Multiple sequence alignment - TraesCS6A01G135000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G135000 chr6A 100.000 1956 0 0 1 1956 107012849 107010894 0.000000e+00 3613.0
1 TraesCS6A01G135000 chr6A 100.000 275 0 0 2197 2471 107010653 107010379 2.190000e-140 508.0
2 TraesCS6A01G135000 chr6A 96.364 275 10 0 2197 2471 215605633 215605359 1.040000e-123 453.0
3 TraesCS6A01G135000 chr6A 95.817 263 11 0 1694 1956 463030306 463030568 2.270000e-115 425.0
4 TraesCS6A01G135000 chr7D 94.604 1705 84 7 1 1699 505909712 505908010 0.000000e+00 2632.0
5 TraesCS6A01G135000 chr7D 94.066 1702 96 5 1 1699 160690936 160689237 0.000000e+00 2579.0
6 TraesCS6A01G135000 chr7D 93.893 1703 100 4 1 1699 460639779 460638077 0.000000e+00 2566.0
7 TraesCS6A01G135000 chr2D 94.474 1701 90 4 1 1699 648148571 648150269 0.000000e+00 2617.0
8 TraesCS6A01G135000 chr2D 94.252 1705 88 9 1 1699 60191049 60189349 0.000000e+00 2597.0
9 TraesCS6A01G135000 chr2D 94.190 1704 90 9 1 1699 349010864 349009165 0.000000e+00 2590.0
10 TraesCS6A01G135000 chr5D 94.245 1703 93 5 1 1699 432505716 432507417 0.000000e+00 2597.0
11 TraesCS6A01G135000 chr6D 94.176 1700 94 4 1 1697 359439055 359437358 0.000000e+00 2586.0
12 TraesCS6A01G135000 chr6D 93.959 1705 97 5 1 1699 11364955 11366659 0.000000e+00 2573.0
13 TraesCS6A01G135000 chr7A 96.337 273 10 0 2199 2471 427389970 427390242 1.350000e-122 449.0
14 TraesCS6A01G135000 chr7A 96.498 257 9 0 1700 1956 288072637 288072381 2.270000e-115 425.0
15 TraesCS6A01G135000 chr5A 96.000 275 11 0 2197 2471 108796086 108795812 4.850000e-122 448.0
16 TraesCS6A01G135000 chr5A 96.512 258 9 0 1699 1956 432396918 432396661 6.320000e-116 427.0
17 TraesCS6A01G135000 chr5A 94.737 266 11 3 1691 1956 431432130 431431868 6.360000e-111 411.0
18 TraesCS6A01G135000 chr4A 96.000 275 11 0 2197 2471 78051886 78051612 4.850000e-122 448.0
19 TraesCS6A01G135000 chr4A 96.498 257 9 0 1700 1956 111184768 111184512 2.270000e-115 425.0
20 TraesCS6A01G135000 chr4A 95.817 263 11 0 1694 1956 416372755 416373017 2.270000e-115 425.0
21 TraesCS6A01G135000 chr4A 95.817 263 11 0 1694 1956 416415575 416415837 2.270000e-115 425.0
22 TraesCS6A01G135000 chr3A 96.000 275 11 0 2197 2471 503758997 503759271 4.850000e-122 448.0
23 TraesCS6A01G135000 chr3A 95.985 274 11 0 2198 2471 369507527 369507800 1.740000e-121 446.0
24 TraesCS6A01G135000 chr3A 96.000 275 10 1 2197 2471 423554478 423554751 1.740000e-121 446.0
25 TraesCS6A01G135000 chr2A 96.000 275 11 0 2197 2471 200459937 200460211 4.850000e-122 448.0
26 TraesCS6A01G135000 chr2A 96.000 275 11 0 2197 2471 448596278 448596004 4.850000e-122 448.0
27 TraesCS6A01G135000 chr2A 96.887 257 8 0 1700 1956 179206056 179205800 4.880000e-117 431.0
28 TraesCS6A01G135000 chr1A 95.817 263 11 0 1694 1956 462360806 462361068 2.270000e-115 425.0
29 TraesCS6A01G135000 chr1A 98.182 55 1 0 1645 1699 6560351 6560405 2.020000e-16 97.1
30 TraesCS6A01G135000 chr1D 85.020 247 23 6 1453 1699 495408132 495407900 3.180000e-59 239.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G135000 chr6A 107010379 107012849 2470 True 2060.5 3613 100.000 1 2471 2 chr6A.!!$R2 2470
1 TraesCS6A01G135000 chr7D 505908010 505909712 1702 True 2632.0 2632 94.604 1 1699 1 chr7D.!!$R3 1698
2 TraesCS6A01G135000 chr7D 160689237 160690936 1699 True 2579.0 2579 94.066 1 1699 1 chr7D.!!$R1 1698
3 TraesCS6A01G135000 chr7D 460638077 460639779 1702 True 2566.0 2566 93.893 1 1699 1 chr7D.!!$R2 1698
4 TraesCS6A01G135000 chr2D 648148571 648150269 1698 False 2617.0 2617 94.474 1 1699 1 chr2D.!!$F1 1698
5 TraesCS6A01G135000 chr2D 60189349 60191049 1700 True 2597.0 2597 94.252 1 1699 1 chr2D.!!$R1 1698
6 TraesCS6A01G135000 chr2D 349009165 349010864 1699 True 2590.0 2590 94.190 1 1699 1 chr2D.!!$R2 1698
7 TraesCS6A01G135000 chr5D 432505716 432507417 1701 False 2597.0 2597 94.245 1 1699 1 chr5D.!!$F1 1698
8 TraesCS6A01G135000 chr6D 359437358 359439055 1697 True 2586.0 2586 94.176 1 1697 1 chr6D.!!$R1 1696
9 TraesCS6A01G135000 chr6D 11364955 11366659 1704 False 2573.0 2573 93.959 1 1699 1 chr6D.!!$F1 1698

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 125 0.032017 AGGATGTCGCCCTACCTTCT 60.032 55.0 0.0 0.0 30.92 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1931 1944 0.111253 CAAGTCTCCTGGGCCTTGTT 59.889 55.0 4.53 0.0 31.79 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 3.054779 TCGAAGGGGAATGGATAAGGA 57.945 47.619 0.00 0.00 0.00 3.36
111 112 3.073062 CGAAGGGGAATGGATAAGGATGT 59.927 47.826 0.00 0.00 0.00 3.06
118 119 2.391926 TGGATAAGGATGTCGCCCTA 57.608 50.000 0.00 0.00 32.77 3.53
124 125 0.032017 AGGATGTCGCCCTACCTTCT 60.032 55.000 0.00 0.00 30.92 2.85
127 128 2.584236 GATGTCGCCCTACCTTCTCTA 58.416 52.381 0.00 0.00 0.00 2.43
152 153 3.151022 GGCCTCACTCCTCCTCGG 61.151 72.222 0.00 0.00 0.00 4.63
171 173 2.777146 GCCCCCTCCCAAATCCAA 59.223 61.111 0.00 0.00 0.00 3.53
182 184 3.597868 TCCCAAATCCAATTCTCCTCCTT 59.402 43.478 0.00 0.00 0.00 3.36
200 202 3.889044 GCTCGCTCGATCCCGTCA 61.889 66.667 0.00 0.00 37.05 4.35
243 245 3.716195 CCACCATGACCGAGCCCA 61.716 66.667 0.00 0.00 0.00 5.36
278 280 3.541713 CTCCCTGCGGGCTAGGAC 61.542 72.222 5.85 0.00 43.94 3.85
380 382 0.396811 CCGTCTTCCTCAACCTTGGT 59.603 55.000 0.00 0.00 0.00 3.67
395 397 2.358247 GGTCCACCGCGACATTGT 60.358 61.111 8.23 0.00 34.24 2.71
480 482 1.080498 TCTCCTCTTGCCTTTCCCCTA 59.920 52.381 0.00 0.00 0.00 3.53
485 487 3.053320 CCTCTTGCCTTTCCCCTATTTCT 60.053 47.826 0.00 0.00 0.00 2.52
525 527 2.509786 TATTTCGCCGTGGCCGAC 60.510 61.111 5.08 0.00 37.98 4.79
569 571 3.400054 GGGGTAGCCACCGAGCTT 61.400 66.667 14.06 0.00 46.86 3.74
609 611 2.745308 ATGCCCGCTCCTATGCACA 61.745 57.895 0.00 0.00 36.41 4.57
786 791 2.573869 CGCCACACTCTCGATGGT 59.426 61.111 4.04 0.00 35.79 3.55
872 877 1.452953 CGCCTCTAGTCGTGGCCATA 61.453 60.000 9.72 0.00 46.98 2.74
1132 1137 2.084546 GCTGTGGTGGAGGTGTTTATC 58.915 52.381 0.00 0.00 0.00 1.75
1157 1162 0.396001 AGGAGCCGGAGTAGAAGGAC 60.396 60.000 5.05 0.00 0.00 3.85
1206 1215 2.882927 TTCATAACCCGGTGATCTCG 57.117 50.000 0.00 0.00 0.00 4.04
1367 1378 9.628746 GGTTTTATTGTTTGGTAACGTGATATT 57.371 29.630 0.00 0.00 37.06 1.28
1699 1712 6.318900 GTGGAGAGAAAAATAAACCGATGGAT 59.681 38.462 0.00 0.00 0.00 3.41
1700 1713 6.318648 TGGAGAGAAAAATAAACCGATGGATG 59.681 38.462 0.00 0.00 0.00 3.51
1701 1714 6.542370 GGAGAGAAAAATAAACCGATGGATGA 59.458 38.462 0.00 0.00 0.00 2.92
1702 1715 7.229506 GGAGAGAAAAATAAACCGATGGATGAT 59.770 37.037 0.00 0.00 0.00 2.45
1703 1716 9.273016 GAGAGAAAAATAAACCGATGGATGATA 57.727 33.333 0.00 0.00 0.00 2.15
1704 1717 9.057089 AGAGAAAAATAAACCGATGGATGATAC 57.943 33.333 0.00 0.00 0.00 2.24
1705 1718 7.861630 AGAAAAATAAACCGATGGATGATACG 58.138 34.615 0.00 0.00 0.00 3.06
1706 1719 7.497909 AGAAAAATAAACCGATGGATGATACGT 59.502 33.333 0.00 0.00 0.00 3.57
1707 1720 6.780706 AAATAAACCGATGGATGATACGTC 57.219 37.500 0.00 0.00 0.00 4.34
1708 1721 5.723672 ATAAACCGATGGATGATACGTCT 57.276 39.130 0.00 0.00 0.00 4.18
1709 1722 3.644884 AACCGATGGATGATACGTCTC 57.355 47.619 0.00 0.00 0.00 3.36
1710 1723 1.887198 ACCGATGGATGATACGTCTCC 59.113 52.381 0.00 0.00 0.00 3.71
1711 1724 1.886542 CCGATGGATGATACGTCTCCA 59.113 52.381 10.37 10.37 42.95 3.86
1712 1725 2.296190 CCGATGGATGATACGTCTCCAA 59.704 50.000 11.58 0.00 42.12 3.53
