Multiple sequence alignment - TraesCS6A01G131600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G131600 chr6A 100.000 5607 0 0 1 5607 104047882 104053488 0.000000e+00 10355.0
1 TraesCS6A01G131600 chr6A 81.377 247 44 2 430 675 64772341 64772096 3.430000e-47 200.0
2 TraesCS6A01G131600 chr6D 91.679 2644 143 34 701 3307 86543151 86545754 0.000000e+00 3592.0
3 TraesCS6A01G131600 chr6D 95.260 2152 73 13 3471 5607 86545760 86547897 0.000000e+00 3382.0
4 TraesCS6A01G131600 chr6D 93.991 233 11 3 192 424 86542924 86543153 3.210000e-92 350.0
5 TraesCS6A01G131600 chr6D 85.263 190 10 2 1 187 86542391 86542565 4.460000e-41 180.0
6 TraesCS6A01G131600 chr6D 94.118 102 2 2 3304 3405 351138649 351138746 9.730000e-33 152.0
7 TraesCS6A01G131600 chr6D 88.618 123 9 3 3287 3407 200398693 200398812 1.630000e-30 145.0
8 TraesCS6A01G131600 chr6D 94.667 75 3 1 5511 5585 83221517 83221444 1.280000e-21 115.0
9 TraesCS6A01G131600 chr6D 89.041 73 3 4 3415 3483 277647153 277647224 1.000000e-12 86.1
10 TraesCS6A01G131600 chr6B 93.305 1404 56 15 795 2168 163965239 163966634 0.000000e+00 2037.0
11 TraesCS6A01G131600 chr6B 92.467 1301 69 8 2165 3456 163966706 163967986 0.000000e+00 1832.0
12 TraesCS6A01G131600 chr6B 88.212 1493 120 22 3460 4933 163968025 163969480 0.000000e+00 1731.0
13 TraesCS6A01G131600 chr6B 87.796 549 44 11 5017 5552 163969485 163970023 6.170000e-174 621.0
14 TraesCS6A01G131600 chr5A 82.661 248 42 1 429 675 580951044 580950797 9.460000e-53 219.0
15 TraesCS6A01G131600 chr4A 82.000 250 43 2 427 675 572708412 572708660 1.580000e-50 211.0
16 TraesCS6A01G131600 chr7A 82.186 247 39 4 430 675 126757301 126757059 2.050000e-49 207.0
17 TraesCS6A01G131600 chr7A 91.150 113 7 2 3303 3415 466252974 466253083 3.500000e-32 150.0
18 TraesCS6A01G131600 chr3A 81.855 248 43 2 429 675 725959698 725959944 2.050000e-49 207.0
19 TraesCS6A01G131600 chr3A 81.377 247 44 2 430 675 589179556 589179801 3.430000e-47 200.0
20 TraesCS6A01G131600 chr2A 81.154 260 45 4 428 684 85287264 85287522 7.360000e-49 206.0
21 TraesCS6A01G131600 chr2A 81.452 248 45 1 429 675 497695597 497695844 9.520000e-48 202.0
22 TraesCS6A01G131600 chr5B 81.275 251 44 3 428 676 44041095 44041344 3.430000e-47 200.0
23 TraesCS6A01G131600 chr7B 94.118 102 3 1 3305 3406 192854163 192854261 9.730000e-33 152.0
24 TraesCS6A01G131600 chr5D 93.333 105 4 1 3306 3410 202429531 202429430 9.730000e-33 152.0
25 TraesCS6A01G131600 chr5D 90.000 120 7 3 3294 3412 526139165 526139280 3.500000e-32 150.0
26 TraesCS6A01G131600 chr5D 88.136 59 3 3 3402 3460 481269045 481269099 3.630000e-07 67.6
27 TraesCS6A01G131600 chr1D 93.269 104 4 2 3306 3409 12312568 12312468 3.500000e-32 150.0
28 TraesCS6A01G131600 chr1B 93.269 104 4 1 3303 3406 572529458 572529358 3.500000e-32 150.0
29 TraesCS6A01G131600 chr1A 92.453 106 5 1 3303 3408 49276353 49276251 1.260000e-31 148.0
