAGGAGTAGC 61.396 60.000 11.34 0.00 42.95 3.58
1910 4748 2.894126 ACTAAGATATCCGGAGCACAGG 59.106 50.000 11.34 0.00 0.00 4.00
1911 4749 4.592485 AACTAAGATATCCGGAGCACAG 57.408 45.455 11.34 4.69 0.00 3.66
1943 4781 2.918712 TAAGCATCCTAAGAGCAGGC 57.081 50.000 0.00 0.00 35.49 4.85
2074 4912 8.598924 CAAGTGCACTACAGACAAGATAAATAG 58.401 37.037 22.01 0.00 0.00 1.73
2117 4955 4.338400 ACAATCAATCATCCATGAGCAGTG 59.662 41.667 0.00 0.00 40.64 3.66
2136 4975 9.347240 CCTCACTTTCAATATTCATAGGACAAT 57.653 33.333 0.00 0.00 0.00 2.71
2178 5017 4.816925 GCATCCTCAACAATTAGTCCCTAC 59.183 45.833 0.00 0.00 0.00 3.18
2254 5167 2.966324 TCGTCCAACGATTATGGCG 58.034 52.632 0.00 1.12 46.73 5.69
2270 5183 3.368495 TCGATACAAACATGACGGATCG 58.632 45.455 16.89 16.89 36.83 3.69
2341 5254 4.025480 GGCATTTAAGTGGTTATACGGTCG 60.025 45.833 0.00 0.00 0.00 4.79
2344 5257 3.872771 ACGGCATTTAAGTGGTTATACGG 59.127 43.478 0.00 0.00 0.00 4.02
2345 5258 4.330620 ACACGGCATTTAAGTGGTTATACG 59.669 41.667 0.00 0.00 39.95 3.06
2349 5262 3.884091 ACAACACGGCATTTAAGTGGTTA 59.116 39.130 0.00 0.00 39.95 2.85
2369 5282 3.704100 TGCAGCACTAAGAAGCACA 57.296 47.368 0.00 0.00 0.00 4.57
2566 5479 6.423905 GCGATATGGCACTTCAACTAAATCTA 59.576 38.462 4.65 0.00 0.00 1.98
2582 5495 7.556733 AGTAGTATAACTAGAGCGATATGGC 57.443 40.000 0.72 0.72 30.12 4.40
2623 5536 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
2624 5537 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
2625 5538 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2626 5539 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2627 5540 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2628 5541 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2629 5542 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2630 5543 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2631 5544 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2632 5545 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2633 5546 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2634 5547 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2635 5548 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
2636 5549 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
2642 5555 8.748412 CCCTTTTATCCATTTTGATGACAAGTA 58.252 33.333 0.00 0.00 37.32 2.24
2643 5556 7.310609 CCCCTTTTATCCATTTTGATGACAAGT 60.311 37.037 0.00 0.00 37.32 3.16
2644 5557 7.043565 CCCCTTTTATCCATTTTGATGACAAG 58.956 38.462 0.00 0.00 37.32 3.16
