Multiple sequence alignment - TraesCS6A01G133000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G133000 chr6A 100.000 5700 0 0 1 5700 105177483 105183182 0.000000e+00 10527.0
1 TraesCS6A01G133000 chr6A 96.774 31 1 0 2438 2468 277889708 277889678 1.000000e-02 52.8
2 TraesCS6A01G133000 chr6D 93.921 3290 130 31 2461 5698 87279572 87282843 0.000000e+00 4903.0
3 TraesCS6A01G133000 chr6D 86.650 1236 90 45 638 1835 87277852 87279050 0.000000e+00 1299.0
4 TraesCS6A01G133000 chr6D 91.682 529 43 1 1864 2392 87279046 87279573 0.000000e+00 732.0
5 TraesCS6A01G133000 chr6D 83.600 250 36 4 3218 3467 22180094 22180338 4.440000e-56 230.0
6 TraesCS6A01G133000 chr6D 84.649 228 14 13 258 471 87276737 87276957 2.080000e-49 207.0
7 TraesCS6A01G133000 chr6D 83.544 79 5 5 5 80 87276767 87276840 3.690000e-07 67.6
8 TraesCS6A01G133000 chr6B 92.420 3298 155 40 2462 5698 165330975 165334238 0.000000e+00 4617.0
9 TraesCS6A01G133000 chr6B 87.745 1942 133 53 508 2394 165329086 165330977 0.000000e+00 2170.0
10 TraesCS6A01G133000 chr2B 99.342 152 1 0 92 243 744178289 744178440 5.630000e-70 276.0
11 TraesCS6A01G133000 chr2B 100.000 29 0 0 2438 2466 719529845 719529817 3.000000e-03 54.7
12 TraesCS6A01G133000 chr1B 96.667 150 4 1 91 239 423716531 423716680 1.230000e-61 248.0
13 TraesCS6A01G133000 chr1B 95.333 150 6 1 95 243 423717117 423716968 2.650000e-58 237.0
14 TraesCS6A01G133000 chr4D 100.000 30 0 0 2438 2467 503358008 503358037 7.980000e-04 56.5
15 TraesCS6A01G133000 chr5B 100.000 29 0 0 2438 2466 61540976 61541004 3.000000e-03 54.7
16 TraesCS6A01G133000 chr3A 96.970 33 0 1 2438 2470 41593003 41593034 3.000000e-03 54.7
17 TraesCS6A01G133000 chr3A 94.444 36 1 1 2438 2473 57899649 57899615 3.000000e-03 54.7
18 TraesCS6A01G133000 chr3A 92.308 39 2 1 2438 2475 485009252 485009290 3.000000e-03 54.7
19 TraesCS6A01G133000 chr1A 96.875 32 1 0 2438 2469 208212557 208212526 3.000000e-03 54.7
20 TraesCS6A01G133000 chr1D 96.875 32 0 1 2438 2469 449490191 449490161 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G133000 chr6A 105177483 105183182 5699 False 10527.00 10527 100.0000 1 5700 1 chr6A.!!$F1 5699
1 TraesCS6A01G133000 chr6D 87276737 87282843 6106 False 1441.72 4903 88.0892 5 5698 5 chr6D.!!$F2 5693
2 TraesCS6A01G133000 chr6B 165329086 165334238 5152 False 3393.50 4617 90.0825 508 5698 2 chr6B.!!$F1 5190

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
73 74 0.035056 GAGGAAAGCTAGCTGCCCAA 60.035 55.0 27.56 0.00 44.23 4.12 F
245 246 0.036483 TCCGCATAGCACTGCTCAAA 60.036 50.0 6.86 0.00 40.44 2.69 F
1653 2486 0.034670 AGAAGAAGCAGGCCATGGTC 60.035 55.0 8.79 8.79 39.18 4.02 F
3247 4092 0.611618 ATGGCCGTGAATGGAAGCAA 60.612 50.0 0.00 0.00 0.00 3.91 F
4049 4897 0.531532 CGATGATGGTGCACCTCCTC 60.532 60.0 34.75 26.40 36.82 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1487 2303 0.029035 CAAATCGAGGATGCAGCAGC 59.971 55.000 3.51 0.62 42.57 5.25 R
1882 2715 0.182061 TCAGCCCTTCCATCTGCATC 59.818 55.000 0.00 0.00 0.00 3.91 R
3421 4266 0.320508 GACCGCCCTTTTTCTCGTCT 60.321 55.000 0.00 0.00 0.00 4.18 R
4246 5094 1.065345 TCCTCCTCTGTCTGGTAGTCG 60.065 57.143 0.00 0.00 0.00 4.18 R
5398 6305 0.251474 TGCCTGGCATGCTTTCTTCT 60.251 50.000 19.30 0.00 31.71 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 9.524496 TTACTACTACCTTTTAGATCACAGACA 57.476 33.333 0.00 0.00 0.00 3.41
48 49 8.418597 ACTACTACCTTTTAGATCACAGACAA 57.581 34.615 0.00 0.00 0.00 3.18
49 50 8.867097 ACTACTACCTTTTAGATCACAGACAAA 58.133 33.333 0.00 0.00 0.00 2.83
50 51 7.964604 ACTACCTTTTAGATCACAGACAAAC 57.035 36.000 0.00 0.00 0.00 2.93
51 52 7.506114 ACTACCTTTTAGATCACAGACAAACA 58.494 34.615 0.00 0.00 0.00 2.83
52 53 6.867662 ACCTTTTAGATCACAGACAAACAG 57.132 37.500 0.00 0.00 0.00 3.16
53 54 6.591935 ACCTTTTAGATCACAGACAAACAGA 58.408 36.000 0.00 0.00 0.00 3.41
54 55 6.708054 ACCTTTTAGATCACAGACAAACAGAG 59.292 38.462 0.00 0.00 0.00 3.35
55 56 6.931281 CCTTTTAGATCACAGACAAACAGAGA 59.069 38.462 0.00 0.00 0.00 3.10
56 57 7.117523 CCTTTTAGATCACAGACAAACAGAGAG 59.882 40.741 0.00 0.00 0.00 3.20
57 58 4.533919 AGATCACAGACAAACAGAGAGG 57.466 45.455 0.00 0.00 0.00 3.69
58 59 4.155709 AGATCACAGACAAACAGAGAGGA 58.844 43.478 0.00 0.00 0.00 3.71
59 60 4.590647 AGATCACAGACAAACAGAGAGGAA 59.409 41.667 0.00 0.00 0.00 3.36
60 61 4.753516 TCACAGACAAACAGAGAGGAAA 57.246 40.909 0.00 0.00 0.00 3.13
61 62 4.697514 TCACAGACAAACAGAGAGGAAAG 58.302 43.478 0.00 0.00 0.00 2.62
62 63 3.249559 CACAGACAAACAGAGAGGAAAGC 59.750 47.826 0.00 0.00 0.00 3.51
63 64 3.135530 ACAGACAAACAGAGAGGAAAGCT 59.864 43.478 0.00 0.00 0.00 3.74
64 65 4.345257 ACAGACAAACAGAGAGGAAAGCTA 59.655 41.667 0.00 0.00 0.00 3.32
65 66 4.928615 CAGACAAACAGAGAGGAAAGCTAG 59.071 45.833 0.00 0.00 0.00 3.42
66 67 3.669536 ACAAACAGAGAGGAAAGCTAGC 58.330 45.455 6.62 6.62 0.00 3.42
67 68 3.326297 ACAAACAGAGAGGAAAGCTAGCT 59.674 43.478 12.68 12.68 0.00 3.32
68 69 3.608316 AACAGAGAGGAAAGCTAGCTG 57.392 47.619 20.16 5.59 0.00 4.24
69 70 1.206849 ACAGAGAGGAAAGCTAGCTGC 59.793 52.381 20.16 13.56 43.29 5.25
70 71 0.829990 AGAGAGGAAAGCTAGCTGCC 59.170 55.000 20.16 21.91 44.23 4.85
71 72 0.179059 GAGAGGAAAGCTAGCTGCCC 60.179 60.000 25.44 23.64 44.23 5.36
72 73 0.911525 AGAGGAAAGCTAGCTGCCCA 60.912 55.000 27.56 0.00 44.23 5.36
73 74 0.035056 GAGGAAAGCTAGCTGCCCAA 60.035 55.000 27.56 0.00 44.23 4.12
74 75 0.405585 AGGAAAGCTAGCTGCCCAAA 59.594 50.000 27.56 0.00 44.23 3.28
75 76 1.203050 AGGAAAGCTAGCTGCCCAAAA 60.203 47.619 27.56 0.00 44.23 2.44
76 77 1.203287 GGAAAGCTAGCTGCCCAAAAG 59.797 52.381 20.16 0.00 44.23 2.27
77 78 1.203287 GAAAGCTAGCTGCCCAAAAGG 59.797 52.381 20.16 0.00 44.23 3.11
78 79 0.405585 AAGCTAGCTGCCCAAAAGGA 59.594 50.000 20.16 0.00 44.23 3.36
79 80 0.405585 AGCTAGCTGCCCAAAAGGAA 59.594 50.000 18.57 0.00 44.23 3.36
80 81 0.813821 GCTAGCTGCCCAAAAGGAAG 59.186 55.000 7.70 0.00 45.78 3.46
81 82 1.614317 GCTAGCTGCCCAAAAGGAAGA 60.614 52.381 7.70 0.00 45.94 2.87
82 83 2.087646 CTAGCTGCCCAAAAGGAAGAC 58.912 52.381 0.00 0.00 45.94 3.01
83 84 0.185901 AGCTGCCCAAAAGGAAGACA 59.814 50.000 0.00 0.00 45.94 3.41
84 85 0.600057 GCTGCCCAAAAGGAAGACAG 59.400 55.000 0.00 0.00 45.94 3.51
85 86 1.819305 GCTGCCCAAAAGGAAGACAGA 60.819 52.381 0.00 0.00 45.94 3.41
86 87 2.586425 CTGCCCAAAAGGAAGACAGAA 58.414 47.619 0.00 0.00 45.94 3.02
87 88 2.958355 CTGCCCAAAAGGAAGACAGAAA 59.042 45.455 0.00 0.00 45.94 2.52
88 89 3.370104 TGCCCAAAAGGAAGACAGAAAA 58.630 40.909 0.00 0.00 38.24 2.29
89 90 3.384467 TGCCCAAAAGGAAGACAGAAAAG 59.616 43.478 0.00 0.00 38.24 2.27
90 91 3.384789 GCCCAAAAGGAAGACAGAAAAGT 59.615 43.478 0.00 0.00 38.24 2.66
91 92 4.737649 GCCCAAAAGGAAGACAGAAAAGTG 60.738 45.833 0.00 0.00 38.24 3.16
92 93 4.644685 CCCAAAAGGAAGACAGAAAAGTGA 59.355 41.667 0.00 0.00 38.24 3.41
93 94 5.302823 CCCAAAAGGAAGACAGAAAAGTGAT 59.697 40.000 0.00 0.00 38.24 3.06
94 95 6.442112 CCAAAAGGAAGACAGAAAAGTGATC 58.558 40.000 0.00 0.00 0.00 2.92
95 96 5.931441 AAAGGAAGACAGAAAAGTGATCG 57.069 39.130 0.00 0.00 0.00 3.69
96 97 4.873746 AGGAAGACAGAAAAGTGATCGA 57.126 40.909 0.00 0.00 0.00 3.59
97 98 5.215252 AGGAAGACAGAAAAGTGATCGAA 57.785 39.130 0.00 0.00 0.00 3.71
98 99 5.611374 AGGAAGACAGAAAAGTGATCGAAA 58.389 37.500 0.00 0.00 0.00 3.46
99 100 5.467063 AGGAAGACAGAAAAGTGATCGAAAC 59.533 40.000 0.00 0.00 0.00 2.78
100 101 5.467063 GGAAGACAGAAAAGTGATCGAAACT 59.533 40.000 0.00 0.00 0.00 2.66
101 102 5.914085 AGACAGAAAAGTGATCGAAACTG 57.086 39.130 5.01 0.00 0.00 3.16
102 103 4.212214 AGACAGAAAAGTGATCGAAACTGC 59.788 41.667 5.01 0.00 0.00 4.40
103 104 4.130118 ACAGAAAAGTGATCGAAACTGCT 58.870 39.130 5.01 1.81 0.00 4.24
104 105 4.212214 ACAGAAAAGTGATCGAAACTGCTC 59.788 41.667 5.01 5.38 0.00 4.26
105 106 3.748568 AGAAAAGTGATCGAAACTGCTCC 59.251 43.478 5.01 0.00 0.00 4.70
106 107 2.839486 AAGTGATCGAAACTGCTCCA 57.161 45.000 5.01 0.00 0.00 3.86
107 108 2.086054 AGTGATCGAAACTGCTCCAC 57.914 50.000 3.51 0.00 0.00 4.02
108 109 1.344438 AGTGATCGAAACTGCTCCACA 59.656 47.619 3.51 0.00 0.00 4.17
109 110 1.461127 GTGATCGAAACTGCTCCACAC 59.539 52.381 0.00 0.00 0.00 3.82
110 111 1.069978 TGATCGAAACTGCTCCACACA 59.930 47.619 0.00 0.00 0.00 3.72
111 112 1.461127 GATCGAAACTGCTCCACACAC 59.539 52.381 0.00 0.00 0.00 3.82