1713 1726 3.309388 CGATGGATGATACGTCTCCAAC 58.691 50.000 11.58 8.94 42.12 3.77
1727 1740 6.642683 CGTCTCCAACGTATCTACAATTTT 57.357 37.500 0.00 0.00 46.42 1.82
1728 1741 7.057149 CGTCTCCAACGTATCTACAATTTTT 57.943 36.000 0.00 0.00 46.42 1.94
1729 1742 6.953743 CGTCTCCAACGTATCTACAATTTTTG 59.046 38.462 0.00 0.00 46.42 2.44
1730 1743 7.148705 CGTCTCCAACGTATCTACAATTTTTGA 60.149 37.037 0.00 0.00 46.42 2.69
1731 1744 8.665685 GTCTCCAACGTATCTACAATTTTTGAT 58.334 33.333 0.00 0.00 0.00 2.57
1732 1745 9.226606 TCTCCAACGTATCTACAATTTTTGATT 57.773 29.630 0.00 0.00 0.00 2.57
1733 1746 9.277565 CTCCAACGTATCTACAATTTTTGATTG 57.722 33.333 0.00 0.00 35.29 2.67
1734 1747 7.753132 TCCAACGTATCTACAATTTTTGATTGC 59.247 33.333 0.00 0.00 32.55 3.56
1735 1748 7.754924 CCAACGTATCTACAATTTTTGATTGCT 59.245 33.333 0.00 0.00 32.55 3.91
1736 1749 8.788813 CAACGTATCTACAATTTTTGATTGCTC 58.211 33.333 0.00 0.00 32.55 4.26
1737 1750 7.472543 ACGTATCTACAATTTTTGATTGCTCC 58.527 34.615 0.00 0.00 32.55 4.70
1738 1751 7.120579 ACGTATCTACAATTTTTGATTGCTCCA 59.879 33.333 0.00 0.00 32.55 3.86
1739 1752 8.131100 CGTATCTACAATTTTTGATTGCTCCAT 58.869 33.333 0.00 0.00 32.55 3.41
1740 1753 9.241317 GTATCTACAATTTTTGATTGCTCCATG 57.759 33.333 0.00 0.00 32.55 3.66
1741 1754 6.101332 TCTACAATTTTTGATTGCTCCATGC 58.899 36.000 0.00 0.00 43.25 4.06
1742 1755 4.901868 ACAATTTTTGATTGCTCCATGCT 58.098 34.783 0.00 0.00 43.37 3.79
1743 1756 6.040209 ACAATTTTTGATTGCTCCATGCTA 57.960 33.333 0.00 0.00 43.37 3.49
1744 1757 6.646267 ACAATTTTTGATTGCTCCATGCTAT 58.354 32.000 0.00 0.00 43.37 2.97
1745 1758 7.784037 ACAATTTTTGATTGCTCCATGCTATA 58.216 30.769 0.00 0.00 43.37 1.31
1746 1759 8.426489 ACAATTTTTGATTGCTCCATGCTATAT 58.574 29.630 0.00 0.00 43.37 0.86
1747 1760 9.268268 CAATTTTTGATTGCTCCATGCTATATT 57.732 29.630 0.00 0.00 43.37 1.28
1751 1764 9.524496 TTTTGATTGCTCCATGCTATATTATCT 57.476 29.630 0.00 0.00 43.37 1.98
1753 1766 9.605275 TTGATTGCTCCATGCTATATTATCTAC 57.395 33.333 0.00 0.00 43.37 2.59
1754 1767 8.985922 TGATTGCTCCATGCTATATTATCTACT 58.014 33.333 0.00 0.00 43.37 2.57
1755 1768 9.258826 GATTGCTCCATGCTATATTATCTACTG 57.741 37.037 0.00 0.00 43.37 2.74
1756 1769 7.724490 TGCTCCATGCTATATTATCTACTGT 57.276 36.000 0.00 0.00 43.37 3.55
1757 1770 8.138928 TGCTCCATGCTATATTATCTACTGTT 57.861 34.615 0.00 0.00 43.37 3.16
1758 1771 8.597167 TGCTCCATGCTATATTATCTACTGTTT 58.403 33.333 0.00 0.00 43.37 2.83
1759 1772 9.442047 GCTCCATGCTATATTATCTACTGTTTT 57.558 33.333 0.00 0.00 38.95 2.43
1761 1774 9.725019 TCCATGCTATATTATCTACTGTTTTGG 57.275 33.333 0.00 0.00 0.00 3.28
1762 1775 9.725019 CCATGCTATATTATCTACTGTTTTGGA 57.275 33.333 0.00 0.00 0.00 3.53
1772 1785 7.645058 ATCTACTGTTTTGGACATTATTGGG 57.355 36.000 0.00 0.00 37.69 4.12
1773 1786 4.535526 ACTGTTTTGGACATTATTGGGC 57.464 40.909 0.00 0.00 37.69 5.36
1774 1787 4.159557 ACTGTTTTGGACATTATTGGGCT 58.840 39.130 0.00 0.00 37.69 5.19
1775 1788 4.592778 ACTGTTTTGGACATTATTGGGCTT 59.407 37.500 0.00 0.00 37.69 4.35
1776 1789 5.071653 ACTGTTTTGGACATTATTGGGCTTT 59.928 36.000 0.00 0.00 37.69 3.51
1777 1790 6.268847 ACTGTTTTGGACATTATTGGGCTTTA 59.731 34.615 0.00 0.00 37.69 1.85
1778 1791 7.038373 ACTGTTTTGGACATTATTGGGCTTTAT 60.038 33.333 0.00 0.00 37.69 1.40
1779 1792 7.684529 TGTTTTGGACATTATTGGGCTTTATT 58.315 30.769 0.00 0.00 32.00 1.40
1780 1793 8.816894 TGTTTTGGACATTATTGGGCTTTATTA 58.183 29.630 0.00 0.00 32.00 0.98
1781 1794 9.830975 GTTTTGGACATTATTGGGCTTTATTAT 57.169 29.630 0.00 0.00 0.00 1.28
1782 1795 9.829507 TTTTGGACATTATTGGGCTTTATTATG 57.170 29.630 0.00 0.00 0.00 1.90
1783 1796 6.991938 TGGACATTATTGGGCTTTATTATGC 58.008 36.000 0.00 0.00 0.00 3.14
1784 1797 6.552725 TGGACATTATTGGGCTTTATTATGCA 59.447 34.615 0.00 0.00 0.00 3.96
1785 1798 6.868339 GGACATTATTGGGCTTTATTATGCAC 59.132 38.462 0.00 0.00 0.00 4.57
1786 1799 7.255942 GGACATTATTGGGCTTTATTATGCACT 60.256 37.037 0.00 0.00 33.09 4.40
1787 1800 8.021898 ACATTATTGGGCTTTATTATGCACTT 57.978 30.769 0.00 0.00 33.09 3.16
1788 1801 8.485392 ACATTATTGGGCTTTATTATGCACTTT 58.515 29.630 0.00 0.00 33.09 2.66
1789 1802 9.328845 CATTATTGGGCTTTATTATGCACTTTT 57.671 29.630 0.00 0.00 33.09 2.27
1819 1832 7.634671 ATTTTTGGGACTAACCTATTAACCG 57.365 36.000 0.00 0.00 38.98 4.44
1820 1833 4.758773 TTGGGACTAACCTATTAACCGG 57.241 45.455 0.00 0.00 38.98 5.28
1821 1834 3.992999 TGGGACTAACCTATTAACCGGA 58.007 45.455 9.46 0.00 38.98 5.14
1822 1835 3.962718 TGGGACTAACCTATTAACCGGAG 59.037 47.826 9.46 0.00 38.98 4.63
1823 1836 4.597404 GGACTAACCTATTAACCGGAGG 57.403 50.000 9.46 6.51 45.59 4.30
1824 1837 3.244009 GGACTAACCTATTAACCGGAGGC 60.244 52.174 9.46 0.00 44.44 4.70
1825 1838 6.309757 GGACTAACCTATTAACCGGAGGCC 62.310 54.167 9.46 0.00 44.44 5.19
1839 1852 3.464494 GGCCCAGCCCAGAATTGC 61.464 66.667 0.00 0.00 44.06 3.56
1840 1853 2.363406 GCCCAGCCCAGAATTGCT 60.363 61.111 0.00 0.00 38.67 3.91
1871 1884 5.761165 CCTGTTTTAGGGTTTCGAAGAAA 57.239 39.130 0.00 0.00 42.41 2.52
1872 1885 6.139048 CCTGTTTTAGGGTTTCGAAGAAAA 57.861 37.500 0.00 0.00 42.41 2.29
1873 1886 6.206498 CCTGTTTTAGGGTTTCGAAGAAAAG 58.794 40.000 0.00 0.00 42.41 2.27
1874 1887 6.139048 TGTTTTAGGGTTTCGAAGAAAAGG 57.861 37.500 0.00 0.00 45.90 3.11
1875 1888 5.887035 TGTTTTAGGGTTTCGAAGAAAAGGA 59.113 36.000 0.00 0.00 45.90 3.36
1876 1889 6.377712 TGTTTTAGGGTTTCGAAGAAAAGGAA 59.622 34.615 0.00 0.00 45.90 3.36
1877 1890 7.068962 TGTTTTAGGGTTTCGAAGAAAAGGAAT 59.931 33.333 0.00 0.00 45.90 3.01
1878 1891 8.570488 GTTTTAGGGTTTCGAAGAAAAGGAATA 58.430 33.333 0.00 0.00 45.90 1.75
1879 1892 8.873186 TTTAGGGTTTCGAAGAAAAGGAATAT 57.127 30.769 0.00 0.00 45.90 1.28
1880 1893 8.502105 TTAGGGTTTCGAAGAAAAGGAATATC 57.498 34.615 0.00 0.00 45.90 1.63
1881 1894 6.481643 AGGGTTTCGAAGAAAAGGAATATCA 58.518 36.000 0.00 0.00 45.90 2.15
1882 1895 6.946009 AGGGTTTCGAAGAAAAGGAATATCAA 59.054 34.615 0.00 0.00 45.90 2.57
1883 1896 7.450323 AGGGTTTCGAAGAAAAGGAATATCAAA 59.550 33.333 0.00 0.00 45.90 2.69
1884 1897 7.541091 GGGTTTCGAAGAAAAGGAATATCAAAC 59.459 37.037 0.00 0.00 45.90 2.93
1885 1898 7.270579 GGTTTCGAAGAAAAGGAATATCAAACG 59.729 37.037 0.00 0.00 45.90 3.60
1886 1899 6.417191 TCGAAGAAAAGGAATATCAAACGG 57.583 37.500 0.00 0.00 0.00 4.44
1887 1900 6.167685 TCGAAGAAAAGGAATATCAAACGGA 58.832 36.000 0.00 0.00 0.00 4.69
1888 1901 6.312918 TCGAAGAAAAGGAATATCAAACGGAG 59.687 38.462 0.00 0.00 0.00 4.63
1890 1903 7.277098 CGAAGAAAAGGAATATCAAACGGAGTA 59.723 37.037 0.00 0.00 45.00 2.59
1891 1904 7.845066 AGAAAAGGAATATCAAACGGAGTAC 57.155 36.000 0.00 0.00 45.00 2.73
1892 1905 7.391620 AGAAAAGGAATATCAAACGGAGTACA 58.608 34.615 0.00 0.00 45.00 2.90
1893 1906 7.881232 AGAAAAGGAATATCAAACGGAGTACAA 59.119 33.333 0.00 0.00 45.00 2.41
1894 1907 7.611213 AAAGGAATATCAAACGGAGTACAAG 57.389 36.000 0.00 0.00 45.00 3.16
1895 1908 5.116882 AGGAATATCAAACGGAGTACAAGC 58.883 41.667 0.00 0.00 45.00 4.01
1896 1909 4.025979 GGAATATCAAACGGAGTACAAGCG 60.026 45.833 0.00 0.00 45.00 4.68
1897 1910 2.450609 ATCAAACGGAGTACAAGCGT 57.549 45.000 0.00 0.00 45.00 5.07
1898 1911 3.581024 ATCAAACGGAGTACAAGCGTA 57.419 42.857 0.00 0.00 45.00 4.42
1899 1912 3.367992 TCAAACGGAGTACAAGCGTAA 57.632 42.857 0.00 0.00 45.00 3.18
1900 1913 3.916761 TCAAACGGAGTACAAGCGTAAT 58.083 40.909 0.00 0.00 45.00 1.89
1901 1914 3.676172 TCAAACGGAGTACAAGCGTAATG 59.324 43.478 0.00 0.00 45.00 1.90
