Multiple sequence alignment - TraesCS6A01G135900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G135900 chr6A 100.000 2216 0 0 1 2216 107264599 107262384 0.000000e+00 4093.0
1 TraesCS6A01G135900 chr6A 99.720 357 1 0 1860 2216 107265847 107266203 0.000000e+00 654.0
2 TraesCS6A01G135900 chr7A 91.017 1091 85 9 778 1855 627045827 627046917 0.000000e+00 1459.0
3 TraesCS6A01G135900 chr7A 91.569 854 68 3 1004 1855 580505038 580505889 0.000000e+00 1175.0
4 TraesCS6A01G135900 chr7A 88.283 990 85 12 780 1757 628386399 628387369 0.000000e+00 1157.0
5 TraesCS6A01G135900 chr7A 88.397 655 63 9 775 1418 627120012 627120664 0.000000e+00 776.0
6 TraesCS6A01G135900 chr7A 98.324 358 5 1 1860 2216 628384482 628384125 5.190000e-176 627.0
7 TraesCS6A01G135900 chr7A 77.715 884 145 33 977 1855 628358546 628359382 5.500000e-136 494.0
8 TraesCS6A01G135900 chr7A 78.212 358 30 22 12 331 628385671 628386018 3.760000e-43 185.0
9 TraesCS6A01G135900 chr7A 90.580 138 13 0 626 763 627119895 627120032 1.350000e-42 183.0
10 TraesCS6A01G135900 chr7A 79.585 289 25 9 12 271 627008478 627008761 2.260000e-40 176.0
11 TraesCS6A01G135900 chr7A 93.617 47 3 0 254 300 627008687 627008733 1.100000e-08 71.3
12 TraesCS6A01G135900 chr1B 90.943 1071 84 9 798 1855 133111996 133113066 0.000000e+00 1428.0
13 TraesCS6A01G135900 chr1B 89.800 1098 95 10 775 1855 426497571 426498668 0.000000e+00 1391.0
14 TraesCS6A01G135900 chr1B 97.207 358 8 2 1860 2216 133110089 133109733 2.430000e-169 604.0
15 TraesCS6A01G135900 chr1B 81.034 348 20 11 23 345 133123933 133124259 3.680000e-58 235.0
16 TraesCS6A01G135900 chr1B 90.511 137 13 0 626 762 426497454 426497590 4.860000e-42 182.0
17 TraesCS6A01G135900 chr1B 89.051 137 15 0 626 762 426482489 426482625 1.050000e-38 171.0
18 TraesCS6A01G135900 chr1B 100.000 32 0 0 494 525 133124583 133124614 2.380000e-05 60.2
19 TraesCS6A01G135900 chr5D 91.473 1032 70 8 835 1855 289421520 289422544 0.000000e+00 1402.0
20 TraesCS6A01G135900 chr5D 91.496 929 67 8 938 1855 289727721 289728648 0.000000e+00 1267.0
21 TraesCS6A01G135900 chr5D 98.324 358 5 1 1860 2216 289353841 289353484 5.190000e-176 627.0
22 TraesCS6A01G135900 chr5D 98.324 358 5 1 1860 2216 289419648 289419291 5.190000e-176 627.0
23 TraesCS6A01G135900 chr5D 82.263 327 33 12 23 333 289355102 289355419 2.180000e-65 259.0
24 TraesCS6A01G135900 chr5D 79.643 280 35 13 12 271 289420906 289421183 4.860000e-42 182.0
25 TraesCS6A01G135900 chr5D 79.286 280 36 13 12 271 289726950 289727227 2.260000e-40 176.0
26 TraesCS6A01G135900 chr5D 78.039 255 19 12 26 243 29876252 29876506 2.310000e-25 126.0
27 TraesCS6A01G135900 chr5D 91.667 84 5 2 679 762 289496764 289496845 5.000000e-22 115.0
28 TraesCS6A01G135900 chr5D 90.698 86 8 0 621 706 289727491 289727576 5.000000e-22 115.0
29 TraesCS6A01G135900 chr5D 91.803 61 4 1 647 706 289421457 289421517 1.410000e-12 84.2
30 TraesCS6A01G135900 chr5D 100.000 32 0 0 494 525 289355741 289355772 2.380000e-05 60.2
31 TraesCS6A01G135900 chr7B 89.972 1087 89 13 782 1855 588878988 588880067 0.000000e+00 1386.0
32 TraesCS6A01G135900 chr7B 98.045 358 6 1 1860 2216 589694859 589694502 2.420000e-174 621.0
33 TraesCS6A01G135900 chr7B 98.045 358 6 1 1860 2216 589736747 589737104 2.420000e-174 621.0
34 TraesCS6A01G135900 chr7B 97.486 358 7 2 1860 2216 588876839 588876483 5.230000e-171 610.0
35 TraesCS6A01G135900 chr7B 97.207 358 9 1 1860 2216 588822069 588821712 2.430000e-169 604.0
36 TraesCS6A01G135900 chr7B 82.270 282 30 12 9 271 588823254 588823534 2.210000e-55 226.0
37 TraesCS6A01G135900 chr7B 79.730 370 30 13 1 345 588878017 588878366 2.210000e-55 226.0
38 TraesCS6A01G135900 chr7B 78.238 386 25 26 1 345 589920174 589919807 2.250000e-45 193.0
39 TraesCS6A01G135900 chr7B 88.435 147 11 4 1 144 589696031 589696174 2.930000e-39 172.0
40 TraesCS6A01G135900 chr7B 79.044 272 27 9 1 247 537825441 537825707 2.280000e-35 159.0
41 TraesCS6A01G135900 chr7B 86.014 143 12 4 629 763 589734918 589734776 1.770000e-31 147.0
42 TraesCS6A01G135900 chr7B 92.157 102 8 0 142 243 498300025 498300126 6.380000e-31 145.0
43 TraesCS6A01G135900 chr7B 95.000 80 4 0 626 705 588823803 588823882 2.310000e-25 126.0
44 TraesCS6A01G135900 chr7B 90.411 73 3 2 273 345 498300103 498300171 2.340000e-15 93.5
45 TraesCS6A01G135900 chr7B 97.727 44 1 0 257 300 589919944 589919901 2.360000e-10 76.8
46 TraesCS6A01G135900 chr7B 100.000 32 0 0 494 525 588878606 588878637 2.380000e-05 60.2
47 TraesCS6A01G135900 chr2B 92.081 884 61 5 836 1715 182134298 182135176 0.000000e+00 1236.0
48 TraesCS6A01G135900 chr2B 82.657 271 15 7 12 250 127789940 127790210 6.200000e-51 211.0
49 TraesCS6A01G135900 chr2B 88.811 143 16 0 621 763 182134137 182134279 2.260000e-40 176.0
50 TraesCS6A01G135900 chr2B 87.413 143 18 0 621 763 127790472 127790614 4.900000e-37 165.0
51 TraesCS6A01G135900 chr2B 78.102 274 30 10 42 304 135512783 135512529 1.770000e-31 147.0
52 TraesCS6A01G135900 chr7D 84.825 257 15 6 15 248 545650688 545650433 1.020000e-58 237.0
53 TraesCS6A01G135900 chr7D 81.181 271 25 8 1 250 509598535 509598800 6.240000e-46 195.0
54 TraesCS6A01G135900 chr7D 78.986 276 31 12 1 250 509573593 509573867 1.760000e-36 163.0
55 TraesCS6A01G135900 chrUn 89.744 78 8 0 170 247 65755283 65755206 1.400000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G135900 chr6A 107262384 107264599 2215 True 4093.000000 4093 100.000000 1 2216 1 chr6A.!!$R1 2215
1 TraesCS6A01G135900 chr7A 627045827 627046917 1090 False 1459.000000 1459 91.017000 778 1855 1 chr7A.!!$F2 1077
2 TraesCS6A01G135900 chr7A 580505038 580505889 851 False 1175.000000 1175 91.569000 1004 1855 1 chr7A.!!$F1 851
3 TraesCS6A01G135900 chr7A 628385671 628387369 1698 False 671.000000 1157 83.247500 12 1757 2 chr7A.!!$F6 1745
4 TraesCS6A01G135900 chr7A 628358546 628359382 836 False 494.000000 494 77.715000 977 1855 1 chr7A.!!$F3 878
5 TraesCS6A01G135900 chr7A 627119895 627120664 769 False 479.500000 776 89.488500 626 1418 2 chr7A.!!$F5 792
6 TraesCS6A01G135900 chr1B 133111996 133113066 1070 False 1428.000000 1428 90.943000 798 1855 1 chr1B.!!$F1 1057
7 TraesCS6A01G135900 chr1B 426497454 426498668 1214 False 786.500000 1391 90.155500 626 1855 2 chr1B.!!$F4 1229
8 TraesCS6A01G135900 chr5D 289420906 289422544 1638 False 556.066667 1402 87.639667 12 1855 3 chr5D.!!$F4 1843
9 TraesCS6A01G135900 chr5D 289726950 289728648 1698 False 519.333333 1267 87.160000 12 1855 3 chr5D.!!$F5 1843
10 TraesCS6A01G135900 chr7B 588878017 588880067 2050 False 557.400000 1386 89.900667 1 1855 3 chr7B.!!$F6 1854
11 TraesCS6A01G135900 chr2B 182134137 182135176 1039 False 706.000000 1236 90.446000 621 1715 2 chr2B.!!$F2 1094

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
469 584 0.034059 CTCTCACCCTTGCGTCTGTT 59.966 55.0 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2163 2609 0.240945 GCATCACCACCCAAACGAAG 59.759 55.0 0.0 0.0 0.0 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
146 150 3.758133 GAGGGAGGCTGATCGGGGA 62.758 68.421 3.14 0.00 0.00 4.81
158 185 2.904178 ATCGGGGATTGGGGAAACGC 62.904 60.000 0.00 0.00 44.99 4.84
188 215 2.726822 AAAACAGGGACGCGGGAGAC 62.727 60.000 12.47 0.00 0.00 3.36
190 217 4.135153 CAGGGACGCGGGAGACAG 62.135 72.222 12.47 0.00 0.00 3.51
192 219 3.827898 GGGACGCGGGAGACAGAG 61.828 72.222 12.47 0.00 0.00 3.35
197 224 0.322277 ACGCGGGAGACAGAGAAGTA 60.322 55.000 12.47 0.00 0.00 2.24
271 321 3.114668 TGGTTTTTGAATCCGAGTCGA 57.885 42.857 15.64 0.07 0.00 4.20
272 322 3.468770 TGGTTTTTGAATCCGAGTCGAA 58.531 40.909 15.64 0.00 0.00 3.71
273 323 3.496884 TGGTTTTTGAATCCGAGTCGAAG 59.503 43.478 15.64 0.00 0.00 3.79
274 324 3.497262 GGTTTTTGAATCCGAGTCGAAGT 59.503 43.478 15.64 0.00 0.00 3.01
275 325 4.377124 GGTTTTTGAATCCGAGTCGAAGTC 60.377 45.833 15.64 2.31 0.00 3.01
276 326 2.257974 TTGAATCCGAGTCGAAGTCG 57.742 50.000 15.64 10.71 40.53 4.18
331 381 5.006386 AGAGACTCGGATTCAAATTGCTTT 58.994 37.500 0.00 0.00 0.00 3.51
333 383 5.006386 AGACTCGGATTCAAATTGCTTTCT 58.994 37.500 0.00 0.00 0.00 2.52
334 384 6.173339 AGACTCGGATTCAAATTGCTTTCTA 58.827 36.000 0.00 0.00 0.00 2.10
335 385 6.825721 AGACTCGGATTCAAATTGCTTTCTAT 59.174 34.615 0.00 0.00 0.00 1.98
345 395 8.181904 TCAAATTGCTTTCTATCTTTCCAACT 57.818 30.769 0.00 0.00 0.00 3.16
346 396 9.295825 TCAAATTGCTTTCTATCTTTCCAACTA 57.704 29.630 0.00 0.00 0.00 2.24