112 113 0.874175 TCGAAACTGCTCCACACACG 60.874 55.000 0.00 0.00 0.00 4.49
113 114 0.874175 CGAAACTGCTCCACACACGA 60.874 55.000 0.00 0.00 0.00 4.35
114 115 1.512926 GAAACTGCTCCACACACGAT 58.487 50.000 0.00 0.00 0.00 3.73
115 116 1.195448 GAAACTGCTCCACACACGATG 59.805 52.381 0.00 0.00 0.00 3.84
116 117 0.106708 AACTGCTCCACACACGATGT 59.893 50.000 0.00 0.00 44.81 3.06
117 118 0.106708 ACTGCTCCACACACGATGTT 59.893 50.000 0.00 0.00 40.64 2.71
118 119 0.792640 CTGCTCCACACACGATGTTC 59.207 55.000 0.00 0.00 40.64 3.18
119 120 0.392706 TGCTCCACACACGATGTTCT 59.607 50.000 0.00 0.00 40.64 3.01
120 121 1.071605 GCTCCACACACGATGTTCTC 58.928 55.000 0.00 0.00 40.64 2.87
121 122 1.337260 GCTCCACACACGATGTTCTCT 60.337 52.381 0.00 0.00 40.64 3.10
122 123 2.332104 CTCCACACACGATGTTCTCTG 58.668 52.381 0.00 0.00 40.64 3.35
123 124 1.000843 TCCACACACGATGTTCTCTGG 59.999 52.381 0.00 0.00 40.64 3.86
124 125 1.432514 CACACACGATGTTCTCTGGG 58.567 55.000 0.00 0.00 40.64 4.45
125 126 0.320771 ACACACGATGTTCTCTGGGC 60.321 55.000 0.00 0.00 38.98 5.36
126 127 1.079819 ACACGATGTTCTCTGGGCG 60.080 57.895 0.00 0.00 0.00 6.13
127 128 1.215382 CACGATGTTCTCTGGGCGA 59.785 57.895 0.00 0.00 0.00 5.54
128 129 0.179100 CACGATGTTCTCTGGGCGAT 60.179 55.000 0.00 0.00 0.00 4.58
129 130 0.103208 ACGATGTTCTCTGGGCGATC 59.897 55.000 0.00 0.00 0.00 3.69
130 131 0.387202 CGATGTTCTCTGGGCGATCT 59.613 55.000 0.00 0.00 0.00 2.75
131 132 1.863267 GATGTTCTCTGGGCGATCTG 58.137 55.000 0.00 0.00 0.00 2.90
132 133 1.137872 GATGTTCTCTGGGCGATCTGT 59.862 52.381 0.00 0.00 0.00 3.41
133 134 0.247460 TGTTCTCTGGGCGATCTGTG 59.753 55.000 0.00 0.00 0.00 3.66
134 135 1.086634 GTTCTCTGGGCGATCTGTGC 61.087 60.000 0.00 0.00 0.00 4.57
135 136 1.543944 TTCTCTGGGCGATCTGTGCA 61.544 55.000 0.00 0.00 0.00 4.57
136 137 1.812922 CTCTGGGCGATCTGTGCAC 60.813 63.158 10.75 10.75 35.91 4.57
137 138 3.190849 CTGGGCGATCTGTGCACG 61.191 66.667 13.13 7.36 39.07 5.34
138 139 3.647649 CTGGGCGATCTGTGCACGA 62.648 63.158 13.13 12.78 39.07 4.35
139 140 3.188786 GGGCGATCTGTGCACGAC 61.189 66.667 13.13 0.84 0.00 4.34
140 141 2.432456 GGCGATCTGTGCACGACA 60.432 61.111 13.13 0.00 35.00 4.35
141 142 2.027073 GGCGATCTGTGCACGACAA 61.027 57.895 13.13 0.00 35.00 3.18
142 143 1.565156 GGCGATCTGTGCACGACAAA 61.565 55.000 13.13 0.00 35.00 2.83
143 144 0.179240 GCGATCTGTGCACGACAAAG 60.179 55.000 13.13 3.37 34.56 2.77
144 145 1.139989 CGATCTGTGCACGACAAAGT 58.860 50.000 13.13 0.00 34.88 2.66
145 146 2.324860 CGATCTGTGCACGACAAAGTA 58.675 47.619 13.13 0.00 34.88 2.24
146 147 2.729360 CGATCTGTGCACGACAAAGTAA 59.271 45.455 13.13 0.00 34.88 2.24
147 148 3.367932 CGATCTGTGCACGACAAAGTAAT 59.632 43.478 13.13 0.00 34.88 1.89
148 149 4.490959 CGATCTGTGCACGACAAAGTAATC 60.491 45.833 13.13 3.05 34.88 1.75
149 150 3.064207 TCTGTGCACGACAAAGTAATCC 58.936 45.455 13.13 0.00 34.88 3.01
150 151 2.805671 CTGTGCACGACAAAGTAATCCA 59.194 45.455 13.13 0.00 32.80 3.41
151 152 2.805671 TGTGCACGACAAAGTAATCCAG 59.194 45.455 13.13 0.00 0.00 3.86
152 153 1.804151 TGCACGACAAAGTAATCCAGC 59.196 47.619 0.00 0.00 0.00 4.85
153 154 1.201921 GCACGACAAAGTAATCCAGCG 60.202 52.381 0.00 0.00 0.00 5.18
154 155 1.393539 CACGACAAAGTAATCCAGCGG 59.606 52.381 0.00 0.00 0.00 5.52
155 156 0.373716 CGACAAAGTAATCCAGCGGC 59.626 55.000 0.00 0.00 0.00 6.53
156 157 0.733150 GACAAAGTAATCCAGCGGCC 59.267 55.000 0.00 0.00 0.00 6.13
157 158 1.024579 ACAAAGTAATCCAGCGGCCG 61.025 55.000 24.05 24.05 0.00 6.13
158 159 1.024579 CAAAGTAATCCAGCGGCCGT 61.025 55.000 28.70 11.01 0.00 5.68
159 160 0.322187 AAAGTAATCCAGCGGCCGTT 60.322 50.000 28.70 20.13 0.00 4.44
160 161 1.024579 AAGTAATCCAGCGGCCGTTG 61.025 55.000 32.41 32.41 0.00 4.10
161 162 2.822255 TAATCCAGCGGCCGTTGC 60.822 61.111 33.71 14.95 0.00 4.17
162 163 3.323758 TAATCCAGCGGCCGTTGCT 62.324 57.895 33.71 22.09 45.31 3.91
163 164 2.813226 TAATCCAGCGGCCGTTGCTT 62.813 55.000 33.71 27.98 41.72 3.91
172 173 3.342627 CCGTTGCTTCGTTGCGGA 61.343 61.111 0.00 0.00 44.57 5.54
173 174 2.170985 CGTTGCTTCGTTGCGGAG 59.829 61.111 0.00 0.00 35.26 4.63
186 187 4.327885 CGGAGCAGATTCCTACGC 57.672 61.111 0.00 0.00 34.96 4.42
187 188 1.736586 CGGAGCAGATTCCTACGCT 59.263 57.895 0.00 0.00 37.44 5.07
188 189 0.596083 CGGAGCAGATTCCTACGCTG 60.596 60.000 0.00 0.00 34.12 5.18
189 190 0.249657 GGAGCAGATTCCTACGCTGG 60.250 60.000 0.00 0.00 34.12 4.85
190 191 0.747255 GAGCAGATTCCTACGCTGGA 59.253 55.000 0.00 0.00 34.12 3.86
191 192 1.342819 GAGCAGATTCCTACGCTGGAT 59.657 52.381 0.00 0.00 35.83 3.41
192 193 1.765314 AGCAGATTCCTACGCTGGATT 59.235 47.619 0.00 0.00 35.83 3.01
193 194 2.171448 AGCAGATTCCTACGCTGGATTT 59.829 45.455 0.00 0.00 35.83 2.17
194 195 3.388024 AGCAGATTCCTACGCTGGATTTA 59.612 43.478 0.00 0.00 35.83 1.40
195 196 4.127171 GCAGATTCCTACGCTGGATTTAA 58.873 43.478 0.00 0.00 35.83 1.52
196 197 4.024809 GCAGATTCCTACGCTGGATTTAAC 60.025 45.833 0.00 0.00 35.83 2.01
197 198 4.511826 CAGATTCCTACGCTGGATTTAACC 59.488 45.833 0.00 0.00 35.83 2.85
198 199 2.589798 TCCTACGCTGGATTTAACCG 57.410 50.000 0.00 0.00 0.00 4.44
199 200 1.826720 TCCTACGCTGGATTTAACCGT 59.173 47.619 0.00 0.00 36.07 4.83
200 201 2.159198 TCCTACGCTGGATTTAACCGTC 60.159 50.000 0.00 0.00 33.79 4.79
201 202 1.850441 CTACGCTGGATTTAACCGTCG 59.150 52.381 0.00 0.00 33.79 5.12
202 203 0.037975 ACGCTGGATTTAACCGTCGT 60.038 50.000 0.00 0.00 36.35 4.34
203 204 0.643820 CGCTGGATTTAACCGTCGTC 59.356 55.000 0.00 0.00 0.00 4.20
204 205 1.734707 CGCTGGATTTAACCGTCGTCT 60.735 52.381 0.00 0.00 0.00 4.18
205 206 1.659098 GCTGGATTTAACCGTCGTCTG 59.341 52.381 0.00 0.00 0.00 3.51
206 207 1.659098 CTGGATTTAACCGTCGTCTGC 59.341 52.381 0.00 0.00 0.00 4.26
207 208 1.001068 TGGATTTAACCGTCGTCTGCA 59.999 47.619 0.00 0.00 0.00 4.41
208 209 2.070783 GGATTTAACCGTCGTCTGCAA 58.929 47.619 0.00 0.00 0.00 4.08
209 210 2.481185 GGATTTAACCGTCGTCTGCAAA 59.519 45.455 0.00 0.00 0.00 3.68
210 211 3.126343 GGATTTAACCGTCGTCTGCAAAT 59.874 43.478 0.00 0.00 0.00 2.32
211 212 3.799137 TTTAACCGTCGTCTGCAAATC 57.201 42.857 0.00 0.00 0.00 2.17
212 213 1.342555 TAACCGTCGTCTGCAAATCG 58.657 50.000 0.00 0.00 0.00 3.34
213 214 0.599204 AACCGTCGTCTGCAAATCGT 60.599 50.000 0.00 0.00 0.00 3.73
214 215 1.007336 ACCGTCGTCTGCAAATCGTC 61.007 55.000 0.00 0.00 0.00 4.20
215 216 0.732880 CCGTCGTCTGCAAATCGTCT 60.733 55.000 0.00 0.00 0.00 4.18
216 217 0.363512 CGTCGTCTGCAAATCGTCTG 59.636 55.000 0.00 0.00 0.00 3.51
217 218 1.698165 GTCGTCTGCAAATCGTCTGA 58.302 50.000 0.00 0.00 0.00 3.27
218 219 2.263077 GTCGTCTGCAAATCGTCTGAT 58.737 47.619 0.00 0.00 35.98 2.90
219 220 3.435566 GTCGTCTGCAAATCGTCTGATA 58.564 45.455 0.00 0.00 33.40 2.15
220 221 4.045104 GTCGTCTGCAAATCGTCTGATAT 58.955 43.478 0.00 0.00 33.40 1.63
221 222 4.504461 GTCGTCTGCAAATCGTCTGATATT 59.496 41.667 0.00 0.00 33.40 1.28
222 223 4.504097 TCGTCTGCAAATCGTCTGATATTG 59.496 41.667 0.00 0.00 33.40 1.90
223 224 4.268644 CGTCTGCAAATCGTCTGATATTGT 59.731 41.667 0.00 0.00 33.40 2.71
224 225 5.555256 CGTCTGCAAATCGTCTGATATTGTC 60.555 44.000 0.00 0.00 33.40 3.18
225 226 4.504097 TCTGCAAATCGTCTGATATTGTCG 59.496 41.667 0.00 0.00 33.40 4.35
226 227 4.180817 TGCAAATCGTCTGATATTGTCGT 58.819 39.130 0.00 0.00 33.40 4.34
227 228 4.267690 TGCAAATCGTCTGATATTGTCGTC 59.732 41.667 0.00 0.00 33.40 4.20
228 229 4.318121 GCAAATCGTCTGATATTGTCGTCC 60.318 45.833 0.00 0.00 33.40 4.79
229 230 2.750301 TCGTCTGATATTGTCGTCCG 57.250 50.000 0.00 0.00 0.00 4.79
230 231 1.121240 CGTCTGATATTGTCGTCCGC 58.879 55.000 0.00 0.00 0.00 5.54
231 232 1.533129 CGTCTGATATTGTCGTCCGCA 60.533 52.381 0.00 0.00 0.00 5.69
232 233 2.743938 GTCTGATATTGTCGTCCGCAT 58.256 47.619 0.00 0.00 0.00 4.73
233 234 3.608474 CGTCTGATATTGTCGTCCGCATA 60.608 47.826 0.00 0.00 0.00 3.14
234 235 3.914966 GTCTGATATTGTCGTCCGCATAG 59.085 47.826 0.00 0.00 0.00 2.23
235 236 2.663602 CTGATATTGTCGTCCGCATAGC 59.336 50.000 0.00 0.00 0.00 2.97
236 237 2.035321 TGATATTGTCGTCCGCATAGCA 59.965 45.455 0.00 0.00 0.00 3.49
237 238 1.847818 TATTGTCGTCCGCATAGCAC 58.152 50.000 0.00 0.00 0.00 4.40
238 239 0.175760 ATTGTCGTCCGCATAGCACT 59.824 50.000 0.00 0.00 0.00 4.40
239 240 0.735978 TTGTCGTCCGCATAGCACTG 60.736 55.000 0.00 0.00 0.00 3.66