1902 1915 3.581024 AACGGAGTACAAGCGTAATGA 57.419 42.857 0.00 0.00 45.00 2.57
1903 1916 3.581024 ACGGAGTACAAGCGTAATGAA 57.419 42.857 0.00 0.00 41.94 2.57
1904 1917 3.916761 ACGGAGTACAAGCGTAATGAAA 58.083 40.909 0.00 0.00 41.94 2.69
1905 1918 3.676646 ACGGAGTACAAGCGTAATGAAAC 59.323 43.478 0.00 0.00 41.94 2.78
1906 1919 3.924686 CGGAGTACAAGCGTAATGAAACT 59.075 43.478 0.00 0.00 0.00 2.66
1907 1920 4.387862 CGGAGTACAAGCGTAATGAAACTT 59.612 41.667 0.00 0.00 0.00 2.66
1908 1921 5.107220 CGGAGTACAAGCGTAATGAAACTTT 60.107 40.000 0.00 0.00 0.00 2.66
1909 1922 6.304882 GGAGTACAAGCGTAATGAAACTTTC 58.695 40.000 0.00 0.00 0.00 2.62
1910 1923 5.912528 AGTACAAGCGTAATGAAACTTTCG 58.087 37.500 0.00 0.00 0.00 3.46
1911 1924 4.141855 ACAAGCGTAATGAAACTTTCGG 57.858 40.909 0.00 0.00 0.00 4.30
1912 1925 3.058501 ACAAGCGTAATGAAACTTTCGGG 60.059 43.478 0.00 0.00 0.00 5.14
1913 1926 3.048337 AGCGTAATGAAACTTTCGGGA 57.952 42.857 0.00 0.00 0.00 5.14
1914 1927 3.404899 AGCGTAATGAAACTTTCGGGAA 58.595 40.909 0.00 0.00 0.00 3.97
1915 1928 3.816523 AGCGTAATGAAACTTTCGGGAAA 59.183 39.130 0.00 0.00 0.00 3.13
1927 1940 5.689383 CTTTCGGGAAAGTGATTTTCTCA 57.311 39.130 12.00 0.00 44.97 3.27
1928 1941 6.072112 CTTTCGGGAAAGTGATTTTCTCAA 57.928 37.500 12.00 0.00 44.97 3.02
1929 1942 5.432885 TTCGGGAAAGTGATTTTCTCAAC 57.567 39.130 1.25 0.00 44.97 3.18
1930 1943 3.496884 TCGGGAAAGTGATTTTCTCAACG 59.503 43.478 1.25 2.26 44.97 4.10
1931 1944 3.496884 CGGGAAAGTGATTTTCTCAACGA 59.503 43.478 1.25 0.00 44.97 3.85
1932 1945 4.024387 CGGGAAAGTGATTTTCTCAACGAA 60.024 41.667 1.25 0.00 44.97 3.85
1933 1946 5.212934 GGGAAAGTGATTTTCTCAACGAAC 58.787 41.667 0.50 0.00 44.27 3.95
1934 1947 5.220970 GGGAAAGTGATTTTCTCAACGAACA 60.221 40.000 0.50 0.00 44.27 3.18
1935 1948 6.262601 GGAAAGTGATTTTCTCAACGAACAA 58.737 36.000 0.50 0.00 43.81 2.83
1936 1949 6.414987 GGAAAGTGATTTTCTCAACGAACAAG 59.585 38.462 0.50 0.00 43.81 3.16
1937 1950 5.424121 AGTGATTTTCTCAACGAACAAGG 57.576 39.130 0.00 0.00 35.07 3.61
1938 1951 3.975035 GTGATTTTCTCAACGAACAAGGC 59.025 43.478 0.00 0.00 35.07 4.35
1939 1952 3.004315 TGATTTTCTCAACGAACAAGGCC 59.996 43.478 0.00 0.00 0.00 5.19
1940 1953 1.314730 TTTCTCAACGAACAAGGCCC 58.685 50.000 0.00 0.00 0.00 5.80
1941 1954 0.181587 TTCTCAACGAACAAGGCCCA 59.818 50.000 0.00 0.00 0.00 5.36
1942 1955 0.250295 TCTCAACGAACAAGGCCCAG 60.250 55.000 0.00 0.00 0.00 4.45
1943 1956 1.228124 TCAACGAACAAGGCCCAGG 60.228 57.895 0.00 0.00 0.00 4.45
1944 1957 1.228124 CAACGAACAAGGCCCAGGA 60.228 57.895 0.00 0.00 0.00 3.86
1945 1958 1.073199 AACGAACAAGGCCCAGGAG 59.927 57.895 0.00 0.00 0.00 3.69
1946 1959 1.415672 AACGAACAAGGCCCAGGAGA 61.416 55.000 0.00 0.00 0.00 3.71
1947 1960 1.376037 CGAACAAGGCCCAGGAGAC 60.376 63.158 0.00 0.00 0.00 3.36
1948 1961 1.831652 CGAACAAGGCCCAGGAGACT 61.832 60.000 0.00 0.00 46.44 3.24
1949 1962 0.402121 GAACAAGGCCCAGGAGACTT 59.598 55.000 0.00 0.00 40.21 3.01
1950 1963 0.111253 AACAAGGCCCAGGAGACTTG 59.889 55.000 17.74 17.74 44.32 3.16
1951 1964 1.001641 CAAGGCCCAGGAGACTTGG 60.002 63.158 13.39 0.00 46.03 3.61
1952 1965 1.151810 AAGGCCCAGGAGACTTGGA 60.152 57.895 0.00 0.00 46.19 3.53
1953 1966 2.671682 GGCCCAGGAGACTTGGAC 59.328 66.667 0.00 0.00 45.41 4.02
1954 1967 2.671682 GCCCAGGAGACTTGGACC 59.328 66.667 1.52 0.00 46.19 4.46
1955 1968 2.972819 GCCCAGGAGACTTGGACCC 61.973 68.421 1.52 0.00 46.19 4.46
2225 2238 4.722700 CTCGTGGGCCCCCTGTTG 62.723 72.222 22.27 2.17 36.94 3.33
2231 2244 4.066139 GGCCCCCTGTTGCTCCAT 62.066 66.667 0.00 0.00 0.00 3.41
2232 2245 2.440980 GCCCCCTGTTGCTCCATC 60.441 66.667 0.00 0.00 0.00 3.51
2233 2246 2.124570 CCCCCTGTTGCTCCATCG 60.125 66.667 0.00 0.00 0.00 3.84
2234 2247 2.669133 CCCCCTGTTGCTCCATCGA 61.669 63.158 0.00 0.00 0.00 3.59
2235 2248 1.450312 CCCCTGTTGCTCCATCGAC 60.450 63.158 0.00 0.00 0.00 4.20
2236 2249 1.811266 CCCTGTTGCTCCATCGACG 60.811 63.158 0.00 0.00 0.00 5.12
2237 2250 1.079819 CCTGTTGCTCCATCGACGT 60.080 57.895 0.00 0.00 0.00 4.34
2238 2251 0.172578 CCTGTTGCTCCATCGACGTA 59.827 55.000 0.00 0.00 0.00 3.57
2239 2252 1.269166 CTGTTGCTCCATCGACGTAC 58.731 55.000 0.00 0.00 0.00 3.67
2240 2253 0.885879 TGTTGCTCCATCGACGTACT 59.114 50.000 0.00 0.00 0.00 2.73
2241 2254 1.135489 TGTTGCTCCATCGACGTACTC 60.135 52.381 0.00 0.00 0.00 2.59
2242 2255 0.454600 TTGCTCCATCGACGTACTCC 59.545 55.000 0.00 0.00 0.00 3.85
2243 2256 0.393944 TGCTCCATCGACGTACTCCT 60.394 55.000 0.00 0.00 0.00 3.69
2244 2257 0.739561 GCTCCATCGACGTACTCCTT 59.260 55.000 0.00 0.00 0.00 3.36
2245 2258 1.268640 GCTCCATCGACGTACTCCTTC 60.269 57.143 0.00 0.00 0.00 3.46
2246 2259 1.334243 CTCCATCGACGTACTCCTTCC 59.666 57.143 0.00 0.00 0.00 3.46
2247 2260 1.064906 TCCATCGACGTACTCCTTCCT 60.065 52.381 0.00 0.00 0.00 3.36
2248 2261 1.334243 CCATCGACGTACTCCTTCCTC 59.666 57.143 0.00 0.00 0.00 3.71
2249 2262 1.334243 CATCGACGTACTCCTTCCTCC 59.666 57.143 0.00 0.00 0.00 4.30
2250 2263 0.617413 TCGACGTACTCCTTCCTCCT 59.383 55.000 0.00 0.00 0.00 3.69
2251 2264 1.833630 TCGACGTACTCCTTCCTCCTA 59.166 52.381 0.00 0.00 0.00 2.94
2252 2265 2.437281 TCGACGTACTCCTTCCTCCTAT 59.563 50.000 0.00 0.00 0.00 2.57
2253 2266 3.643320 TCGACGTACTCCTTCCTCCTATA 59.357 47.826 0.00 0.00 0.00 1.31
2254 2267 4.285517 TCGACGTACTCCTTCCTCCTATAT 59.714 45.833 0.00 0.00 0.00 0.86
2255 2268 5.481824 TCGACGTACTCCTTCCTCCTATATA 59.518 44.000 0.00 0.00 0.00 0.86
2256 2269 6.155910 TCGACGTACTCCTTCCTCCTATATAT 59.844 42.308 0.00 0.00 0.00 0.86
2257 2270 6.258287 CGACGTACTCCTTCCTCCTATATATG 59.742 46.154 0.00 0.00 0.00 1.78
2258 2271 5.887035 ACGTACTCCTTCCTCCTATATATGC 59.113 44.000 0.00 0.00 0.00 3.14
2259 2272 5.299782 CGTACTCCTTCCTCCTATATATGCC 59.700 48.000 0.00 0.00 0.00 4.40
2260 2273 5.560467 ACTCCTTCCTCCTATATATGCCT 57.440 43.478 0.00 0.00 0.00 4.75
2261 2274 6.676164 ACTCCTTCCTCCTATATATGCCTA 57.324 41.667 0.00 0.00 0.00 3.93
2262 2275 6.436890 ACTCCTTCCTCCTATATATGCCTAC 58.563 44.000 0.00 0.00 0.00 3.18
2263 2276 6.010650 ACTCCTTCCTCCTATATATGCCTACA 60.011 42.308 0.00 0.00 0.00 2.74
2264 2277 6.998112 TCCTTCCTCCTATATATGCCTACAT 58.002 40.000 0.00 0.00 40.49 2.29
2265 2278 8.126241 TCCTTCCTCCTATATATGCCTACATA 57.874 38.462 0.00 0.00 42.85 2.29
2266 2279 8.005388 TCCTTCCTCCTATATATGCCTACATAC 58.995 40.741 0.00 0.00 41.50 2.39
2267 2280 7.233757 CCTTCCTCCTATATATGCCTACATACC 59.766 44.444 0.00 0.00 41.50 2.73
2268 2281 6.621394 TCCTCCTATATATGCCTACATACCC 58.379 44.000 0.00 0.00 41.50 3.69
2269 2282 5.780793 CCTCCTATATATGCCTACATACCCC 59.219 48.000 0.00 0.00 41.50 4.95
2270 2283 5.723355 TCCTATATATGCCTACATACCCCC 58.277 45.833 0.00 0.00 41.50 5.40
2271 2284 5.199047 TCCTATATATGCCTACATACCCCCA 59.801 44.000 0.00 0.00 41.50 4.96
2272 2285 5.908831 CCTATATATGCCTACATACCCCCAA 59.091 44.000 0.00 0.00 41.50 4.12
2273 2286 6.388689 CCTATATATGCCTACATACCCCCAAA 59.611 42.308 0.00 0.00 41.50 3.28
2274 2287 2.748209 ATGCCTACATACCCCCAAAC 57.252 50.000 0.00 0.00 33.67 2.93
2275 2288 1.676248 TGCCTACATACCCCCAAACT 58.324 50.000 0.00 0.00 0.00 2.66
2276 2289 2.848242 TGCCTACATACCCCCAAACTA 58.152 47.619 0.00 0.00 0.00 2.24
2277 2290 3.399454 TGCCTACATACCCCCAAACTAT 58.601 45.455 0.00 0.00 0.00 2.12
2278 2291 3.393278 TGCCTACATACCCCCAAACTATC 59.607 47.826 0.00 0.00 0.00 2.08
2279 2292 3.393278 GCCTACATACCCCCAAACTATCA 59.607 47.826 0.00 0.00 0.00 2.15