347 397 9.565213 CAAATTGCTTTCTATCTTTCCAACTAG 57.435 33.333 0.00 0.00 0.00 2.57
348 398 6.743575 TTGCTTTCTATCTTTCCAACTAGC 57.256 37.500 0.00 0.00 0.00 3.42
349 399 4.870426 TGCTTTCTATCTTTCCAACTAGCG 59.130 41.667 0.00 0.00 0.00 4.26
350 400 4.260415 GCTTTCTATCTTTCCAACTAGCGC 60.260 45.833 0.00 0.00 0.00 5.92
351 401 4.465632 TTCTATCTTTCCAACTAGCGCA 57.534 40.909 11.47 0.00 0.00 6.09
370 485 1.688772 AGGCATGCATGTCTGAATCC 58.311 50.000 32.11 19.42 41.98 3.01
371 486 0.309922 GGCATGCATGTCTGAATCCG 59.690 55.000 26.79 0.00 0.00 4.18
372 487 1.302366 GCATGCATGTCTGAATCCGA 58.698 50.000 26.79 0.00 0.00 4.55
375 490 2.299993 TGCATGTCTGAATCCGAGTC 57.700 50.000 0.00 0.00 0.00 3.36
376 491 1.134699 TGCATGTCTGAATCCGAGTCC 60.135 52.381 0.00 0.00 0.00 3.85
377 492 1.134699 GCATGTCTGAATCCGAGTCCA 60.135 52.381 0.00 0.00 0.00 4.02
378 493 2.819115 CATGTCTGAATCCGAGTCCAG 58.181 52.381 0.00 0.00 0.00 3.86
379 494 1.186200 TGTCTGAATCCGAGTCCAGG 58.814 55.000 0.00 0.00 0.00 4.45
381 496 0.614697 TCTGAATCCGAGTCCAGGCA 60.615 55.000 0.00 0.00 0.00 4.75
382 497 0.467384 CTGAATCCGAGTCCAGGCAT 59.533 55.000 0.00 0.00 0.00 4.40
384 499 2.103094 CTGAATCCGAGTCCAGGCATAA 59.897 50.000 0.00 0.00 0.00 1.90
385 500 2.158957 TGAATCCGAGTCCAGGCATAAC 60.159 50.000 0.00 0.00 0.00 1.89
389 504 3.305720 TCCGAGTCCAGGCATAACTAAT 58.694 45.455 0.00 0.00 0.00 1.73
400 515 6.774656 CCAGGCATAACTAATTCCTCAGAAAT 59.225 38.462 0.00 0.00 35.09 2.17
402 517 7.718753 CAGGCATAACTAATTCCTCAGAAATCT 59.281 37.037 0.00 0.00 35.09 2.40
403 518 8.938883 AGGCATAACTAATTCCTCAGAAATCTA 58.061 33.333 0.00 0.00 35.09 1.98
414 529 9.972106 ATTCCTCAGAAATCTAAAATCAGTTCT 57.028 29.630 0.00 0.00 35.09 3.01
415 530 9.442047 TTCCTCAGAAATCTAAAATCAGTTCTC 57.558 33.333 0.00 0.00 0.00 2.87
416 531 8.043710 TCCTCAGAAATCTAAAATCAGTTCTCC 58.956 37.037 0.00 0.00 0.00 3.71
417 532 8.046107 CCTCAGAAATCTAAAATCAGTTCTCCT 58.954 37.037 0.00 0.00 0.00 3.69
418 533 8.783833 TCAGAAATCTAAAATCAGTTCTCCTG 57.216 34.615 0.00 0.00 42.97 3.86
419 534 7.335422 TCAGAAATCTAAAATCAGTTCTCCTGC 59.665 37.037 0.00 0.00 41.25 4.85
420 535 6.601217 AGAAATCTAAAATCAGTTCTCCTGCC 59.399 38.462 0.00 0.00 41.25 4.85
422 537 4.836825 TCTAAAATCAGTTCTCCTGCCAG 58.163 43.478 0.00 0.00 41.25 4.85
423 538 3.795688 AAAATCAGTTCTCCTGCCAGA 57.204 42.857 0.00 0.00 41.25 3.86
424 539 3.795688 AAATCAGTTCTCCTGCCAGAA 57.204 42.857 0.00 0.00 41.25 3.02
425 540 3.795688 AATCAGTTCTCCTGCCAGAAA 57.204 42.857 0.00 0.00 41.25 2.52
427 542 3.340814 TCAGTTCTCCTGCCAGAAATC 57.659 47.619 0.00 0.00 41.25 2.17
428 543 2.909006 TCAGTTCTCCTGCCAGAAATCT 59.091 45.455 0.00 0.00 41.25 2.40
429 544 4.096681 TCAGTTCTCCTGCCAGAAATCTA 58.903 43.478 0.00 0.00 41.25 1.98
430 545 4.532126 TCAGTTCTCCTGCCAGAAATCTAA 59.468 41.667 0.00 0.00 41.25 2.10
431 546 5.013079 TCAGTTCTCCTGCCAGAAATCTAAA 59.987 40.000 0.00 0.00 41.25 1.85
432 547 5.707298 CAGTTCTCCTGCCAGAAATCTAAAA 59.293 40.000 0.00 0.00 34.11 1.52
433 548 6.376581 CAGTTCTCCTGCCAGAAATCTAAAAT 59.623 38.462 0.00 0.00 34.11 1.82
437 552 4.400251 TCCTGCCAGAAATCTAAAATGCAG 59.600 41.667 0.00 0.00 43.37 4.41
438 553 4.400251 CCTGCCAGAAATCTAAAATGCAGA 59.600 41.667 9.53 0.00 45.84 4.26
439 554 5.105635 CCTGCCAGAAATCTAAAATGCAGAA 60.106 40.000 9.53 0.00 45.84 3.02
440 555 5.713025 TGCCAGAAATCTAAAATGCAGAAC 58.287 37.500 0.00 0.00 0.00 3.01
441 556 5.477984 TGCCAGAAATCTAAAATGCAGAACT 59.522 36.000 0.00 0.00 0.00 3.01
445 560 7.543520 CCAGAAATCTAAAATGCAGAACTTTCC 59.456 37.037 0.00 0.00 28.07 3.13
446 561 8.084073 CAGAAATCTAAAATGCAGAACTTTCCA 58.916 33.333 0.00 0.00 28.07 3.53
447 562 8.084684 AGAAATCTAAAATGCAGAACTTTCCAC 58.915 33.333 0.00 0.00 28.07 4.02
449 564 6.959639 TCTAAAATGCAGAACTTTCCACTT 57.040 33.333 0.00 0.00 0.00 3.16
450 565 6.970484 TCTAAAATGCAGAACTTTCCACTTC 58.030 36.000 0.00 0.00 0.00 3.01
451 566 5.859205 AAAATGCAGAACTTTCCACTTCT 57.141 34.783 0.00 0.00 0.00 2.85
452 567 5.444663 AAATGCAGAACTTTCCACTTCTC 57.555 39.130 0.00 0.00 0.00 2.87
453 568 3.845781 TGCAGAACTTTCCACTTCTCT 57.154 42.857 0.00 0.00 0.00 3.10
454 569 3.733337 TGCAGAACTTTCCACTTCTCTC 58.267 45.455 0.00 0.00 0.00 3.20
455 570 3.134623 TGCAGAACTTTCCACTTCTCTCA 59.865 43.478 0.00 0.00 0.00 3.27
456 571 3.496507 GCAGAACTTTCCACTTCTCTCAC 59.503 47.826 0.00 0.00 0.00 3.51
457 572 4.061596 CAGAACTTTCCACTTCTCTCACC 58.938 47.826 0.00 0.00 0.00 4.02
459 574 2.695585 ACTTTCCACTTCTCTCACCCT 58.304 47.619 0.00 0.00 0.00 4.34
460 575 3.049344 ACTTTCCACTTCTCTCACCCTT 58.951 45.455 0.00 0.00 0.00 3.95
461 576 3.181450 ACTTTCCACTTCTCTCACCCTTG 60.181 47.826 0.00 0.00 0.00 3.61
462 577 0.687354 TCCACTTCTCTCACCCTTGC 59.313 55.000 0.00 0.00 0.00 4.01
463 578 0.671781 CCACTTCTCTCACCCTTGCG 60.672 60.000 0.00 0.00 0.00 4.85
466 581 0.605589 CTTCTCTCACCCTTGCGTCT 59.394 55.000 0.00 0.00 0.00 4.18
468 583 0.827925 TCTCTCACCCTTGCGTCTGT 60.828 55.000 0.00 0.00 0.00 3.41
469 584 0.034059 CTCTCACCCTTGCGTCTGTT 59.966 55.000 0.00 0.00 0.00 3.16
470 585 0.468226 TCTCACCCTTGCGTCTGTTT 59.532 50.000 0.00 0.00 0.00 2.83
471 586 0.868406 CTCACCCTTGCGTCTGTTTC 59.132 55.000 0.00 0.00 0.00 2.78
472 587 0.468226 TCACCCTTGCGTCTGTTTCT 59.532 50.000 0.00 0.00 0.00 2.52
473 588 1.689813 TCACCCTTGCGTCTGTTTCTA 59.310 47.619 0.00 0.00 0.00 2.10
474 589 2.103432 TCACCCTTGCGTCTGTTTCTAA 59.897 45.455 0.00 0.00 0.00 2.10
476 591 2.104281 ACCCTTGCGTCTGTTTCTAACT 59.896 45.455 0.00 0.00 0.00 2.24
477 592 2.480419 CCCTTGCGTCTGTTTCTAACTG 59.520 50.000 0.00 0.00 0.00 3.16
478 593 3.390135 CCTTGCGTCTGTTTCTAACTGA 58.610 45.455 0.00 0.00 37.07 3.41
479 594 3.807622 CCTTGCGTCTGTTTCTAACTGAA 59.192 43.478 0.00 0.00 40.36 3.02
480 595 4.272504 CCTTGCGTCTGTTTCTAACTGAAA 59.727 41.667 0.00 0.00 40.36 2.69
489 604 4.781775 TTTCTAACTGAAACCCTGTCCA 57.218 40.909 0.00 0.00 39.50 4.02
490 605 3.764237 TCTAACTGAAACCCTGTCCAC 57.236 47.619 0.00 0.00 0.00 4.02
492 607 2.348411 AACTGAAACCCTGTCCACTG 57.652 50.000 0.00 0.00 0.00 3.66
547 784 7.468357 GCATCAAGGTCTTATTTCAATCCAGAG 60.468 40.741 0.00 0.00 0.00 3.35
557 794 3.701205 TCAATCCAGAGCAGCACTTAA 57.299 42.857 0.00 0.00 0.00 1.85
558 795 3.338249 TCAATCCAGAGCAGCACTTAAC 58.662 45.455 0.00 0.00 0.00 2.01
559 796 2.409948 ATCCAGAGCAGCACTTAACC 57.590 50.000 0.00 0.00 0.00 2.85
560 797 1.055849 TCCAGAGCAGCACTTAACCA 58.944 50.000 0.00 0.00 0.00 3.67
562 799 0.801251 CAGAGCAGCACTTAACCAGC 59.199 55.000 0.00 0.00 0.00 4.85
574 818 5.564651 GCACTTAACCAGCATGTGTTTGTAT 60.565 40.000 0.00 0.00 32.92 2.29
581 825 4.221342 CAGCATGTGTTTGTATGTGTGTC 58.779 43.478 0.00 0.00 0.00 3.67
587 831 2.877786 TGTTTGTATGTGTGTCCAGCTG 59.122 45.455 6.78 6.78 0.00 4.24
591 835 0.036105 TATGTGTGTCCAGCTGCAGG 60.036 55.000 17.12 4.46 0.00 4.85
594 844 2.740055 GTGTCCAGCTGCAGGTCG 60.740 66.667 17.16 10.29 0.00 4.79
601 851 1.073216 CAGCTGCAGGTCGTAACTCG 61.073 60.000 17.16 0.00 41.41 4.18
605 855 0.892358 TGCAGGTCGTAACTCGGAGT 60.892 55.000 4.45 4.45 40.32 3.85
612 862 2.225019 GTCGTAACTCGGAGTTCTGTGA 59.775 50.000 25.51 15.90 39.51 3.58
617 867 1.338200 ACTCGGAGTTCTGTGATTGCC 60.338 52.381 4.45 0.00 0.00 4.52
622 938 0.877071 AGTTCTGTGATTGCCGCTTG 59.123 50.000 0.00 0.00 0.00 4.01
691 1007 5.287674 TGATCTCAGAAACCTGATGATCC 57.712 43.478 19.67 10.76 40.20 3.36
729 1045 2.831565 AGATCCCTATCTCTGGATGCC 58.168 52.381 0.00 0.00 41.44 4.40
739 1055 2.170397 TCTCTGGATGCCGCAGAAAATA 59.830 45.455 0.00 0.00 0.00 1.40
740 1056 2.547211 CTCTGGATGCCGCAGAAAATAG 59.453 50.000 0.00 0.00 0.00 1.73
744 1060 2.033424 GGATGCCGCAGAAAATAGGAAC 59.967 50.000 0.00 0.00 0.00 3.62
748 1064 2.227865 GCCGCAGAAAATAGGAACAACA 59.772 45.455 0.00 0.00 0.00 3.33
749 1065 3.305064 GCCGCAGAAAATAGGAACAACAA 60.305 43.478 0.00 0.00 0.00 2.83
758 1074 9.883142 AGAAAATAGGAACAACAAAACATGAAA 57.117 25.926 0.00 0.00 0.00 2.69
759 1075 9.914923 GAAAATAGGAACAACAAAACATGAAAC 57.085 29.630 0.00 0.00 0.00 2.78
761 1077 9.612066 AAATAGGAACAACAAAACATGAAACAT 57.388 25.926 0.00 0.00 0.00 2.71
764 1080 5.236263 GGAACAACAAAACATGAAACATCCC 59.764 40.000 0.00 0.00 0.00 3.85
765 1081 4.702831 ACAACAAAACATGAAACATCCCC 58.297 39.130 0.00 0.00 0.00 4.81
768 1084 1.626686 AAACATGAAACATCCCCGCA 58.373 45.000 0.00 0.00 0.00 5.69
772 1088 2.366916 ACATGAAACATCCCCGCAAAAA 59.633 40.909 0.00 0.00 0.00 1.94
806 1147 3.181826 TGAAACATCGCACGTTGAATC 57.818 42.857 8.01 6.17 0.00 2.52