2645 5558 6.728164 TCCCCTTTTATCCATTTTGATGACAA 59.272 34.615 0.00 0.00 0.00 3.18
2646 5559 6.259893 TCCCCTTTTATCCATTTTGATGACA 58.740 36.000 0.00 0.00 0.00 3.58
2647 5560 6.790232 TCCCCTTTTATCCATTTTGATGAC 57.210 37.500 0.00 0.00 0.00 3.06
2648 5561 6.183360 GCATCCCCTTTTATCCATTTTGATGA 60.183 38.462 0.00 0.00 0.00 2.92
2649 5562 5.993441 GCATCCCCTTTTATCCATTTTGATG 59.007 40.000 0.00 0.00 0.00 3.07
2650 5563 5.666718 TGCATCCCCTTTTATCCATTTTGAT 59.333 36.000 0.00 0.00 0.00 2.57
2651 5564 5.028802 TGCATCCCCTTTTATCCATTTTGA 58.971 37.500 0.00 0.00 0.00 2.69
2652 5565 5.356291 TGCATCCCCTTTTATCCATTTTG 57.644 39.130 0.00 0.00 0.00 2.44
2653 5566 5.907079 AGATGCATCCCCTTTTATCCATTTT 59.093 36.000 23.06 0.00 0.00 1.82
2654 5567 5.470501 AGATGCATCCCCTTTTATCCATTT 58.529 37.500 23.06 0.00 0.00 2.32
2655 5568 5.083953 AGATGCATCCCCTTTTATCCATT 57.916 39.130 23.06 0.00 0.00 3.16
2656 5569 4.754411 AGATGCATCCCCTTTTATCCAT 57.246 40.909 23.06 0.00 0.00 3.41
2657 5570 4.913355 TCTAGATGCATCCCCTTTTATCCA 59.087 41.667 23.06 0.00 0.00 3.41
2658 5571 5.505181 TCTAGATGCATCCCCTTTTATCC 57.495 43.478 23.06 0.00 0.00 2.59
2659 5572 9.520515 TTAATTCTAGATGCATCCCCTTTTATC 57.479 33.333 23.06 0.00 0.00 1.75
2660 5573 9.881773 TTTAATTCTAGATGCATCCCCTTTTAT 57.118 29.630 23.06 4.58 0.00 1.40
2661 5574 9.707957 TTTTAATTCTAGATGCATCCCCTTTTA 57.292 29.630 23.06 12.71 0.00 1.52
2662 5575 8.608185 TTTTAATTCTAGATGCATCCCCTTTT 57.392 30.769 23.06 13.63 0.00 2.27
2663 5576 8.788238 ATTTTAATTCTAGATGCATCCCCTTT 57.212 30.769 23.06 12.65 0.00 3.11
2664 5577 9.301897 GTATTTTAATTCTAGATGCATCCCCTT 57.698 33.333 23.06 11.86 0.00 3.95
2665 5578 7.607991 CGTATTTTAATTCTAGATGCATCCCCT 59.392 37.037 23.06 7.62 0.00 4.79
2666 5579 7.390718 ACGTATTTTAATTCTAGATGCATCCCC 59.609 37.037 23.06 0.00 0.00 4.81
2667 5580 8.324163 ACGTATTTTAATTCTAGATGCATCCC 57.676 34.615 23.06 0.00 0.00 3.85
2668 5581 9.209175 AGACGTATTTTAATTCTAGATGCATCC 57.791 33.333 23.06 5.58 0.00 3.51
2691 5604 4.732672 ACAAAAGGGGACGTATCTAGAC 57.267 45.455 0.00 0.00 0.00 2.59
2692 5605 4.773674 TGAACAAAAGGGGACGTATCTAGA 59.226 41.667 0.00 0.00 0.00 2.43
2693 5606 5.080969 TGAACAAAAGGGGACGTATCTAG 57.919 43.478 0.00 0.00 0.00 2.43
2694 5607 5.687166 ATGAACAAAAGGGGACGTATCTA 57.313 39.130 0.00 0.00 0.00 1.98
2695 5608 4.569719 ATGAACAAAAGGGGACGTATCT 57.430 40.909 0.00 0.00 0.00 1.98
2696 5609 5.638596 AAATGAACAAAAGGGGACGTATC 57.361 39.130 0.00 0.00 0.00 2.24
2697 5610 5.536916 TCAAAATGAACAAAAGGGGACGTAT 59.463 36.000 0.00 0.00 0.00 3.06