2280 2293 4.505039 GCCTACATACCCCCAAACTATCAG 60.505 50.000 0.00 0.00 0.00 2.90
2281 2294 4.905456 CCTACATACCCCCAAACTATCAGA 59.095 45.833 0.00 0.00 0.00 3.27
2282 2295 5.548056 CCTACATACCCCCAAACTATCAGAT 59.452 44.000 0.00 0.00 0.00 2.90
2283 2296 5.310409 ACATACCCCCAAACTATCAGATG 57.690 43.478 0.00 0.00 0.00 2.90
2284 2297 2.736670 ACCCCCAAACTATCAGATGC 57.263 50.000 0.00 0.00 0.00 3.91
2285 2298 1.134098 ACCCCCAAACTATCAGATGCG 60.134 52.381 0.00 0.00 0.00 4.73
2286 2299 1.597742 CCCCAAACTATCAGATGCGG 58.402 55.000 0.00 0.00 0.00 5.69
2287 2300 1.140852 CCCCAAACTATCAGATGCGGA 59.859 52.381 0.00 0.00 0.00 5.54
2288 2301 2.487934 CCCAAACTATCAGATGCGGAG 58.512 52.381 0.00 0.00 0.00 4.63
2304 2317 3.503827 CGGAGCCAAAAACCTAATTCC 57.496 47.619 0.00 0.00 0.00 3.01
2305 2318 2.823154 CGGAGCCAAAAACCTAATTCCA 59.177 45.455 0.00 0.00 0.00 3.53
2306 2319 3.366985 CGGAGCCAAAAACCTAATTCCAC 60.367 47.826 0.00 0.00 0.00 4.02
2307 2320 3.056107 GGAGCCAAAAACCTAATTCCACC 60.056 47.826 0.00 0.00 0.00 4.61
2308 2321 2.560981 AGCCAAAAACCTAATTCCACCG 59.439 45.455 0.00 0.00 0.00 4.94
2309 2322 2.929161 GCCAAAAACCTAATTCCACCGC 60.929 50.000 0.00 0.00 0.00 5.68
2310 2323 2.353307 CCAAAAACCTAATTCCACCGCC 60.353 50.000 0.00 0.00 0.00 6.13
2311 2324 1.170442 AAAACCTAATTCCACCGCCG 58.830 50.000 0.00 0.00 0.00 6.46
2312 2325 1.310216 AAACCTAATTCCACCGCCGC 61.310 55.000 0.00 0.00 0.00 6.53
2313 2326 2.124901 CCTAATTCCACCGCCGCA 60.125 61.111 0.00 0.00 0.00 5.69
2314 2327 1.747367 CCTAATTCCACCGCCGCAA 60.747 57.895 0.00 0.00 0.00 4.85
2315 2328 1.427819 CTAATTCCACCGCCGCAAC 59.572 57.895 0.00 0.00 0.00 4.17
2316 2329 1.003112 TAATTCCACCGCCGCAACT 60.003 52.632 0.00 0.00 0.00 3.16
2317 2330 0.606944 TAATTCCACCGCCGCAACTT 60.607 50.000 0.00 0.00 0.00 2.66
2318 2331 1.460273 AATTCCACCGCCGCAACTTT 61.460 50.000 0.00 0.00 0.00 2.66
2319 2332 1.862602 ATTCCACCGCCGCAACTTTC 61.863 55.000 0.00 0.00 0.00 2.62
2320 2333 2.951475 TTCCACCGCCGCAACTTTCT 62.951 55.000 0.00 0.00 0.00 2.52
2321 2334 2.252260 CACCGCCGCAACTTTCTG 59.748 61.111 0.00 0.00 0.00 3.02
2322 2335 2.203153 ACCGCCGCAACTTTCTGT 60.203 55.556 0.00 0.00 0.00 3.41
2323 2336 1.070105 ACCGCCGCAACTTTCTGTA 59.930 52.632 0.00 0.00 0.00 2.74
2324 2337 0.321298 ACCGCCGCAACTTTCTGTAT 60.321 50.000 0.00 0.00 0.00 2.29
2325 2338 0.373716 CCGCCGCAACTTTCTGTATC 59.626 55.000 0.00 0.00 0.00 2.24
2326 2339 0.373716 CGCCGCAACTTTCTGTATCC 59.626 55.000 0.00 0.00 0.00 2.59
2327 2340 1.448985 GCCGCAACTTTCTGTATCCA 58.551 50.000 0.00 0.00 0.00 3.41
2328 2341 1.130561 GCCGCAACTTTCTGTATCCAC 59.869 52.381 0.00 0.00 0.00 4.02
2329 2342 1.393539 CCGCAACTTTCTGTATCCACG 59.606 52.381 0.00 0.00 0.00 4.94
2330 2343 2.333926 CGCAACTTTCTGTATCCACGA 58.666 47.619 0.00 0.00 0.00 4.35
2331 2344 2.345641 CGCAACTTTCTGTATCCACGAG 59.654 50.000 0.00 0.00 0.00 4.18
2332 2345 3.585862 GCAACTTTCTGTATCCACGAGA 58.414 45.455 0.00 0.00 0.00 4.04
2333 2346 4.184629 GCAACTTTCTGTATCCACGAGAT 58.815 43.478 0.00 0.00 39.15 2.75
2334 2347 4.268884 GCAACTTTCTGTATCCACGAGATC 59.731 45.833 0.00 0.00 36.33 2.75
2335 2348 4.657436 ACTTTCTGTATCCACGAGATCC 57.343 45.455 0.00 0.00 36.33 3.36
2336 2349 3.385111 ACTTTCTGTATCCACGAGATCCC 59.615 47.826 0.00 0.00 36.33 3.85
2337 2350 2.748209 TCTGTATCCACGAGATCCCA 57.252 50.000 0.00 0.00 36.33 4.37
2338 2351 3.244887 TCTGTATCCACGAGATCCCAT 57.755 47.619 0.00 0.00 36.33 4.00
2339 2352 3.157881 TCTGTATCCACGAGATCCCATC 58.842 50.000 0.00 0.00 36.33 3.51
2340 2353 3.161067 CTGTATCCACGAGATCCCATCT 58.839 50.000 0.00 0.00 43.70 2.90
2341 2354 3.576118 CTGTATCCACGAGATCCCATCTT 59.424 47.826 0.00 0.00 40.38 2.40
2342 2355 3.321968 TGTATCCACGAGATCCCATCTTG 59.678 47.826 0.00 0.00 44.72 3.02
2343 2356 1.123077 TCCACGAGATCCCATCTTGG 58.877 55.000 5.85 2.66 43.70 3.61
2352 2365 4.344237 CCATCTTGGGGCCTGTTC 57.656 61.111 0.84 0.00 32.67 3.18
2353 2366 1.380380 CCATCTTGGGGCCTGTTCC 60.380 63.158 0.84 0.00 32.67 3.62
2354 2367 1.750399 CATCTTGGGGCCTGTTCCG 60.750 63.158 0.84 0.00 0.00 4.30
2355 2368 2.983879 ATCTTGGGGCCTGTTCCGG 61.984 63.158 0.84 0.00 0.00 5.14
2356 2369 3.646715 CTTGGGGCCTGTTCCGGA 61.647 66.667 0.00 0.00 0.00 5.14
2357 2370 3.628646 CTTGGGGCCTGTTCCGGAG 62.629 68.421 3.34 0.00 0.00 4.63
2360 2373 4.475135 GGGCCTGTTCCGGAGCTC 62.475 72.222 19.73 8.80 0.00 4.09
2361 2374 4.475135 GGCCTGTTCCGGAGCTCC 62.475 72.222 23.79 23.79 0.00 4.70
2381 2394 3.466881 CGGAGGGGGCATCGATTA 58.533 61.111 0.00 0.00 0.00 1.75
2382 2395 1.004918 CGGAGGGGGCATCGATTAC 60.005 63.158 0.00 0.00 0.00 1.89
2383 2396 1.004918 GGAGGGGGCATCGATTACG 60.005 63.158 0.00 0.00 41.26 3.18
2395 2408 3.705043 TCGATTACGAAGGGCTTCTAC 57.295 47.619 0.00 0.00 45.74 2.59
2396 2409 3.018856 TCGATTACGAAGGGCTTCTACA 58.981 45.455 0.00 0.00 45.74 2.74
2397 2410 3.635373 TCGATTACGAAGGGCTTCTACAT 59.365 43.478 0.00 0.00 45.74 2.29
2398 2411 3.982058 CGATTACGAAGGGCTTCTACATC 59.018 47.826 0.00 0.00 42.66 3.06
2399 2412 4.499188 CGATTACGAAGGGCTTCTACATCA 60.499 45.833 0.00 0.00 42.66 3.07
2400 2413 5.542779 GATTACGAAGGGCTTCTACATCAT 58.457 41.667 0.00 0.00 37.44 2.45
2401 2414 3.460857 ACGAAGGGCTTCTACATCATC 57.539 47.619 0.00 0.00 37.44 2.92
2402 2415 2.766263 ACGAAGGGCTTCTACATCATCA 59.234 45.455 0.00 0.00 37.44 3.07
2403 2416 3.126831 CGAAGGGCTTCTACATCATCAC 58.873 50.000 0.00 0.00 37.44 3.06
2404 2417 3.471680 GAAGGGCTTCTACATCATCACC 58.528 50.000 0.00 0.00 36.69 4.02
2405 2418 2.481441 AGGGCTTCTACATCATCACCA 58.519 47.619 0.00 0.00 0.00 4.17
2406 2419 3.051581 AGGGCTTCTACATCATCACCAT 58.948 45.455 0.00 0.00 0.00 3.55
2407 2420 4.234550 AGGGCTTCTACATCATCACCATA 58.765 43.478 0.00 0.00 0.00 2.74
2408 2421 4.285517 AGGGCTTCTACATCATCACCATAG 59.714 45.833 0.00 0.00 0.00 2.23
2409 2422 3.999663 GGCTTCTACATCATCACCATAGC 59.000 47.826 0.00 0.00 0.00 2.97
2410 2423 3.999663 GCTTCTACATCATCACCATAGCC 59.000 47.826 0.00 0.00 0.00 3.93
2411 2424 4.573900 CTTCTACATCATCACCATAGCCC 58.426 47.826 0.00 0.00 0.00 5.19
2412 2425 2.906389 TCTACATCATCACCATAGCCCC 59.094 50.000 0.00 0.00 0.00 5.80
2413 2426 1.825105 ACATCATCACCATAGCCCCT 58.175 50.000 0.00 0.00 0.00 4.79
2414 2427 1.701847 ACATCATCACCATAGCCCCTC 59.298 52.381 0.00 0.00 0.00 4.30
2415 2428 1.004044 CATCATCACCATAGCCCCTCC 59.996 57.143 0.00 0.00 0.00 4.30
2416 2429 1.121407 TCATCACCATAGCCCCTCCG 61.121 60.000 0.00 0.00 0.00 4.63
2417 2430 1.121407 CATCACCATAGCCCCTCCGA 61.121 60.000 0.00 0.00 0.00 4.55
2418 2431 0.178891 ATCACCATAGCCCCTCCGAT 60.179 55.000 0.00 0.00 0.00 4.18
2419 2432 1.121407 TCACCATAGCCCCTCCGATG 61.121 60.000 0.00 0.00 0.00 3.84
2420 2433 1.121407 CACCATAGCCCCTCCGATGA 61.121 60.000 0.00 0.00 0.00 2.92
2421 2434 0.399949 ACCATAGCCCCTCCGATGAA 60.400 55.000 0.00 0.00 0.00 2.57
2422 2435 0.322975 CCATAGCCCCTCCGATGAAG 59.677 60.000 0.00 0.00 0.00 3.02
2423 2436 1.051812 CATAGCCCCTCCGATGAAGT 58.948 55.000 0.00 0.00 0.00 3.01
2424 2437 1.051812 ATAGCCCCTCCGATGAAGTG 58.948 55.000 0.00 0.00 0.00 3.16
2425 2438 0.325296 TAGCCCCTCCGATGAAGTGT 60.325 55.000 0.00 0.00 0.00 3.55
2426 2439 1.450312 GCCCCTCCGATGAAGTGTG 60.450 63.158 0.00 0.00 0.00 3.82
2427 2440 1.899437 GCCCCTCCGATGAAGTGTGA 61.899 60.000 0.00 0.00 0.00 3.58
2428 2441 0.176680 CCCCTCCGATGAAGTGTGAG 59.823 60.000 0.00 0.00 0.00 3.51