30 TraesCS6A01G131600 chr4B 87.671 73 8 1 3415 3486 28165898 28165826 3.600000e-12 84.2
31 TraesCS6A01G131600 chr4B 87.719 57 6 1 3402 3458 656875645 656875590 1.300000e-06 65.8
32 TraesCS6A01G131600 chr3B 93.103 58 3 1 3415 3472 395706413 395706357 3.600000e-12 84.2
33 TraesCS6A01G131600 chrUn 91.379 58 4 1 3415 3472 115400252 115400308 1.670000e-10 78.7
34 TraesCS6A01G131600 chr7D 91.379 58 2 2 3423 3478 459786388 459786332 6.020000e-10 76.8
35 TraesCS6A01G131600 chr3D 87.500 56 7 0 3403 3458 609983800 609983855 1.300000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G131600 chr6A 104047882 104053488 5606 False 10355.00 10355 100.00000 1 5607 1 chr6A.!!$F1 5606
1 TraesCS6A01G131600 chr6D 86542391 86547897 5506 False 1876.00 3592 91.54825 1 5607 4 chr6D.!!$F4 5606
2 TraesCS6A01G131600 chr6B 163965239 163970023 4784 False 1555.25 2037 90.44500 795 5552 4 chr6B.!!$F1 4757

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
772 1130 0.031585 CCACACTTTCTCGACACCGA 59.968 55.000 0.00 0.00 43.35 4.69 F
2045 2455 1.067846 TCTTTCATGAGACGTCGTGGG 60.068 52.381 10.46 1.92 39.81 4.61 F
2250 2737 1.705337 GCGGCACATGCTCGTTATGT 61.705 55.000 13.64 0.00 41.70 2.29 F
3147 3642 1.956477 CTGGGTAATAACATGGCTGGC 59.044 52.381 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2190 2675 1.077663 AGTTGGGGAAATGATGCAGGT 59.922 47.619 0.00 0.00 0.00 4.00 R
3786 4323 0.180171 CACAGGACAACCACAGGACA 59.820 55.000 0.00 0.00 38.94 4.02 R
3787 4324 0.535102 CCACAGGACAACCACAGGAC 60.535 60.000 0.00 0.00 38.94 3.85 R
4990 5540 0.301687 GTGTCTGTTCAGTGCACGTG 59.698 55.000 12.28 12.28 0.00 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 9.715121 AAAATGTTTGATAGCTGAATGTTTGAT 57.285 25.926 0.00 0.00 0.00 2.57
74 75 7.475015 TGTTTGATAGCTGAATGTTTGATAGC 58.525 34.615 0.00 0.00 34.71 2.97
75 76 7.337689 TGTTTGATAGCTGAATGTTTGATAGCT 59.662 33.333 0.00 0.00 45.74 3.32
76 77 6.856135 TGATAGCTGAATGTTTGATAGCTG 57.144 37.500 7.26 0.00 43.87 4.24
77 78 6.585416 TGATAGCTGAATGTTTGATAGCTGA 58.415 36.000 7.26 0.00 43.87 4.26
78 79 7.049754 TGATAGCTGAATGTTTGATAGCTGAA 58.950 34.615 7.26 0.00 43.87 3.02
89 90 8.939201 TGTTTGATAGCTGAAAAATGACAAAA 57.061 26.923 0.00 0.00 0.00 2.44
114 115 3.194116 TCAGGGCACTAGTTTTACGGTAG 59.806 47.826 0.00 0.00 0.00 3.18
117 118 4.468868 AGGGCACTAGTTTTACGGTAGAAT 59.531 41.667 0.00 0.00 0.00 2.40
121 122 7.019418 GGCACTAGTTTTACGGTAGAATTTTG 58.981 38.462 0.00 0.00 0.00 2.44
127 128 7.774134 AGTTTTACGGTAGAATTTTGTTTGGT 58.226 30.769 0.00 0.00 0.00 3.67
131 132 3.057104 CGGTAGAATTTTGTTTGGTCCCC 60.057 47.826 0.00 0.00 0.00 4.81
153 154 3.778954 AATACCTTATCTCTGCTGCCC 57.221 47.619 0.00 0.00 0.00 5.36
156 157 2.764269 ACCTTATCTCTGCTGCCCTAA 58.236 47.619 0.00 0.00 0.00 2.69
189 193 3.855689 GCATTGGCTTGTACATCAACT 57.144 42.857 0.00 0.00 36.96 3.16
190 194 4.963276 GCATTGGCTTGTACATCAACTA 57.037 40.909 0.00 0.00 36.96 2.24