833 1176 4.517285 TGTAGCTGATGGAAAATCAGTCC 58.483 43.478 14.89 5.91 45.38 3.85
935 1318 4.139038 GCCGTAAAAAGCCCATAATCCTA 58.861 43.478 0.00 0.00 0.00 2.94
1011 1443 3.381949 CGGGTCTAGAATGATTCGAACC 58.618 50.000 0.00 14.33 32.88 3.62
1012 1444 3.381949 GGGTCTAGAATGATTCGAACCG 58.618 50.000 0.00 0.00 33.79 4.44
1022 1454 0.665369 ATTCGAACCGTGGTCGACAC 60.665 55.000 18.91 12.39 46.78 3.67
1066 1498 6.074088 CGTTATGTCTATTGTCCTGCTTGATC 60.074 42.308 0.00 0.00 0.00 2.92
1093 1525 2.931969 ACGTATGTCGATGTCGTGTCTA 59.068 45.455 2.04 0.00 42.86 2.59
1113 1545 1.378514 GTCGGCACACCCATGGATT 60.379 57.895 15.22 0.00 0.00 3.01
1114 1546 1.378382 TCGGCACACCCATGGATTG 60.378 57.895 15.22 12.57 0.00 2.67
1217 1649 2.539432 TCTGCTGGATCTTCCTGAGA 57.461 50.000 4.78 2.79 37.65 3.27
1218 1650 2.386779 TCTGCTGGATCTTCCTGAGAG 58.613 52.381 4.78 0.64 37.65 3.20
1258 1690 1.413382 GCATCTCGTTATCTCAGCGG 58.587 55.000 0.00 0.00 0.00 5.52
1269 1701 5.233988 GTTATCTCAGCGGCTTCATATCTT 58.766 41.667 0.00 0.00 0.00 2.40
1506 1945 0.824109 CAGTATCCCCTCGCTTGTCA 59.176 55.000 0.00 0.00 0.00 3.58
1563 2002 1.205893 ACCAAAACGCCAAAGCTGAAA 59.794 42.857 0.00 0.00 36.60 2.69
1629 2072 2.623416 AGCCTTGTAACCACTGAAAAGC 59.377 45.455 0.00 0.00 0.00 3.51
1690 2134 3.756082 AGGCAAAATGGTGGGAATCTA 57.244 42.857 0.00 0.00 0.00 1.98
1855 2301 3.136443 TGGTTTCAAGTCTCTGTGGACAT 59.864 43.478 0.00 0.00 38.57 3.06
1856 2302 4.346709 TGGTTTCAAGTCTCTGTGGACATA 59.653 41.667 0.00 0.00 38.57 2.29
1857 2303 5.163248 TGGTTTCAAGTCTCTGTGGACATAA 60.163 40.000 0.00 0.00 38.57 1.90
1858 2304 5.940470 GGTTTCAAGTCTCTGTGGACATAAT 59.060 40.000 0.00 0.00 38.57 1.28
1859 2305 6.128172 GGTTTCAAGTCTCTGTGGACATAATG 60.128 42.308 0.00 0.00 38.57 1.90
1860 2306 5.745312 TCAAGTCTCTGTGGACATAATGT 57.255 39.130 0.00 0.00 38.57 2.71
1861 2307 5.724328 TCAAGTCTCTGTGGACATAATGTC 58.276 41.667 0.00 0.00 46.23 3.06
1874 2320 6.715344 GACATAATGTCGTGGTGAGTTAAA 57.285 37.500 0.00 0.00 37.67 1.52
1875 2321 6.721571 ACATAATGTCGTGGTGAGTTAAAG 57.278 37.500 0.00 0.00 0.00 1.85
1876 2322 6.228258 ACATAATGTCGTGGTGAGTTAAAGT 58.772 36.000 0.00 0.00 0.00 2.66
1877 2323 6.708949 ACATAATGTCGTGGTGAGTTAAAGTT 59.291 34.615 0.00 0.00 0.00 2.66
1878 2324 5.418310 AATGTCGTGGTGAGTTAAAGTTG 57.582 39.130 0.00 0.00 0.00 3.16
1879 2325 2.610374 TGTCGTGGTGAGTTAAAGTTGC 59.390 45.455 0.00 0.00 0.00 4.17
1880 2326 2.610374 GTCGTGGTGAGTTAAAGTTGCA 59.390 45.455 0.00 0.00 0.00 4.08
1881 2327 2.869801 TCGTGGTGAGTTAAAGTTGCAG 59.130 45.455 0.00 0.00 0.00 4.41
1882 2328 2.612212 CGTGGTGAGTTAAAGTTGCAGT 59.388 45.455 0.00 0.00 0.00 4.40
1883 2329 3.064820 CGTGGTGAGTTAAAGTTGCAGTT 59.935 43.478 0.00 0.00 0.00 3.16
1884 2330 4.438200 CGTGGTGAGTTAAAGTTGCAGTTT 60.438 41.667 2.13 2.13 0.00 2.66
1885 2331 5.034797 GTGGTGAGTTAAAGTTGCAGTTTC 58.965 41.667 0.00 0.00 0.00 2.78
1886 2332 4.947388 TGGTGAGTTAAAGTTGCAGTTTCT 59.053 37.500 0.00 0.00 0.00 2.52
1887 2333 5.163663 TGGTGAGTTAAAGTTGCAGTTTCTG 60.164 40.000 0.00 0.00 34.12 3.02
1888 2334 5.065988 GGTGAGTTAAAGTTGCAGTTTCTGA 59.934 40.000 0.66 0.00 32.44 3.27
1889 2335 5.965918 GTGAGTTAAAGTTGCAGTTTCTGAC 59.034 40.000 0.66 0.10 32.44 3.51
1890 2336 5.156804 AGTTAAAGTTGCAGTTTCTGACG 57.843 39.130 0.66 0.00 32.44 4.35
1891 2337 4.873827 AGTTAAAGTTGCAGTTTCTGACGA 59.126 37.500 0.66 0.00 32.44 4.20
1892 2338 3.951979 AAAGTTGCAGTTTCTGACGAG 57.048 42.857 0.66 0.00 32.44 4.18
1893 2339 2.604046 AGTTGCAGTTTCTGACGAGT 57.396 45.000 0.66 0.00 32.44 4.18
1894 2340 3.728076 AGTTGCAGTTTCTGACGAGTA 57.272 42.857 0.66 0.00 32.44 2.59
1895 2341 3.643763 AGTTGCAGTTTCTGACGAGTAG 58.356 45.455 0.66 0.00 32.44 2.57
1896 2342 2.065993 TGCAGTTTCTGACGAGTAGC 57.934 50.000 0.66 0.00 32.44 3.58
1897 2343 1.339929 TGCAGTTTCTGACGAGTAGCA 59.660 47.619 0.66 0.00 32.44 3.49
1898 2344 2.029020 TGCAGTTTCTGACGAGTAGCAT 60.029 45.455 0.66 0.00 32.44 3.79
1899 2345 2.996621 GCAGTTTCTGACGAGTAGCATT 59.003 45.455 0.66 0.00 32.44 3.56
1900 2346 3.181526 GCAGTTTCTGACGAGTAGCATTG 60.182 47.826 0.66 0.00 32.44 2.82
1901 2347 3.369147 CAGTTTCTGACGAGTAGCATTGG 59.631 47.826 0.00 0.00 32.44 3.16
1902 2348 3.006967 AGTTTCTGACGAGTAGCATTGGT 59.993 43.478 0.00 0.00 0.00 3.67
1903 2349 3.678056 TTCTGACGAGTAGCATTGGTT 57.322 42.857 0.00 0.00 0.00 3.67
1904 2350 2.959516 TCTGACGAGTAGCATTGGTTG 58.040 47.619 0.00 0.00 0.00 3.77
1905 2351 2.002586 CTGACGAGTAGCATTGGTTGG 58.997 52.381 0.00 0.00 0.00 3.77
1906 2352 1.346395 TGACGAGTAGCATTGGTTGGT 59.654 47.619 0.00 0.00 39.88 3.67
1907 2353 1.732259 GACGAGTAGCATTGGTTGGTG 59.268 52.381 0.00 0.00 37.26 4.17
1908 2354 1.346395 ACGAGTAGCATTGGTTGGTGA 59.654 47.619 0.00 0.00 37.26 4.02
1909 2355 2.224426 ACGAGTAGCATTGGTTGGTGAA 60.224 45.455 0.00 0.00 37.26 3.18
1910 2356 2.159627 CGAGTAGCATTGGTTGGTGAAC 59.840 50.000 0.00 0.00 37.26 3.18
1911 2357 3.412386 GAGTAGCATTGGTTGGTGAACT 58.588 45.455 0.00 0.00 37.26 3.01
1912 2358 3.412386 AGTAGCATTGGTTGGTGAACTC 58.588 45.455 0.00 0.00 37.26 3.01
1913 2359 2.664402 AGCATTGGTTGGTGAACTCT 57.336 45.000 0.00 0.00 33.95 3.24
1914 2360 2.949447 AGCATTGGTTGGTGAACTCTT 58.051 42.857 0.00 0.00 33.95 2.85
1915 2361 2.624838 AGCATTGGTTGGTGAACTCTTG 59.375 45.455 0.00 0.00 33.95 3.02
1916 2362 2.362077 GCATTGGTTGGTGAACTCTTGT 59.638 45.455 0.00 0.00 32.15 3.16
1917 2363 3.796504 GCATTGGTTGGTGAACTCTTGTG 60.797 47.826 0.00 0.00 32.15 3.33
1918 2364 2.799126 TGGTTGGTGAACTCTTGTGT 57.201 45.000 0.00 0.00 32.15 3.72
1919 2365 2.364632 TGGTTGGTGAACTCTTGTGTG 58.635 47.619 0.00 0.00 32.15 3.82
1920 2366 2.290641 TGGTTGGTGAACTCTTGTGTGT 60.291 45.455 0.00 0.00 32.15 3.72
1921 2367 3.055021 TGGTTGGTGAACTCTTGTGTGTA 60.055 43.478 0.00 0.00 32.15 2.90
1922 2368 4.134563 GGTTGGTGAACTCTTGTGTGTAT 58.865 43.478 0.00 0.00 32.15 2.29
1923 2369 4.024048 GGTTGGTGAACTCTTGTGTGTATG 60.024 45.833 0.00 0.00 32.15 2.39
1924 2370 4.415881 TGGTGAACTCTTGTGTGTATGT 57.584 40.909 0.00 0.00 0.00 2.29
1925 2371 4.126437 TGGTGAACTCTTGTGTGTATGTG 58.874 43.478 0.00 0.00 0.00 3.21
1926 2372 4.127171 GGTGAACTCTTGTGTGTATGTGT 58.873 43.478 0.00 0.00 0.00 3.72
1927 2373 4.024893 GGTGAACTCTTGTGTGTATGTGTG 60.025 45.833 0.00 0.00 0.00 3.82
1928 2374 4.808895 GTGAACTCTTGTGTGTATGTGTGA 59.191 41.667 0.00 0.00 0.00 3.58
1929 2375 5.049828 TGAACTCTTGTGTGTATGTGTGAG 58.950 41.667 0.00 0.00 0.00 3.51
1930 2376 4.672587 ACTCTTGTGTGTATGTGTGAGT 57.327 40.909 0.00 0.00 0.00 3.41
1931 2377 4.371786 ACTCTTGTGTGTATGTGTGAGTG 58.628 43.478 0.00 0.00 33.09 3.51
1932 2378 4.099419 ACTCTTGTGTGTATGTGTGAGTGA 59.901 41.667 0.00 0.00 33.09 3.41
1933 2379 5.017294 TCTTGTGTGTATGTGTGAGTGAA 57.983 39.130 0.00 0.00 0.00 3.18
1934 2380 5.049828 TCTTGTGTGTATGTGTGAGTGAAG 58.950 41.667 0.00 0.00 0.00 3.02
1935 2381 3.130633 TGTGTGTATGTGTGAGTGAAGC 58.869 45.455 0.00 0.00 0.00 3.86
1936 2382 3.181466 TGTGTGTATGTGTGAGTGAAGCT 60.181 43.478 0.00 0.00 0.00 3.74
1937 2383 3.809832 GTGTGTATGTGTGAGTGAAGCTT 59.190 43.478 0.00 0.00 0.00 3.74
1938 2384 4.273480 GTGTGTATGTGTGAGTGAAGCTTT 59.727 41.667 0.00 0.00 0.00 3.51
1939 2385 4.273235 TGTGTATGTGTGAGTGAAGCTTTG 59.727 41.667 0.00 0.00 0.00 2.77
1940 2386 4.511454 GTGTATGTGTGAGTGAAGCTTTGA 59.489 41.667 0.00 0.00 0.00 2.69
1941 2387 4.751600 TGTATGTGTGAGTGAAGCTTTGAG 59.248 41.667 0.00 0.00 0.00 3.02
1942 2388 1.942657 TGTGTGAGTGAAGCTTTGAGC 59.057 47.619 0.00 0.00 42.84 4.26
1956 2402 4.416505 CTTTGAGCTAAGCAAGTCCTTG 57.583 45.455 2.63 2.63 43.14 3.61
1957 2403 3.769739 TTGAGCTAAGCAAGTCCTTGA 57.230 42.857 11.12 0.00 42.93 3.02
1958 2404 3.988976 TGAGCTAAGCAAGTCCTTGAT 57.011 42.857 11.12 1.24 42.93 2.57
1959 2405 3.603532 TGAGCTAAGCAAGTCCTTGATG 58.396 45.455 11.12 0.00 42.93 3.07
1960 2406 3.008375 TGAGCTAAGCAAGTCCTTGATGT 59.992 43.478 11.12 0.00 42.93 3.06
1961 2407 4.222810 TGAGCTAAGCAAGTCCTTGATGTA 59.777 41.667 11.12 0.54 42.93 2.29
1962 2408 4.508662 AGCTAAGCAAGTCCTTGATGTAC 58.491 43.478 11.12 0.00 42.93 2.90
1963 2409 3.623510 GCTAAGCAAGTCCTTGATGTACC 59.376 47.826 11.12 0.00 42.93 3.34
1964 2410 2.386661 AGCAAGTCCTTGATGTACCG 57.613 50.000 11.12 0.00 42.93 4.02
1965 2411 1.899814 AGCAAGTCCTTGATGTACCGA 59.100 47.619 11.12 0.00 42.93 4.69
1966 2412 2.000447 GCAAGTCCTTGATGTACCGAC 59.000 52.381 11.12 0.00 42.93 4.79
1967 2413 2.353803 GCAAGTCCTTGATGTACCGACT 60.354 50.000 11.12 0.00 42.93 4.18