2698 5611 4.888239 TCAAAATGAACAAAAGGGGACGTA 59.112 37.500 0.00 0.00 0.00 3.57
2699 5612 3.702045 TCAAAATGAACAAAAGGGGACGT 59.298 39.130 0.00 0.00 0.00 4.34
2700 5613 4.314740 TCAAAATGAACAAAAGGGGACG 57.685 40.909 0.00 0.00 0.00 4.79
2701 5614 5.696270 GTCATCAAAATGAACAAAAGGGGAC 59.304 40.000 0.00 0.00 43.42 4.46
2702 5615 5.365025 TGTCATCAAAATGAACAAAAGGGGA 59.635 36.000 0.00 0.00 43.42 4.81
2703 5616 5.609423 TGTCATCAAAATGAACAAAAGGGG 58.391 37.500 0.00 0.00 43.42 4.79
2704 5617 6.762661 ACTTGTCATCAAAATGAACAAAAGGG 59.237 34.615 0.87 0.00 43.42 3.95
2705 5618 7.775397 ACTTGTCATCAAAATGAACAAAAGG 57.225 32.000 0.87 0.00 43.42 3.11
2709 5622 9.474920 GGAAATACTTGTCATCAAAATGAACAA 57.525 29.630 0.00 0.00 43.42 2.83
2710 5623 7.807433 CGGAAATACTTGTCATCAAAATGAACA 59.193 33.333 0.00 0.00 43.42 3.18
2711 5624 7.273381 CCGGAAATACTTGTCATCAAAATGAAC 59.727 37.037 0.00 0.00 43.42 3.18
2712 5625 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
2713 5626 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
2714 5627 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2715 5628 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2716 5629 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2717 5630 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2718 5631 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2719 5632 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2720 5633 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2721 5634 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2722 5635 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2723 5636 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2724 5637 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2725 5638 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2726 5639 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2727 5640 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2728 5641 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2729 5642 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2730 5643 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2731 5644 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2732 5645 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
2733 5646 0.846015 TAATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
2734 5647 1.696063 TTAATACTCCCTCCGTCCGG 58.304 55.000 0.00 0.00 0.00 5.14
2735 5648 5.458041 TTAATTAATACTCCCTCCGTCCG 57.542 43.478 0.00 0.00 0.00 4.79