211 569 6.294473 ACTATTGGAGATGCTCTAACATTGG 58.706 40.000 0.00 0.00 34.03 3.16
244 602 6.105397 TCCTAACTTCTTTTCCTCGCTAAA 57.895 37.500 0.00 0.00 0.00 1.85
245 603 6.164176 TCCTAACTTCTTTTCCTCGCTAAAG 58.836 40.000 0.00 0.00 33.65 1.85
246 604 6.014840 TCCTAACTTCTTTTCCTCGCTAAAGA 60.015 38.462 0.00 0.00 38.30 2.52
247 605 6.819146 CCTAACTTCTTTTCCTCGCTAAAGAT 59.181 38.462 0.00 0.00 39.40 2.40
260 618 3.846360 GCTAAAGATACGGGCGATATGT 58.154 45.455 0.00 0.00 0.00 2.29
328 686 8.387190 TGATAAAATCTATCATGAGCAACCAG 57.613 34.615 0.09 0.00 0.00 4.00
335 693 2.629498 ATGAGCAACCAGGGCCCAT 61.629 57.895 27.56 5.85 0.00 4.00
351 709 1.279846 CCCATCATTTTTGCTGGCCTT 59.720 47.619 3.32 0.00 0.00 4.35
355 713 1.348366 TCATTTTTGCTGGCCTTGCAT 59.652 42.857 21.16 6.99 40.34 3.96
387 745 6.817140 GGGATGTATTTTATCGTCTGGATACC 59.183 42.308 0.00 0.00 37.35 2.73
388 746 7.310485 GGGATGTATTTTATCGTCTGGATACCT 60.310 40.741 0.00 0.00 37.35 3.08
389 747 8.095169 GGATGTATTTTATCGTCTGGATACCTT 58.905 37.037 0.00 0.00 37.35 3.50
402 760 4.651778 TGGATACCTTTGCATATGCTACC 58.348 43.478 27.13 16.12 42.66 3.18
424 782 3.445096 CAGAATTGATGGGTCCCAAACTC 59.555 47.826 16.55 9.00 36.95 3.01
425 783 3.334881 AGAATTGATGGGTCCCAAACTCT 59.665 43.478 16.55 7.62 36.95 3.24
426 784 3.833559 ATTGATGGGTCCCAAACTCTT 57.166 42.857 16.55 0.00 36.95 2.85
427 785 2.879103 TGATGGGTCCCAAACTCTTC 57.121 50.000 16.55 7.38 36.95 2.87
428 786 2.348472 TGATGGGTCCCAAACTCTTCT 58.652 47.619 16.55 0.00 36.95 2.85
429 787 2.716424 TGATGGGTCCCAAACTCTTCTT 59.284 45.455 16.55 0.00 36.95 2.52
430 788 3.140144 TGATGGGTCCCAAACTCTTCTTT 59.860 43.478 16.55 0.00 36.95 2.52
431 789 3.680777 TGGGTCCCAAACTCTTCTTTT 57.319 42.857 8.65 0.00 0.00 2.27
432 790 3.989056 TGGGTCCCAAACTCTTCTTTTT 58.011 40.909 8.65 0.00 0.00 1.94
433 791 3.958147 TGGGTCCCAAACTCTTCTTTTTC 59.042 43.478 8.65 0.00 0.00 2.29
434 792 4.215908 GGGTCCCAAACTCTTCTTTTTCT 58.784 43.478 1.78 0.00 0.00 2.52
435 793 4.649674 GGGTCCCAAACTCTTCTTTTTCTT 59.350 41.667 1.78 0.00 0.00 2.52
436 794 5.128827 GGGTCCCAAACTCTTCTTTTTCTTT 59.871 40.000 1.78 0.00 0.00 2.52
437 795 6.351881 GGGTCCCAAACTCTTCTTTTTCTTTT 60.352 38.462 1.78 0.00 0.00 2.27
438 796 6.535150 GGTCCCAAACTCTTCTTTTTCTTTTG 59.465 38.462 0.00 0.00 0.00 2.44
439 797 7.320399 GTCCCAAACTCTTCTTTTTCTTTTGA 58.680 34.615 0.00 0.00 0.00 2.69
440 798 7.817478 GTCCCAAACTCTTCTTTTTCTTTTGAA 59.183 33.333 0.00 0.00 36.52 2.69
441 799 7.817478 TCCCAAACTCTTCTTTTTCTTTTGAAC 59.183 33.333 0.00 0.00 38.30 3.18
442 800 7.602265 CCCAAACTCTTCTTTTTCTTTTGAACA 59.398 33.333 0.00 0.00 38.30 3.18
443 801 9.154847 CCAAACTCTTCTTTTTCTTTTGAACAT 57.845 29.630 0.00 0.00 38.30 2.71
444 802 9.962759 CAAACTCTTCTTTTTCTTTTGAACATG 57.037 29.630 0.00 0.00 38.30 3.21
445 803 8.707938 AACTCTTCTTTTTCTTTTGAACATGG 57.292 30.769 0.00 0.00 38.30 3.66