1968 2414 3.119245 GCAAGTCCTTGATGTACCGACTA 60.119 47.826 11.12 0.00 42.93 2.59
1969 2415 4.441634 GCAAGTCCTTGATGTACCGACTAT 60.442 45.833 11.12 0.00 42.93 2.12
1970 2416 5.282510 CAAGTCCTTGATGTACCGACTATC 58.717 45.833 0.61 0.00 42.93 2.08
1971 2417 4.533815 AGTCCTTGATGTACCGACTATCA 58.466 43.478 0.00 0.00 32.15 2.15
1972 2418 4.954202 AGTCCTTGATGTACCGACTATCAA 59.046 41.667 5.68 5.68 38.20 2.57
2015 2461 9.656040 TTTGGATATGAATGAGAAAATTGTTGG 57.344 29.630 0.00 0.00 0.00 3.77
2016 2462 8.365060 TGGATATGAATGAGAAAATTGTTGGT 57.635 30.769 0.00 0.00 0.00 3.67
2017 2463 8.469200 TGGATATGAATGAGAAAATTGTTGGTC 58.531 33.333 0.00 0.00 0.00 4.02
2018 2464 8.689972 GGATATGAATGAGAAAATTGTTGGTCT 58.310 33.333 0.00 0.00 0.00 3.85
2019 2465 9.512435 GATATGAATGAGAAAATTGTTGGTCTG 57.488 33.333 0.00 0.00 0.00 3.51
2020 2466 6.957920 TGAATGAGAAAATTGTTGGTCTGA 57.042 33.333 0.00 0.00 0.00 3.27
2021 2467 7.345422 TGAATGAGAAAATTGTTGGTCTGAA 57.655 32.000 0.00 0.00 0.00 3.02
2022 2468 7.954835 TGAATGAGAAAATTGTTGGTCTGAAT 58.045 30.769 0.00 0.00 0.00 2.57
2023 2469 8.423349 TGAATGAGAAAATTGTTGGTCTGAATT 58.577 29.630 0.00 0.00 0.00 2.17
2024 2470 9.264719 GAATGAGAAAATTGTTGGTCTGAATTT 57.735 29.630 0.00 0.00 32.01 1.82
2025 2471 9.617523 AATGAGAAAATTGTTGGTCTGAATTTT 57.382 25.926 0.00 0.00 40.35 1.82
2026 2472 8.422973 TGAGAAAATTGTTGGTCTGAATTTTG 57.577 30.769 0.00 0.00 38.68 2.44
2027 2473 7.011295 TGAGAAAATTGTTGGTCTGAATTTTGC 59.989 33.333 0.00 0.00 38.68 3.68
2028 2474 6.822676 AGAAAATTGTTGGTCTGAATTTTGCA 59.177 30.769 0.00 0.00 38.68 4.08
2029 2475 6.607735 AAATTGTTGGTCTGAATTTTGCAG 57.392 33.333 0.00 0.00 34.71 4.41
2030 2476 4.998671 TTGTTGGTCTGAATTTTGCAGA 57.001 36.364 0.00 0.00 39.90 4.26
2031 2477 4.572985 TGTTGGTCTGAATTTTGCAGAG 57.427 40.909 0.00 0.00 42.57 3.35
2037 2483 5.511088 GTCTGAATTTTGCAGAGCATTTG 57.489 39.130 0.00 0.00 42.57 2.32
2038 2484 5.224888 GTCTGAATTTTGCAGAGCATTTGA 58.775 37.500 0.00 0.00 42.57 2.69
2039 2485 5.345202 GTCTGAATTTTGCAGAGCATTTGAG 59.655 40.000 0.00 0.00 42.57 3.02
2040 2486 5.010314 TCTGAATTTTGCAGAGCATTTGAGT 59.990 36.000 0.00 0.00 38.76 3.41
2041 2487 6.207221 TCTGAATTTTGCAGAGCATTTGAGTA 59.793 34.615 0.00 0.00 38.76 2.59
2042 2488 6.747125 TGAATTTTGCAGAGCATTTGAGTAA 58.253 32.000 0.00 0.00 38.76 2.24
2043 2489 7.380536 TGAATTTTGCAGAGCATTTGAGTAAT 58.619 30.769 0.00 0.00 38.76 1.89
2044 2490 7.543172 TGAATTTTGCAGAGCATTTGAGTAATC 59.457 33.333 0.00 0.00 38.76 1.75
2045 2491 6.579666 TTTTGCAGAGCATTTGAGTAATCT 57.420 33.333 0.00 0.00 38.76 2.40
2046 2492 6.579666 TTTGCAGAGCATTTGAGTAATCTT 57.420 33.333 0.00 0.00 38.76 2.40
2047 2493 6.579666 TTGCAGAGCATTTGAGTAATCTTT 57.420 33.333 0.00 0.00 38.76 2.52
2048 2494 6.579666 TGCAGAGCATTTGAGTAATCTTTT 57.420 33.333 0.00 0.00 31.71 2.27
2049 2495 6.615088 TGCAGAGCATTTGAGTAATCTTTTC 58.385 36.000 0.00 0.00 31.71 2.29
2050 2496 5.736358 GCAGAGCATTTGAGTAATCTTTTCG 59.264 40.000 0.00 0.00 0.00 3.46
2051 2497 6.621596 GCAGAGCATTTGAGTAATCTTTTCGT 60.622 38.462 0.00 0.00 0.00 3.85
2052 2498 7.413000 GCAGAGCATTTGAGTAATCTTTTCGTA 60.413 37.037 0.00 0.00 0.00 3.43
2053 2499 8.607459 CAGAGCATTTGAGTAATCTTTTCGTAT 58.393 33.333 0.00 0.00 0.00 3.06
2054 2500 8.821894 AGAGCATTTGAGTAATCTTTTCGTATC 58.178 33.333 0.00 0.00 0.00 2.24
2055 2501 8.723942 AGCATTTGAGTAATCTTTTCGTATCT 57.276 30.769 0.00 0.00 0.00 1.98
2056 2502 9.817809 AGCATTTGAGTAATCTTTTCGTATCTA 57.182 29.630 0.00 0.00 0.00 1.98
2079 2525 9.330063 TCTATTTATTCTTGTATGCTTCTGTGG 57.670 33.333 0.00 0.00 0.00 4.17
2080 2526 5.818136 TTATTCTTGTATGCTTCTGTGGC 57.182 39.130 0.00 0.00 0.00 5.01
2081 2527 3.423539 TTCTTGTATGCTTCTGTGGCT 57.576 42.857 0.00 0.00 0.00 4.75
2082 2528 3.423539 TCTTGTATGCTTCTGTGGCTT 57.576 42.857 0.00 0.00 0.00 4.35
2083 2529 3.338249 TCTTGTATGCTTCTGTGGCTTC 58.662 45.455 0.00 0.00 0.00 3.86
2084 2530 3.008375 TCTTGTATGCTTCTGTGGCTTCT 59.992 43.478 0.00 0.00 0.00 2.85
2085 2531 3.423539 TGTATGCTTCTGTGGCTTCTT 57.576 42.857 0.00 0.00 0.00 2.52
2086 2532 4.551702 TGTATGCTTCTGTGGCTTCTTA 57.448 40.909 0.00 0.00 0.00 2.10
2087 2533 4.905429 TGTATGCTTCTGTGGCTTCTTAA 58.095 39.130 0.00 0.00 0.00 1.85
2088 2534 5.312895 TGTATGCTTCTGTGGCTTCTTAAA 58.687 37.500 0.00 0.00 0.00 1.52
2089 2535 5.412594 TGTATGCTTCTGTGGCTTCTTAAAG 59.587 40.000 0.00 0.00 35.47 1.85
2108 2554 1.207390 GCATTCTGCTGCTCTAGTCG 58.793 55.000 0.00 0.00 40.96 4.18
2109 2555 1.850377 CATTCTGCTGCTCTAGTCGG 58.150 55.000 0.00 0.00 0.00 4.79
2110 2556 1.406898 CATTCTGCTGCTCTAGTCGGA 59.593 52.381 0.00 0.00 0.00 4.55
2111 2557 1.545841 TTCTGCTGCTCTAGTCGGAA 58.454 50.000 0.00 0.00 0.00 4.30
2112 2558 1.545841 TCTGCTGCTCTAGTCGGAAA 58.454 50.000 0.00 0.00 0.00 3.13
2113 2559 1.893137 TCTGCTGCTCTAGTCGGAAAA 59.107 47.619 0.00 0.00 0.00 2.29
2114 2560 2.094494 TCTGCTGCTCTAGTCGGAAAAG 60.094 50.000 0.00 0.00 0.00 2.27
2115 2561 1.618837 TGCTGCTCTAGTCGGAAAAGT 59.381 47.619 0.00 0.00 0.00 2.66
2116 2562 1.996191 GCTGCTCTAGTCGGAAAAGTG 59.004 52.381 0.00 0.00 0.00 3.16
2117 2563 2.610727 GCTGCTCTAGTCGGAAAAGTGT 60.611 50.000 0.00 0.00 0.00 3.55
2118 2564 2.989840 CTGCTCTAGTCGGAAAAGTGTG 59.010 50.000 0.00 0.00 0.00 3.82
2119 2565 2.364324 TGCTCTAGTCGGAAAAGTGTGT 59.636 45.455 0.00 0.00 0.00 3.72
2120 2566 3.570975 TGCTCTAGTCGGAAAAGTGTGTA 59.429 43.478 0.00 0.00 0.00 2.90
2121 2567 3.919197 GCTCTAGTCGGAAAAGTGTGTAC 59.081 47.826 0.00 0.00 0.00 2.90
2122 2568 4.321082 GCTCTAGTCGGAAAAGTGTGTACT 60.321 45.833 0.00 0.00 39.32 2.73
2123 2569 5.117355 TCTAGTCGGAAAAGTGTGTACTG 57.883 43.478 0.00 0.00 37.19 2.74
2124 2570 4.823442 TCTAGTCGGAAAAGTGTGTACTGA 59.177 41.667 0.00 0.00 37.19 3.41
2125 2571 3.978687 AGTCGGAAAAGTGTGTACTGAG 58.021 45.455 0.00 0.00 37.19 3.35
2126 2572 3.057734 GTCGGAAAAGTGTGTACTGAGG 58.942 50.000 0.00 0.00 37.19 3.86
2127 2573 1.798813 CGGAAAAGTGTGTACTGAGGC 59.201 52.381 0.00 0.00 37.19 4.70
2128 2574 2.805295 CGGAAAAGTGTGTACTGAGGCA 60.805 50.000 0.00 0.00 37.19 4.75
2129 2575 2.808543 GGAAAAGTGTGTACTGAGGCAG 59.191 50.000 0.00 0.00 37.19 4.85
2130 2576 3.494398 GGAAAAGTGTGTACTGAGGCAGA 60.494 47.826 0.82 0.00 37.19 4.26
2131 2577 3.393089 AAAGTGTGTACTGAGGCAGAG 57.607 47.619 0.82 0.00 37.19 3.35
2132 2578 2.294449 AGTGTGTACTGAGGCAGAGA 57.706 50.000 0.82 0.00 35.34 3.10
2133 2579 2.813907 AGTGTGTACTGAGGCAGAGAT 58.186 47.619 0.82 0.00 35.34 2.75
2134 2580 2.757868 AGTGTGTACTGAGGCAGAGATC 59.242 50.000 0.82 0.00 35.34 2.75
2135 2581 2.103373 TGTGTACTGAGGCAGAGATCC 58.897 52.381 0.82 0.00 35.18 3.36
2136 2582 2.103373 GTGTACTGAGGCAGAGATCCA 58.897 52.381 0.82 0.00 35.18 3.41
2137 2583 2.497675 GTGTACTGAGGCAGAGATCCAA 59.502 50.000 0.82 0.00 35.18 3.53
2138 2584 3.133721 GTGTACTGAGGCAGAGATCCAAT 59.866 47.826 0.82 0.00 35.18 3.16
2139 2585 3.133542 TGTACTGAGGCAGAGATCCAATG 59.866 47.826 0.82 0.00 35.18 2.82
2140 2586 1.489649 ACTGAGGCAGAGATCCAATGG 59.510 52.381 0.82 0.00 35.18 3.16
2141 2587 1.767088 CTGAGGCAGAGATCCAATGGA 59.233 52.381 3.67 3.67 32.15 3.41
2142 2588 2.372504 CTGAGGCAGAGATCCAATGGAT 59.627 50.000 15.71 15.71 38.28 3.41
2143 2589 2.781757 TGAGGCAGAGATCCAATGGATT 59.218 45.455 16.90 6.45 43.27 3.01
2144 2590 3.181447 TGAGGCAGAGATCCAATGGATTC 60.181 47.826 16.90 14.59 43.27 2.52
2145 2591 2.781757 AGGCAGAGATCCAATGGATTCA 59.218 45.455 16.90 0.00 43.27 2.57
2146 2592 3.398292 AGGCAGAGATCCAATGGATTCAT 59.602 43.478 16.90 5.78 43.27 2.57
2147 2593 3.757493 GGCAGAGATCCAATGGATTCATC 59.243 47.826 16.90 14.17 43.27 2.92
2148 2594 4.506979 GGCAGAGATCCAATGGATTCATCT 60.507 45.833 16.90 16.03 43.27 2.90
2149 2595 4.696402 GCAGAGATCCAATGGATTCATCTC 59.304 45.833 16.90 17.71 43.27 2.75
2150 2596 5.513441 GCAGAGATCCAATGGATTCATCTCT 60.513 44.000 21.36 21.36 43.27 3.10
2151 2597 5.935206 CAGAGATCCAATGGATTCATCTCTG 59.065 44.000 30.48 30.48 46.44 3.35
2152 2598 5.845065 AGAGATCCAATGGATTCATCTCTGA 59.155 40.000 24.55 0.00 43.27 3.27
2153 2599 6.502510 AGAGATCCAATGGATTCATCTCTGAT 59.497 38.462 24.55 8.16 43.27 2.90
2154 2600 7.017750 AGAGATCCAATGGATTCATCTCTGATT 59.982 37.037 24.55 7.88 43.27 2.57
2155 2601 7.527796 AGATCCAATGGATTCATCTCTGATTT 58.472 34.615 16.90 0.00 43.27 2.17
2156 2602 7.666388 AGATCCAATGGATTCATCTCTGATTTC 59.334 37.037 16.90 0.00 43.27 2.17
2157 2603 6.665695 TCCAATGGATTCATCTCTGATTTCA 58.334 36.000 0.00 0.00 32.24 2.69
2158 2604 6.544931 TCCAATGGATTCATCTCTGATTTCAC 59.455 38.462 0.00 0.00 32.24 3.18