240 241 2.202743 TCGTCCGCATAGCACTGC 60.203 61.111 0.00 0.00 38.81 4.40
241 242 2.202797 CGTCCGCATAGCACTGCT 60.203 61.111 8.95 8.95 43.41 4.24
242 243 2.233654 CGTCCGCATAGCACTGCTC 61.234 63.158 6.86 0.00 40.44 4.26
243 244 1.153568 GTCCGCATAGCACTGCTCA 60.154 57.895 6.86 0.00 40.44 4.26
244 245 0.740868 GTCCGCATAGCACTGCTCAA 60.741 55.000 6.86 0.00 40.44 3.02
245 246 0.036483 TCCGCATAGCACTGCTCAAA 60.036 50.000 6.86 0.00 40.44 2.69
246 247 0.804364 CCGCATAGCACTGCTCAAAA 59.196 50.000 6.86 0.00 40.44 2.44
247 248 1.202110 CCGCATAGCACTGCTCAAAAG 60.202 52.381 6.86 0.00 40.44 2.27
248 249 1.466167 CGCATAGCACTGCTCAAAAGT 59.534 47.619 6.86 0.00 40.44 2.66
249 250 2.726989 CGCATAGCACTGCTCAAAAGTG 60.727 50.000 6.86 0.00 46.39 3.16
250 251 2.485426 GCATAGCACTGCTCAAAAGTGA 59.515 45.455 6.86 0.00 46.55 3.41
251 252 3.128242 GCATAGCACTGCTCAAAAGTGAT 59.872 43.478 6.86 3.74 46.55 3.06
252 253 4.730035 GCATAGCACTGCTCAAAAGTGATC 60.730 45.833 6.86 0.00 46.55 2.92
253 254 2.157738 AGCACTGCTCAAAAGTGATCC 58.842 47.619 7.72 0.00 46.55 3.36
254 255 1.200948 GCACTGCTCAAAAGTGATCCC 59.799 52.381 7.72 0.00 46.55 3.85
255 256 2.787994 CACTGCTCAAAAGTGATCCCT 58.212 47.619 0.00 0.00 46.55 4.20
256 257 2.486982 CACTGCTCAAAAGTGATCCCTG 59.513 50.000 0.00 0.00 46.55 4.45
257 258 2.373169 ACTGCTCAAAAGTGATCCCTGA 59.627 45.455 0.00 0.00 31.85 3.86
258 259 3.181440 ACTGCTCAAAAGTGATCCCTGAA 60.181 43.478 0.00 0.00 31.85 3.02
259 260 4.015084 CTGCTCAAAAGTGATCCCTGAAT 58.985 43.478 0.00 0.00 31.85 2.57
260 261 4.410099 TGCTCAAAAGTGATCCCTGAATT 58.590 39.130 0.00 0.00 31.85 2.17
261 262 4.460382 TGCTCAAAAGTGATCCCTGAATTC 59.540 41.667 0.00 0.00 31.85 2.17
264 265 6.350780 GCTCAAAAGTGATCCCTGAATTCATT 60.351 38.462 8.96 0.00 31.85 2.57
275 276 9.702494 GATCCCTGAATTCATTTTATTTCCATC 57.298 33.333 8.96 0.00 0.00 3.51
277 278 8.698210 TCCCTGAATTCATTTTATTTCCATCTG 58.302 33.333 8.96 0.00 0.00 2.90
314 315 6.529463 TTTCGAGTTCCTTTTACCGTTTAG 57.471 37.500 0.00 0.00 0.00 1.85
316 317 6.029346 TCGAGTTCCTTTTACCGTTTAGAT 57.971 37.500 0.00 0.00 0.00 1.98
317 318 6.095377 TCGAGTTCCTTTTACCGTTTAGATC 58.905 40.000 0.00 0.00 0.00 2.75
319 320 6.183360 CGAGTTCCTTTTACCGTTTAGATCAC 60.183 42.308 0.00 0.00 0.00 3.06
320 321 6.527423 AGTTCCTTTTACCGTTTAGATCACA 58.473 36.000 0.00 0.00 0.00 3.58
321 322 6.649557 AGTTCCTTTTACCGTTTAGATCACAG 59.350 38.462 0.00 0.00 0.00 3.66
327 331 7.972832 TTTACCGTTTAGATCACAGACAAAT 57.027 32.000 0.00 0.00 0.00 2.32
341 345 2.010497 GACAAATCGGAGAGGAAAGCC 58.990 52.381 0.00 0.00 43.63 4.35
345 349 1.977293 ATCGGAGAGGAAAGCCAGCC 61.977 60.000 0.00 0.00 43.63 4.85
358 362 2.639327 CCAGCCGCCCAAAAGGAAG 61.639 63.158 0.00 0.00 38.24 3.46
359 363 1.603455 CAGCCGCCCAAAAGGAAGA 60.603 57.895 0.00 0.00 38.24 2.87
363 367 0.250727 CCGCCCAAAAGGAAGACAGA 60.251 55.000 0.00 0.00 38.24 3.41
377 388 2.704572 AGACAGAAAAAGCGATCCCTG 58.295 47.619 0.00 0.00 0.00 4.45
379 390 3.074412 GACAGAAAAAGCGATCCCTGAA 58.926 45.455 0.00 0.00 0.00 3.02
380 391 3.690460 ACAGAAAAAGCGATCCCTGAAT 58.310 40.909 0.00 0.00 0.00 2.57
381 392 4.082125 ACAGAAAAAGCGATCCCTGAATT 58.918 39.130 0.00 0.00 0.00 2.17
382 393 4.156739 ACAGAAAAAGCGATCCCTGAATTC 59.843 41.667 0.00 0.00 0.00 2.17
397 408 5.455899 CCCTGAATTCATTCTAGAGGGGAAG 60.456 48.000 16.46 0.00 40.94 3.46
421 432 2.874701 CCTAGTTTCTGGCCATGAATCG 59.125 50.000 5.51 0.00 0.00 3.34
455 466 2.540931 CACTTTGGCATTGCACAGAAAC 59.459 45.455 11.39 0.00 0.00 2.78
460 471 2.429971 TGGCATTGCACAGAAACAGAAA 59.570 40.909 11.39 0.00 0.00 2.52
462 473 4.280425 TGGCATTGCACAGAAACAGAAATA 59.720 37.500 11.39 0.00 0.00 1.40
463 474 4.622740 GGCATTGCACAGAAACAGAAATAC 59.377 41.667 11.39 0.00 0.00 1.89
473 535 8.798153 CACAGAAACAGAAATACTTTCACAAAC 58.202 33.333 2.76 0.00 42.10 2.93
478 540 9.573133 AAACAGAAATACTTTCACAAACTGAAG 57.427 29.630 0.00 0.00 40.12 3.02
479 541 8.281212 ACAGAAATACTTTCACAAACTGAAGT 57.719 30.769 0.00 0.00 40.12 3.01
577 1028 1.940613 GGACAATAACTGGACGGATGC 59.059 52.381 0.00 0.00 0.00 3.91
578 1029 2.627945 GACAATAACTGGACGGATGCA 58.372 47.619 0.00 0.00 0.00 3.96
592 1043 5.451798 GGACGGATGCACATAAATTTCCAAT 60.452 40.000 0.00 0.00 0.00 3.16
619 1078 5.365605 CAGTTACTCTCTCCCTCTCTCTCTA 59.634 48.000 0.00 0.00 0.00 2.43
621 1080 7.234782 CAGTTACTCTCTCCCTCTCTCTCTATA 59.765 44.444 0.00 0.00 0.00 1.31
623 1082 9.263446 GTTACTCTCTCCCTCTCTCTCTATATA 57.737 40.741 0.00 0.00 0.00 0.86
641 1100 7.980062 TCTATATATCTAGAAGCTGCTGTTCG 58.020 38.462 3.74 0.00 0.00 3.95
673 1421 3.897141 TTTTCCACCAAGAAAACCCAC 57.103 42.857 0.00 0.00 40.04 4.61
680 1428 2.703536 ACCAAGAAAACCCACCCAATTC 59.296 45.455 0.00 0.00 0.00 2.17
712 1460 2.037136 CCGCAACAGGAGGAAGCAG 61.037 63.158 0.00 0.00 39.08 4.24
717 1465 0.980423 AACAGGAGGAAGCAGGTCTC 59.020 55.000 0.00 0.00 0.00 3.36
772 1523 7.331687 AGCTAACATTAACATTGATTTGTTGGC 59.668 33.333 15.80 15.80 45.84 4.52
828 1598 3.246112 CCCACCAACGTCCTCCCA 61.246 66.667 0.00 0.00 0.00 4.37
900 1681 4.715130 CTCCCCACCCGACCTCCA 62.715 72.222 0.00 0.00 0.00 3.86
939 1720 0.526524 CTCCAAGCGTAGGCGAAGAG 60.527 60.000 1.05 5.62 46.35 2.85
940 1721 1.519455 CCAAGCGTAGGCGAAGAGG 60.519 63.158 1.05 0.00 46.35 3.69
953 1764 2.615869 CGAAGAGGGAGAGAGCAAAAG 58.384 52.381 0.00 0.00 0.00 2.27
1046 1857 2.882137 AGTTCCACAACAAATGGTACGG 59.118 45.455 0.00 0.00 41.15 4.02
1063 1874 2.368878 GCCCTGGATCCCTCCCTT 60.369 66.667 9.90 0.00 41.29 3.95
1073 1884 2.364961 CCTCCCTTCTCCCCGTCT 59.635 66.667 0.00 0.00 0.00 4.18
1095 1906 0.171903 CCATCCGGCTCTTGCTTTTG 59.828 55.000 0.00 0.00 39.59 2.44
1141 1952 1.633852 CTCTTGCTTCTGCTGGTCGC 61.634 60.000 0.00 0.00 40.48 5.19
1176 1987 0.967380 AGCGGCTGAGGATTTTTGGG 60.967 55.000 0.00 0.00 0.00 4.12
1185 1996 5.667466 CTGAGGATTTTTGGGGATGATTTG 58.333 41.667 0.00 0.00 0.00 2.32
1188 1999 4.845796 AGGATTTTTGGGGATGATTTGTGT 59.154 37.500 0.00 0.00 0.00 3.72
1190 2001 5.412286 GGATTTTTGGGGATGATTTGTGTTG 59.588 40.000 0.00 0.00 0.00 3.33
1191 2002 3.399440 TTTGGGGATGATTTGTGTTGC 57.601 42.857 0.00 0.00 0.00 4.17
1195 2006 1.468054 GGGATGATTTGTGTTGCTCGC 60.468 52.381 0.00 0.00 0.00 5.03
1238 2049 3.652274 CCGGCATTTGTTTGATTTCTGT 58.348 40.909 0.00 0.00 0.00 3.41
1252 2063 2.796483 TTCTGTATTGCTGCGGCCGT 62.796 55.000 28.70 8.14 37.74 5.68
1253 2064 2.813179 CTGTATTGCTGCGGCCGTC 61.813 63.158 28.70 19.46 37.74 4.79
1264 2075 1.445410 CGGCCGTCGTTCATCAGAA 60.445 57.895 19.50 0.00 0.00 3.02
1272 2083 2.100197 TCGTTCATCAGAAGTCCGGAT 58.900 47.619 7.81 0.00 33.63 4.18
1273 2084 2.496070 TCGTTCATCAGAAGTCCGGATT 59.504 45.455 7.81 0.00 33.63 3.01
1274 2085 3.056107 TCGTTCATCAGAAGTCCGGATTT 60.056 43.478 12.63 12.63 33.63 2.17
1275 2086 3.684788 CGTTCATCAGAAGTCCGGATTTT 59.315 43.478 14.03 8.75 33.63 1.82
1347 2160 0.739112 CTCTGTCTCGCCTGCCTTTC 60.739 60.000 0.00 0.00 0.00 2.62
1352 2165 3.689002 CTCGCCTGCCTTTCTCCCC 62.689 68.421 0.00 0.00 0.00 4.81
1404 2220 0.506932 CGTGATTCGTGTCGCTGTTT 59.493 50.000 2.87 0.00 34.52 2.83
1407 2223 2.221055 GTGATTCGTGTCGCTGTTTCTT 59.779 45.455 0.00 0.00 0.00 2.52
1409 2225 0.934496 TTCGTGTCGCTGTTTCTTGG 59.066 50.000 0.00 0.00 0.00 3.61
1437 2253 1.813513 GTCCAGCTTTGCTTGCTCTA 58.186 50.000 0.00 0.00 36.40 2.43
1445 2261 3.129988 GCTTTGCTTGCTCTATGATGGTT 59.870 43.478 0.00 0.00 0.00 3.67
1446 2262 4.381292 GCTTTGCTTGCTCTATGATGGTTT 60.381 41.667 0.00 0.00 0.00 3.27
1463 2279 4.294347 TGGTTTTGGGAATCTGTCCTTTT 58.706 39.130 0.00 0.00 46.92 2.27
1476 2292 1.893137 GTCCTTTTGGGGGATTGTGTC 59.107 52.381 0.00 0.00 40.87 3.67
1487 2303 1.126846 GGATTGTGTCGCTTGTTCGAG 59.873 52.381 0.00 0.00 39.34 4.04
1488 2304 0.512952 ATTGTGTCGCTTGTTCGAGC 59.487 50.000 2.22 2.22 39.34 5.03
1536 2369 2.823984 CATTTTGTTCAGGCTGTTGCA 58.176 42.857 15.27 9.13 41.91 4.08
1572 2405 3.282021 TCTGATTGCTGGATTTGCTACC 58.718 45.455 0.00 0.00 0.00 3.18
1653 2486 0.034670 AGAAGAAGCAGGCCATGGTC 60.035 55.000 8.79 8.79 39.18 4.02
1668 2501 3.498481 CCATGGTCAAGTTCCTGAGGAAA 60.498 47.826 16.79 0.00 43.86 3.13
1756 2589 1.160329 AACTCACCGACTTGCACTGC 61.160 55.000 0.00 0.00 0.00 4.40
1785 2618 8.705594 ACTAATGATTATTACCAGCAGTGTACT 58.294 33.333 0.00 0.00 0.00 2.73
1842 2675 4.892433 TCTTTTGTAAATGTTGGGCATGG 58.108 39.130 0.00 0.00 37.96 3.66