2736 5649 7.179872 ACCTATTAATTAATACTCCCTCCGTCC 59.820 40.741 12.90 0.00 0.00 4.79
2737 5650 8.131847 ACCTATTAATTAATACTCCCTCCGTC 57.868 38.462 12.90 0.00 0.00 4.79
2738 5651 9.605951 TTACCTATTAATTAATACTCCCTCCGT 57.394 33.333 12.90 3.95 0.00 4.69
2834 5747 9.931210 CGTTTTTAGAAGGACAAATATCCATAC 57.069 33.333 0.00 0.00 41.73 2.39
2952 5865 9.448294 TTTTTATGAAACAAATGCTGCAAAATC 57.552 25.926 6.36 0.57 0.00 2.17
2979 5893 5.163227 ACGAGACTCCACAGGATATGTACTA 60.163 44.000 0.00 0.00 41.41 1.82
2980 5894 4.138290 CGAGACTCCACAGGATATGTACT 58.862 47.826 0.00 0.00 41.41 2.73
2985 5899 4.166246 TGTACGAGACTCCACAGGATAT 57.834 45.455 0.00 0.00 0.00 1.63
2988 5902 2.509166 ATGTACGAGACTCCACAGGA 57.491 50.000 9.65 0.00 0.00 3.86
3010 5924 7.867305 TGAATACAAACACCACACTAAAAGA 57.133 32.000 0.00 0.00 0.00 2.52
3018 5932 4.340666 AGCAACATGAATACAAACACCACA 59.659 37.500 0.00 0.00 0.00 4.17
3051 5965 0.248843 GCAGCAGAAGGAGCACTACT 59.751 55.000 0.00 0.00 0.00 2.57
3052 5966 0.742635 GGCAGCAGAAGGAGCACTAC 60.743 60.000 0.00 0.00 0.00 2.73
3053 5967 1.194121 TGGCAGCAGAAGGAGCACTA 61.194 55.000 0.00 0.00 0.00 2.74
3147 6061 5.580022 ACTAAATCACCTTTAATGGCTGGT 58.420 37.500 7.29 0.00 0.00 4.00
3183 6097 2.683968 TCAATCCTTTCGTTCTGACCG 58.316 47.619 0.00 0.00 0.00 4.79
3201 6115 2.705658 AGGTCTTGTGGTCTGATGTTCA 59.294 45.455 0.00 0.00 0.00 3.18
3239 6153 4.960866 CACAGCCCAGCACTGCCA 62.961 66.667 0.00 0.00 38.79 4.92
3330 6246 0.235665 CGTGATCACTGCAACACCAC 59.764 55.000 22.95 0.00 0.00 4.16
3476 6395 0.669318 TCGATCCGTGTGTGGCTTTC 60.669 55.000 0.00 0.00 0.00 2.62
3592 6511 2.372837 GGTGGTGGTCCAGTTAAAGGTA 59.627 50.000 0.00 0.00 45.24 3.08
3593 6512 1.144298 GGTGGTGGTCCAGTTAAAGGT 59.856 52.381 0.00 0.00 45.24 3.50
3761 6681 1.729149 GCACTGCGCCTATTTGTTCAC 60.729 52.381 4.18 0.00 32.94 3.18
3815 6735 1.918262 AGGAAGAGATGGCCACATGAA 59.082 47.619 8.16 0.00 37.47 2.57
3831 6751 4.100963 TGCGGATTATCTTGCTAGAAGGAA 59.899 41.667 0.99 0.00 33.20 3.36
3837 6757 4.926238 CCTAACTGCGGATTATCTTGCTAG 59.074 45.833 0.00 8.61 0.00 3.42
3878 6798 3.004734 AGGTCAAATTCTTTTCGTGGCTG 59.995 43.478 0.00 0.00 0.00 4.85
3884 6804 4.219033 CCACGAAGGTCAAATTCTTTTCG 58.781 43.478 0.00 3.24 42.04 3.46
3902 6822 1.508088 GCAAATCAAGCTCCCCACG 59.492 57.895 0.00 0.00 0.00 4.94
3911 6831 7.709947 TCAAGAAGCTTATATGGCAAATCAAG 58.290 34.615 0.00 0.00 0.00 3.02
3919 6839 3.073062 TCCCCTCAAGAAGCTTATATGGC 59.927 47.826 0.00 0.00 0.00 4.40