2429 2442 0.898320 CCCTCCGATGAAGTGTGAGT 59.102 55.000 0.00 0.00 0.00 3.41
2430 2443 2.100197 CCCTCCGATGAAGTGTGAGTA 58.900 52.381 0.00 0.00 0.00 2.59
2431 2444 2.099921 CCCTCCGATGAAGTGTGAGTAG 59.900 54.545 0.00 0.00 0.00 2.57
2432 2445 2.755655 CCTCCGATGAAGTGTGAGTAGT 59.244 50.000 0.00 0.00 0.00 2.73
2433 2446 3.193691 CCTCCGATGAAGTGTGAGTAGTT 59.806 47.826 0.00 0.00 0.00 2.24
2434 2447 4.322049 CCTCCGATGAAGTGTGAGTAGTTT 60.322 45.833 0.00 0.00 0.00 2.66
2435 2448 5.105877 CCTCCGATGAAGTGTGAGTAGTTTA 60.106 44.000 0.00 0.00 0.00 2.01
2436 2449 5.706916 TCCGATGAAGTGTGAGTAGTTTAC 58.293 41.667 0.00 0.00 0.00 2.01
2437 2450 4.863131 CCGATGAAGTGTGAGTAGTTTACC 59.137 45.833 0.00 0.00 0.00 2.85
2438 2451 5.336531 CCGATGAAGTGTGAGTAGTTTACCT 60.337 44.000 0.00 0.00 0.00 3.08
2439 2452 5.800941 CGATGAAGTGTGAGTAGTTTACCTC 59.199 44.000 0.00 0.00 0.00 3.85
2440 2453 6.569801 CGATGAAGTGTGAGTAGTTTACCTCA 60.570 42.308 0.00 0.00 0.00 3.86
2441 2454 6.085555 TGAAGTGTGAGTAGTTTACCTCAG 57.914 41.667 0.00 0.00 0.00 3.35
2442 2455 5.831525 TGAAGTGTGAGTAGTTTACCTCAGA 59.168 40.000 0.00 0.00 0.00 3.27
2443 2456 5.708877 AGTGTGAGTAGTTTACCTCAGAC 57.291 43.478 8.41 8.41 39.44 3.51
2444 2457 4.523558 AGTGTGAGTAGTTTACCTCAGACC 59.476 45.833 11.79 0.00 39.81 3.85
2445 2458 4.523558 GTGTGAGTAGTTTACCTCAGACCT 59.476 45.833 5.84 0.00 35.10 3.85
2446 2459 5.709164 GTGTGAGTAGTTTACCTCAGACCTA 59.291 44.000 5.84 0.00 35.10 3.08
2447 2460 5.709164 TGTGAGTAGTTTACCTCAGACCTAC 59.291 44.000 0.00 0.00 0.00 3.18
2448 2461 4.940046 TGAGTAGTTTACCTCAGACCTACG 59.060 45.833 0.00 0.00 0.00 3.51
2449 2462 4.268359 AGTAGTTTACCTCAGACCTACGG 58.732 47.826 0.00 0.00 0.00 4.02
2450 2463 2.454538 AGTTTACCTCAGACCTACGGG 58.545 52.381 0.00 0.00 38.88 5.28
2465 2478 5.128205 ACCTACGGGTCCATTTTTATTAGC 58.872 41.667 0.00 0.00 43.38 3.09
2466 2479 5.104235 ACCTACGGGTCCATTTTTATTAGCT 60.104 40.000 0.00 0.00 43.38 3.32
2467 2480 6.100134 ACCTACGGGTCCATTTTTATTAGCTA 59.900 38.462 0.00 0.00 43.38 3.32
2468 2481 6.649557 CCTACGGGTCCATTTTTATTAGCTAG 59.350 42.308 0.00 0.00 0.00 3.42
2469 2482 6.243216 ACGGGTCCATTTTTATTAGCTAGA 57.757 37.500 0.00 0.00 0.00 2.43
2470 2483 6.838382 ACGGGTCCATTTTTATTAGCTAGAT 58.162 36.000 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 2.022934 GGAATAGGAGAAGACGACCGT 58.977 52.381 0.00 0.00 0.00 4.83
108 109 2.308690 GTAGAGAAGGTAGGGCGACAT 58.691 52.381 0.00 0.00 0.00 3.06
111 112 0.106318 GGGTAGAGAAGGTAGGGCGA 60.106 60.000 0.00 0.00 0.00 5.54
118 119 0.988678 GCCATGGGGGTAGAGAAGGT 60.989 60.000 15.13 0.00 39.65 3.50
124 125 1.692749 GTGAGGCCATGGGGGTAGA 60.693 63.158 15.13 0.00 39.65 2.59
127 128 3.017581 GAGTGAGGCCATGGGGGT 61.018 66.667 15.13 0.00 39.65 4.95
171 173 0.463620 GAGCGAGCAAGGAGGAGAAT 59.536 55.000 0.00 0.00 0.00 2.40
182 184 3.889044 GACGGGATCGAGCGAGCA 61.889 66.667 10.40 0.00 40.11 4.26
200 202 1.402984 GCGTCTGACTTCGTCCAGATT 60.403 52.381 6.21 0.00 0.00 2.40
395 397 3.487202 GCGGCGCAGATCAAACGA 61.487 61.111 29.21 0.00 0.00 3.85
480 482 3.971245 AGAGCAAACGAGAGGAGAAAT 57.029 42.857 0.00 0.00 0.00 2.17
485 487 2.910688 AACAAGAGCAAACGAGAGGA 57.089 45.000 0.00 0.00 0.00 3.71
811 816 2.584391 GGGGCGAGCGAAGGGATAT 61.584 63.158 0.00 0.00 0.00 1.63
1132 1137 1.448922 CTACTCCGGCTCCTTCTCGG 61.449 65.000 0.00 0.00 44.59 4.63
1157 1162 4.726416 CGATTCTTTCCAATTGTGACCTG 58.274 43.478 4.43 0.00 0.00 4.00
1227 1237 4.402616 TTGAAGGAAATCACCCTCCATT 57.597 40.909 0.00 0.00 33.83 3.16
1311 1322 9.761504 TTTGCATAGAAATCAGTTCAAAAATCA 57.238 25.926 0.00 0.00 38.86 2.57
1367 1378 1.001181 GTCACAAACGGGCAGGTACTA 59.999 52.381 0.00 0.00 36.02 1.82
1705 1718 8.025243 TCAAAAATTGTAGATACGTTGGAGAC 57.975 34.615 0.00 0.00 0.00 3.36
1706 1719 8.786826 ATCAAAAATTGTAGATACGTTGGAGA 57.213 30.769 0.00 0.00 0.00 3.71
1707 1720 9.277565 CAATCAAAAATTGTAGATACGTTGGAG 57.722 33.333 0.00 0.00 0.00 3.86
1708 1721 7.753132 GCAATCAAAAATTGTAGATACGTTGGA 59.247 33.333 0.00 0.00 0.00 3.53
1709 1722 7.754924 AGCAATCAAAAATTGTAGATACGTTGG 59.245 33.333 0.00 0.00 0.00 3.77
1710 1723 8.673626 AGCAATCAAAAATTGTAGATACGTTG 57.326 30.769 0.00 0.00 0.00 4.10
1711 1724 7.968405 GGAGCAATCAAAAATTGTAGATACGTT 59.032 33.333 0.00 0.00 0.00 3.99
1712 1725 7.120579 TGGAGCAATCAAAAATTGTAGATACGT 59.879 33.333 0.00 0.00 0.00 3.57
1713 1726 7.471721 TGGAGCAATCAAAAATTGTAGATACG 58.528 34.615 0.30 0.00 0.00 3.06
1714 1727 9.241317 CATGGAGCAATCAAAAATTGTAGATAC 57.759 33.333 0.30 0.00 0.00 2.24
1715 1728 7.922278 GCATGGAGCAATCAAAAATTGTAGATA 59.078 33.333 0.00 0.00 44.79 1.98
1716 1729 6.759827 GCATGGAGCAATCAAAAATTGTAGAT 59.240 34.615 0.00 0.00 44.79 1.98
1717 1730 6.101332 GCATGGAGCAATCAAAAATTGTAGA 58.899 36.000 0.00 0.00 44.79 2.59
1718 1731 6.340537 GCATGGAGCAATCAAAAATTGTAG 57.659 37.500 0.00 0.00 44.79 2.74
1733 1746 9.442047 AAAACAGTAGATAATATAGCATGGAGC 57.558 33.333 0.00 0.00 46.19 4.70
1735 1748 9.725019 CCAAAACAGTAGATAATATAGCATGGA 57.275 33.333 0.00 0.00 0.00 3.41
1736 1749 9.725019 TCCAAAACAGTAGATAATATAGCATGG 57.275 33.333 0.00 0.00 0.00 3.66
1746 1759 9.184523 CCCAATAATGTCCAAAACAGTAGATAA 57.815 33.333 0.00 0.00 41.35 1.75
1747 1760 7.284489 GCCCAATAATGTCCAAAACAGTAGATA 59.716 37.037 0.00 0.00 41.35 1.98
1748 1761 6.096846 GCCCAATAATGTCCAAAACAGTAGAT 59.903 38.462 0.00 0.00 41.35 1.98
1749 1762 5.417580 GCCCAATAATGTCCAAAACAGTAGA 59.582 40.000 0.00 0.00 41.35 2.59
1750 1763 5.418840 AGCCCAATAATGTCCAAAACAGTAG 59.581 40.000 0.00 0.00 41.35 2.57
1751 1764 5.329399 AGCCCAATAATGTCCAAAACAGTA 58.671 37.500 0.00 0.00 42.17 2.74
1752 1765 4.159557 AGCCCAATAATGTCCAAAACAGT 58.840 39.130 0.00 0.00 42.37 3.55
1753 1766 4.806640 AGCCCAATAATGTCCAAAACAG 57.193 40.909 0.00 0.00 42.37 3.16
1754 1767 5.559148 AAAGCCCAATAATGTCCAAAACA 57.441 34.783 0.00 0.00 43.51 2.83
1755 1768 9.830975 ATAATAAAGCCCAATAATGTCCAAAAC 57.169 29.630 0.00 0.00 0.00 2.43
1756 1769 9.829507 CATAATAAAGCCCAATAATGTCCAAAA 57.170 29.630 0.00 0.00 0.00 2.44
1757 1770 7.930865 GCATAATAAAGCCCAATAATGTCCAAA 59.069 33.333 0.00 0.00 0.00 3.28
1758 1771 7.070447 TGCATAATAAAGCCCAATAATGTCCAA 59.930 33.333 0.00 0.00 0.00 3.53
1759 1772 6.552725 TGCATAATAAAGCCCAATAATGTCCA 59.447 34.615 0.00 0.00 0.00 4.02
1760 1773 6.868339 GTGCATAATAAAGCCCAATAATGTCC 59.132 38.462 0.00 0.00 0.00 4.02
1761 1774 7.661040 AGTGCATAATAAAGCCCAATAATGTC 58.339 34.615 0.00 0.00 0.00 3.06
1762 1775 7.601705 AGTGCATAATAAAGCCCAATAATGT 57.398 32.000 0.00 0.00 0.00 2.71
1763 1776 8.891671 AAAGTGCATAATAAAGCCCAATAATG 57.108 30.769 0.00 0.00 0.00 1.90
1793 1806 9.176460 CGGTTAATAGGTTAGTCCCAAAAATAA 57.824 33.333 0.00 0.00 36.75 1.40
1794 1807 7.774625 CCGGTTAATAGGTTAGTCCCAAAAATA 59.225 37.037 0.00 0.00 36.75 1.40
1795 1808 6.604396 CCGGTTAATAGGTTAGTCCCAAAAAT 59.396 38.462 0.00 0.00 36.75 1.82
1796 1809 5.945191 CCGGTTAATAGGTTAGTCCCAAAAA 59.055 40.000 0.00 0.00 36.75 1.94
1797 1810 5.250313 TCCGGTTAATAGGTTAGTCCCAAAA 59.750 40.000 0.00 0.00 36.75 2.44
1798 1811 4.782156 TCCGGTTAATAGGTTAGTCCCAAA 59.218 41.667 0.00 0.00 36.75 3.28
1799 1812 4.360889 TCCGGTTAATAGGTTAGTCCCAA 58.639 43.478 0.00 0.00 36.75 4.12
1800 1813 3.962718 CTCCGGTTAATAGGTTAGTCCCA 59.037 47.826 0.00 0.00 36.75 4.37
1801 1814 3.323115 CCTCCGGTTAATAGGTTAGTCCC 59.677 52.174 0.00 0.00 36.75 4.46
1802 1815 3.244009 GCCTCCGGTTAATAGGTTAGTCC 60.244 52.174 0.00 0.00 32.67 3.85