1845 2678 3.113191 TGTAAATGTTGGGCATGGGAT 57.887 42.857 0.00 0.00 37.96 3.85
1846 2679 2.765135 TGTAAATGTTGGGCATGGGATG 59.235 45.455 0.00 0.00 37.96 3.51
1850 2683 0.701147 TGTTGGGCATGGGATGTGTA 59.299 50.000 0.00 0.00 0.00 2.90
1856 2689 6.216456 TGTTGGGCATGGGATGTGTATATATA 59.784 38.462 0.00 0.00 0.00 0.86
1882 2715 2.310052 GGATATTTCCTCCTGGGATGGG 59.690 54.545 0.00 0.00 44.66 4.00
1998 2831 2.906389 ACCTGCAGAAACAGAGGTATCA 59.094 45.455 17.39 0.00 40.25 2.15
2070 2903 6.658849 TGCAATCCCTAGTAATTAAGCTTGA 58.341 36.000 9.86 0.00 0.00 3.02
2121 2954 2.110835 TGCACCGCAGATGTGTGT 59.889 55.556 2.44 0.00 33.32 3.72
2122 2955 1.525765 TGCACCGCAGATGTGTGTT 60.526 52.632 2.44 0.00 33.32 3.32
2219 3052 4.856115 GCAATAGCTTGACTCTCTGAAC 57.144 45.455 0.00 0.00 37.91 3.18
2296 3130 6.017400 ACACAATTCCTGTCAATTTAGCTG 57.983 37.500 0.00 0.00 35.47 4.24
2303 3137 5.809001 TCCTGTCAATTTAGCTGATCAACT 58.191 37.500 3.72 3.72 0.00 3.16
2394 3228 7.851508 TCGAAACTGCAAATAAGCATATACTC 58.148 34.615 0.00 0.00 44.68 2.59
2395 3229 7.042051 TCGAAACTGCAAATAAGCATATACTCC 60.042 37.037 0.00 0.00 44.68 3.85
2398 3232 6.234177 ACTGCAAATAAGCATATACTCCCTC 58.766 40.000 0.00 0.00 44.68 4.30
2399 3233 5.560724 TGCAAATAAGCATATACTCCCTCC 58.439 41.667 0.00 0.00 40.11 4.30
2400 3234 4.631813 GCAAATAAGCATATACTCCCTCCG 59.368 45.833 0.00 0.00 0.00 4.63
2401 3235 5.794894 CAAATAAGCATATACTCCCTCCGT 58.205 41.667 0.00 0.00 0.00 4.69
2402 3236 5.662674 AATAAGCATATACTCCCTCCGTC 57.337 43.478 0.00 0.00 0.00 4.79
2403 3237 2.982339 AGCATATACTCCCTCCGTCT 57.018 50.000 0.00 0.00 0.00 4.18
2404 3238 2.520069 AGCATATACTCCCTCCGTCTG 58.480 52.381 0.00 0.00 0.00 3.51
2405 3239 2.108425 AGCATATACTCCCTCCGTCTGA 59.892 50.000 0.00 0.00 0.00 3.27
2406 3240 2.891580 GCATATACTCCCTCCGTCTGAA 59.108 50.000 0.00 0.00 0.00 3.02
2407 3241 3.321111 GCATATACTCCCTCCGTCTGAAA 59.679 47.826 0.00 0.00 0.00 2.69
2408 3242 4.202223 GCATATACTCCCTCCGTCTGAAAA 60.202 45.833 0.00 0.00 0.00 2.29
2409 3243 5.684030 GCATATACTCCCTCCGTCTGAAAAA 60.684 44.000 0.00 0.00 0.00 1.94
2410 3244 2.841442 ACTCCCTCCGTCTGAAAAAG 57.159 50.000 0.00 0.00 0.00 2.27
2411 3245 1.270893 ACTCCCTCCGTCTGAAAAAGC 60.271 52.381 0.00 0.00 0.00 3.51
2412 3246 1.002544 CTCCCTCCGTCTGAAAAAGCT 59.997 52.381 0.00 0.00 0.00 3.74
2413 3247 1.420138 TCCCTCCGTCTGAAAAAGCTT 59.580 47.619 0.00 0.00 0.00 3.74
2414 3248 1.807142 CCCTCCGTCTGAAAAAGCTTC 59.193 52.381 0.00 0.00 0.00 3.86
2415 3249 1.807142 CCTCCGTCTGAAAAAGCTTCC 59.193 52.381 0.00 0.00 0.00 3.46
2416 3250 1.807142 CTCCGTCTGAAAAAGCTTCCC 59.193 52.381 0.00 0.00 0.00 3.97
2417 3251 1.420138 TCCGTCTGAAAAAGCTTCCCT 59.580 47.619 0.00 0.00 0.00 4.20
2418 3252 2.158667 TCCGTCTGAAAAAGCTTCCCTT 60.159 45.455 0.00 0.00 34.51 3.95
2419 3253 3.071892 TCCGTCTGAAAAAGCTTCCCTTA 59.928 43.478 0.00 0.00 32.20 2.69
2420 3254 3.818773 CCGTCTGAAAAAGCTTCCCTTAA 59.181 43.478 0.00 0.00 32.20 1.85
2421 3255 4.459337 CCGTCTGAAAAAGCTTCCCTTAAT 59.541 41.667 0.00 0.00 32.20 1.40
2422 3256 5.393962 CGTCTGAAAAAGCTTCCCTTAATG 58.606 41.667 0.00 0.00 32.20 1.90
2423 3257 5.619981 CGTCTGAAAAAGCTTCCCTTAATGG 60.620 44.000 0.00 0.00 32.20 3.16
2424 3258 5.476945 GTCTGAAAAAGCTTCCCTTAATGGA 59.523 40.000 0.00 0.00 38.35 3.41
2425 3259 6.153510 GTCTGAAAAAGCTTCCCTTAATGGAT 59.846 38.462 0.00 0.00 38.35 3.41
2426 3260 6.153340 TCTGAAAAAGCTTCCCTTAATGGATG 59.847 38.462 0.00 4.52 38.35 3.51
2427 3261 5.779771 TGAAAAAGCTTCCCTTAATGGATGT 59.220 36.000 0.00 0.62 38.35 3.06
2428 3262 6.951198 TGAAAAAGCTTCCCTTAATGGATGTA 59.049 34.615 0.00 0.00 38.35 2.29
2429 3263 7.619302 TGAAAAAGCTTCCCTTAATGGATGTAT 59.381 33.333 0.00 2.30 38.35 2.29
2430 3264 7.588497 AAAAGCTTCCCTTAATGGATGTATC 57.412 36.000 0.00 0.00 38.35 2.24
2431 3265 6.521527 AAGCTTCCCTTAATGGATGTATCT 57.478 37.500 12.32 1.83 38.35 1.98
2432 3266 7.633018 AAGCTTCCCTTAATGGATGTATCTA 57.367 36.000 12.32 0.00 38.35 1.98
2433 3267 7.251321 AGCTTCCCTTAATGGATGTATCTAG 57.749 40.000 12.32 2.53 38.35 2.43
2434 3268 5.877564 GCTTCCCTTAATGGATGTATCTAGC 59.122 44.000 12.32 7.70 38.35 3.42
2435 3269 6.520742 GCTTCCCTTAATGGATGTATCTAGCA 60.521 42.308 12.32 0.00 38.35 3.49
2436 3270 7.574021 TTCCCTTAATGGATGTATCTAGCAT 57.426 36.000 0.00 0.00 38.35 3.79
2437 3271 7.187824 TCCCTTAATGGATGTATCTAGCATC 57.812 40.000 0.00 1.37 41.30 3.91
2438 3272 6.730507 TCCCTTAATGGATGTATCTAGCATCA 59.269 38.462 9.99 0.00 43.17 3.07
2439 3273 7.237471 TCCCTTAATGGATGTATCTAGCATCAA 59.763 37.037 9.99 0.98 43.17 2.57
2440 3274 7.551974 CCCTTAATGGATGTATCTAGCATCAAG 59.448 40.741 9.99 5.80 43.17 3.02
2441 3275 8.099537 CCTTAATGGATGTATCTAGCATCAAGT 58.900 37.037 9.99 2.48 43.17 3.16
2442 3276 9.499479 CTTAATGGATGTATCTAGCATCAAGTT 57.501 33.333 9.99 5.22 43.17 2.66
2443 3277 9.851686 TTAATGGATGTATCTAGCATCAAGTTT 57.148 29.630 9.99 2.66 43.17 2.66
2444 3278 8.757982 AATGGATGTATCTAGCATCAAGTTTT 57.242 30.769 9.99 0.00 43.17 2.43
2445 3279 8.757982 ATGGATGTATCTAGCATCAAGTTTTT 57.242 30.769 9.99 0.00 43.17 1.94
2460 3294 2.444281 TTTTTCGGACGGAGGGAGT 58.556 52.632 0.00 0.00 0.00 3.85
2461 3295 1.631405 TTTTTCGGACGGAGGGAGTA 58.369 50.000 0.00 0.00 0.00 2.59
2462 3296 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
2470 3304 2.358582 GACGGAGGGAGTACTAGCTTTC 59.641 54.545 0.00 0.00 0.00 2.62
2475 3309 2.498078 AGGGAGTACTAGCTTTCTGCAC 59.502 50.000 0.00 0.00 45.94 4.57
2522 3363 8.974292 ATATACCCAACTTCCATACTAGATGT 57.026 34.615 0.00 0.00 0.00 3.06
2546 3389 6.853872 GTGTTGTTCGTGTTTTGCTATATCAA 59.146 34.615 0.00 0.00 0.00 2.57
2576 3419 6.018669 GCATATGCACCTCTTACAGAAGTTAC 60.019 42.308 22.84 0.00 41.59 2.50
2620 3463 6.092122 TCAGTTATGATTACGCAACTTCCTTG 59.908 38.462 0.00 0.00 0.00 3.61
2637 3480 9.654663 AACTTCCTTGTATAGTTGATCACTAAC 57.345 33.333 0.00 0.00 41.56 2.34
2681 3524 1.755783 GCCCTCATGAAGCCTTGGG 60.756 63.158 10.45 10.45 37.76 4.12
3145 3990 2.951229 AGAAGGGTTCATTCAACGGT 57.049 45.000 0.00 0.00 35.59 4.83
3232 4077 8.325046 AGGAAATCTAAATCTATACCTGATGGC 58.675 37.037 0.00 0.00 36.63 4.40
3247 4092 0.611618 ATGGCCGTGAATGGAAGCAA 60.612 50.000 0.00 0.00 0.00 3.91
3313 4158 3.632145 ACATTGGTCAAGTTGGTGAGAAC 59.368 43.478 2.34 0.00 0.00 3.01
3421 4266 4.340950 GGTCATCAAAAGGAGGTCAACAAA 59.659 41.667 0.00 0.00 0.00 2.83
3740 4585 2.289819 ACCTTGAATGGCAATGGCAAAG 60.290 45.455 14.81 12.72 42.43 2.77
3766 4611 6.318900 CAGTAAACAAGGTTCCTCCATATTCC 59.681 42.308 0.00 0.00 39.02 3.01
3817 4662 6.709846 AGTCTGCTGAAGAAGATAATAATGGC 59.290 38.462 0.00 0.00 36.40 4.40
3823 4668 8.286097 GCTGAAGAAGATAATAATGGCTTGTAC 58.714 37.037 0.00 0.00 0.00 2.90
3859 4704 1.059584 TGGGAGAGTTTGGACAGCCA 61.060 55.000 0.00 0.00 44.17 4.75
3892 4737 1.544691 CAGCAAATGCCAGAGAAGCTT 59.455 47.619 0.00 0.00 43.38 3.74
3971 4816 2.105006 TCCAACAGATCAAGCTGCTC 57.895 50.000 1.00 0.00 39.51 4.26
4047 4895 0.811616 GACGATGATGGTGCACCTCC 60.812 60.000 34.75 25.29 36.82 4.30
4048 4896 1.267574 ACGATGATGGTGCACCTCCT 61.268 55.000 34.75 21.52 36.82 3.69
4049 4897 0.531532 CGATGATGGTGCACCTCCTC 60.532 60.000 34.75 26.40 36.82 3.71
4105 4953 3.314080 CACCAACACACGGTTCTTTGTAT 59.686 43.478 0.00 0.00 37.72 2.29
4115 4963 1.659098 GTTCTTTGTATGACGAGGCGG 59.341 52.381 0.00 0.00 0.00 6.13
4133 4981 1.135024 CGGCCAATGATGAAAAGGTGG 60.135 52.381 2.24 0.00 0.00 4.61
4209 5057 1.134530 GACGACCATGAGCGACGAAG 61.135 60.000 12.95 0.00 0.00 3.79
4240 5088 2.863153 CGTAACGGGTCGACGAGT 59.137 61.111 9.92 9.09 38.88 4.18
4288 5136 2.232208 TGAGACTGACACTGCGATTGAT 59.768 45.455 0.00 0.00 0.00 2.57
4336 5184 1.609501 TAAGCACCGGAGCAGGAGT 60.610 57.895 26.04 1.20 36.85 3.85
4402 5250 3.393609 TGATGGATAAGCTTCTGAGGCAT 59.606 43.478 14.45 4.57 0.00 4.40
4448 5296 1.216710 GAGGAGCACAAGACGAGGG 59.783 63.158 0.00 0.00 0.00 4.30
4450 5298 2.435059 GAGCACAAGACGAGGGCC 60.435 66.667 0.00 0.00 0.00 5.80
4462 5310 1.920835 GAGGGCCAAGTCCAGGACT 60.921 63.158 17.31 17.31 45.64 3.85
4465 5313 2.671682 GCCAAGTCCAGGACTCCC 59.328 66.667 23.17 10.11 42.59 4.30
4531 5379 1.828768 GCCCAGTCATCCAGAGAGG 59.171 63.158 0.00 0.00 39.47 3.69
4694 5542 0.376502 GATCAGCGCTTTGAAGAGGC 59.623 55.000 7.50 0.00 0.00 4.70
4725 5596 0.250793 TGTCACCAGACCGTGTGTTT 59.749 50.000 0.00 0.00 44.33 2.83