3956 6876 6.204882 GCTCCGCCTACACTATTCAATTTATT 59.795 38.462 0.00 0.00 0.00 1.40
3962 6882 2.108168 AGCTCCGCCTACACTATTCAA 58.892 47.619 0.00 0.00 0.00 2.69
3975 6895 1.801178 GAAATATACTGCCAGCTCCGC 59.199 52.381 0.00 0.00 0.00 5.54
3976 6896 3.393089 AGAAATATACTGCCAGCTCCG 57.607 47.619 0.00 0.00 0.00 4.63
4006 6926 3.202151 GGATAAGGTGGAATGGAAGTGGA 59.798 47.826 0.00 0.00 0.00 4.02
4061 6981 4.933505 TGAACACATTGATTTCTGGCAA 57.066 36.364 0.00 0.00 0.00 4.52
4138 7058 3.136123 CAGTTGCGGATGGCCTGG 61.136 66.667 3.32 0.00 42.61 4.45
4141 7061 1.153086 ATCTCAGTTGCGGATGGCC 60.153 57.895 0.00 0.00 42.61 5.36
4194 7114 2.890311 TCGCCCCATTTATTATTGCCTG 59.110 45.455 0.00 0.00 0.00 4.85
4234 7154 3.113322 CGTTCTCTGTCGTTCTCAAACA 58.887 45.455 0.00 0.00 34.93 2.83
4238 7158 0.039437 GCCGTTCTCTGTCGTTCTCA 60.039 55.000 0.00 0.00 0.00 3.27
4239 7159 0.733223 GGCCGTTCTCTGTCGTTCTC 60.733 60.000 0.00 0.00 0.00 2.87
4249 7169 0.868406 CACAGAAACTGGCCGTTCTC 59.132 55.000 12.01 11.46 35.51 2.87
4263 7183 0.321919 GCCAGCACTTCCATCACAGA 60.322 55.000 0.00 0.00 0.00 3.41
4277 7197 2.029518 GGCCTGTTTGTTGCCAGC 59.970 61.111 0.00 0.00 44.70 4.85
4317 7237 1.153168 CTTGGCATGGTCTACCCCG 60.153 63.158 0.00 0.00 34.29 5.73
4345 7265 2.407428 TGGCAAAACGCAACGGACA 61.407 52.632 0.00 0.00 45.17 4.02
4350 7270 2.237066 GGCTGTGGCAAAACGCAAC 61.237 57.895 0.00 0.00 45.78 4.17
4407 7327 0.107459 GGACTTGGCATCCCTGACTC 60.107 60.000 0.00 0.00 0.00 3.36
4434 7354 2.094675 CCAAGTTTGTATGCCCCTGAG 58.905 52.381 0.00 0.00 0.00 3.35
4459 7379 1.074951 GGTAAGGGCCTGCTGTGTT 59.925 57.895 6.92 0.00 0.00 3.32
4493 7413 3.567397 GACTTCCTATGGGCTGAGTCTA 58.433 50.000 14.53 0.00 35.68 2.59
4655 7575 3.265479 AGGTATGCTTCTTCTTTGAGGCT 59.735 43.478 0.00 0.00 39.39 4.58
4992 7934 5.499004 AACAATTTAGCACACTCTAGGGA 57.501 39.130 0.00 0.00 0.00 4.20
5073 8015 4.771590 TGGCATCAAGTCTTGCTTTTAG 57.228 40.909 7.78 0.00 38.88 1.85
5142 8084 1.953559 GCATGTCGCTTAGGATTGGA 58.046 50.000 0.00 0.00 37.77 3.53
5224 8166 4.517285 TGTAAATAGCAGAGGGAAGCAAG 58.483 43.478 0.00 0.00 0.00 4.01
5268 8210 6.239036 GCCATGCCGATATGATATGTAGTCTA 60.239 42.308 0.00 0.00 0.00 2.59
5416 8361 5.215160 CAAAAAGTCCGAACTTGATGGAAG 58.785 41.667 0.00 0.00 45.07 3.46
5425 8370 5.735070 GCCAACATAACAAAAAGTCCGAACT 60.735 40.000 0.00 0.00 37.32 3.01
5438 8383 4.293662 TCATGTACTGGCCAACATAACA 57.706 40.909 20.20 13.56 34.61 2.41
5442 8387 2.094675 GCTTCATGTACTGGCCAACAT 58.905 47.619 15.95 15.95 36.78 2.71