2159 2605 6.320418 CCAATGGATTCATCTCTGATTTCACA 59.680 38.462 0.00 0.00 32.24 3.58
2160 2606 7.147966 CCAATGGATTCATCTCTGATTTCACAA 60.148 37.037 0.00 0.00 32.24 3.33
2161 2607 8.414003 CAATGGATTCATCTCTGATTTCACAAT 58.586 33.333 0.00 0.00 32.24 2.71
2162 2608 9.636789 AATGGATTCATCTCTGATTTCACAATA 57.363 29.630 0.00 0.00 32.24 1.90
2163 2609 8.442632 TGGATTCATCTCTGATTTCACAATAC 57.557 34.615 0.00 0.00 0.00 1.89
2164 2610 8.270030 TGGATTCATCTCTGATTTCACAATACT 58.730 33.333 0.00 0.00 0.00 2.12
2165 2611 9.118300 GGATTCATCTCTGATTTCACAATACTT 57.882 33.333 0.00 0.00 0.00 2.24
2167 2613 7.761651 TCATCTCTGATTTCACAATACTTCG 57.238 36.000 0.00 0.00 0.00 3.79
2168 2614 7.323420 TCATCTCTGATTTCACAATACTTCGT 58.677 34.615 0.00 0.00 0.00 3.85
2169 2615 7.819415 TCATCTCTGATTTCACAATACTTCGTT 59.181 33.333 0.00 0.00 0.00 3.85
2170 2616 7.962964 TCTCTGATTTCACAATACTTCGTTT 57.037 32.000 0.00 0.00 0.00 3.60
2171 2617 7.796838 TCTCTGATTTCACAATACTTCGTTTG 58.203 34.615 0.00 0.00 0.00 2.93
2172 2618 6.898041 TCTGATTTCACAATACTTCGTTTGG 58.102 36.000 0.00 0.00 0.00 3.28
2173 2619 6.007936 TGATTTCACAATACTTCGTTTGGG 57.992 37.500 0.00 0.00 0.00 4.12
2174 2620 5.533154 TGATTTCACAATACTTCGTTTGGGT 59.467 36.000 0.00 0.00 0.00 4.51
2175 2621 4.822036 TTCACAATACTTCGTTTGGGTG 57.178 40.909 0.00 0.00 0.00 4.61
2176 2622 3.142951 TCACAATACTTCGTTTGGGTGG 58.857 45.455 0.00 0.00 0.00 4.61
2177 2623 2.882137 CACAATACTTCGTTTGGGTGGT 59.118 45.455 0.00 0.00 0.00 4.16
2178 2624 2.882137 ACAATACTTCGTTTGGGTGGTG 59.118 45.455 0.00 0.00 0.00 4.17
2179 2625 3.142951 CAATACTTCGTTTGGGTGGTGA 58.857 45.455 0.00 0.00 0.00 4.02
2180 2626 3.713826 ATACTTCGTTTGGGTGGTGAT 57.286 42.857 0.00 0.00 0.00 3.06
2181 2627 1.604604 ACTTCGTTTGGGTGGTGATG 58.395 50.000 0.00 0.00 0.00 3.07
2182 2628 0.240945 CTTCGTTTGGGTGGTGATGC 59.759 55.000 0.00 0.00 0.00 3.91
2183 2629 0.466372 TTCGTTTGGGTGGTGATGCA 60.466 50.000 0.00 0.00 0.00 3.96
2184 2630 1.169661 TCGTTTGGGTGGTGATGCAC 61.170 55.000 0.00 0.00 0.00 4.57
2185 2631 1.451337 CGTTTGGGTGGTGATGCACA 61.451 55.000 0.00 0.00 35.86 4.57
2186 2632 0.968405 GTTTGGGTGGTGATGCACAT 59.032 50.000 0.00 0.00 35.86 3.21
2187 2633 2.166829 GTTTGGGTGGTGATGCACATA 58.833 47.619 0.00 0.00 35.86 2.29
2188 2634 2.560542 GTTTGGGTGGTGATGCACATAA 59.439 45.455 0.00 0.00 35.86 1.90
2189 2635 1.832883 TGGGTGGTGATGCACATAAC 58.167 50.000 0.00 0.00 35.86 1.89
2190 2636 1.102978 GGGTGGTGATGCACATAACC 58.897 55.000 9.92 9.92 41.85 2.85
2194 2640 3.084536 TGGTGATGCACATAACCATGT 57.915 42.857 14.83 0.00 45.32 3.21
2195 2641 3.429492 TGGTGATGCACATAACCATGTT 58.571 40.909 14.83 0.00 45.32 2.71
2196 2642 3.443329 TGGTGATGCACATAACCATGTTC 59.557 43.478 14.83 0.00 45.32 3.18
2197 2643 3.487376 GGTGATGCACATAACCATGTTCG 60.487 47.826 11.71 0.00 42.98 3.95
2198 2644 2.682352 TGATGCACATAACCATGTTCGG 59.318 45.455 0.00 0.00 42.98 4.30
2199 2645 2.481289 TGCACATAACCATGTTCGGA 57.519 45.000 0.00 0.00 42.98 4.55
2200 2646 2.784347 TGCACATAACCATGTTCGGAA 58.216 42.857 0.00 0.00 42.98 4.30
2201 2647 3.149981 TGCACATAACCATGTTCGGAAA 58.850 40.909 0.00 0.00 42.98 3.13
2202 2648 3.570125 TGCACATAACCATGTTCGGAAAA 59.430 39.130 0.00 0.00 42.98 2.29
2203 2649 4.165779 GCACATAACCATGTTCGGAAAAG 58.834 43.478 0.00 0.00 42.98 2.27
2204 2650 4.083003 GCACATAACCATGTTCGGAAAAGA 60.083 41.667 0.00 0.00 42.98 2.52
2205 2651 5.631026 CACATAACCATGTTCGGAAAAGAG 58.369 41.667 0.00 0.00 42.98 2.85
2206 2652 5.181245 CACATAACCATGTTCGGAAAAGAGT 59.819 40.000 0.00 0.00 42.98 3.24
2207 2653 6.370442 CACATAACCATGTTCGGAAAAGAGTA 59.630 38.462 0.00 0.00 42.98 2.59
2208 2654 6.938030 ACATAACCATGTTCGGAAAAGAGTAA 59.062 34.615 0.00 0.00 42.98 2.24
2209 2655 5.684550 AACCATGTTCGGAAAAGAGTAAC 57.315 39.130 0.00 0.00 0.00 2.50
2210 2656 4.969484 ACCATGTTCGGAAAAGAGTAACT 58.031 39.130 0.00 0.00 0.00 2.24
2211 2657 6.105397 ACCATGTTCGGAAAAGAGTAACTA 57.895 37.500 0.00 0.00 0.00 2.24
2212 2658 6.164176 ACCATGTTCGGAAAAGAGTAACTAG 58.836 40.000 0.00 0.00 0.00 2.57
2213 2659 6.164176 CCATGTTCGGAAAAGAGTAACTAGT 58.836 40.000 0.00 0.00 0.00 2.57
2214 2660 6.310711 CCATGTTCGGAAAAGAGTAACTAGTC 59.689 42.308 0.00 0.00 0.00 2.59
2215 2661 6.395426 TGTTCGGAAAAGAGTAACTAGTCA 57.605 37.500 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 1.805539 CGTTGCTCTCGCGATTCCA 60.806 57.895 10.36 3.70 39.65 3.53
81 82 1.299468 GGATCGTTGCTCTCGCGAT 60.299 57.895 10.36 0.00 46.25 4.58
83 84 3.315521 CGGATCGTTGCTCTCGCG 61.316 66.667 0.00 0.00 39.65 5.87
85 86 2.956964 GCCGGATCGTTGCTCTCG 60.957 66.667 5.05 0.00 0.00 4.04
86 87 2.956964 CGCCGGATCGTTGCTCTC 60.957 66.667 5.05 0.00 0.00 3.20
146 150 4.708386 TCGCCGCGTTTCCCCAAT 62.708 61.111 13.39 0.00 0.00 3.16
158 185 1.207593 CCTGTTTTCTTGCTCGCCG 59.792 57.895 0.00 0.00 0.00 6.46
188 215 0.390340 TGCTTGCCGCTACTTCTCTG 60.390 55.000 0.00 0.00 40.11 3.35
190 217 1.373570 ATTGCTTGCCGCTACTTCTC 58.626 50.000 0.00 0.00 40.11 2.87
192 219 2.095263 TCAAATTGCTTGCCGCTACTTC 60.095 45.455 0.00 0.00 40.11 3.01
197 224 1.404583 GGATTCAAATTGCTTGCCGCT 60.405 47.619 0.00 0.00 40.11 5.52
236 274 2.113910 AACCAAAGTGCGCGTTTTAG 57.886 45.000 8.43 1.49 0.00 1.85
273 323 3.772853 TATGCATGCCTGGGCCGAC 62.773 63.158 16.68 0.00 41.09 4.79
274 324 3.480679 CTATGCATGCCTGGGCCGA 62.481 63.158 16.68 0.00 41.09 5.54
275 325 2.981909 CTATGCATGCCTGGGCCG 60.982 66.667 16.68 1.63 41.09 6.13
276 326 2.416107 TAGCTATGCATGCCTGGGCC 62.416 60.000 16.68 0.00 41.09 5.80
331 381 3.181475 CCTGCGCTAGTTGGAAAGATAGA 60.181 47.826 9.73 0.00 0.00 1.98
333 383 2.741878 GCCTGCGCTAGTTGGAAAGATA 60.742 50.000 9.73 0.00 0.00 1.98
334 384 2.014068 GCCTGCGCTAGTTGGAAAGAT 61.014 52.381 9.73 0.00 0.00 2.40
335 385 0.673644 GCCTGCGCTAGTTGGAAAGA 60.674 55.000 9.73 0.00 0.00 2.52
350 400 1.337071 GGATTCAGACATGCATGCCTG 59.663 52.381 30.67 30.67 39.29 4.85
351 401 1.688772 GGATTCAGACATGCATGCCT 58.311 50.000 26.53 18.73 0.00 4.75
358 473 2.482664 CCTGGACTCGGATTCAGACATG 60.483 54.545 0.00 0.00 0.00 3.21
370 485 4.058817 GGAATTAGTTATGCCTGGACTCG 58.941 47.826 0.00 0.00 0.00 4.18
371 486 5.163301 TGAGGAATTAGTTATGCCTGGACTC 60.163 44.000 0.00 0.00 42.99 3.36
372 487 4.721776 TGAGGAATTAGTTATGCCTGGACT 59.278 41.667 0.00 0.00 42.99 3.85
375 490 5.296151 TCTGAGGAATTAGTTATGCCTGG 57.704 43.478 0.00 0.00 42.99 4.45
376 491 7.718753 AGATTTCTGAGGAATTAGTTATGCCTG 59.281 37.037 0.00 0.00 42.99 4.85
377 492 7.810260 AGATTTCTGAGGAATTAGTTATGCCT 58.190 34.615 0.00 0.00 45.95 4.75
378 493 9.561069 TTAGATTTCTGAGGAATTAGTTATGCC 57.439 33.333 0.00 0.00 31.00 4.40
389 504 9.442047 GAGAACTGATTTTAGATTTCTGAGGAA 57.558 33.333 0.00 0.00 0.00 3.36
410 525 6.558909 CATTTTAGATTTCTGGCAGGAGAAC 58.441 40.000 15.73 1.29 31.53 3.01
411 526 5.126061 GCATTTTAGATTTCTGGCAGGAGAA 59.874 40.000 15.73 7.92 0.00 2.87
413 528 4.400251 TGCATTTTAGATTTCTGGCAGGAG 59.600 41.667 15.73 0.00 0.00 3.69
414 529 4.343231 TGCATTTTAGATTTCTGGCAGGA 58.657 39.130 15.73 1.78 0.00 3.86
415 530 4.400251 TCTGCATTTTAGATTTCTGGCAGG 59.600 41.667 15.73 0.00 45.49 4.85
416 531 5.571784 TCTGCATTTTAGATTTCTGGCAG 57.428 39.130 8.58 8.58 46.49 4.85
417 532 5.477984 AGTTCTGCATTTTAGATTTCTGGCA 59.522 36.000 0.00 0.00 0.00 4.92
418 533 5.958955 AGTTCTGCATTTTAGATTTCTGGC 58.041 37.500 0.00 0.00 0.00 4.85
419 534 7.543520 GGAAAGTTCTGCATTTTAGATTTCTGG 59.456 37.037 0.00 0.00 29.97 3.86
420 535 8.084073 TGGAAAGTTCTGCATTTTAGATTTCTG 58.916 33.333 0.00 0.00 29.97 3.02
422 537 8.084684 AGTGGAAAGTTCTGCATTTTAGATTTC 58.915 33.333 0.00 0.00 0.00 2.17
423 538 7.955918 AGTGGAAAGTTCTGCATTTTAGATTT 58.044 30.769 0.00 0.00 0.00 2.17
424 539 7.530426 AGTGGAAAGTTCTGCATTTTAGATT 57.470 32.000 0.00 0.00 0.00 2.40
425 540 7.449704 AGAAGTGGAAAGTTCTGCATTTTAGAT 59.550 33.333 0.00 0.00 31.63 1.98
427 542 6.974965 AGAAGTGGAAAGTTCTGCATTTTAG 58.025 36.000 0.00 0.00 31.63 1.85
428 543 6.772716 AGAGAAGTGGAAAGTTCTGCATTTTA 59.227 34.615 0.65 0.00 33.04 1.52
429 544 5.595952 AGAGAAGTGGAAAGTTCTGCATTTT 59.404 36.000 0.65 0.00 33.04 1.82
430 545 5.136105 AGAGAAGTGGAAAGTTCTGCATTT 58.864 37.500 0.65 0.00 33.04 2.32
431 546 4.723309 AGAGAAGTGGAAAGTTCTGCATT 58.277 39.130 0.65 0.00 33.04 3.56
432 547 4.202398 TGAGAGAAGTGGAAAGTTCTGCAT 60.202 41.667 0.65 0.00 33.04 3.96
433 548 3.134623 TGAGAGAAGTGGAAAGTTCTGCA 59.865 43.478 0.65 0.00 33.04 4.41
437 552 3.071747 AGGGTGAGAGAAGTGGAAAGTTC 59.928 47.826 0.00 0.00 0.00 3.01