4757 5629 1.000938 CAGATCTCATGACGGCGATCA 60.001 52.381 16.62 14.34 35.81 2.92
4763 5643 1.069049 TCATGACGGCGATCACATGAT 59.931 47.619 25.21 0.00 42.31 2.45
4793 5673 0.253044 TCCTGAGGTAGTTGCATGCC 59.747 55.000 16.68 0.00 0.00 4.40
4800 5680 0.453390 GTAGTTGCATGCCTCCTTGC 59.547 55.000 16.68 1.74 41.18 4.01
4875 5756 1.808531 TTGCATTGCTCCCTGTGTGC 61.809 55.000 10.49 0.00 0.00 4.57
4879 5760 1.028330 ATTGCTCCCTGTGTGCGATG 61.028 55.000 0.00 0.00 36.46 3.84
4913 5794 2.478539 GCATTGGTTGGAGAATTCGAGC 60.479 50.000 0.00 0.00 0.00 5.03
4986 5881 2.984471 GTTTGATGTGCTCATGTGCTTG 59.016 45.455 19.60 0.00 34.06 4.01
4987 5882 1.900245 TGATGTGCTCATGTGCTTGT 58.100 45.000 19.60 6.24 34.06 3.16
5057 5954 8.302438 AGTGATGATTTCTTCATTCTTGTTTCC 58.698 33.333 0.21 0.00 45.29 3.13
5177 6074 3.218398 CACGTTGAGTCGAAGCATTTTC 58.782 45.455 0.00 0.00 34.70 2.29
5199 6096 1.266989 GGTTGTTTCTCGCAGGAAAGG 59.733 52.381 1.96 0.00 36.12 3.11
5299 6203 1.617755 CGCACGCACGTTCTCTTCAT 61.618 55.000 0.00 0.00 0.00 2.57
5320 6224 6.721318 TCATAGAACTTCAAATTAGCTGGGT 58.279 36.000 0.00 0.00 0.00 4.51
5321 6225 6.823689 TCATAGAACTTCAAATTAGCTGGGTC 59.176 38.462 0.00 0.00 0.00 4.46
5322 6226 4.985538 AGAACTTCAAATTAGCTGGGTCA 58.014 39.130 0.00 0.00 0.00 4.02
5323 6227 5.006386 AGAACTTCAAATTAGCTGGGTCAG 58.994 41.667 0.00 0.00 34.12 3.51
5324 6228 4.373156 ACTTCAAATTAGCTGGGTCAGT 57.627 40.909 0.00 0.00 33.43 3.41
5349 6256 4.857588 CAGTACCGAACTAAACTACTGCTG 59.142 45.833 0.00 0.00 35.76 4.41
5350 6257 3.314541 ACCGAACTAAACTACTGCTGG 57.685 47.619 0.00 0.00 0.00 4.85
5352 6259 1.654105 CGAACTAAACTACTGCTGGCG 59.346 52.381 0.00 0.00 0.00 5.69
5376 6283 0.886490 GGAATCTGATGCCGGCGAAT 60.886 55.000 23.90 11.06 0.00 3.34
5395 6302 1.639722 TTCCGTGGATTCTCCTGACA 58.360 50.000 0.00 0.00 37.46 3.58
5396 6303 1.186200 TCCGTGGATTCTCCTGACAG 58.814 55.000 0.00 0.00 37.46 3.51
5397 6304 1.186200 CCGTGGATTCTCCTGACAGA 58.814 55.000 3.32 0.00 37.46 3.41
5398 6305 1.550524 CCGTGGATTCTCCTGACAGAA 59.449 52.381 3.32 0.00 37.46 3.02
5412 6319 2.816087 TGACAGAAGAAGAAAGCATGCC 59.184 45.455 15.66 0.00 0.00 4.40
5460 6367 2.944557 CATGACGCCGACGACGAG 60.945 66.667 11.37 5.05 43.93 4.18
5664 6581 1.535204 CCCTGCGCAAACCCAAGAAT 61.535 55.000 13.05 0.00 0.00 2.40
5678 6595 6.029346 ACCCAAGAATAAATCAGCAAACTG 57.971 37.500 0.00 0.00 45.95 3.16
5698 6615 3.811083 TGTACCCAACGAACAGAAACAT 58.189 40.909 0.00 0.00 0.00 2.71
5699 6616 4.958509 TGTACCCAACGAACAGAAACATA 58.041 39.130 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.524496 TGTCTGTGATCTAAAAGGTAGTAGTAA 57.476 33.333 0.00 0.00 0.00 2.24
22 23 9.524496 TTGTCTGTGATCTAAAAGGTAGTAGTA 57.476 33.333 0.00 0.00 0.00 1.82
23 24 8.418597 TTGTCTGTGATCTAAAAGGTAGTAGT 57.581 34.615 0.00 0.00 0.00 2.73
24 25 9.141400 GTTTGTCTGTGATCTAAAAGGTAGTAG 57.859 37.037 0.00 0.00 0.00 2.57
25 26 8.644216 TGTTTGTCTGTGATCTAAAAGGTAGTA 58.356 33.333 0.00 0.00 0.00 1.82
26 27 7.506114 TGTTTGTCTGTGATCTAAAAGGTAGT 58.494 34.615 0.00 0.00 0.00 2.73
27 28 7.872993 TCTGTTTGTCTGTGATCTAAAAGGTAG 59.127 37.037 0.00 0.00 0.00 3.18
28 29 7.732025 TCTGTTTGTCTGTGATCTAAAAGGTA 58.268 34.615 0.00 0.00 0.00 3.08
29 30 6.591935 TCTGTTTGTCTGTGATCTAAAAGGT 58.408 36.000 0.00 0.00 0.00 3.50
30 31 6.931281 TCTCTGTTTGTCTGTGATCTAAAAGG 59.069 38.462 0.00 0.00 0.00 3.11
31 32 7.117523 CCTCTCTGTTTGTCTGTGATCTAAAAG 59.882 40.741 0.00 0.00 0.00 2.27
32 33 6.931281 CCTCTCTGTTTGTCTGTGATCTAAAA 59.069 38.462 0.00 0.00 0.00 1.52
33 34 6.267699 TCCTCTCTGTTTGTCTGTGATCTAAA 59.732 38.462 0.00 0.00 0.00 1.85
34 35 5.775195 TCCTCTCTGTTTGTCTGTGATCTAA 59.225 40.000 0.00 0.00 0.00 2.10
35 36 5.325239 TCCTCTCTGTTTGTCTGTGATCTA 58.675 41.667 0.00 0.00 0.00 1.98
36 37 4.155709 TCCTCTCTGTTTGTCTGTGATCT 58.844 43.478 0.00 0.00 0.00 2.75
37 38 4.527509 TCCTCTCTGTTTGTCTGTGATC 57.472 45.455 0.00 0.00 0.00 2.92
38 39 4.963318 TTCCTCTCTGTTTGTCTGTGAT 57.037 40.909 0.00 0.00 0.00 3.06
39 40 4.697514 CTTTCCTCTCTGTTTGTCTGTGA 58.302 43.478 0.00 0.00 0.00 3.58
40 41 3.249559 GCTTTCCTCTCTGTTTGTCTGTG 59.750 47.826 0.00 0.00 0.00 3.66
41 42 3.135530 AGCTTTCCTCTCTGTTTGTCTGT 59.864 43.478 0.00 0.00 0.00 3.41
42 43 3.737850 AGCTTTCCTCTCTGTTTGTCTG 58.262 45.455 0.00 0.00 0.00 3.51
43 44 4.562552 GCTAGCTTTCCTCTCTGTTTGTCT 60.563 45.833 7.70 0.00 0.00 3.41
44 45 3.682377 GCTAGCTTTCCTCTCTGTTTGTC 59.318 47.826 7.70 0.00 0.00 3.18
45 46 3.326297 AGCTAGCTTTCCTCTCTGTTTGT 59.674 43.478 12.68 0.00 0.00 2.83
46 47 3.683822 CAGCTAGCTTTCCTCTCTGTTTG 59.316 47.826 16.46 0.00 0.00 2.93
47 48 3.867984 GCAGCTAGCTTTCCTCTCTGTTT 60.868 47.826 16.46 0.00 41.15 2.83
48 49 2.354604 GCAGCTAGCTTTCCTCTCTGTT 60.355 50.000 16.46 0.00 41.15 3.16
49 50 1.206849 GCAGCTAGCTTTCCTCTCTGT 59.793 52.381 16.46 0.00 41.15 3.41
50 51 1.473080 GGCAGCTAGCTTTCCTCTCTG 60.473 57.143 16.46 2.13 44.79 3.35
51 52 0.829990 GGCAGCTAGCTTTCCTCTCT 59.170 55.000 16.46 0.00 44.79 3.10
52 53 0.179059 GGGCAGCTAGCTTTCCTCTC 60.179 60.000 24.39 10.63 44.79 3.20
53 54 0.911525 TGGGCAGCTAGCTTTCCTCT 60.912 55.000 25.10 0.17 44.79 3.69
54 55 0.035056 TTGGGCAGCTAGCTTTCCTC 60.035 55.000 25.10 17.90 44.79 3.71
55 56 0.405585 TTTGGGCAGCTAGCTTTCCT 59.594 50.000 25.10 1.54 44.79 3.36
56 57 1.203287 CTTTTGGGCAGCTAGCTTTCC 59.797 52.381 16.46 19.13 44.79 3.13
57 58 1.203287 CCTTTTGGGCAGCTAGCTTTC 59.797 52.381 16.46 9.90 44.79 2.62
58 59 1.203050 TCCTTTTGGGCAGCTAGCTTT 60.203 47.619 16.46 0.00 44.79 3.51
59 60 0.405585 TCCTTTTGGGCAGCTAGCTT 59.594 50.000 16.46 0.00 44.79 3.74
60 61 0.405585 TTCCTTTTGGGCAGCTAGCT 59.594 50.000 12.68 12.68 44.79 3.32
61 62 0.813821 CTTCCTTTTGGGCAGCTAGC 59.186 55.000 6.62 6.62 44.65 3.42
62 63 2.087646 GTCTTCCTTTTGGGCAGCTAG 58.912 52.381 0.00 0.00 40.87 3.42
63 64 1.423541 TGTCTTCCTTTTGGGCAGCTA 59.576 47.619 0.00 0.00 40.87 3.32
64 65 0.185901 TGTCTTCCTTTTGGGCAGCT 59.814 50.000 0.00 0.00 40.87 4.24
65 66 0.600057 CTGTCTTCCTTTTGGGCAGC 59.400 55.000 0.00 0.00 40.87 5.25
66 67 2.276732 TCTGTCTTCCTTTTGGGCAG 57.723 50.000 0.00 0.00 40.87 4.85
67 68 2.746279 TTCTGTCTTCCTTTTGGGCA 57.254 45.000 0.00 0.00 40.87 5.36
68 69 3.384789 ACTTTTCTGTCTTCCTTTTGGGC 59.615 43.478 0.00 0.00 40.87 5.36
69 70 4.644685 TCACTTTTCTGTCTTCCTTTTGGG 59.355 41.667 0.00 0.00 40.87 4.12
70 71 5.835113 TCACTTTTCTGTCTTCCTTTTGG 57.165 39.130 0.00 0.00 42.21 3.28
71 72 6.017934 TCGATCACTTTTCTGTCTTCCTTTTG 60.018 38.462 0.00 0.00 0.00 2.44
72 73 6.055588 TCGATCACTTTTCTGTCTTCCTTTT 58.944 36.000 0.00 0.00 0.00 2.27
73 74 5.611374 TCGATCACTTTTCTGTCTTCCTTT 58.389 37.500 0.00 0.00 0.00 3.11
74 75 5.215252 TCGATCACTTTTCTGTCTTCCTT 57.785 39.130 0.00 0.00 0.00 3.36
75 76 4.873746 TCGATCACTTTTCTGTCTTCCT 57.126 40.909 0.00 0.00 0.00 3.36
76 77 5.467063 AGTTTCGATCACTTTTCTGTCTTCC 59.533 40.000 0.00 0.00 0.00 3.46
77 78 6.358762 CAGTTTCGATCACTTTTCTGTCTTC 58.641 40.000 0.00 0.00 0.00 2.87
78 79 5.277538 GCAGTTTCGATCACTTTTCTGTCTT 60.278 40.000 0.00 0.00 0.00 3.01
79 80 4.212214 GCAGTTTCGATCACTTTTCTGTCT 59.788 41.667 0.00 0.00 0.00 3.41
80 81 4.212214 AGCAGTTTCGATCACTTTTCTGTC 59.788 41.667 0.00 0.00 0.00 3.51
81 82 4.130118 AGCAGTTTCGATCACTTTTCTGT 58.870 39.130 0.00 0.00 0.00 3.41
82 83 4.377841 GGAGCAGTTTCGATCACTTTTCTG 60.378 45.833 0.00 0.00 0.00 3.02
83 84 3.748568 GGAGCAGTTTCGATCACTTTTCT 59.251 43.478 0.00 0.00 0.00 2.52
84 85 3.498397 TGGAGCAGTTTCGATCACTTTTC 59.502 43.478 0.00 0.00 0.00 2.29
85 86 3.251004 GTGGAGCAGTTTCGATCACTTTT 59.749 43.478 0.00 0.00 0.00 2.27
86 87 2.808543 GTGGAGCAGTTTCGATCACTTT 59.191 45.455 0.00 0.00 0.00 2.66
87 88 2.224281 TGTGGAGCAGTTTCGATCACTT 60.224 45.455 0.00 0.00 0.00 3.16
88 89 1.344438 TGTGGAGCAGTTTCGATCACT 59.656 47.619 0.00 0.00 0.00 3.41
89 90 1.461127 GTGTGGAGCAGTTTCGATCAC 59.539 52.381 0.00 0.00 0.00 3.06
90 91 1.069978 TGTGTGGAGCAGTTTCGATCA 59.930 47.619 0.00 0.00 0.00 2.92
91 92 1.461127 GTGTGTGGAGCAGTTTCGATC 59.539 52.381 0.00 0.00 0.00 3.69
92 93 1.512926 GTGTGTGGAGCAGTTTCGAT 58.487 50.000 0.00 0.00 0.00 3.59
93 94 0.874175 CGTGTGTGGAGCAGTTTCGA 60.874 55.000 0.00 0.00 0.00 3.71
94 95 0.874175 TCGTGTGTGGAGCAGTTTCG 60.874 55.000 0.00 0.00 0.00 3.46
95 96 1.195448 CATCGTGTGTGGAGCAGTTTC 59.805 52.381 0.00 0.00 0.00 2.78