5450 8395 5.412594 ACACCATGTTAAGCTTCATGTACTG 59.587 40.000 20.65 15.87 39.53 2.74
5509 8454 2.223711 CCAACGAAACCAAAAGTCTGGG 60.224 50.000 0.00 0.00 41.16 4.45
5510 8455 2.798145 GCCAACGAAACCAAAAGTCTGG 60.798 50.000 0.00 0.00 42.68 3.86
5657 8604 2.213499 GCCAACATATGAAGACTCGGG 58.787 52.381 10.38 0.25 0.00 5.14
5666 8613 1.317613 GCGGGAATGCCAACATATGA 58.682 50.000 10.38 0.00 34.62 2.15
5668 8615 1.795170 GCGCGGGAATGCCAACATAT 61.795 55.000 8.83 0.00 34.62 1.78
5669 8616 2.477176 GCGCGGGAATGCCAACATA 61.477 57.895 8.83 0.00 34.62 2.29
5676 8623 4.557605 CATGTGGCGCGGGAATGC 62.558 66.667 8.83 0.00 0.00 3.56
5677 8625 3.133464 ACATGTGGCGCGGGAATG 61.133 61.111 8.83 5.37 0.00 2.67
5678 8626 3.133464 CACATGTGGCGCGGGAAT 61.133 61.111 18.51 0.00 0.00 3.01
5692 8640 0.764890 CTTCAACACCCCCTCTCACA 59.235 55.000 0.00 0.00 0.00 3.58
5726 8675 2.293170 GAACTGATGGAAAGGGCTAGC 58.707 52.381 6.04 6.04 0.00 3.42
5811 8763 7.997773 AAAGTCTAAACTTATGGAAAGGGTC 57.002 36.000 0.00 0.00 45.07 4.46
5812 8764 7.232737 CCAAAAGTCTAAACTTATGGAAAGGGT 59.767 37.037 0.00 0.00 45.07 4.34
5863 8815 4.141620 ACCTTAGGCTCTGATACCATGTTG 60.142 45.833 0.00 0.00 0.00 3.33
5926 8878 2.045242 CAGAGTGGGCAGCAGCAT 60.045 61.111 2.65 0.00 44.61 3.79
6048 9001 1.524008 CCGAACTGGTGAAAAGGGCC 61.524 60.000 0.00 0.00 0.00 5.80
6066 9019 0.874175 GCCAACGCAACCAAAAGTCC 60.874 55.000 0.00 0.00 34.03 3.85
6220 9174 4.503910 TGTCTCCATTGTCAGGTTTATCG 58.496 43.478 0.00 0.00 0.00 2.92
6350 9324 8.417884 CCAAAAGAAGTGACCAAACCTAATAAA 58.582 33.333 0.00 0.00 0.00 1.40
6504 9487 1.209504 CGTAGGGATGACAACACCCAT 59.790 52.381 15.03 6.01 45.43 4.00
6684 9689 1.001293 TGAGCTGAGTCATGGTCACAC 59.999 52.381 15.80 0.00 36.04 3.82
6786 9963 2.091720 TGGATTCCTAGTGCATGCCAAT 60.092 45.455 16.68 5.27 0.00 3.16
6848 10028 0.950555 CCCAGTGATGTGTGTCGTGG 60.951 60.000 0.00 0.00 0.00 4.94
6978 10167 3.569250 ACGGTGATGCCAAAATAACAC 57.431 42.857 0.00 0.00 36.97 3.32
7046 10235 5.923204 AGTAATGTCCATAAGCTCAGGAAG 58.077 41.667 3.58 0.00 32.30 3.46
7048 10237 4.962362 TGAGTAATGTCCATAAGCTCAGGA 59.038 41.667 0.00 0.00 0.00 3.86
7378 10596 2.107950 TATGGCACGGAGAACAAAGG 57.892 50.000 0.00 0.00 0.00 3.11
7433 10655 5.248870 ACAAGAAACGAGATGCAAAAAGT 57.751 34.783 0.00 0.00 0.00 2.66
7907 11144 3.069729 ACCTTAGACACTCGGATTATGCC 59.930 47.826 0.00 0.00 0.00 4.40
7939 11176 9.740710 AGTTGCAAGTAGAGGATAAATTAGTTT 57.259 29.630 4.57 0.00 0.00 2.66
8001 11238 1.334243 CCCGGCTAGTCTAAGACTTCG 59.666 57.143 0.00 0.00 40.28 3.79