438 553 3.049344 AGGGTGAGAGAAGTGGAAAGTT 58.951 45.455 0.00 0.00 0.00 2.66
439 554 2.695585 AGGGTGAGAGAAGTGGAAAGT 58.304 47.619 0.00 0.00 0.00 2.66
440 555 3.406764 CAAGGGTGAGAGAAGTGGAAAG 58.593 50.000 0.00 0.00 0.00 2.62
441 556 2.487265 GCAAGGGTGAGAGAAGTGGAAA 60.487 50.000 0.00 0.00 0.00 3.13
445 560 0.034059 ACGCAAGGGTGAGAGAAGTG 59.966 55.000 0.00 0.00 46.39 3.16
446 561 0.318762 GACGCAAGGGTGAGAGAAGT 59.681 55.000 0.00 0.00 46.39 3.01
447 562 0.605589 AGACGCAAGGGTGAGAGAAG 59.394 55.000 0.00 0.00 46.39 2.85
449 564 0.827925 ACAGACGCAAGGGTGAGAGA 60.828 55.000 0.00 0.00 46.39 3.10
450 565 0.034059 AACAGACGCAAGGGTGAGAG 59.966 55.000 0.00 0.00 46.39 3.20
451 566 0.468226 AAACAGACGCAAGGGTGAGA 59.532 50.000 0.00 0.00 46.39 3.27
452 567 0.868406 GAAACAGACGCAAGGGTGAG 59.132 55.000 0.00 0.00 46.39 3.51
453 568 0.468226 AGAAACAGACGCAAGGGTGA 59.532 50.000 0.00 0.00 46.39 4.02
454 569 2.163818 TAGAAACAGACGCAAGGGTG 57.836 50.000 0.00 0.00 46.39 4.61
455 570 2.104281 AGTTAGAAACAGACGCAAGGGT 59.896 45.455 0.00 0.00 46.39 4.34
456 571 2.480419 CAGTTAGAAACAGACGCAAGGG 59.520 50.000 0.00 0.00 46.39 3.95
457 572 3.390135 TCAGTTAGAAACAGACGCAAGG 58.610 45.455 0.00 0.00 46.39 3.61
468 583 4.165372 AGTGGACAGGGTTTCAGTTAGAAA 59.835 41.667 0.00 0.00 43.71 2.52
469 584 3.714798 AGTGGACAGGGTTTCAGTTAGAA 59.285 43.478 0.00 0.00 0.00 2.10
470 585 3.071023 CAGTGGACAGGGTTTCAGTTAGA 59.929 47.826 0.00 0.00 0.00 2.10
471 586 3.403038 CAGTGGACAGGGTTTCAGTTAG 58.597 50.000 0.00 0.00 0.00 2.34
472 587 2.486548 GCAGTGGACAGGGTTTCAGTTA 60.487 50.000 0.00 0.00 0.00 2.24
473 588 1.750682 GCAGTGGACAGGGTTTCAGTT 60.751 52.381 0.00 0.00 0.00 3.16
474 589 0.179018 GCAGTGGACAGGGTTTCAGT 60.179 55.000 0.00 0.00 0.00 3.41
476 591 0.179020 CTGCAGTGGACAGGGTTTCA 60.179 55.000 5.25 0.00 0.00 2.69
477 592 0.108585 TCTGCAGTGGACAGGGTTTC 59.891 55.000 14.67 0.00 35.78 2.78
478 593 0.109342 CTCTGCAGTGGACAGGGTTT 59.891 55.000 14.67 0.00 35.78 3.27
479 594 1.056700 ACTCTGCAGTGGACAGGGTT 61.057 55.000 19.27 0.00 46.78 4.11
480 595 1.460305 ACTCTGCAGTGGACAGGGT 60.460 57.895 19.27 0.00 44.08 4.34
481 596 0.976641 TAACTCTGCAGTGGACAGGG 59.023 55.000 19.27 0.00 41.64 4.45
482 597 2.808543 GTTTAACTCTGCAGTGGACAGG 59.191 50.000 19.27 3.23 35.78 4.00
483 598 3.466836 TGTTTAACTCTGCAGTGGACAG 58.533 45.455 19.27 9.09 36.44 3.51
486 601 4.623932 AGATGTTTAACTCTGCAGTGGA 57.376 40.909 19.27 4.80 31.06 4.02
488 603 6.204688 TGGTTAAGATGTTTAACTCTGCAGTG 59.795 38.462 14.67 14.35 35.73 3.66
489 604 6.296026 TGGTTAAGATGTTTAACTCTGCAGT 58.704 36.000 14.67 0.00 35.73 4.40
490 605 6.621596 GCTGGTTAAGATGTTTAACTCTGCAG 60.622 42.308 7.63 7.63 35.73 4.41
492 607 5.181245 TGCTGGTTAAGATGTTTAACTCTGC 59.819 40.000 9.01 12.62 35.73 4.26
547 784 0.883833 ACATGCTGGTTAAGTGCTGC 59.116 50.000 0.00 0.00 0.00 5.25
557 794 3.004629 CACACATACAAACACATGCTGGT 59.995 43.478 0.00 0.00 0.00 4.00
558 795 3.004629 ACACACATACAAACACATGCTGG 59.995 43.478 0.00 0.00 0.00 4.85
559 796 4.221342 GACACACATACAAACACATGCTG 58.779 43.478 0.00 0.00 0.00 4.41
560 797 3.253188 GGACACACATACAAACACATGCT 59.747 43.478 0.00 0.00 0.00 3.79
562 799 4.786507 CTGGACACACATACAAACACATG 58.213 43.478 0.00 0.00 0.00 3.21
574 818 2.111669 CCTGCAGCTGGACACACA 59.888 61.111 17.12 2.34 0.00 3.72
581 825 0.737715 GAGTTACGACCTGCAGCTGG 60.738 60.000 17.12 16.57 0.00 4.85
587 831 0.243095 AACTCCGAGTTACGACCTGC 59.757 55.000 12.24 0.00 45.77 4.85
591 835 2.225019 TCACAGAACTCCGAGTTACGAC 59.775 50.000 13.85 1.95 45.77 4.34
594 844 3.368236 GCAATCACAGAACTCCGAGTTAC 59.632 47.826 13.85 7.94 38.80 2.50
601 851 0.674895 AGCGGCAATCACAGAACTCC 60.675 55.000 1.45 0.00 0.00 3.85
605 855 0.874390 GACAAGCGGCAATCACAGAA 59.126 50.000 1.45 0.00 0.00 3.02
612 862 3.059166 GTTCAATTTGACAAGCGGCAAT 58.941 40.909 1.45 0.00 0.00 3.56
617 867 2.409378 GGCATGTTCAATTTGACAAGCG 59.591 45.455 15.88 7.16 29.56 4.68
622 938 1.067635 AGCCGGCATGTTCAATTTGAC 60.068 47.619 31.54 0.00 0.00 3.18
691 1007 2.426522 TCTCGGAATCTTTGCAACCTG 58.573 47.619 0.00 0.00 0.00 4.00
694 1010 2.356069 GGGATCTCGGAATCTTTGCAAC 59.644 50.000 0.00 0.00 0.00 4.17
729 1045 5.746245 TGTTTTGTTGTTCCTATTTTCTGCG 59.254 36.000 0.00 0.00 0.00 5.18
739 1055 6.048509 GGATGTTTCATGTTTTGTTGTTCCT 58.951 36.000 0.00 0.00 0.00 3.36
740 1056 5.236263 GGGATGTTTCATGTTTTGTTGTTCC 59.764 40.000 0.00 0.00 0.00 3.62
744 1060 3.740321 CGGGGATGTTTCATGTTTTGTTG 59.260 43.478 0.00 0.00 0.00 3.33
748 1064 1.967066 TGCGGGGATGTTTCATGTTTT 59.033 42.857 0.00 0.00 0.00 2.43
749 1065 1.626686 TGCGGGGATGTTTCATGTTT 58.373 45.000 0.00 0.00 0.00 2.83
806 1147 6.198650 TGATTTTCCATCAGCTACATTGTG 57.801 37.500 0.00 0.00 0.00 3.33
1012 1444 1.373497 CAGCTCCAGTGTCGACCAC 60.373 63.158 14.12 11.25 44.89 4.16
1022 1454 2.159366 ACGATAACGAGTTCAGCTCCAG 60.159 50.000 0.00 0.00 41.10 3.86
1066 1498 1.949133 CATCGACATACGTGGGCCG 60.949 63.158 0.00 0.00 43.13 6.13
1093 1525 1.925285 ATCCATGGGTGTGCCGACAT 61.925 55.000 13.02 0.00 33.63 3.06
1217 1649 0.764890 TCAGGTGGCACTACTTTGCT 59.235 50.000 18.45 0.64 42.56 3.91
1218 1650 1.160137 CTCAGGTGGCACTACTTTGC 58.840 55.000 18.45 0.00 42.18 3.68
1258 1690 5.007724 CGTTGTTAGGGGAAAGATATGAAGC 59.992 44.000 0.00 0.00 0.00 3.86
1269 1701 1.279846 GTGGATCCGTTGTTAGGGGAA 59.720 52.381 7.39 0.00 32.71 3.97
1318 1750 4.043200 GTTTCAGGCCTGGCGCAC 62.043 66.667 32.23 18.73 40.31 5.34
1454 1893 5.134202 TGTACGAGATGTGAGTGAAATGT 57.866 39.130 0.00 0.00 0.00 2.71
1457 1896 5.447624 TCTTGTACGAGATGTGAGTGAAA 57.552 39.130 8.87 0.00 0.00 2.69
1506 1945 4.080526 AGTGGCCGAAAGAATACCATACTT 60.081 41.667 0.00 0.00 31.99 2.24
1563 2002 4.521130 TTACTCGCTGAAGACAGATGTT 57.479 40.909 0.00 0.00 46.03 2.71
1855 2301 5.049954 GCAACTTTAACTCACCACGACATTA 60.050 40.000 0.00 0.00 0.00 1.90
1856 2302 4.261031 GCAACTTTAACTCACCACGACATT 60.261 41.667 0.00 0.00 0.00 2.71
1857 2303 3.250040 GCAACTTTAACTCACCACGACAT 59.750 43.478 0.00 0.00 0.00 3.06
1858 2304 2.610374 GCAACTTTAACTCACCACGACA 59.390 45.455 0.00 0.00 0.00 4.35
1859 2305 2.610374 TGCAACTTTAACTCACCACGAC 59.390 45.455 0.00 0.00 0.00 4.34
1860 2306 2.869801 CTGCAACTTTAACTCACCACGA 59.130 45.455 0.00 0.00 0.00 4.35
1861 2307 2.612212 ACTGCAACTTTAACTCACCACG 59.388 45.455 0.00 0.00 0.00 4.94
1862 2308 4.632538 AACTGCAACTTTAACTCACCAC 57.367 40.909 0.00 0.00 0.00 4.16
1863 2309 4.947388 AGAAACTGCAACTTTAACTCACCA 59.053 37.500 0.00 0.00 0.00 4.17
1864 2310 5.065988 TCAGAAACTGCAACTTTAACTCACC 59.934 40.000 0.00 0.00 0.00 4.02
1865 2311 5.965918 GTCAGAAACTGCAACTTTAACTCAC 59.034 40.000 0.00 0.00 0.00 3.51
1866 2312 5.220586 CGTCAGAAACTGCAACTTTAACTCA 60.221 40.000 0.00 0.00 0.00 3.41
1867 2313 5.006358 TCGTCAGAAACTGCAACTTTAACTC 59.994 40.000 0.00 0.00 0.00 3.01
1868 2314 4.873827 TCGTCAGAAACTGCAACTTTAACT 59.126 37.500 0.00 0.00 0.00 2.24
1869 2315 5.151632 TCGTCAGAAACTGCAACTTTAAC 57.848 39.130 0.00 0.00 0.00 2.01
1870 2316 4.873827 ACTCGTCAGAAACTGCAACTTTAA 59.126 37.500 0.00 0.00 0.00 1.52
1871 2317 4.439057 ACTCGTCAGAAACTGCAACTTTA 58.561 39.130 0.00 0.00 0.00 1.85
1872 2318 3.270877 ACTCGTCAGAAACTGCAACTTT 58.729 40.909 0.00 0.00 0.00 2.66
1873 2319 2.906354 ACTCGTCAGAAACTGCAACTT 58.094 42.857 0.00 0.00 0.00 2.66
1874 2320 2.604046 ACTCGTCAGAAACTGCAACT 57.396 45.000 0.00 0.00 0.00 3.16
1875 2321 2.155924 GCTACTCGTCAGAAACTGCAAC 59.844 50.000 0.00 0.00 0.00 4.17
1876 2322 2.223947 TGCTACTCGTCAGAAACTGCAA 60.224 45.455 0.00 0.00 0.00 4.08
1877 2323 1.339929 TGCTACTCGTCAGAAACTGCA 59.660 47.619 0.00 0.00 0.00 4.41
1878 2324 2.065993 TGCTACTCGTCAGAAACTGC 57.934 50.000 0.00 0.00 0.00 4.40
1879 2325 3.369147 CCAATGCTACTCGTCAGAAACTG 59.631 47.826 0.00 0.00 0.00 3.16
1880 2326 3.006967 ACCAATGCTACTCGTCAGAAACT 59.993 43.478 0.00 0.00 0.00 2.66
1881 2327 3.326747 ACCAATGCTACTCGTCAGAAAC 58.673 45.455 0.00 0.00 0.00 2.78
1882 2328 3.678056 ACCAATGCTACTCGTCAGAAA 57.322 42.857 0.00 0.00 0.00 2.52
1883 2329 3.325870 CAACCAATGCTACTCGTCAGAA 58.674 45.455 0.00 0.00 0.00 3.02
1884 2330 2.353704 CCAACCAATGCTACTCGTCAGA 60.354 50.000 0.00 0.00 0.00 3.27
1885 2331 2.002586 CCAACCAATGCTACTCGTCAG 58.997 52.381 0.00 0.00 0.00 3.51
1886 2332 1.346395 ACCAACCAATGCTACTCGTCA 59.654 47.619 0.00 0.00 0.00 4.35
1887 2333 1.732259 CACCAACCAATGCTACTCGTC 59.268 52.381 0.00 0.00 0.00 4.20
1888 2334 1.346395 TCACCAACCAATGCTACTCGT 59.654 47.619 0.00 0.00 0.00 4.18