96 97 1.229428 CATCGTGTGTGGAGCAGTTT 58.771 50.000 0.00 0.00 0.00 2.66
97 98 0.106708 ACATCGTGTGTGGAGCAGTT 59.893 50.000 0.00 0.00 40.28 3.16
98 99 0.106708 AACATCGTGTGTGGAGCAGT 59.893 50.000 0.00 0.00 41.14 4.40
99 100 0.792640 GAACATCGTGTGTGGAGCAG 59.207 55.000 0.00 0.00 41.14 4.24
100 101 0.392706 AGAACATCGTGTGTGGAGCA 59.607 50.000 0.00 0.00 41.14 4.26
101 102 1.071605 GAGAACATCGTGTGTGGAGC 58.928 55.000 0.00 0.00 41.14 4.70
102 103 2.332104 CAGAGAACATCGTGTGTGGAG 58.668 52.381 0.00 0.00 41.14 3.86
103 104 1.000843 CCAGAGAACATCGTGTGTGGA 59.999 52.381 0.00 0.00 41.14 4.02
104 105 1.432514 CCAGAGAACATCGTGTGTGG 58.567 55.000 0.00 0.00 41.14 4.17
105 106 1.432514 CCCAGAGAACATCGTGTGTG 58.567 55.000 0.00 0.00 41.14 3.82
106 107 0.320771 GCCCAGAGAACATCGTGTGT 60.321 55.000 0.00 0.00 44.84 3.72
107 108 1.354337 CGCCCAGAGAACATCGTGTG 61.354 60.000 0.00 0.00 0.00 3.82
108 109 1.079819 CGCCCAGAGAACATCGTGT 60.080 57.895 0.00 0.00 0.00 4.49
109 110 0.179100 ATCGCCCAGAGAACATCGTG 60.179 55.000 0.00 0.00 0.00 4.35
110 111 0.103208 GATCGCCCAGAGAACATCGT 59.897 55.000 0.00 0.00 0.00 3.73
111 112 0.387202 AGATCGCCCAGAGAACATCG 59.613 55.000 0.00 0.00 0.00 3.84
112 113 1.137872 ACAGATCGCCCAGAGAACATC 59.862 52.381 0.00 0.00 0.00 3.06
113 114 1.134580 CACAGATCGCCCAGAGAACAT 60.135 52.381 0.00 0.00 0.00 2.71
114 115 0.247460 CACAGATCGCCCAGAGAACA 59.753 55.000 0.00 0.00 0.00 3.18
115 116 1.086634 GCACAGATCGCCCAGAGAAC 61.087 60.000 0.00 0.00 0.00 3.01
116 117 1.219124 GCACAGATCGCCCAGAGAA 59.781 57.895 0.00 0.00 0.00 2.87
117 118 1.984026 TGCACAGATCGCCCAGAGA 60.984 57.895 0.00 0.00 0.00 3.10
118 119 1.812922 GTGCACAGATCGCCCAGAG 60.813 63.158 13.17 0.00 0.00 3.35
119 120 2.265739 GTGCACAGATCGCCCAGA 59.734 61.111 13.17 0.00 0.00 3.86
120 121 3.190849 CGTGCACAGATCGCCCAG 61.191 66.667 18.64 0.00 0.00 4.45
121 122 3.690280 TCGTGCACAGATCGCCCA 61.690 61.111 18.64 0.00 0.00 5.36
122 123 3.188786 GTCGTGCACAGATCGCCC 61.189 66.667 18.64 0.00 0.00 6.13
123 124 1.565156 TTTGTCGTGCACAGATCGCC 61.565 55.000 18.64 4.21 35.97 5.54
124 125 0.179240 CTTTGTCGTGCACAGATCGC 60.179 55.000 18.64 4.54 35.97 4.58
125 126 1.139989 ACTTTGTCGTGCACAGATCG 58.860 50.000 18.64 1.94 35.97 3.69
126 127 4.201724 GGATTACTTTGTCGTGCACAGATC 60.202 45.833 18.64 6.05 35.97 2.75
127 128 3.684788 GGATTACTTTGTCGTGCACAGAT 59.315 43.478 18.64 2.75 35.97 2.90
128 129 3.064207 GGATTACTTTGTCGTGCACAGA 58.936 45.455 18.64 12.26 35.97 3.41
129 130 2.805671 TGGATTACTTTGTCGTGCACAG 59.194 45.455 18.64 8.66 35.97 3.66
130 131 2.805671 CTGGATTACTTTGTCGTGCACA 59.194 45.455 18.64 0.81 0.00 4.57
131 132 2.412847 GCTGGATTACTTTGTCGTGCAC 60.413 50.000 6.82 6.82 0.00 4.57
132 133 1.804151 GCTGGATTACTTTGTCGTGCA 59.196 47.619 0.00 0.00 0.00 4.57
133 134 1.201921 CGCTGGATTACTTTGTCGTGC 60.202 52.381 0.00 0.00 0.00 5.34
134 135 1.393539 CCGCTGGATTACTTTGTCGTG 59.606 52.381 0.00 0.00 0.00 4.35
135 136 1.722011 CCGCTGGATTACTTTGTCGT 58.278 50.000 0.00 0.00 0.00 4.34
136 137 0.373716 GCCGCTGGATTACTTTGTCG 59.626 55.000 0.00 0.00 0.00 4.35
137 138 0.733150 GGCCGCTGGATTACTTTGTC 59.267 55.000 0.00 0.00 0.00 3.18
138 139 1.024579 CGGCCGCTGGATTACTTTGT 61.025 55.000 14.67 0.00 0.00 2.83
139 140 1.024579 ACGGCCGCTGGATTACTTTG 61.025 55.000 28.58 0.00 0.00 2.77
140 141 0.322187 AACGGCCGCTGGATTACTTT 60.322 50.000 28.58 4.49 0.00 2.66
141 142 1.024579 CAACGGCCGCTGGATTACTT 61.025 55.000 28.58 5.37 0.00 2.24
142 143 1.449601 CAACGGCCGCTGGATTACT 60.450 57.895 28.58 0.00 0.00 2.24
143 144 3.098555 CAACGGCCGCTGGATTAC 58.901 61.111 28.58 0.00 0.00 1.89
144 145 2.813226 AAGCAACGGCCGCTGGATTA 62.813 55.000 28.40 0.00 40.35 1.75
145 146 4.722700 AGCAACGGCCGCTGGATT 62.723 61.111 28.40 11.47 42.56 3.01
146 147 4.722700 AAGCAACGGCCGCTGGAT 62.723 61.111 28.40 13.32 40.35 3.41
155 156 3.295228 CTCCGCAACGAAGCAACGG 62.295 63.158 7.39 0.00 45.15 4.44
156 157 2.170985 CTCCGCAACGAAGCAACG 59.829 61.111 0.00 1.28 39.31 4.10
157 158 2.127232 GCTCCGCAACGAAGCAAC 60.127 61.111 0.00 0.00 36.06 4.17
158 159 2.590291 TGCTCCGCAACGAAGCAA 60.590 55.556 0.00 0.00 42.71 3.91
159 160 2.786539 ATCTGCTCCGCAACGAAGCA 62.787 55.000 0.05 0.05 43.40 3.91
160 161 1.639298 AATCTGCTCCGCAACGAAGC 61.639 55.000 0.00 0.00 38.41 3.86
161 162 0.371645 GAATCTGCTCCGCAACGAAG 59.628 55.000 0.00 0.00 38.41 3.79
162 163 1.019278 GGAATCTGCTCCGCAACGAA 61.019 55.000 0.00 0.00 38.41 3.85
163 164 1.447838 GGAATCTGCTCCGCAACGA 60.448 57.895 0.00 0.00 38.41 3.85
164 165 0.179111 TAGGAATCTGCTCCGCAACG 60.179 55.000 0.00 0.00 40.75 4.10
165 166 1.291132 GTAGGAATCTGCTCCGCAAC 58.709 55.000 0.00 0.00 40.75 4.17
166 167 0.179111 CGTAGGAATCTGCTCCGCAA 60.179 55.000 0.00 0.00 40.75 4.85
167 168 1.437573 CGTAGGAATCTGCTCCGCA 59.562 57.895 0.00 0.00 40.75 5.69
168 169 1.951631 GCGTAGGAATCTGCTCCGC 60.952 63.158 0.00 0.00 40.75 5.54
169 170 0.596083 CAGCGTAGGAATCTGCTCCG 60.596 60.000 0.00 0.00 40.75 4.63
170 171 0.249657 CCAGCGTAGGAATCTGCTCC 60.250 60.000 0.00 0.00 34.99 4.70
171 172 0.747255 TCCAGCGTAGGAATCTGCTC 59.253 55.000 0.00 0.00 34.99 4.26
172 173 1.418334 ATCCAGCGTAGGAATCTGCT 58.582 50.000 2.11 0.00 41.92 4.24
173 174 2.246719 AATCCAGCGTAGGAATCTGC 57.753 50.000 2.11 0.00 41.92 4.26
174 175 4.511826 GGTTAAATCCAGCGTAGGAATCTG 59.488 45.833 2.11 0.00 41.92 2.90
175 176 4.704965 GGTTAAATCCAGCGTAGGAATCT 58.295 43.478 2.11 0.00 41.92 2.40
176 177 3.493503 CGGTTAAATCCAGCGTAGGAATC 59.506 47.826 2.11 0.00 41.92 2.52
177 178 3.118519 ACGGTTAAATCCAGCGTAGGAAT 60.119 43.478 2.11 0.00 46.01 3.01
178 179 2.234414 ACGGTTAAATCCAGCGTAGGAA 59.766 45.455 2.11 0.00 46.01 3.36
179 180 1.826720 ACGGTTAAATCCAGCGTAGGA 59.173 47.619 0.44 0.44 46.01 2.94
180 181 2.304751 ACGGTTAAATCCAGCGTAGG 57.695 50.000 0.00 0.00 46.01 3.18
184 185 0.643820 GACGACGGTTAAATCCAGCG 59.356 55.000 0.00 0.00 40.95 5.18
185 186 1.659098 CAGACGACGGTTAAATCCAGC 59.341 52.381 0.00 0.00 0.00 4.85
186 187 1.659098 GCAGACGACGGTTAAATCCAG 59.341 52.381 0.00 0.00 0.00 3.86
187 188 1.001068 TGCAGACGACGGTTAAATCCA 59.999 47.619 0.00 0.00 0.00 3.41
188 189 1.717194 TGCAGACGACGGTTAAATCC 58.283 50.000 0.00 0.00 0.00 3.01
189 190 3.799137 TTTGCAGACGACGGTTAAATC 57.201 42.857 0.00 0.00 0.00 2.17
190 191 3.181524 CGATTTGCAGACGACGGTTAAAT 60.182 43.478 0.00 0.00 0.00 1.40
191 192 2.156117 CGATTTGCAGACGACGGTTAAA 59.844 45.455 0.00 0.00 0.00 1.52
192 193 1.722464 CGATTTGCAGACGACGGTTAA 59.278 47.619 0.00 0.00 0.00 2.01
193 194 1.336148 ACGATTTGCAGACGACGGTTA 60.336 47.619 14.13 0.00 0.00 2.85
194 195 0.599204 ACGATTTGCAGACGACGGTT 60.599 50.000 14.13 0.00 0.00 4.44
195 196 1.006571 ACGATTTGCAGACGACGGT 60.007 52.632 14.13 0.00 0.00 4.83
196 197 0.732880 AGACGATTTGCAGACGACGG 60.733 55.000 14.13 0.00 0.00 4.79
197 198 0.363512 CAGACGATTTGCAGACGACG 59.636 55.000 14.13 0.00 0.00 5.12
198 199 1.698165 TCAGACGATTTGCAGACGAC 58.302 50.000 14.13 9.13 0.00 4.34
199 200 2.654749 ATCAGACGATTTGCAGACGA 57.345 45.000 14.13 0.00 0.00 4.20
200 201 4.268644 ACAATATCAGACGATTTGCAGACG 59.731 41.667 0.00 7.49 32.73 4.18
201 202 5.555256 CGACAATATCAGACGATTTGCAGAC 60.555 44.000 0.00 0.00 32.73 3.51
202 203 4.504097 CGACAATATCAGACGATTTGCAGA 59.496 41.667 0.00 0.00 32.73 4.26
203 204 4.268644 ACGACAATATCAGACGATTTGCAG 59.731 41.667 0.00 0.00 32.73 4.41
204 205 4.180817 ACGACAATATCAGACGATTTGCA 58.819 39.130 0.00 0.00 32.73 4.08
205 206 4.318121 GGACGACAATATCAGACGATTTGC 60.318 45.833 0.00 0.00 32.73 3.68
206 207 4.085568 CGGACGACAATATCAGACGATTTG 60.086 45.833 0.00 0.00 32.73 2.32
207 208 4.042398 CGGACGACAATATCAGACGATTT 58.958 43.478 0.00 0.00 32.73 2.17
208 209 3.629058 CGGACGACAATATCAGACGATT 58.371 45.455 0.00 0.00 32.73 3.34
209 210 2.604855 GCGGACGACAATATCAGACGAT 60.605 50.000 0.00 0.00 35.50 3.73
210 211 1.268386 GCGGACGACAATATCAGACGA 60.268 52.381 0.00 0.00 0.00 4.20
211 212 1.121240 GCGGACGACAATATCAGACG 58.879 55.000 0.00 0.00 0.00 4.18
212 213 2.203800 TGCGGACGACAATATCAGAC 57.796 50.000 0.00 0.00 0.00 3.51
213 214 3.611766 GCTATGCGGACGACAATATCAGA 60.612 47.826 0.00 0.00 0.00 3.27
214 215 2.663602 GCTATGCGGACGACAATATCAG 59.336 50.000 0.00 0.00 0.00 2.90
215 216 2.035321 TGCTATGCGGACGACAATATCA 59.965 45.455 0.00 0.00 0.00 2.15