8015 11252 0.904394 TTCCGGTAAACTACCCGGCT 60.904 55.000 12.12 0.00 46.27 5.52
8193 11450 7.805071 CACATGACAAAACAGAAGGATAAGAAC 59.195 37.037 0.00 0.00 0.00 3.01
8714 13202 8.789825 TTACGTAATTAATTTAGCAGGTCCAA 57.210 30.769 5.91 0.00 0.00 3.53
8837 13329 9.988350 CAAAACGTCTTATATTAATGAACAGCT 57.012 29.630 0.00 0.00 0.00 4.24
8878 13370 0.533308 TAAGACGTTTTGGCGGCAGT 60.533 50.000 12.87 6.52 43.41 4.40
8879 13371 0.802494 ATAAGACGTTTTGGCGGCAG 59.198 50.000 12.87 2.62 43.41 4.85
8880 13372 1.733360 GTATAAGACGTTTTGGCGGCA 59.267 47.619 7.97 7.97 43.41 5.69
8881 13373 2.004733 AGTATAAGACGTTTTGGCGGC 58.995 47.619 0.00 0.00 40.82 6.53
8882 13374 2.606272 GGAGTATAAGACGTTTTGGCGG 59.394 50.000 0.83 0.00 35.98 6.13
8883 13375 2.606272 GGGAGTATAAGACGTTTTGGCG 59.394 50.000 0.83 0.00 37.94 5.69
8884 13376 3.869832 GAGGGAGTATAAGACGTTTTGGC 59.130 47.826 0.83 0.00 0.00 4.52
8885 13377 4.439968 GGAGGGAGTATAAGACGTTTTGG 58.560 47.826 0.83 0.00 0.00 3.28
8886 13378 4.110482 CGGAGGGAGTATAAGACGTTTTG 58.890 47.826 0.83 0.00 0.00 2.44
8887 13379 3.766051 ACGGAGGGAGTATAAGACGTTTT 59.234 43.478 0.00 0.00 0.00 2.43
8888 13380 3.359950 ACGGAGGGAGTATAAGACGTTT 58.640 45.455 0.00 0.00 0.00 3.60
8889 13381 3.010200 ACGGAGGGAGTATAAGACGTT 57.990 47.619 0.00 0.00 0.00 3.99
8890 13382 2.725221 ACGGAGGGAGTATAAGACGT 57.275 50.000 0.00 0.00 0.00 4.34
8891 13383 4.818546 TCTTTACGGAGGGAGTATAAGACG 59.181 45.833 0.00 0.00 0.00 4.18
8892 13384 6.320926 ACTTCTTTACGGAGGGAGTATAAGAC 59.679 42.308 0.00 0.00 0.00 3.01
8893 13385 6.430007 ACTTCTTTACGGAGGGAGTATAAGA 58.570 40.000 0.00 0.00 0.00 2.10
8894 13386 6.712179 ACTTCTTTACGGAGGGAGTATAAG 57.288 41.667 0.00 0.00 0.00 1.73
8895 13387 9.866655 TTATACTTCTTTACGGAGGGAGTATAA 57.133 33.333 14.52 14.52 36.95 0.98
8896 13388 9.512588 CTTATACTTCTTTACGGAGGGAGTATA 57.487 37.037 6.72 6.72 33.09 1.47
8897 13389 8.223330 TCTTATACTTCTTTACGGAGGGAGTAT 58.777 37.037 8.21 8.21 34.21 2.12
8898 13390 7.577303 TCTTATACTTCTTTACGGAGGGAGTA 58.423 38.462 0.00 0.00 0.00 2.59
8899 13391 6.430007 TCTTATACTTCTTTACGGAGGGAGT 58.570 40.000 0.00 0.00 0.00 3.85
8900 13392 6.956202 TCTTATACTTCTTTACGGAGGGAG 57.044 41.667 0.00 0.00 0.00 4.30
8901 13393 6.206243 CGATCTTATACTTCTTTACGGAGGGA 59.794 42.308 0.00 0.00 0.00 4.20
8902 13394 6.016443 ACGATCTTATACTTCTTTACGGAGGG 60.016 42.308 0.00 0.00 0.00 4.30
8903 13395 6.968250 ACGATCTTATACTTCTTTACGGAGG 58.032 40.000 0.00 0.00 0.00 4.30
8904 13396 8.853469 AAACGATCTTATACTTCTTTACGGAG 57.147 34.615 0.00 0.00 0.00 4.63