1889 2335 2.093306 TCACCAACCAATGCTACTCG 57.907 50.000 0.00 0.00 0.00 4.18
1890 2336 3.412386 AGTTCACCAACCAATGCTACTC 58.588 45.455 0.00 0.00 32.22 2.59
1891 2337 3.073062 AGAGTTCACCAACCAATGCTACT 59.927 43.478 0.00 0.00 32.22 2.57
1892 2338 3.412386 AGAGTTCACCAACCAATGCTAC 58.588 45.455 0.00 0.00 32.22 3.58
1893 2339 3.788227 AGAGTTCACCAACCAATGCTA 57.212 42.857 0.00 0.00 32.22 3.49
1894 2340 2.624838 CAAGAGTTCACCAACCAATGCT 59.375 45.455 0.00 0.00 32.22 3.79
1895 2341 2.362077 ACAAGAGTTCACCAACCAATGC 59.638 45.455 0.00 0.00 32.22 3.56
1896 2342 3.381272 ACACAAGAGTTCACCAACCAATG 59.619 43.478 0.00 0.00 32.22 2.82
1897 2343 3.381272 CACACAAGAGTTCACCAACCAAT 59.619 43.478 0.00 0.00 32.22 3.16
1898 2344 2.752354 CACACAAGAGTTCACCAACCAA 59.248 45.455 0.00 0.00 32.22 3.67
1899 2345 2.290641 ACACACAAGAGTTCACCAACCA 60.291 45.455 0.00 0.00 32.22 3.67
1900 2346 2.365582 ACACACAAGAGTTCACCAACC 58.634 47.619 0.00 0.00 32.22 3.77
1901 2347 4.574828 ACATACACACAAGAGTTCACCAAC 59.425 41.667 0.00 0.00 0.00 3.77
1902 2348 4.574421 CACATACACACAAGAGTTCACCAA 59.426 41.667 0.00 0.00 0.00 3.67
1903 2349 4.126437 CACATACACACAAGAGTTCACCA 58.874 43.478 0.00 0.00 0.00 4.17
1904 2350 4.024893 CACACATACACACAAGAGTTCACC 60.025 45.833 0.00 0.00 0.00 4.02
1905 2351 4.808895 TCACACATACACACAAGAGTTCAC 59.191 41.667 0.00 0.00 0.00 3.18
1906 2352 5.017294 TCACACATACACACAAGAGTTCA 57.983 39.130 0.00 0.00 0.00 3.18
1907 2353 5.050490 ACTCACACATACACACAAGAGTTC 58.950 41.667 0.00 0.00 31.61 3.01
1908 2354 4.811024 CACTCACACATACACACAAGAGTT 59.189 41.667 0.00 0.00 33.22 3.01
1909 2355 4.099419 TCACTCACACATACACACAAGAGT 59.901 41.667 0.00 0.00 35.66 3.24
1910 2356 4.620982 TCACTCACACATACACACAAGAG 58.379 43.478 0.00 0.00 0.00 2.85
1911 2357 4.664150 TCACTCACACATACACACAAGA 57.336 40.909 0.00 0.00 0.00 3.02
1912 2358 4.319046 GCTTCACTCACACATACACACAAG 60.319 45.833 0.00 0.00 0.00 3.16
1913 2359 3.559655 GCTTCACTCACACATACACACAA 59.440 43.478 0.00 0.00 0.00 3.33
1914 2360 3.130633 GCTTCACTCACACATACACACA 58.869 45.455 0.00 0.00 0.00 3.72
1915 2361 3.393800 AGCTTCACTCACACATACACAC 58.606 45.455 0.00 0.00 0.00 3.82
1916 2362 3.751479 AGCTTCACTCACACATACACA 57.249 42.857 0.00 0.00 0.00 3.72
1917 2363 4.511454 TCAAAGCTTCACTCACACATACAC 59.489 41.667 0.00 0.00 0.00 2.90
1918 2364 4.702831 TCAAAGCTTCACTCACACATACA 58.297 39.130 0.00 0.00 0.00 2.29
1919 2365 4.377841 GCTCAAAGCTTCACTCACACATAC 60.378 45.833 0.00 0.00 38.45 2.39
1920 2366 3.748048 GCTCAAAGCTTCACTCACACATA 59.252 43.478 0.00 0.00 38.45 2.29
1921 2367 2.551459 GCTCAAAGCTTCACTCACACAT 59.449 45.455 0.00 0.00 38.45 3.21
1922 2368 1.942657 GCTCAAAGCTTCACTCACACA 59.057 47.619 0.00 0.00 38.45 3.72
1923 2369 2.677559 GCTCAAAGCTTCACTCACAC 57.322 50.000 0.00 0.00 38.45 3.82
1935 2381 4.067896 TCAAGGACTTGCTTAGCTCAAAG 58.932 43.478 5.60 3.46 40.24 2.77
1936 2382 4.085357 TCAAGGACTTGCTTAGCTCAAA 57.915 40.909 5.60 0.00 40.24 2.69
1937 2383 3.769739 TCAAGGACTTGCTTAGCTCAA 57.230 42.857 5.60 0.00 40.24 3.02
1938 2384 3.008375 ACATCAAGGACTTGCTTAGCTCA 59.992 43.478 5.60 0.00 40.24 4.26
1939 2385 3.604582 ACATCAAGGACTTGCTTAGCTC 58.395 45.455 5.60 0.00 40.24 4.09
1940 2386 3.710209 ACATCAAGGACTTGCTTAGCT 57.290 42.857 5.60 0.00 40.24 3.32
1941 2387 3.623510 GGTACATCAAGGACTTGCTTAGC 59.376 47.826 7.18 0.00 40.24 3.09
1942 2388 3.865745 CGGTACATCAAGGACTTGCTTAG 59.134 47.826 7.18 0.50 40.24 2.18
1943 2389 3.512329 TCGGTACATCAAGGACTTGCTTA 59.488 43.478 7.18 0.00 40.24 3.09
1944 2390 2.301870 TCGGTACATCAAGGACTTGCTT 59.698 45.455 7.18 0.00 40.24 3.91
1945 2391 1.899814 TCGGTACATCAAGGACTTGCT 59.100 47.619 7.18 0.00 40.24 3.91
1946 2392 2.000447 GTCGGTACATCAAGGACTTGC 59.000 52.381 7.18 0.00 40.24 4.01
1947 2393 3.594603 AGTCGGTACATCAAGGACTTG 57.405 47.619 5.72 5.72 41.71 3.16
1948 2394 4.954202 TGATAGTCGGTACATCAAGGACTT 59.046 41.667 0.00 0.00 38.74 3.01
1949 2395 4.533815 TGATAGTCGGTACATCAAGGACT 58.466 43.478 0.00 0.00 40.72 3.85
1950 2396 4.913335 TGATAGTCGGTACATCAAGGAC 57.087 45.455 0.00 0.00 0.00 3.85
1951 2397 5.515797 CTTGATAGTCGGTACATCAAGGA 57.484 43.478 18.50 0.00 46.17 3.36
1989 2435 9.656040 CCAACAATTTTCTCATTCATATCCAAA 57.344 29.630 0.00 0.00 0.00 3.28
1990 2436 8.814931 ACCAACAATTTTCTCATTCATATCCAA 58.185 29.630 0.00 0.00 0.00 3.53
1991 2437 8.365060 ACCAACAATTTTCTCATTCATATCCA 57.635 30.769 0.00 0.00 0.00 3.41
1992 2438 8.689972 AGACCAACAATTTTCTCATTCATATCC 58.310 33.333 0.00 0.00 0.00 2.59
1993 2439 9.512435 CAGACCAACAATTTTCTCATTCATATC 57.488 33.333 0.00 0.00 0.00 1.63
1994 2440 9.246670 TCAGACCAACAATTTTCTCATTCATAT 57.753 29.630 0.00 0.00 0.00 1.78
1995 2441 8.634335 TCAGACCAACAATTTTCTCATTCATA 57.366 30.769 0.00 0.00 0.00 2.15
1996 2442 7.528996 TCAGACCAACAATTTTCTCATTCAT 57.471 32.000 0.00 0.00 0.00 2.57
1997 2443 6.957920 TCAGACCAACAATTTTCTCATTCA 57.042 33.333 0.00 0.00 0.00 2.57
1998 2444 8.822652 AATTCAGACCAACAATTTTCTCATTC 57.177 30.769 0.00 0.00 0.00 2.67
1999 2445 9.617523 AAAATTCAGACCAACAATTTTCTCATT 57.382 25.926 0.00 0.00 35.69 2.57
2000 2446 9.048446 CAAAATTCAGACCAACAATTTTCTCAT 57.952 29.630 0.00 0.00 37.53 2.90
2001 2447 7.011295 GCAAAATTCAGACCAACAATTTTCTCA 59.989 33.333 0.00 0.00 37.53 3.27
2002 2448 7.011295 TGCAAAATTCAGACCAACAATTTTCTC 59.989 33.333 0.00 0.00 37.53 2.87
2003 2449 6.822676 TGCAAAATTCAGACCAACAATTTTCT 59.177 30.769 0.00 0.00 37.53 2.52
2004 2450 7.011295 TCTGCAAAATTCAGACCAACAATTTTC 59.989 33.333 0.00 0.00 37.53 2.29
2005 2451 6.822676 TCTGCAAAATTCAGACCAACAATTTT 59.177 30.769 0.00 0.00 39.29 1.82
2006 2452 6.347696 TCTGCAAAATTCAGACCAACAATTT 58.652 32.000 0.00 0.00 35.81 1.82
2007 2453 5.916318 TCTGCAAAATTCAGACCAACAATT 58.084 33.333 0.00 0.00 35.81 2.32
2008 2454 5.534207 TCTGCAAAATTCAGACCAACAAT 57.466 34.783 0.00 0.00 35.81 2.71
2009 2455 4.737352 GCTCTGCAAAATTCAGACCAACAA 60.737 41.667 0.00 0.00 35.81 2.83
2010 2456 3.243501 GCTCTGCAAAATTCAGACCAACA 60.244 43.478 0.00 0.00 35.81 3.33
2011 2457 3.243501 TGCTCTGCAAAATTCAGACCAAC 60.244 43.478 0.00 0.00 35.81 3.77
2012 2458 2.957680 TGCTCTGCAAAATTCAGACCAA 59.042 40.909 0.00 0.00 35.81 3.67
2013 2459 2.585330 TGCTCTGCAAAATTCAGACCA 58.415 42.857 0.00 0.00 35.81 4.02
2014 2460 3.863142 ATGCTCTGCAAAATTCAGACC 57.137 42.857 0.00 0.00 43.62 3.85
2015 2461 5.224888 TCAAATGCTCTGCAAAATTCAGAC 58.775 37.500 0.00 0.00 43.62 3.51
2016 2462 5.010314 ACTCAAATGCTCTGCAAAATTCAGA 59.990 36.000 0.00 0.00 43.62 3.27
2017 2463 5.227908 ACTCAAATGCTCTGCAAAATTCAG 58.772 37.500 0.00 0.00 43.62 3.02
2018 2464 5.204409 ACTCAAATGCTCTGCAAAATTCA 57.796 34.783 0.00 0.00 43.62 2.57
2019 2465 7.758528 AGATTACTCAAATGCTCTGCAAAATTC 59.241 33.333 0.00 0.00 43.62 2.17
2020 2466 7.609056 AGATTACTCAAATGCTCTGCAAAATT 58.391 30.769 0.00 0.00 43.62 1.82
2021 2467 7.166691 AGATTACTCAAATGCTCTGCAAAAT 57.833 32.000 0.00 0.00 43.62 1.82
2022 2468 6.579666 AGATTACTCAAATGCTCTGCAAAA 57.420 33.333 0.00 0.00 43.62 2.44
2023 2469 6.579666 AAGATTACTCAAATGCTCTGCAAA 57.420 33.333 0.00 0.00 43.62 3.68
2024 2470 6.579666 AAAGATTACTCAAATGCTCTGCAA 57.420 33.333 0.00 0.00 43.62 4.08
2025 2471 6.579666 AAAAGATTACTCAAATGCTCTGCA 57.420 33.333 0.00 0.00 44.86 4.41
2026 2472 5.736358 CGAAAAGATTACTCAAATGCTCTGC 59.264 40.000 0.00 0.00 0.00 4.26
2027 2473 6.835914 ACGAAAAGATTACTCAAATGCTCTG 58.164 36.000 0.00 0.00 0.00 3.35
2028 2474 8.723942 ATACGAAAAGATTACTCAAATGCTCT 57.276 30.769 0.00 0.00 0.00 4.09
2029 2475 8.821894 AGATACGAAAAGATTACTCAAATGCTC 58.178 33.333 0.00 0.00 0.00 4.26
2030 2476 8.723942 AGATACGAAAAGATTACTCAAATGCT 57.276 30.769 0.00 0.00 0.00 3.79
2053 2499 9.330063 CCACAGAAGCATACAAGAATAAATAGA 57.670 33.333 0.00 0.00 0.00 1.98
2054 2500 8.072567 GCCACAGAAGCATACAAGAATAAATAG 58.927 37.037 0.00 0.00 0.00 1.73
2055 2501 7.775093 AGCCACAGAAGCATACAAGAATAAATA 59.225 33.333 0.00 0.00 0.00 1.40
2056 2502 6.604795 AGCCACAGAAGCATACAAGAATAAAT 59.395 34.615 0.00 0.00 0.00 1.40
2057 2503 5.945784 AGCCACAGAAGCATACAAGAATAAA 59.054 36.000 0.00 0.00 0.00 1.40
2058 2504 5.500234 AGCCACAGAAGCATACAAGAATAA 58.500 37.500 0.00 0.00 0.00 1.40
2059 2505 5.102953 AGCCACAGAAGCATACAAGAATA 57.897 39.130 0.00 0.00 0.00 1.75
2060 2506 3.960571 AGCCACAGAAGCATACAAGAAT 58.039 40.909 0.00 0.00 0.00 2.40
2061 2507 3.423539 AGCCACAGAAGCATACAAGAA 57.576 42.857 0.00 0.00 0.00 2.52
2062 2508 3.008375 AGAAGCCACAGAAGCATACAAGA 59.992 43.478 0.00 0.00 0.00 3.02