216 217 2.408704 GTGCTATGCGGACGACAATATC 59.591 50.000 0.00 0.00 0.00 1.63
217 218 2.035961 AGTGCTATGCGGACGACAATAT 59.964 45.455 0.00 0.00 39.22 1.28
218 219 1.407618 AGTGCTATGCGGACGACAATA 59.592 47.619 0.00 0.00 39.22 1.90
219 220 0.175760 AGTGCTATGCGGACGACAAT 59.824 50.000 0.00 0.00 39.22 2.71
220 221 0.735978 CAGTGCTATGCGGACGACAA 60.736 55.000 0.00 0.00 39.22 3.18
221 222 1.153842 CAGTGCTATGCGGACGACA 60.154 57.895 0.00 0.00 39.22 4.35
222 223 2.517450 GCAGTGCTATGCGGACGAC 61.517 63.158 8.18 0.00 39.22 4.34
223 224 2.202743 GCAGTGCTATGCGGACGA 60.203 61.111 8.18 0.00 39.22 4.20
229 230 2.485426 TCACTTTTGAGCAGTGCTATGC 59.515 45.455 19.77 6.47 46.88 3.14
230 231 4.201891 GGATCACTTTTGAGCAGTGCTATG 60.202 45.833 19.77 7.65 40.14 2.23
231 232 3.944015 GGATCACTTTTGAGCAGTGCTAT 59.056 43.478 19.77 4.88 40.14 2.97
232 233 3.338249 GGATCACTTTTGAGCAGTGCTA 58.662 45.455 19.77 0.00 40.14 3.49
233 234 2.157738 GGATCACTTTTGAGCAGTGCT 58.842 47.619 19.86 19.86 40.14 4.40
234 235 1.200948 GGGATCACTTTTGAGCAGTGC 59.799 52.381 7.13 7.13 40.14 4.40
235 236 2.486982 CAGGGATCACTTTTGAGCAGTG 59.513 50.000 0.00 0.00 40.14 3.66
236 237 2.373169 TCAGGGATCACTTTTGAGCAGT 59.627 45.455 0.00 0.00 40.14 4.40
237 238 3.063510 TCAGGGATCACTTTTGAGCAG 57.936 47.619 0.00 0.00 40.14 4.24
238 239 3.507162 TTCAGGGATCACTTTTGAGCA 57.493 42.857 0.00 0.00 40.14 4.26
239 240 4.460382 TGAATTCAGGGATCACTTTTGAGC 59.540 41.667 3.38 0.00 37.43 4.26
240 241 6.770746 ATGAATTCAGGGATCACTTTTGAG 57.229 37.500 14.54 0.00 34.35 3.02
241 242 7.543359 AAATGAATTCAGGGATCACTTTTGA 57.457 32.000 14.54 0.00 35.73 2.69
242 243 9.880157 ATAAAATGAATTCAGGGATCACTTTTG 57.120 29.630 14.54 0.00 0.00 2.44
246 247 8.699130 GGAAATAAAATGAATTCAGGGATCACT 58.301 33.333 14.54 0.00 0.00 3.41
247 248 8.477256 TGGAAATAAAATGAATTCAGGGATCAC 58.523 33.333 14.54 0.00 0.00 3.06
248 249 8.606754 TGGAAATAAAATGAATTCAGGGATCA 57.393 30.769 14.54 1.26 0.00 2.92
249 250 9.702494 GATGGAAATAAAATGAATTCAGGGATC 57.298 33.333 14.54 5.72 0.00 3.36
250 251 9.443365 AGATGGAAATAAAATGAATTCAGGGAT 57.557 29.630 14.54 2.08 0.00 3.85
251 252 8.698210 CAGATGGAAATAAAATGAATTCAGGGA 58.302 33.333 14.54 0.00 0.00 4.20
252 253 8.480501 ACAGATGGAAATAAAATGAATTCAGGG 58.519 33.333 14.54 0.00 0.00 4.45
284 285 8.253113 ACGGTAAAAGGAACTCGAAATAGATAA 58.747 33.333 0.00 0.00 38.49 1.75
294 295 5.865552 TGATCTAAACGGTAAAAGGAACTCG 59.134 40.000 0.00 0.00 38.49 4.18
301 302 7.416154 TTGTCTGTGATCTAAACGGTAAAAG 57.584 36.000 0.00 0.00 0.00 2.27
314 315 3.131223 TCCTCTCCGATTTGTCTGTGATC 59.869 47.826 0.00 0.00 0.00 2.92
316 317 2.525368 TCCTCTCCGATTTGTCTGTGA 58.475 47.619 0.00 0.00 0.00 3.58
317 318 3.319137 TTCCTCTCCGATTTGTCTGTG 57.681 47.619 0.00 0.00 0.00 3.66
319 320 2.675348 GCTTTCCTCTCCGATTTGTCTG 59.325 50.000 0.00 0.00 0.00 3.51
320 321 2.355209 GGCTTTCCTCTCCGATTTGTCT 60.355 50.000 0.00 0.00 0.00 3.41
321 322 2.010497 GGCTTTCCTCTCCGATTTGTC 58.990 52.381 0.00 0.00 0.00 3.18
327 331 2.660064 GGCTGGCTTTCCTCTCCGA 61.660 63.158 0.00 0.00 0.00 4.55
341 345 1.603455 TCTTCCTTTTGGGCGGCTG 60.603 57.895 9.56 0.00 40.87 4.85
345 349 1.604604 TTCTGTCTTCCTTTTGGGCG 58.395 50.000 0.00 0.00 40.87 6.13
358 362 2.699954 TCAGGGATCGCTTTTTCTGTC 58.300 47.619 10.01 0.00 0.00 3.51
359 363 2.859165 TCAGGGATCGCTTTTTCTGT 57.141 45.000 10.01 0.00 0.00 3.41
363 367 5.420104 AGAATGAATTCAGGGATCGCTTTTT 59.580 36.000 14.54 4.08 39.23 1.94
377 388 4.393834 GGCTTCCCCTCTAGAATGAATTC 58.606 47.826 0.00 0.00 37.06 2.17
397 408 0.753111 CATGGCCAGAAACTAGGGGC 60.753 60.000 13.05 0.00 46.62 5.80
408 419 0.949397 CATCCACGATTCATGGCCAG 59.051 55.000 13.05 3.43 37.13 4.85
421 432 2.863704 GCCAAAGTGTTTCTGCATCCAC 60.864 50.000 0.00 0.00 0.00 4.02
499 891 4.099266 TCCCACCATTTCAACTTCAGTTTG 59.901 41.667 0.00 0.00 35.83 2.93
500 892 4.285863 TCCCACCATTTCAACTTCAGTTT 58.714 39.130 0.00 0.00 35.83 2.66
501 893 3.891366 CTCCCACCATTTCAACTTCAGTT 59.109 43.478 0.00 0.00 39.12 3.16
502 894 3.490348 CTCCCACCATTTCAACTTCAGT 58.510 45.455 0.00 0.00 0.00 3.41
542 992 0.250510 TGTCCATTTGTGGCGCAGTA 60.251 50.000 10.83 0.00 0.00 2.74
577 1028 9.722056 GAGTAACTGCTATTGGAAATTTATGTG 57.278 33.333 0.00 0.00 0.00 3.21
578 1029 9.686683 AGAGTAACTGCTATTGGAAATTTATGT 57.313 29.630 0.00 0.00 0.00 2.29
592 1043 3.783642 AGAGAGGGAGAGAGTAACTGCTA 59.216 47.826 0.00 0.00 0.00 3.49
619 1078 6.432783 AGACGAACAGCAGCTTCTAGATATAT 59.567 38.462 0.00 0.00 0.00 0.86
621 1080 4.582656 AGACGAACAGCAGCTTCTAGATAT 59.417 41.667 0.00 0.00 0.00 1.63
623 1082 2.757868 AGACGAACAGCAGCTTCTAGAT 59.242 45.455 0.00 0.00 0.00 1.98
659 1406 2.487746 ATTGGGTGGGTTTTCTTGGT 57.512 45.000 0.00 0.00 0.00 3.67
673 1421 3.204827 CGCGCAGGAGGAATTGGG 61.205 66.667 8.75 0.00 0.00 4.12
712 1460 2.664081 CCAGGTGGCTGAGGAGACC 61.664 68.421 0.00 0.00 0.00 3.85
772 1523 1.477295 GGAGGTAGTGGAGAAGGAACG 59.523 57.143 0.00 0.00 0.00 3.95
818 1569 0.618981 GGGAGAAATTGGGAGGACGT 59.381 55.000 0.00 0.00 0.00 4.34
828 1598 3.011821 GGGAGGAGAAAAGGGGAGAAATT 59.988 47.826 0.00 0.00 0.00 1.82
883 1664 4.715130 TGGAGGTCGGGTGGGGAG 62.715 72.222 0.00 0.00 0.00 4.30
888 1669 3.391382 GGAGGTGGAGGTCGGGTG 61.391 72.222 0.00 0.00 0.00 4.61
923 1704 1.519455 CCCTCTTCGCCTACGCTTG 60.519 63.158 0.00 0.00 39.84 4.01
939 1720 1.746991 CCGCCTTTTGCTCTCTCCC 60.747 63.158 0.00 0.00 38.05 4.30
940 1721 2.402572 GCCGCCTTTTGCTCTCTCC 61.403 63.158 0.00 0.00 38.05 3.71
1046 1857 2.368878 AAGGGAGGGATCCAGGGC 60.369 66.667 15.23 0.00 0.00 5.19
1063 1874 1.381327 GGATGGACAGACGGGGAGA 60.381 63.158 0.00 0.00 0.00 3.71
1073 1884 1.841302 AAGCAAGAGCCGGATGGACA 61.841 55.000 5.05 0.00 43.56 4.02
1095 1906 1.739562 CTCACGGACCAGCAAGAGC 60.740 63.158 0.00 0.00 42.56 4.09
1098 1909 1.739562 GCTCTCACGGACCAGCAAG 60.740 63.158 0.00 0.00 0.00 4.01
1156 1967 0.171903 CCAAAAATCCTCAGCCGCTG 59.828 55.000 14.62 14.62 0.00 5.18
1162 1973 5.188359 ACAAATCATCCCCAAAAATCCTCAG 59.812 40.000 0.00 0.00 0.00 3.35
1176 1987 1.468054 GGCGAGCAACACAAATCATCC 60.468 52.381 0.00 0.00 0.00 3.51
1238 2049 3.943479 AACGACGGCCGCAGCAATA 62.943 57.895 28.58 0.00 43.32 1.90
1252 2063 1.541379 TCCGGACTTCTGATGAACGA 58.459 50.000 0.00 0.00 0.00 3.85
1253 2064 2.586258 ATCCGGACTTCTGATGAACG 57.414 50.000 6.12 2.01 0.00 3.95
1347 2160 0.610232 CCAGCCAAACAAGAGGGGAG 60.610 60.000 0.00 0.00 0.00 4.30
1352 2165 3.691609 GGTAATCTCCAGCCAAACAAGAG 59.308 47.826 0.00 0.00 0.00 2.85
1404 2220 1.608025 GCTGGACGAACACATCCAAGA 60.608 52.381 0.00 0.00 44.42 3.02
1407 2223 0.396435 AAGCTGGACGAACACATCCA 59.604 50.000 0.00 0.00 42.88 3.41
1409 2225 1.400242 GCAAAGCTGGACGAACACATC 60.400 52.381 0.00 0.00 0.00 3.06
1437 2253 4.026052 GGACAGATTCCCAAAACCATCAT 58.974 43.478 0.00 0.00 38.70 2.45
1459 2275 0.243636 GCGACACAATCCCCCAAAAG 59.756 55.000 0.00 0.00 0.00 2.27
1463 2279 1.303236 CAAGCGACACAATCCCCCA 60.303 57.895 0.00 0.00 0.00 4.96
1487 2303 0.029035 CAAATCGAGGATGCAGCAGC 59.971 55.000 3.51 0.62 42.57 5.25
1488 2304 0.661552 CCAAATCGAGGATGCAGCAG 59.338 55.000 3.51 0.00 0.00 4.24
1653 2486 3.060602 GACGTCTTTCCTCAGGAACTTG 58.939 50.000 5.30 0.00 41.87 3.16
1724 2557 1.227943 TGAGTTGAGTGTGCAGGCC 60.228 57.895 0.00 0.00 0.00 5.19
1756 2589 9.547753 ACACTGCTGGTAATAATCATTAGTAAG 57.452 33.333 0.00 0.00 0.00 2.34
1785 2618 3.699038 AGCTGTTTGCACCAAGTTAAAGA 59.301 39.130 0.00 0.00 45.94 2.52
1815 2648 6.644347 TGCCCAACATTTACAAAAGAAAGAA 58.356 32.000 0.00 0.00 0.00 2.52
1832 2665 2.071778 ATACACATCCCATGCCCAAC 57.928 50.000 0.00 0.00 0.00 3.77
1836 2669 7.609146 CCATCATATATATACACATCCCATGCC 59.391 40.741 0.00 0.00 0.00 4.40
1882 2715 0.182061 TCAGCCCTTCCATCTGCATC 59.818 55.000 0.00 0.00 0.00 3.91
1998 2831 2.951642 CAATCCCAGCATAAACATCGGT 59.048 45.455 0.00 0.00 0.00 4.69
2070 2903 7.591421 TGAAACATATGGCATCAATTGATCT 57.409 32.000 18.16 6.32 31.21 2.75
2121 2954 7.016153 ACCTCATACACCAGAAAATGTAGAA 57.984 36.000 0.00 0.00 34.88 2.10
2122 2955 6.440647 AGACCTCATACACCAGAAAATGTAGA 59.559 38.462 0.00 0.00 34.88 2.59
2358 3192 4.377839 TGCAGTTTCGAGATCCTCTAAG 57.622 45.455 0.00 0.00 0.00 2.18
2394 3228 1.807142 GAAGCTTTTTCAGACGGAGGG 59.193 52.381 0.00 0.00 0.00 4.30
2395 3229 1.807142 GGAAGCTTTTTCAGACGGAGG 59.193 52.381 0.00 0.00 0.00 4.30