8905 13397 9.941664 CTAAACGATCTTATACTTCTTTACGGA 57.058 33.333 0.00 0.00 0.00 4.69
8906 13398 9.941664 TCTAAACGATCTTATACTTCTTTACGG 57.058 33.333 0.00 0.00 0.00 4.02
8952 13444 9.712305 CCCTCTGTAAAGAAATATACGATCATT 57.288 33.333 0.00 0.00 0.00 2.57
8953 13445 9.090103 TCCCTCTGTAAAGAAATATACGATCAT 57.910 33.333 0.00 0.00 0.00 2.45
8954 13446 8.473358 TCCCTCTGTAAAGAAATATACGATCA 57.527 34.615 0.00 0.00 0.00 2.92
8955 13447 7.542824 GCTCCCTCTGTAAAGAAATATACGATC 59.457 40.741 0.00 0.00 0.00 3.69
8956 13448 7.015292 TGCTCCCTCTGTAAAGAAATATACGAT 59.985 37.037 0.00 0.00 0.00 3.73
8957 13449 6.322969 TGCTCCCTCTGTAAAGAAATATACGA 59.677 38.462 0.00 0.00 0.00 3.43
8958 13450 6.513180 TGCTCCCTCTGTAAAGAAATATACG 58.487 40.000 0.00 0.00 0.00 3.06
8959 13451 8.910351 AATGCTCCCTCTGTAAAGAAATATAC 57.090 34.615 0.00 0.00 0.00 1.47
8962 13454 9.342308 CATTAATGCTCCCTCTGTAAAGAAATA 57.658 33.333 1.74 0.00 0.00 1.40
8963 13455 8.055181 TCATTAATGCTCCCTCTGTAAAGAAAT 58.945 33.333 10.76 0.00 0.00 2.17
8964 13456 7.402054 TCATTAATGCTCCCTCTGTAAAGAAA 58.598 34.615 10.76 0.00 0.00 2.52
8965 13457 6.957631 TCATTAATGCTCCCTCTGTAAAGAA 58.042 36.000 10.76 0.00 0.00 2.52
8966 13458 6.560003 TCATTAATGCTCCCTCTGTAAAGA 57.440 37.500 10.76 0.00 0.00 2.52
8967 13459 6.599244 TGTTCATTAATGCTCCCTCTGTAAAG 59.401 38.462 10.76 0.00 0.00 1.85
8968 13460 6.480763 TGTTCATTAATGCTCCCTCTGTAAA 58.519 36.000 10.76 0.00 0.00 2.01
8969 13461 6.061022 TGTTCATTAATGCTCCCTCTGTAA 57.939 37.500 10.76 0.00 0.00 2.41
8996 13488 6.946340 TGATCCTTTCTTAGAATGCTACACA 58.054 36.000 0.00 0.00 0.00 3.72
9260 15593 6.344500 AGTCCAGACTACATTATTCAAGCAG 58.656 40.000 0.00 0.00 40.43 4.24
9277 15610 3.827817 TTAGGAACTCCAGAGTCCAGA 57.172 47.619 14.62 4.21 41.58 3.86
9278 15611 3.578716 TGTTTAGGAACTCCAGAGTCCAG 59.421 47.826 14.62 0.00 41.58 3.86
9279 15612 3.578716 CTGTTTAGGAACTCCAGAGTCCA 59.421 47.826 14.62 3.47 41.58 4.02
9280 15613 3.833070 TCTGTTTAGGAACTCCAGAGTCC 59.167 47.826 0.00 4.73 41.58 3.85
9281 15614 5.669164 ATCTGTTTAGGAACTCCAGAGTC 57.331 43.478 0.00 0.00 41.58 3.36
9282 15615 6.257586 ACTATCTGTTTAGGAACTCCAGAGT 58.742 40.000 0.00 0.00 44.94 3.24
9283 15616 6.783708 ACTATCTGTTTAGGAACTCCAGAG 57.216 41.667 0.00 0.00 39.78 3.35
9337 15670 9.797556 GACTATTGGTTTACAAAAAGAAACAGT 57.202 29.630 0.00 0.00 43.46 3.55
9351 15684 7.472334 AACTAAGACTCGGACTATTGGTTTA 57.528 36.000 0.00 0.00 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.