1803 1816 3.244009 GGCCTCCGGTTAATAGGTTAGTC 60.244 52.174 0.00 0.00 32.67 2.59
1804 1817 2.702478 GGCCTCCGGTTAATAGGTTAGT 59.298 50.000 0.00 0.00 32.67 2.24
1805 1818 2.038164 GGGCCTCCGGTTAATAGGTTAG 59.962 54.545 0.84 0.00 32.67 2.34
1806 1819 2.049372 GGGCCTCCGGTTAATAGGTTA 58.951 52.381 0.84 0.00 32.67 2.85
1807 1820 0.841961 GGGCCTCCGGTTAATAGGTT 59.158 55.000 0.84 0.00 32.67 3.50
1808 1821 0.326808 TGGGCCTCCGGTTAATAGGT 60.327 55.000 4.53 0.00 35.24 3.08
1809 1822 0.396811 CTGGGCCTCCGGTTAATAGG 59.603 60.000 4.53 0.51 34.69 2.57
1810 1823 0.250338 GCTGGGCCTCCGGTTAATAG 60.250 60.000 4.53 0.00 41.53 1.73
1811 1824 1.702022 GGCTGGGCCTCCGGTTAATA 61.702 60.000 4.53 0.00 46.69 0.98
1812 1825 2.595655 GCTGGGCCTCCGGTTAAT 59.404 61.111 4.53 0.00 41.53 1.40
1813 1826 3.723922 GGCTGGGCCTCCGGTTAA 61.724 66.667 4.53 0.00 46.69 2.01
1823 1836 2.363406 AGCAATTCTGGGCTGGGC 60.363 61.111 0.00 0.00 39.30 5.36
1843 1856 4.159879 TCGAAACCCTAAAACAGGCAAAAA 59.840 37.500 0.00 0.00 43.98 1.94
1844 1857 3.700038 TCGAAACCCTAAAACAGGCAAAA 59.300 39.130 0.00 0.00 43.98 2.44
1845 1858 3.288964 TCGAAACCCTAAAACAGGCAAA 58.711 40.909 0.00 0.00 43.98 3.68
1846 1859 2.933573 TCGAAACCCTAAAACAGGCAA 58.066 42.857 0.00 0.00 43.98 4.52
1847 1860 2.642154 TCGAAACCCTAAAACAGGCA 57.358 45.000 0.00 0.00 43.98 4.75
1848 1861 3.143728 TCTTCGAAACCCTAAAACAGGC 58.856 45.455 0.00 0.00 43.98 4.85
1849 1862 5.761165 TTTCTTCGAAACCCTAAAACAGG 57.239 39.130 0.00 0.00 45.07 4.00
1850 1863 6.038936 TCCTTTTCTTCGAAACCCTAAAACAG 59.961 38.462 0.00 0.00 0.00 3.16
1851 1864 5.887035 TCCTTTTCTTCGAAACCCTAAAACA 59.113 36.000 0.00 0.00 0.00 2.83
1852 1865 6.381481 TCCTTTTCTTCGAAACCCTAAAAC 57.619 37.500 0.00 0.00 0.00 2.43
1853 1866 7.591421 ATTCCTTTTCTTCGAAACCCTAAAA 57.409 32.000 0.00 1.38 0.00 1.52
1854 1867 8.873186 ATATTCCTTTTCTTCGAAACCCTAAA 57.127 30.769 0.00 0.00 0.00 1.85
1855 1868 8.104566 TGATATTCCTTTTCTTCGAAACCCTAA 58.895 33.333 0.00 0.00 0.00 2.69
1856 1869 7.626390 TGATATTCCTTTTCTTCGAAACCCTA 58.374 34.615 0.00 0.00 0.00 3.53
1857 1870 6.481643 TGATATTCCTTTTCTTCGAAACCCT 58.518 36.000 0.00 0.00 0.00 4.34
1858 1871 6.753107 TGATATTCCTTTTCTTCGAAACCC 57.247 37.500 0.00 0.00 0.00 4.11
1859 1872 7.270579 CGTTTGATATTCCTTTTCTTCGAAACC 59.729 37.037 0.00 0.00 0.00 3.27
1860 1873 7.270579 CCGTTTGATATTCCTTTTCTTCGAAAC 59.729 37.037 0.00 0.00 0.00 2.78
1861 1874 7.173562 TCCGTTTGATATTCCTTTTCTTCGAAA 59.826 33.333 0.00 0.00 0.00 3.46
1862 1875 6.651643 TCCGTTTGATATTCCTTTTCTTCGAA 59.348 34.615 0.00 0.00 0.00 3.71
1863 1876 6.167685 TCCGTTTGATATTCCTTTTCTTCGA 58.832 36.000 0.00 0.00 0.00 3.71
1864 1877 6.092259 ACTCCGTTTGATATTCCTTTTCTTCG 59.908 38.462 0.00 0.00 0.00 3.79
1865 1878 7.379098 ACTCCGTTTGATATTCCTTTTCTTC 57.621 36.000 0.00 0.00 0.00 2.87
1866 1879 7.881232 TGTACTCCGTTTGATATTCCTTTTCTT 59.119 33.333 0.00 0.00 0.00 2.52
1867 1880 7.391620 TGTACTCCGTTTGATATTCCTTTTCT 58.608 34.615 0.00 0.00 0.00 2.52
1868 1881 7.605410 TGTACTCCGTTTGATATTCCTTTTC 57.395 36.000 0.00 0.00 0.00 2.29
1869 1882 7.361799 GCTTGTACTCCGTTTGATATTCCTTTT 60.362 37.037 0.00 0.00 0.00 2.27
1870 1883 6.093633 GCTTGTACTCCGTTTGATATTCCTTT 59.906 38.462 0.00 0.00 0.00 3.11
1871 1884 5.585047 GCTTGTACTCCGTTTGATATTCCTT 59.415 40.000 0.00 0.00 0.00 3.36
1872 1885 5.116882 GCTTGTACTCCGTTTGATATTCCT 58.883 41.667 0.00 0.00 0.00 3.36
1873 1886 4.025979 CGCTTGTACTCCGTTTGATATTCC 60.026 45.833 0.00 0.00 0.00 3.01
1874 1887 4.565564 ACGCTTGTACTCCGTTTGATATTC 59.434 41.667 0.00 0.00 0.00 1.75
1875 1888 4.501071 ACGCTTGTACTCCGTTTGATATT 58.499 39.130 0.00 0.00 0.00 1.28
1876 1889 4.119442 ACGCTTGTACTCCGTTTGATAT 57.881 40.909 0.00 0.00 0.00 1.63
1877 1890 3.581024 ACGCTTGTACTCCGTTTGATA 57.419 42.857 0.00 0.00 0.00 2.15
1878 1891 2.450609 ACGCTTGTACTCCGTTTGAT 57.549 45.000 0.00 0.00 0.00 2.57
1879 1892 3.367992 TTACGCTTGTACTCCGTTTGA 57.632 42.857 10.32 0.00 36.51 2.69
1880 1893 3.676172 TCATTACGCTTGTACTCCGTTTG 59.324 43.478 10.32 9.21 36.51 2.93
1881 1894 3.916761 TCATTACGCTTGTACTCCGTTT 58.083 40.909 10.32 0.00 36.51 3.60
1882 1895 3.581024 TCATTACGCTTGTACTCCGTT 57.419 42.857 10.32 0.00 36.51 4.44
1883 1896 3.581024 TTCATTACGCTTGTACTCCGT 57.419 42.857 10.02 10.02 38.84 4.69
1884 1897 3.924686 AGTTTCATTACGCTTGTACTCCG 59.075 43.478 0.00 0.00 0.00 4.63
1885 1898 5.857822 AAGTTTCATTACGCTTGTACTCC 57.142 39.130 0.00 0.00 0.00 3.85
1886 1899 6.007677 CGAAAGTTTCATTACGCTTGTACTC 58.992 40.000 15.67 0.00 0.00 2.59
1887 1900 5.107220 CCGAAAGTTTCATTACGCTTGTACT 60.107 40.000 15.67 0.00 0.00 2.73
1888 1901 5.077424 CCGAAAGTTTCATTACGCTTGTAC 58.923 41.667 15.67 0.00 0.00 2.90
1889 1902 4.152759 CCCGAAAGTTTCATTACGCTTGTA 59.847 41.667 15.67 0.00 0.00 2.41
1890 1903 3.058501 CCCGAAAGTTTCATTACGCTTGT 60.059 43.478 15.67 0.00 0.00 3.16
1891 1904 3.187637 TCCCGAAAGTTTCATTACGCTTG 59.812 43.478 15.67 0.00 0.00 4.01
1892 1905 3.404899 TCCCGAAAGTTTCATTACGCTT 58.595 40.909 15.67 0.00 0.00 4.68
1893 1906 3.048337 TCCCGAAAGTTTCATTACGCT 57.952 42.857 15.67 0.00 0.00 5.07
1894 1907 3.817148 TTCCCGAAAGTTTCATTACGC 57.183 42.857 15.67 0.00 0.00 4.42
1906 1919 5.504994 CGTTGAGAAAATCACTTTCCCGAAA 60.505 40.000 0.00 0.00 43.98 3.46
1907 1920 4.024387 CGTTGAGAAAATCACTTTCCCGAA 60.024 41.667 0.00 0.00 43.98 4.30
1908 1921 3.496884 CGTTGAGAAAATCACTTTCCCGA 59.503 43.478 0.00 0.00 43.98 5.14
1909 1922 3.496884 TCGTTGAGAAAATCACTTTCCCG 59.503 43.478 0.00 0.00 43.98 5.14
1910 1923 5.212934 GTTCGTTGAGAAAATCACTTTCCC 58.787 41.667 0.00 0.00 43.98 3.97
1911 1924 5.816919 TGTTCGTTGAGAAAATCACTTTCC 58.183 37.500 0.00 0.00 43.98 3.13
1912 1925 6.414987 CCTTGTTCGTTGAGAAAATCACTTTC 59.585 38.462 0.00 0.00 43.36 2.62
1913 1926 6.265577 CCTTGTTCGTTGAGAAAATCACTTT 58.734 36.000 0.00 0.00 41.10 2.66
1914 1927 5.733373 GCCTTGTTCGTTGAGAAAATCACTT 60.733 40.000 0.00 0.00 41.10 3.16
1915 1928 4.261197 GCCTTGTTCGTTGAGAAAATCACT 60.261 41.667 0.00 0.00 41.10 3.41
1916 1929 3.975035 GCCTTGTTCGTTGAGAAAATCAC 59.025 43.478 0.00 0.00 41.10 3.06
1917 1930 3.004315 GGCCTTGTTCGTTGAGAAAATCA 59.996 43.478 0.00 0.00 41.10 2.57
1918 1931 3.565516 GGCCTTGTTCGTTGAGAAAATC 58.434 45.455 0.00 0.00 41.10 2.17
1919 1932 2.296190 GGGCCTTGTTCGTTGAGAAAAT 59.704 45.455 0.84 0.00 41.10 1.82
1920 1933 1.679153 GGGCCTTGTTCGTTGAGAAAA 59.321 47.619 0.84 0.00 41.10 2.29
1921 1934 1.314730 GGGCCTTGTTCGTTGAGAAA 58.685 50.000 0.84 0.00 41.10 2.52
1922 1935 0.181587 TGGGCCTTGTTCGTTGAGAA 59.818 50.000 4.53 0.00 36.31 2.87
1923 1936 0.250295 CTGGGCCTTGTTCGTTGAGA 60.250 55.000 4.53 0.00 0.00 3.27
1924 1937 1.237285 CCTGGGCCTTGTTCGTTGAG 61.237 60.000 4.53 0.00 0.00 3.02
1925 1938 1.228124 CCTGGGCCTTGTTCGTTGA 60.228 57.895 4.53 0.00 0.00 3.18
1926 1939 1.228124 TCCTGGGCCTTGTTCGTTG 60.228 57.895 4.53 0.00 0.00 4.10
1927 1940 1.073199 CTCCTGGGCCTTGTTCGTT 59.927 57.895 4.53 0.00 0.00 3.85
1928 1941 1.841556 TCTCCTGGGCCTTGTTCGT 60.842 57.895 4.53 0.00 0.00 3.85
1929 1942 1.376037 GTCTCCTGGGCCTTGTTCG 60.376 63.158 4.53 0.00 0.00 3.95
1930 1943 0.402121 AAGTCTCCTGGGCCTTGTTC 59.598 55.000 4.53 0.00 0.00 3.18
1931 1944 0.111253 CAAGTCTCCTGGGCCTTGTT 59.889 55.000 4.53 0.00 31.79 2.83
1932 1945 1.763770 CAAGTCTCCTGGGCCTTGT 59.236 57.895 4.53 0.00 31.79 3.16
1933 1946 1.001641 CCAAGTCTCCTGGGCCTTG 60.002 63.158 4.53 11.51 35.26 3.61