2398 3232 1.897560 AGGGAAGCTTTTTCAGACGG 58.102 50.000 0.00 0.00 0.00 4.79
2399 3233 5.393962 CATTAAGGGAAGCTTTTTCAGACG 58.606 41.667 0.00 0.00 0.00 4.18
2400 3234 5.476945 TCCATTAAGGGAAGCTTTTTCAGAC 59.523 40.000 6.34 0.00 38.24 3.51
2401 3235 5.640147 TCCATTAAGGGAAGCTTTTTCAGA 58.360 37.500 6.34 0.00 38.24 3.27
2402 3236 5.982890 TCCATTAAGGGAAGCTTTTTCAG 57.017 39.130 6.34 0.00 38.24 3.02
2403 3237 5.779771 ACATCCATTAAGGGAAGCTTTTTCA 59.220 36.000 13.71 0.00 41.12 2.69
2404 3238 6.286240 ACATCCATTAAGGGAAGCTTTTTC 57.714 37.500 13.71 0.00 41.12 2.29
2405 3239 7.841222 AGATACATCCATTAAGGGAAGCTTTTT 59.159 33.333 13.71 0.00 41.12 1.94
2406 3240 7.357471 AGATACATCCATTAAGGGAAGCTTTT 58.643 34.615 13.71 0.00 41.12 2.27
2407 3241 6.915786 AGATACATCCATTAAGGGAAGCTTT 58.084 36.000 13.71 0.00 41.12 3.51
2408 3242 6.521527 AGATACATCCATTAAGGGAAGCTT 57.478 37.500 13.71 0.00 41.12 3.74
2409 3243 6.296145 GCTAGATACATCCATTAAGGGAAGCT 60.296 42.308 13.71 7.61 41.12 3.74
2410 3244 5.877564 GCTAGATACATCCATTAAGGGAAGC 59.122 44.000 13.71 11.59 41.12 3.86
2411 3245 7.009179 TGCTAGATACATCCATTAAGGGAAG 57.991 40.000 13.71 11.54 41.12 3.46
2412 3246 7.237471 TGATGCTAGATACATCCATTAAGGGAA 59.763 37.037 13.71 0.00 42.68 3.97
2413 3247 6.730507 TGATGCTAGATACATCCATTAAGGGA 59.269 38.462 11.94 11.94 42.68 4.20
2414 3248 6.950842 TGATGCTAGATACATCCATTAAGGG 58.049 40.000 0.00 0.00 42.68 3.95
2415 3249 8.099537 ACTTGATGCTAGATACATCCATTAAGG 58.900 37.037 0.00 0.00 42.68 2.69
2416 3250 9.499479 AACTTGATGCTAGATACATCCATTAAG 57.501 33.333 0.00 0.94 42.68 1.85
2417 3251 9.851686 AAACTTGATGCTAGATACATCCATTAA 57.148 29.630 0.00 0.00 42.68 1.40
2418 3252 9.851686 AAAACTTGATGCTAGATACATCCATTA 57.148 29.630 0.00 0.00 42.68 1.90
2419 3253 8.757982 AAAACTTGATGCTAGATACATCCATT 57.242 30.769 0.00 0.00 42.68 3.16
2420 3254 8.757982 AAAAACTTGATGCTAGATACATCCAT 57.242 30.769 0.00 0.00 42.68 3.41
2442 3276 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
2443 3277 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2444 3278 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
2445 3279 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
2446 3280 0.467384 CTAGTACTCCCTCCGTCCGA 59.533 60.000 0.00 0.00 0.00 4.55
2447 3281 1.165284 GCTAGTACTCCCTCCGTCCG 61.165 65.000 0.00 0.00 0.00 4.79
2448 3282 0.183252 AGCTAGTACTCCCTCCGTCC 59.817 60.000 0.00 0.00 0.00 4.79
2449 3283 2.055684 AAGCTAGTACTCCCTCCGTC 57.944 55.000 0.00 0.00 0.00 4.79
2450 3284 2.025131 AGAAAGCTAGTACTCCCTCCGT 60.025 50.000 0.00 0.00 0.00 4.69
2451 3285 2.359531 CAGAAAGCTAGTACTCCCTCCG 59.640 54.545 0.00 0.00 0.00 4.63
2452 3286 2.101750 GCAGAAAGCTAGTACTCCCTCC 59.898 54.545 0.00 0.00 41.15 4.30
2453 3287 2.761208 TGCAGAAAGCTAGTACTCCCTC 59.239 50.000 0.00 0.00 45.94 4.30
2454 3288 2.498078 GTGCAGAAAGCTAGTACTCCCT 59.502 50.000 0.00 0.00 45.94 4.20
2455 3289 2.233922 TGTGCAGAAAGCTAGTACTCCC 59.766 50.000 0.00 0.00 45.94 4.30
2456 3290 3.594603 TGTGCAGAAAGCTAGTACTCC 57.405 47.619 0.00 0.00 45.94 3.85
2457 3291 5.409826 ACAATTGTGCAGAAAGCTAGTACTC 59.590 40.000 11.07 0.00 45.94 2.59
2458 3292 5.308825 ACAATTGTGCAGAAAGCTAGTACT 58.691 37.500 11.07 0.00 45.94 2.73
2459 3293 5.613358 ACAATTGTGCAGAAAGCTAGTAC 57.387 39.130 11.07 0.00 45.94 2.73
2460 3294 5.762711 TGAACAATTGTGCAGAAAGCTAGTA 59.237 36.000 15.66 0.00 45.94 1.82
2461 3295 4.580167 TGAACAATTGTGCAGAAAGCTAGT 59.420 37.500 15.66 0.00 45.94 2.57
2462 3296 5.112220 TGAACAATTGTGCAGAAAGCTAG 57.888 39.130 15.66 0.00 45.94 3.42
2475 3309 8.908786 ATATACCCACTGATACTGAACAATTG 57.091 34.615 3.24 3.24 0.00 2.32
2522 3363 6.546972 TGATATAGCAAAACACGAACAACA 57.453 33.333 0.00 0.00 0.00 3.33
2546 3389 5.039920 TGTAAGAGGTGCATATGCTTGAT 57.960 39.130 27.13 11.50 42.66 2.57
2620 3463 8.926710 GCACCATATGTTAGTGATCAACTATAC 58.073 37.037 12.98 4.47 41.10 1.47
2637 3480 8.501580 CATTCACTGTAAATAGAGCACCATATG 58.498 37.037 0.00 0.00 0.00 1.78
2640 3483 5.297776 GCATTCACTGTAAATAGAGCACCAT 59.702 40.000 0.00 0.00 0.00 3.55
2681 3524 4.376819 CGAAAATCAGAGTTGACACAGCTC 60.377 45.833 7.36 7.36 41.04 4.09
2811 3654 6.036300 ACTCAAAACACAAAAATCACAGCATG 59.964 34.615 0.00 0.00 46.00 4.06
3145 3990 2.237143 CCCTGATGCTTCAACCTCTACA 59.763 50.000 3.65 0.00 0.00 2.74
3232 4077 3.855689 AATTCTTGCTTCCATTCACGG 57.144 42.857 0.00 0.00 0.00 4.94
3313 4158 8.394121 GGTTTATCTGAATAGTTCTTTCTGCTG 58.606 37.037 0.00 0.00 0.00 4.41
3421 4266 0.320508 GACCGCCCTTTTTCTCGTCT 60.321 55.000 0.00 0.00 0.00 4.18
3549 4394 6.043938 AGTTTCCTTTAGGTCTGTGTATGGAA 59.956 38.462 0.00 0.00 36.34 3.53
3608 4453 1.335132 TGGGTCCGATGGTAGCCTTC 61.335 60.000 0.00 0.00 34.30 3.46
3740 4585 2.858745 TGGAGGAACCTTGTTTACTGC 58.141 47.619 0.00 0.00 39.86 4.40
3766 4611 2.152699 CGTCGCTCTGTACGGCTTG 61.153 63.158 0.00 0.00 35.51 4.01
3817 4662 0.370273 GCCGTGCTCGATTGTACAAG 59.630 55.000 14.65 0.95 39.71 3.16
3823 4668 0.514255 CCATATGCCGTGCTCGATTG 59.486 55.000 10.21 0.00 39.71 2.67
3859 4704 2.205022 TTTGCTGCCTATCTTGCACT 57.795 45.000 0.00 0.00 35.01 4.40
3892 4737 2.359850 GGAGGCCGCATGTTGACA 60.360 61.111 9.31 0.00 0.00 3.58
3971 4816 1.135689 GCCGTTGAGCTTGTAACCATG 60.136 52.381 0.00 0.00 0.00 3.66
4105 4953 3.030168 ATCATTGGCCGCCTCGTCA 62.030 57.895 11.61 0.00 0.00 4.35
4115 4963 2.014335 GCCACCTTTTCATCATTGGC 57.986 50.000 0.00 0.00 42.57 4.52
4133 4981 2.524148 ACCAGGGGTTTGGCTTGC 60.524 61.111 0.00 0.00 42.18 4.01
4209 5057 3.642778 TTACGCCTGCTCGAGTGCC 62.643 63.158 15.13 0.00 0.00 5.01
4240 5088 1.877576 CTGTCTGGTAGTCGCTGCCA 61.878 60.000 13.94 13.94 43.60 4.92
4246 5094 1.065345 TCCTCCTCTGTCTGGTAGTCG 60.065 57.143 0.00 0.00 0.00 4.18
4336 5184 1.612146 TCCTTCACGGGGATGAGCA 60.612 57.895 0.00 0.00 0.00 4.26
4402 5250 2.239654 CTCCATCCCCTTCTTGCTGTAA 59.760 50.000 0.00 0.00 0.00 2.41
4448 5296 2.671682 GGGAGTCCTGGACTTGGC 59.328 66.667 28.90 16.77 43.53 4.52
4450 5298 2.982130 CGGGGAGTCCTGGACTTG 59.018 66.667 28.90 15.82 43.53 3.16
4465 5313 3.081311 TTGATCTGCTCGAGGCCGG 62.081 63.158 15.58 0.00 40.92 6.13
4507 5355 4.899239 GGATGACTGGGCGCTCCG 62.899 72.222 3.94 0.00 38.76 4.63
4685 5533 1.538047 GCAACTCATGGCCTCTTCAA 58.462 50.000 3.32 0.00 0.00 2.69
4725 5596 4.020307 TCATGAGATCTGTTGCTGTGGTAA 60.020 41.667 0.00 0.00 0.00 2.85
4757 5629 4.554683 TCAGGAGATCCTCTGAATCATGT 58.445 43.478 11.73 0.00 46.65 3.21
4763 5643 3.529734 ACTACCTCAGGAGATCCTCTGAA 59.470 47.826 14.15 2.75 46.65 3.02
4793 5673 2.270986 GCCACCAAGGTGCAAGGAG 61.271 63.158 13.75 0.46 44.16 3.69
4825 5705 6.374333 TGCAAGTATACCACCAAAGAAAGATC 59.626 38.462 0.00 0.00 0.00 2.75
4875 5756 4.320861 CCAATGCTCTCTACCTAGACATCG 60.321 50.000 0.00 0.00 0.00 3.84
4879 5760 4.442192 CCAACCAATGCTCTCTACCTAGAC 60.442 50.000 0.00 0.00 0.00 2.59
4913 5794 3.506067 GGTATTCCCTATCAAATTGCCCG 59.494 47.826 0.00 0.00 0.00 6.13
4986 5881 6.153067 GGCATCTATACATACACTGACAGAC 58.847 44.000 10.08 0.00 0.00 3.51
4987 5882 5.048713 CGGCATCTATACATACACTGACAGA 60.049 44.000 10.08 0.00 0.00 3.41
5177 6074 1.593196 TTCCTGCGAGAAACAACCAG 58.407 50.000 0.00 0.00 0.00 4.00
5253 6151 2.561478 TTGTTAGGCCAGGAAGTCAC 57.439 50.000 5.01 0.00 0.00 3.67
5299 6203 6.121776 TGACCCAGCTAATTTGAAGTTCTA 57.878 37.500 4.17 0.00 0.00 2.10
5324 6228 5.242393 AGCAGTAGTTTAGTTCGGTACTGAA 59.758 40.000 13.25 13.25 42.06 3.02
5349 6256 2.622436 GGCATCAGATTCCTATACGCC 58.378 52.381 0.00 0.00 0.00 5.68
5350 6257 2.263077 CGGCATCAGATTCCTATACGC 58.737 52.381 0.00 0.00 0.00 4.42
5352 6259 2.622436 GCCGGCATCAGATTCCTATAC 58.378 52.381 24.80 0.00 0.00 1.47
5395 6302 2.444421 CCTGGCATGCTTTCTTCTTCT 58.556 47.619 18.92 0.00 0.00 2.85
5396 6303 1.135170 GCCTGGCATGCTTTCTTCTTC 60.135 52.381 18.92 0.00 0.00 2.87
5397 6304 0.893447 GCCTGGCATGCTTTCTTCTT 59.107 50.000 18.92 0.00 0.00 2.52
5398 6305 0.251474 TGCCTGGCATGCTTTCTTCT 60.251 50.000 19.30 0.00 31.71 2.85
5412 6319 3.342370 TAGCTGCGAGACGTGCCTG 62.342 63.158 0.00 0.00 31.66 4.85
5460 6367 2.515523 ACAGCCGCATCCTGCATC 60.516 61.111 0.00 0.00 45.36 3.91
5629 6536 2.032681 GGTCTCCTGCCGCTGTTT 59.967 61.111 0.00 0.00 0.00 2.83
5664 6581 4.214545 CGTTGGGTACAGTTTGCTGATTTA 59.785 41.667 1.30 0.00 45.28 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.