2063 2509 3.341823 AGAAGCCACAGAAGCATACAAG 58.658 45.455 0.00 0.00 0.00 3.16
2064 2510 3.423539 AGAAGCCACAGAAGCATACAA 57.576 42.857 0.00 0.00 0.00 2.41
2065 2511 3.423539 AAGAAGCCACAGAAGCATACA 57.576 42.857 0.00 0.00 0.00 2.29
2066 2512 5.873732 CTTTAAGAAGCCACAGAAGCATAC 58.126 41.667 0.00 0.00 0.00 2.39
2090 2536 1.406898 TCCGACTAGAGCAGCAGAATG 59.593 52.381 0.00 0.00 40.87 2.67
2091 2537 1.769026 TCCGACTAGAGCAGCAGAAT 58.231 50.000 0.00 0.00 0.00 2.40
2092 2538 1.545841 TTCCGACTAGAGCAGCAGAA 58.454 50.000 0.00 0.00 0.00 3.02
2093 2539 1.545841 TTTCCGACTAGAGCAGCAGA 58.454 50.000 0.00 0.00 0.00 4.26
2094 2540 2.266554 CTTTTCCGACTAGAGCAGCAG 58.733 52.381 0.00 0.00 0.00 4.24
2095 2541 1.618837 ACTTTTCCGACTAGAGCAGCA 59.381 47.619 0.00 0.00 0.00 4.41
2096 2542 1.996191 CACTTTTCCGACTAGAGCAGC 59.004 52.381 0.00 0.00 0.00 5.25
2097 2543 2.989840 CACACTTTTCCGACTAGAGCAG 59.010 50.000 0.00 0.00 0.00 4.24
2098 2544 2.364324 ACACACTTTTCCGACTAGAGCA 59.636 45.455 0.00 0.00 0.00 4.26
2099 2545 3.027974 ACACACTTTTCCGACTAGAGC 57.972 47.619 0.00 0.00 0.00 4.09
2100 2546 5.048921 TCAGTACACACTTTTCCGACTAGAG 60.049 44.000 0.00 0.00 30.46 2.43
2101 2547 4.823442 TCAGTACACACTTTTCCGACTAGA 59.177 41.667 0.00 0.00 30.46 2.43
2102 2548 5.117355 TCAGTACACACTTTTCCGACTAG 57.883 43.478 0.00 0.00 30.46 2.57
2103 2549 4.022589 CCTCAGTACACACTTTTCCGACTA 60.023 45.833 0.00 0.00 30.46 2.59
2104 2550 3.243771 CCTCAGTACACACTTTTCCGACT 60.244 47.826 0.00 0.00 30.46 4.18
2105 2551 3.057734 CCTCAGTACACACTTTTCCGAC 58.942 50.000 0.00 0.00 30.46 4.79
2106 2552 2.547218 GCCTCAGTACACACTTTTCCGA 60.547 50.000 0.00 0.00 30.46 4.55
2107 2553 1.798813 GCCTCAGTACACACTTTTCCG 59.201 52.381 0.00 0.00 30.46 4.30
2108 2554 2.808543 CTGCCTCAGTACACACTTTTCC 59.191 50.000 0.00 0.00 30.46 3.13
2109 2555 3.728845 TCTGCCTCAGTACACACTTTTC 58.271 45.455 0.00 0.00 30.46 2.29
2110 2556 3.388024 TCTCTGCCTCAGTACACACTTTT 59.612 43.478 0.00 0.00 30.46 2.27
2111 2557 2.965831 TCTCTGCCTCAGTACACACTTT 59.034 45.455 0.00 0.00 30.46 2.66
2112 2558 2.598565 TCTCTGCCTCAGTACACACTT 58.401 47.619 0.00 0.00 30.46 3.16
2113 2559 2.294449 TCTCTGCCTCAGTACACACT 57.706 50.000 0.00 0.00 34.42 3.55
2114 2560 2.159170 GGATCTCTGCCTCAGTACACAC 60.159 54.545 0.00 0.00 32.61 3.82
2115 2561 2.103373 GGATCTCTGCCTCAGTACACA 58.897 52.381 0.00 0.00 32.61 3.72
2116 2562 2.103373 TGGATCTCTGCCTCAGTACAC 58.897 52.381 0.00 0.00 32.61 2.90
2117 2563 2.532250 TGGATCTCTGCCTCAGTACA 57.468 50.000 0.00 0.00 32.61 2.90
2118 2564 3.494048 CCATTGGATCTCTGCCTCAGTAC 60.494 52.174 0.00 0.00 32.61 2.73
2119 2565 2.702478 CCATTGGATCTCTGCCTCAGTA 59.298 50.000 0.00 0.00 32.61 2.74
2120 2566 1.489649 CCATTGGATCTCTGCCTCAGT 59.510 52.381 0.00 0.00 32.61 3.41
2121 2567 1.767088 TCCATTGGATCTCTGCCTCAG 59.233 52.381 0.00 0.00 0.00 3.35
2122 2568 1.883678 TCCATTGGATCTCTGCCTCA 58.116 50.000 0.00 0.00 0.00 3.86
2123 2569 3.181447 TGAATCCATTGGATCTCTGCCTC 60.181 47.826 18.45 10.80 42.27 4.70
2124 2570 2.781757 TGAATCCATTGGATCTCTGCCT 59.218 45.455 18.45 1.01 42.27 4.75
2125 2571 3.219176 TGAATCCATTGGATCTCTGCC 57.781 47.619 18.45 5.26 42.27 4.85
2126 2572 4.653868 AGATGAATCCATTGGATCTCTGC 58.346 43.478 18.45 12.65 42.27 4.26
2127 2573 5.935206 CAGAGATGAATCCATTGGATCTCTG 59.065 44.000 30.98 30.98 46.44 3.35
2128 2574 5.845065 TCAGAGATGAATCCATTGGATCTCT 59.155 40.000 22.59 22.59 42.27 3.10
2129 2575 6.111669 TCAGAGATGAATCCATTGGATCTC 57.888 41.667 18.45 19.22 42.27 2.75
2130 2576 6.705664 ATCAGAGATGAATCCATTGGATCT 57.294 37.500 18.45 12.01 42.27 2.75
2131 2577 7.447545 TGAAATCAGAGATGAATCCATTGGATC 59.552 37.037 18.45 12.16 42.27 3.36
2132 2578 7.230913 GTGAAATCAGAGATGAATCCATTGGAT 59.769 37.037 12.62 12.62 45.46 3.41
2133 2579 6.544931 GTGAAATCAGAGATGAATCCATTGGA 59.455 38.462 8.08 8.08 35.55 3.53
2134 2580 6.320418 TGTGAAATCAGAGATGAATCCATTGG 59.680 38.462 0.00 0.00 32.09 3.16
2135 2581 7.329588 TGTGAAATCAGAGATGAATCCATTG 57.670 36.000 0.00 0.00 32.09 2.82
2136 2582 7.949690 TTGTGAAATCAGAGATGAATCCATT 57.050 32.000 0.00 0.00 32.09 3.16
2137 2583 9.064706 GTATTGTGAAATCAGAGATGAATCCAT 57.935 33.333 0.00 0.00 35.29 3.41
2138 2584 8.270030 AGTATTGTGAAATCAGAGATGAATCCA 58.730 33.333 0.00 0.00 0.00 3.41
2139 2585 8.674263 AGTATTGTGAAATCAGAGATGAATCC 57.326 34.615 0.00 0.00 0.00 3.01
2141 2587 8.824781 CGAAGTATTGTGAAATCAGAGATGAAT 58.175 33.333 0.00 0.00 0.00 2.57
2142 2588 7.819415 ACGAAGTATTGTGAAATCAGAGATGAA 59.181 33.333 0.00 0.00 41.94 2.57
2143 2589 7.323420 ACGAAGTATTGTGAAATCAGAGATGA 58.677 34.615 0.00 0.00 41.94 2.92
2144 2590 7.531280 ACGAAGTATTGTGAAATCAGAGATG 57.469 36.000 0.00 0.00 41.94 2.90
2145 2591 8.446273 CAAACGAAGTATTGTGAAATCAGAGAT 58.554 33.333 0.00 0.00 45.00 2.75
2146 2592 7.095229 CCAAACGAAGTATTGTGAAATCAGAGA 60.095 37.037 0.00 0.00 45.00 3.10
2147 2593 7.017645 CCAAACGAAGTATTGTGAAATCAGAG 58.982 38.462 0.00 0.00 45.00 3.35
2148 2594 6.072728 CCCAAACGAAGTATTGTGAAATCAGA 60.073 38.462 0.00 0.00 45.00 3.27
2149 2595 6.086222 CCCAAACGAAGTATTGTGAAATCAG 58.914 40.000 0.00 0.00 45.00 2.90
2150 2596 5.533154 ACCCAAACGAAGTATTGTGAAATCA 59.467 36.000 0.00 0.00 45.00 2.57
2151 2597 5.856455 CACCCAAACGAAGTATTGTGAAATC 59.144 40.000 0.00 0.00 45.00 2.17
2152 2598 5.278758 CCACCCAAACGAAGTATTGTGAAAT 60.279 40.000 0.00 0.00 45.00 2.17
2153 2599 4.036971 CCACCCAAACGAAGTATTGTGAAA 59.963 41.667 0.00 0.00 45.00 2.69
2154 2600 3.566322 CCACCCAAACGAAGTATTGTGAA 59.434 43.478 0.00 0.00 45.00 3.18
2155 2601 3.142951 CCACCCAAACGAAGTATTGTGA 58.857 45.455 0.00 0.00 45.00 3.58
2156 2602 2.882137 ACCACCCAAACGAAGTATTGTG 59.118 45.455 0.00 0.00 45.00 3.33
2157 2603 2.882137 CACCACCCAAACGAAGTATTGT 59.118 45.455 0.00 0.00 45.00 2.71
2158 2604 3.142951 TCACCACCCAAACGAAGTATTG 58.857 45.455 0.00 0.00 45.00 1.90
2159 2605 3.495434 TCACCACCCAAACGAAGTATT 57.505 42.857 0.00 0.00 45.00 1.89
2160 2606 3.343617 CATCACCACCCAAACGAAGTAT 58.656 45.455 0.00 0.00 45.00 2.12
2161 2607 2.773487 CATCACCACCCAAACGAAGTA 58.227 47.619 0.00 0.00 45.00 2.24
2163 2609 0.240945 GCATCACCACCCAAACGAAG 59.759 55.000 0.00 0.00 0.00 3.79
2164 2610 0.466372 TGCATCACCACCCAAACGAA 60.466 50.000 0.00 0.00 0.00 3.85
2165 2611 1.149401 TGCATCACCACCCAAACGA 59.851 52.632 0.00 0.00 0.00 3.85
2166 2612 1.285641 GTGCATCACCACCCAAACG 59.714 57.895 0.00 0.00 0.00 3.60
2167 2613 0.968405 ATGTGCATCACCACCCAAAC 59.032 50.000 0.00 0.00 34.85 2.93
2168 2614 2.560542 GTTATGTGCATCACCACCCAAA 59.439 45.455 0.00 0.00 34.85 3.28
2169 2615 2.166829 GTTATGTGCATCACCACCCAA 58.833 47.619 0.00 0.00 34.85 4.12
2170 2616 1.615651 GGTTATGTGCATCACCACCCA 60.616 52.381 9.86 0.00 35.63 4.51
2171 2617 1.102978 GGTTATGTGCATCACCACCC 58.897 55.000 9.86 0.00 35.63 4.61
2172 2618 1.832883 TGGTTATGTGCATCACCACC 58.167 50.000 12.65 7.91 39.44 4.61
2173 2619 2.754552 ACATGGTTATGTGCATCACCAC 59.245 45.455 17.38 0.00 44.93 4.16
2174 2620 3.084536 ACATGGTTATGTGCATCACCA 57.915 42.857 17.36 17.36 45.82 4.17
2175 2621 3.487376 CGAACATGGTTATGTGCATCACC 60.487 47.826 8.22 8.22 46.54 4.02
2176 2622 3.487376 CCGAACATGGTTATGTGCATCAC 60.487 47.826 0.00 0.00 46.54 3.06
2177 2623 2.682352 CCGAACATGGTTATGTGCATCA 59.318 45.455 0.00 0.00 46.54 3.07
2178 2624 2.942376 TCCGAACATGGTTATGTGCATC 59.058 45.455 0.00 0.00 46.54 3.91
2179 2625 2.997980 TCCGAACATGGTTATGTGCAT 58.002 42.857 0.00 0.00 46.54 3.96
2180 2626 2.481289 TCCGAACATGGTTATGTGCA 57.519 45.000 0.00 0.00 46.54 4.57
2181 2627 3.840890 TTTCCGAACATGGTTATGTGC 57.159 42.857 0.00 0.00 46.54 4.57
2182 2628 5.181245 ACTCTTTTCCGAACATGGTTATGTG 59.819 40.000 0.00 0.00 46.54 3.21
2184 2630 5.880054 ACTCTTTTCCGAACATGGTTATG 57.120 39.130 0.00 0.00 40.24 1.90
2185 2631 7.166167 AGTTACTCTTTTCCGAACATGGTTAT 58.834 34.615 0.00 0.00 0.00 1.89
2186 2632 6.527423 AGTTACTCTTTTCCGAACATGGTTA 58.473 36.000 0.00 0.00 0.00 2.85
2187 2633 5.374071 AGTTACTCTTTTCCGAACATGGTT 58.626 37.500 0.00 0.00 0.00 3.67
2188 2634 4.969484 AGTTACTCTTTTCCGAACATGGT 58.031 39.130 0.00 0.00 0.00 3.55
2189 2635 6.164176 ACTAGTTACTCTTTTCCGAACATGG 58.836 40.000 0.00 0.00 0.00 3.66
2190 2636 6.866770 TGACTAGTTACTCTTTTCCGAACATG 59.133 38.462 0.00 0.00 0.00 3.21
2191 2637 6.989659 TGACTAGTTACTCTTTTCCGAACAT 58.010 36.000 0.00 0.00 0.00 2.71
2192 2638 6.395426 TGACTAGTTACTCTTTTCCGAACA 57.605 37.500 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.