1934 1947 1.151810 TCCAAGTCTCCTGGGCCTT 60.152 57.895 4.53 0.00 30.93 4.35
1935 1948 1.920835 GTCCAAGTCTCCTGGGCCT 60.921 63.158 4.53 0.00 30.93 5.19
1936 1949 2.671682 GTCCAAGTCTCCTGGGCC 59.328 66.667 0.00 0.00 30.93 5.80
1937 1950 2.671682 GGTCCAAGTCTCCTGGGC 59.328 66.667 0.00 0.00 30.93 5.36
1938 1951 3.404773 GGGTCCAAGTCTCCTGGG 58.595 66.667 0.00 0.00 32.31 4.45
2208 2221 4.722700 CAACAGGGGGCCCACGAG 62.723 72.222 26.86 21.32 38.92 4.18
2214 2227 4.066139 ATGGAGCAACAGGGGGCC 62.066 66.667 0.00 0.00 0.00 5.80
2215 2228 2.440980 GATGGAGCAACAGGGGGC 60.441 66.667 0.00 0.00 0.00 5.80
2216 2229 2.124570 CGATGGAGCAACAGGGGG 60.125 66.667 0.00 0.00 0.00 5.40
2217 2230 1.450312 GTCGATGGAGCAACAGGGG 60.450 63.158 0.00 0.00 0.00 4.79
2218 2231 1.811266 CGTCGATGGAGCAACAGGG 60.811 63.158 0.00 0.00 0.00 4.45
2219 2232 0.172578 TACGTCGATGGAGCAACAGG 59.827 55.000 9.90 0.00 0.00 4.00
2220 2233 1.135373 AGTACGTCGATGGAGCAACAG 60.135 52.381 9.90 0.00 0.00 3.16
2221 2234 0.885879 AGTACGTCGATGGAGCAACA 59.114 50.000 9.90 0.00 0.00 3.33
2222 2235 1.546834 GAGTACGTCGATGGAGCAAC 58.453 55.000 9.90 0.00 0.00 4.17
2223 2236 0.454600 GGAGTACGTCGATGGAGCAA 59.545 55.000 9.90 0.00 0.00 3.91
2224 2237 0.393944 AGGAGTACGTCGATGGAGCA 60.394 55.000 9.90 0.00 0.00 4.26
2225 2238 0.739561 AAGGAGTACGTCGATGGAGC 59.260 55.000 9.90 0.00 0.00 4.70
2226 2239 1.334243 GGAAGGAGTACGTCGATGGAG 59.666 57.143 9.90 0.00 0.00 3.86
2227 2240 1.064906 AGGAAGGAGTACGTCGATGGA 60.065 52.381 9.90 0.00 0.00 3.41
2228 2241 1.334243 GAGGAAGGAGTACGTCGATGG 59.666 57.143 9.90 0.00 0.00 3.51
2229 2242 1.334243 GGAGGAAGGAGTACGTCGATG 59.666 57.143 2.26 2.26 0.00 3.84
2230 2243 1.212441 AGGAGGAAGGAGTACGTCGAT 59.788 52.381 0.00 0.00 0.00 3.59
2231 2244 0.617413 AGGAGGAAGGAGTACGTCGA 59.383 55.000 0.00 0.00 0.00 4.20
2232 2245 2.322355 TAGGAGGAAGGAGTACGTCG 57.678 55.000 0.00 0.00 0.00 5.12
2233 2246 6.038492 GCATATATAGGAGGAAGGAGTACGTC 59.962 46.154 0.00 0.00 0.00 4.34
2234 2247 5.887035 GCATATATAGGAGGAAGGAGTACGT 59.113 44.000 0.00 0.00 0.00 3.57
2235 2248 5.299782 GGCATATATAGGAGGAAGGAGTACG 59.700 48.000 0.00 0.00 0.00 3.67
2236 2249 6.436890 AGGCATATATAGGAGGAAGGAGTAC 58.563 44.000 0.00 0.00 0.00 2.73
2237 2250 6.676164 AGGCATATATAGGAGGAAGGAGTA 57.324 41.667 0.00 0.00 0.00 2.59
2238 2251 5.560467 AGGCATATATAGGAGGAAGGAGT 57.440 43.478 0.00 0.00 0.00 3.85
2239 2252 6.436027 TGTAGGCATATATAGGAGGAAGGAG 58.564 44.000 0.00 0.00 0.00 3.69
2240 2253 6.417503 TGTAGGCATATATAGGAGGAAGGA 57.582 41.667 0.00 0.00 0.00 3.36
2241 2254 7.233757 GGTATGTAGGCATATATAGGAGGAAGG 59.766 44.444 0.00 0.00 39.49 3.46
2242 2255 7.233757 GGGTATGTAGGCATATATAGGAGGAAG 59.766 44.444 0.00 0.00 39.49 3.46
2243 2256 7.073854 GGGTATGTAGGCATATATAGGAGGAA 58.926 42.308 0.00 0.00 39.49 3.36
2244 2257 6.412850 GGGGTATGTAGGCATATATAGGAGGA 60.413 46.154 0.00 0.00 39.49 3.71
2245 2258 5.780793 GGGGTATGTAGGCATATATAGGAGG 59.219 48.000 0.00 0.00 39.49 4.30
2246 2259 5.780793 GGGGGTATGTAGGCATATATAGGAG 59.219 48.000 0.00 0.00 39.49 3.69
2247 2260 5.199047 TGGGGGTATGTAGGCATATATAGGA 59.801 44.000 0.00 0.00 39.49 2.94
2248 2261 5.473273 TGGGGGTATGTAGGCATATATAGG 58.527 45.833 0.00 0.00 39.49 2.57
2249 2262 7.127339 AGTTTGGGGGTATGTAGGCATATATAG 59.873 40.741 0.00 0.00 39.49 1.31
2250 2263 6.969443 AGTTTGGGGGTATGTAGGCATATATA 59.031 38.462 0.00 0.00 39.49 0.86
2251 2264 5.795870 AGTTTGGGGGTATGTAGGCATATAT 59.204 40.000 0.00 0.00 39.49 0.86
2252 2265 5.167164 AGTTTGGGGGTATGTAGGCATATA 58.833 41.667 0.00 0.00 39.49 0.86
2253 2266 3.987501 AGTTTGGGGGTATGTAGGCATAT 59.012 43.478 0.00 0.00 39.49 1.78
2254 2267 3.399454 AGTTTGGGGGTATGTAGGCATA 58.601 45.455 0.00 0.00 36.58 3.14
2255 2268 2.214201 AGTTTGGGGGTATGTAGGCAT 58.786 47.619 0.00 0.00 39.03 4.40
2256 2269 1.676248 AGTTTGGGGGTATGTAGGCA 58.324 50.000 0.00 0.00 0.00 4.75
2257 2270 3.393278 TGATAGTTTGGGGGTATGTAGGC 59.607 47.826 0.00 0.00 0.00 3.93
2258 2271 4.905456 TCTGATAGTTTGGGGGTATGTAGG 59.095 45.833 0.00 0.00 0.00 3.18
2259 2272 6.467677 CATCTGATAGTTTGGGGGTATGTAG 58.532 44.000 0.00 0.00 0.00 2.74
2260 2273 5.221843 GCATCTGATAGTTTGGGGGTATGTA 60.222 44.000 0.00 0.00 0.00 2.29
2261 2274 4.446311 GCATCTGATAGTTTGGGGGTATGT 60.446 45.833 0.00 0.00 0.00 2.29
2262 2275 4.074970 GCATCTGATAGTTTGGGGGTATG 58.925 47.826 0.00 0.00 0.00 2.39
2263 2276 3.244561 CGCATCTGATAGTTTGGGGGTAT 60.245 47.826 0.00 0.00 0.00 2.73
2264 2277 2.104111 CGCATCTGATAGTTTGGGGGTA 59.896 50.000 0.00 0.00 0.00 3.69
2265 2278 1.134098 CGCATCTGATAGTTTGGGGGT 60.134 52.381 0.00 0.00 0.00 4.95
2266 2279 1.597742 CGCATCTGATAGTTTGGGGG 58.402 55.000 0.00 0.00 0.00 5.40
2267 2280 1.140852 TCCGCATCTGATAGTTTGGGG 59.859 52.381 5.26 5.26 41.97 4.96
2268 2281 2.487934 CTCCGCATCTGATAGTTTGGG 58.512 52.381 0.00 0.00 0.00 4.12
2269 2282 1.869767 GCTCCGCATCTGATAGTTTGG 59.130 52.381 0.00 0.00 0.00 3.28
2270 2283 1.869767 GGCTCCGCATCTGATAGTTTG 59.130 52.381 0.00 0.00 0.00 2.93
2271 2284 1.486310 TGGCTCCGCATCTGATAGTTT 59.514 47.619 0.00 0.00 0.00 2.66
2272 2285 1.123077 TGGCTCCGCATCTGATAGTT 58.877 50.000 0.00 0.00 0.00 2.24
2273 2286 1.123077 TTGGCTCCGCATCTGATAGT 58.877 50.000 0.00 0.00 0.00 2.12
2274 2287 2.245159 TTTGGCTCCGCATCTGATAG 57.755 50.000 0.00 0.00 0.00 2.08
2275 2288 2.682856 GTTTTTGGCTCCGCATCTGATA 59.317 45.455 0.00 0.00 0.00 2.15
2276 2289 1.474077 GTTTTTGGCTCCGCATCTGAT 59.526 47.619 0.00 0.00 0.00 2.90
2277 2290 0.881118 GTTTTTGGCTCCGCATCTGA 59.119 50.000 0.00 0.00 0.00 3.27
2278 2291 0.109132 GGTTTTTGGCTCCGCATCTG 60.109 55.000 0.00 0.00 0.00 2.90
2279 2292 0.251341 AGGTTTTTGGCTCCGCATCT 60.251 50.000 0.00 0.00 0.00 2.90
2280 2293 1.459450 TAGGTTTTTGGCTCCGCATC 58.541 50.000 0.00 0.00 0.00 3.91
2281 2294 1.917872 TTAGGTTTTTGGCTCCGCAT 58.082 45.000 0.00 0.00 0.00 4.73
2282 2295 1.917872 ATTAGGTTTTTGGCTCCGCA 58.082 45.000 0.00 0.00 0.00 5.69
2283 2296 2.416836 GGAATTAGGTTTTTGGCTCCGC 60.417 50.000 0.00 0.00 0.00 5.54
2284 2297 2.823154 TGGAATTAGGTTTTTGGCTCCG 59.177 45.455 0.00 0.00 0.00 4.63
2285 2298 3.056107 GGTGGAATTAGGTTTTTGGCTCC 60.056 47.826 0.00 0.00 0.00 4.70
2286 2299 3.366985 CGGTGGAATTAGGTTTTTGGCTC 60.367 47.826 0.00 0.00 0.00 4.70
2287 2300 2.560981 CGGTGGAATTAGGTTTTTGGCT 59.439 45.455 0.00 0.00 0.00 4.75
2288 2301 2.929161 GCGGTGGAATTAGGTTTTTGGC 60.929 50.000 0.00 0.00 0.00 4.52
2289 2302 2.353307 GGCGGTGGAATTAGGTTTTTGG 60.353 50.000 0.00 0.00 0.00 3.28
2290 2303 2.669950 CGGCGGTGGAATTAGGTTTTTG 60.670 50.000 0.00 0.00 0.00 2.44
2291 2304 1.542472 CGGCGGTGGAATTAGGTTTTT 59.458 47.619 0.00 0.00 0.00 1.94
2292 2305 1.170442 CGGCGGTGGAATTAGGTTTT 58.830 50.000 0.00 0.00 0.00 2.43
2293 2306 1.310216 GCGGCGGTGGAATTAGGTTT 61.310 55.000 9.78 0.00 0.00 3.27
2294 2307 1.747745 GCGGCGGTGGAATTAGGTT 60.748 57.895 9.78 0.00 0.00 3.50
2295 2308 2.124860 GCGGCGGTGGAATTAGGT 60.125 61.111 9.78 0.00 0.00 3.08
2296 2309 1.747367 TTGCGGCGGTGGAATTAGG 60.747 57.895 9.78 0.00 0.00 2.69
2297 2310 1.024579 AGTTGCGGCGGTGGAATTAG 61.025 55.000 9.78 0.00 0.00 1.73
2298 2311 0.606944 AAGTTGCGGCGGTGGAATTA 60.607 50.000 9.78 0.00 0.00 1.40
2299 2312 1.460273 AAAGTTGCGGCGGTGGAATT 61.460 50.000 9.78 0.00 0.00 2.17
2300 2313 1.862602 GAAAGTTGCGGCGGTGGAAT 61.863 55.000 9.78 0.00 0.00 3.01
2301 2314 2.517402 AAAGTTGCGGCGGTGGAA 60.517 55.556 9.78 0.00 0.00 3.53
2302 2315 2.975799 GAAAGTTGCGGCGGTGGA 60.976 61.111 9.78 0.00 0.00 4.02
2303 2316 2.978010 AGAAAGTTGCGGCGGTGG 60.978 61.111 9.78 0.00 0.00 4.61
2304 2317 1.225376 TACAGAAAGTTGCGGCGGTG 61.225 55.000 9.78 0.00 0.00 4.94
2305 2318 0.321298 ATACAGAAAGTTGCGGCGGT 60.321 50.000 9.78 0.00 0.00 5.68
2306 2319 0.373716 GATACAGAAAGTTGCGGCGG 59.626 55.000 9.78 0.00 0.00 6.13
2307 2320 0.373716 GGATACAGAAAGTTGCGGCG 59.626 55.000 0.51 0.51 0.00 6.46
2308 2321 1.448985 TGGATACAGAAAGTTGCGGC 58.551 50.000 0.00 0.00 46.17 6.53
2315 2328 7.918888 AGATGGGATCTCGTGGATACAGAAAG 61.919 46.154 0.00 0.00 41.87 2.62
2316 2329 6.162871 AGATGGGATCTCGTGGATACAGAAA 61.163 44.000 0.00 0.00 41.87 2.52
2317 2330 4.692777 AGATGGGATCTCGTGGATACAGAA 60.693 45.833 0.00 0.00 41.87 3.02
2318 2331 3.181428 AGATGGGATCTCGTGGATACAGA 60.181 47.826 0.00 0.00 41.87 3.41
2319 2332 3.161067 AGATGGGATCTCGTGGATACAG 58.839 50.000 0.00 0.00 41.87 2.74
2320 2333 3.244887 AGATGGGATCTCGTGGATACA 57.755 47.619 0.00 4.14 39.22 2.29
2321 2334 3.306364 CCAAGATGGGATCTCGTGGATAC 60.306 52.174 9.02 0.00 38.86 2.24
2322 2335 2.899900 CCAAGATGGGATCTCGTGGATA 59.100 50.000 9.02 0.00 38.86 2.59
2323 2336 1.696336 CCAAGATGGGATCTCGTGGAT 59.304 52.381 9.02 0.00 38.86 3.41
2324 2337 1.123077 CCAAGATGGGATCTCGTGGA 58.877 55.000 9.02 0.00 38.86 4.02
2325 2338 3.694364 CCAAGATGGGATCTCGTGG 57.306 57.895 0.00 0.00 39.08 4.94
2335 2348 1.380380 GGAACAGGCCCCAAGATGG 60.380 63.158 0.00 0.00 37.25 3.51
2336 2349 1.750399 CGGAACAGGCCCCAAGATG 60.750 63.158 0.00 0.00 0.00 2.90
2337 2350 2.677228 CGGAACAGGCCCCAAGAT 59.323 61.111 0.00 0.00 0.00 2.40
2338 2351 3.646715 CCGGAACAGGCCCCAAGA 61.647 66.667 0.00 0.00 0.00 3.02
2339 2352 3.628646 CTCCGGAACAGGCCCCAAG 62.629 68.421 5.23 0.00 0.00 3.61
2340 2353 3.646715 CTCCGGAACAGGCCCCAA 61.647 66.667 5.23 0.00 0.00 4.12
2343 2356 4.475135 GAGCTCCGGAACAGGCCC 62.475 72.222 5.23 0.00 0.00 5.80
2344 2357 4.475135 GGAGCTCCGGAACAGGCC 62.475 72.222 19.06 0.00 0.00 5.19
2363 2376 2.214216 TAATCGATGCCCCCTCCGG 61.214 63.158 0.00 0.00 0.00 5.14
2364 2377 1.004918 GTAATCGATGCCCCCTCCG 60.005 63.158 0.00 0.00 0.00 4.63
2365 2378 1.004918 CGTAATCGATGCCCCCTCC 60.005 63.158 0.00 0.00 39.71 4.30
2366 2379 0.391597 TTCGTAATCGATGCCCCCTC 59.608 55.000 0.00 0.00 45.65 4.30
2367 2380 0.393077 CTTCGTAATCGATGCCCCCT 59.607 55.000 0.00 0.00 45.65 4.79
2368 2381 0.602905 CCTTCGTAATCGATGCCCCC 60.603 60.000 0.00 0.00 45.65 5.40
2369 2382 0.602905 CCCTTCGTAATCGATGCCCC 60.603 60.000 0.00 0.00 45.65 5.80
2370 2383 1.228657 GCCCTTCGTAATCGATGCCC 61.229 60.000 0.00 0.00 45.65 5.36
2371 2384 0.249911 AGCCCTTCGTAATCGATGCC 60.250 55.000 0.00 0.00 45.65 4.40
2372 2385 1.527311 GAAGCCCTTCGTAATCGATGC 59.473 52.381 0.00 0.00 45.65 3.91
2373 2386 3.099267 AGAAGCCCTTCGTAATCGATG 57.901 47.619 0.00 0.00 45.65 3.84
2374 2387 3.635373 TGTAGAAGCCCTTCGTAATCGAT 59.365 43.478 0.00 0.00 45.65 3.59
2375 2388 3.018856 TGTAGAAGCCCTTCGTAATCGA 58.981 45.455 2.63 0.00 43.97 3.59
2376 2389 3.431922 TGTAGAAGCCCTTCGTAATCG 57.568 47.619 2.63 0.00 43.97 3.34
2377 2390 4.945246 TGATGTAGAAGCCCTTCGTAATC 58.055 43.478 2.63 7.37 43.97 1.75
2378 2391 5.070446 TGATGATGTAGAAGCCCTTCGTAAT 59.930 40.000 2.63 0.00 43.97 1.89
2379 2392 4.404394 TGATGATGTAGAAGCCCTTCGTAA 59.596 41.667 2.63 0.00 43.97 3.18
2380 2393 3.958147 TGATGATGTAGAAGCCCTTCGTA 59.042 43.478 2.63 0.00 43.97 3.43
2381 2394 2.766263 TGATGATGTAGAAGCCCTTCGT 59.234 45.455 2.63 0.00 43.97 3.85
2382 2395 3.126831 GTGATGATGTAGAAGCCCTTCG 58.873 50.000 2.63 0.00 43.97 3.79
2383 2396 3.118261 TGGTGATGATGTAGAAGCCCTTC 60.118 47.826 0.00 0.00 39.78 3.46
2384 2397 2.846206 TGGTGATGATGTAGAAGCCCTT 59.154 45.455 0.00 0.00 0.00 3.95
2385 2398 2.481441 TGGTGATGATGTAGAAGCCCT 58.519 47.619 0.00 0.00 0.00 5.19
2386 2399 3.498774 ATGGTGATGATGTAGAAGCCC 57.501 47.619 0.00 0.00 0.00 5.19
2387 2400 3.999663 GCTATGGTGATGATGTAGAAGCC 59.000 47.826 0.00 0.00 0.00 4.35
2388 2401 3.999663 GGCTATGGTGATGATGTAGAAGC 59.000 47.826 0.00 0.00 0.00 3.86
2389 2402 4.564406 GGGGCTATGGTGATGATGTAGAAG 60.564 50.000 0.00 0.00 0.00 2.85
2390 2403 3.327757 GGGGCTATGGTGATGATGTAGAA 59.672 47.826 0.00 0.00 0.00 2.10
2391 2404 2.906389 GGGGCTATGGTGATGATGTAGA 59.094 50.000 0.00 0.00 0.00 2.59
2392 2405 2.909006 AGGGGCTATGGTGATGATGTAG 59.091 50.000 0.00 0.00 0.00 2.74
2393 2406 2.906389 GAGGGGCTATGGTGATGATGTA 59.094 50.000 0.00 0.00 0.00 2.29
2394 2407 1.701847 GAGGGGCTATGGTGATGATGT 59.298 52.381 0.00 0.00 0.00 3.06
2395 2408 1.004044 GGAGGGGCTATGGTGATGATG 59.996 57.143 0.00 0.00 0.00 3.07
2396 2409 1.366319 GGAGGGGCTATGGTGATGAT 58.634 55.000 0.00 0.00 0.00 2.45
2397 2410 1.121407 CGGAGGGGCTATGGTGATGA 61.121 60.000 0.00 0.00 0.00 2.92
2398 2411 1.121407 TCGGAGGGGCTATGGTGATG 61.121 60.000 0.00 0.00 0.00 3.07
2399 2412 0.178891 ATCGGAGGGGCTATGGTGAT 60.179 55.000 0.00 0.00 0.00 3.06
2400 2413 1.121407 CATCGGAGGGGCTATGGTGA 61.121 60.000 0.00 0.00 0.00 4.02
2401 2414 1.121407 TCATCGGAGGGGCTATGGTG 61.121 60.000 0.00 0.00 0.00 4.17
2402 2415 0.399949 TTCATCGGAGGGGCTATGGT 60.400 55.000 0.00 0.00 0.00 3.55
2403 2416 0.322975 CTTCATCGGAGGGGCTATGG 59.677 60.000 0.00 0.00 0.00 2.74
2404 2417 1.051812 ACTTCATCGGAGGGGCTATG 58.948 55.000 0.00 0.00 0.00 2.23
2405 2418 1.051812 CACTTCATCGGAGGGGCTAT 58.948 55.000 0.00 0.00 0.00 2.97
2406 2419 0.325296 ACACTTCATCGGAGGGGCTA 60.325 55.000 0.00 0.00 0.00 3.93
2407 2420 1.613630 ACACTTCATCGGAGGGGCT 60.614 57.895 0.00 0.00 0.00 5.19
2408 2421 1.450312 CACACTTCATCGGAGGGGC 60.450 63.158 0.00 0.00 0.00 5.80
2409 2422 0.176680 CTCACACTTCATCGGAGGGG 59.823 60.000 0.00 0.00 0.00 4.79
2410 2423 0.898320 ACTCACACTTCATCGGAGGG 59.102 55.000 0.00 0.00 0.00 4.30
2411 2424 2.755655 ACTACTCACACTTCATCGGAGG 59.244 50.000 0.00 0.00 0.00 4.30
2412 2425 4.442375 AACTACTCACACTTCATCGGAG 57.558 45.455 0.00 0.00 0.00 4.63
2413 2426 4.866508 AAACTACTCACACTTCATCGGA 57.133 40.909 0.00 0.00 0.00 4.55
2414 2427 4.863131 GGTAAACTACTCACACTTCATCGG 59.137 45.833 0.00 0.00 0.00 4.18
2415 2428 5.710984 AGGTAAACTACTCACACTTCATCG 58.289 41.667 0.00 0.00 0.00 3.84
2416 2429 6.688578 TGAGGTAAACTACTCACACTTCATC 58.311 40.000 0.00 0.00 38.71 2.92
2417 2430 6.493802 TCTGAGGTAAACTACTCACACTTCAT 59.506 38.462 0.00 0.00 38.71 2.57
2418 2431 5.831525 TCTGAGGTAAACTACTCACACTTCA 59.168 40.000 0.00 0.00 38.71 3.02
2419 2432 6.151004 GTCTGAGGTAAACTACTCACACTTC 58.849 44.000 0.00 0.00 38.71 3.01
2420 2433 5.010820 GGTCTGAGGTAAACTACTCACACTT 59.989 44.000 0.00 0.00 38.71 3.16
2421 2434 4.523558 GGTCTGAGGTAAACTACTCACACT 59.476 45.833 0.00 0.00 38.71 3.55
2422 2435 4.523558 AGGTCTGAGGTAAACTACTCACAC 59.476 45.833 0.00 0.00 38.71 3.82
2423 2436 4.737578 AGGTCTGAGGTAAACTACTCACA 58.262 43.478 0.00 0.00 38.71 3.58
2424 2437 5.163774 CGTAGGTCTGAGGTAAACTACTCAC 60.164 48.000 0.00 0.00 38.71 3.51
2425 2438 4.940046 CGTAGGTCTGAGGTAAACTACTCA 59.060 45.833 0.00 0.00 41.13 3.41
2426 2439 5.482686 CGTAGGTCTGAGGTAAACTACTC 57.517 47.826 0.00 0.00 31.19 2.59
2444 2457 7.439381 TCTAGCTAATAAAAATGGACCCGTAG 58.561 38.462 0.00 0.00 0.00 3.51
2445 2458 7.364149 TCTAGCTAATAAAAATGGACCCGTA 57.636 36.000 0.00 0.00 0.00 4.02
2446 2459 6.243216 TCTAGCTAATAAAAATGGACCCGT 57.757 37.500 0.00 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.