446 804 7.840931 ACTCTTCTTTTTCTTTTGAACATGGT 58.159 30.769 0.00 0.00 38.30 3.55
447 805 8.966868 ACTCTTCTTTTTCTTTTGAACATGGTA 58.033 29.630 0.00 0.00 38.30 3.25
448 806 9.237846 CTCTTCTTTTTCTTTTGAACATGGTAC 57.762 33.333 0.00 0.00 38.30 3.34
449 807 8.744652 TCTTCTTTTTCTTTTGAACATGGTACA 58.255 29.630 0.00 0.00 40.14 2.90
450 808 8.925161 TTCTTTTTCTTTTGAACATGGTACAG 57.075 30.769 0.00 0.00 39.40 2.74
451 809 8.287439 TCTTTTTCTTTTGAACATGGTACAGA 57.713 30.769 0.00 0.00 39.40 3.41
452 810 8.188139 TCTTTTTCTTTTGAACATGGTACAGAC 58.812 33.333 0.00 0.00 39.40 3.51
453 811 5.666969 TTCTTTTGAACATGGTACAGACG 57.333 39.130 0.00 0.00 35.76 4.18
454 812 5.120399 TTCTTTTGAACATGGTACAGACGT 58.880 37.500 0.00 0.00 35.76 4.34
455 813 6.282167 TTCTTTTGAACATGGTACAGACGTA 58.718 36.000 0.00 0.00 35.76 3.57
456 814 6.762187 TTCTTTTGAACATGGTACAGACGTAA 59.238 34.615 0.00 0.00 35.76 3.18
457 815 7.042321 TTCTTTTGAACATGGTACAGACGTAAG 60.042 37.037 0.00 0.00 35.76 2.34
460 818 4.874534 TGGTACAGACGTAAGCGC 57.125 55.556 0.00 0.00 42.83 5.92
461 819 2.260247 TGGTACAGACGTAAGCGCT 58.740 52.632 2.64 2.64 42.83 5.92
462 820 0.169672 TGGTACAGACGTAAGCGCTC 59.830 55.000 12.06 0.00 42.83 5.03
463 821 0.169672 GGTACAGACGTAAGCGCTCA 59.830 55.000 12.06 0.00 42.83 4.26
464 822 1.202268 GGTACAGACGTAAGCGCTCAT 60.202 52.381 12.06 0.00 42.83 2.90
465 823 2.032550 GGTACAGACGTAAGCGCTCATA 59.967 50.000 12.06 0.00 42.83 2.15
466 824 3.304525 GGTACAGACGTAAGCGCTCATAT 60.305 47.826 12.06 0.00 42.83 1.78
467 825 4.083643 GGTACAGACGTAAGCGCTCATATA 60.084 45.833 12.06 0.00 42.83 0.86
468 826 4.768130 ACAGACGTAAGCGCTCATATAT 57.232 40.909 12.06 0.00 42.83 0.86
469 827 5.874895 ACAGACGTAAGCGCTCATATATA 57.125 39.130 12.06 0.00 42.83 0.86
470 828 6.438259 ACAGACGTAAGCGCTCATATATAT 57.562 37.500 12.06 0.00 42.83 0.86
471 829 7.549615 ACAGACGTAAGCGCTCATATATATA 57.450 36.000 12.06 0.00 42.83 0.86
472 830 7.408123 ACAGACGTAAGCGCTCATATATATAC 58.592 38.462 12.06 5.92 42.83 1.47
473 831 6.570423 CAGACGTAAGCGCTCATATATATACG 59.430 42.308 24.46 24.46 42.83 3.06
474 832 5.203370 ACGTAAGCGCTCATATATATACGC 58.797 41.667 25.46 20.71 46.20 4.42
480 838 6.363968 GCGCTCATATATATACGCATACAC 57.636 41.667 22.22 2.67 45.25 2.90
481 839 6.143496 GCGCTCATATATATACGCATACACT 58.857 40.000 22.22 0.00 45.25 3.55
482 840 6.637254 GCGCTCATATATATACGCATACACTT 59.363 38.462 22.22 0.00 45.25 3.16
483 841 7.801783 GCGCTCATATATATACGCATACACTTA 59.198 37.037 22.22 0.00 45.25 2.24
484 842 9.827411 CGCTCATATATATACGCATACACTTAT 57.173 33.333 12.98 0.00 0.00 1.73
490 848 6.852420 ATATACGCATACACTTATCCCTGT 57.148 37.500 0.00 0.00 0.00 4.00
491 849 3.179443 ACGCATACACTTATCCCTGTG 57.821 47.619 0.00 0.00 39.80 3.66
492 850 2.764010 ACGCATACACTTATCCCTGTGA 59.236 45.455 0.00 0.00 37.59 3.58
493 851 3.196901 ACGCATACACTTATCCCTGTGAA 59.803 43.478 0.00 0.00 37.59 3.18
494 852 3.555956 CGCATACACTTATCCCTGTGAAC 59.444 47.826 0.00 0.00 37.59 3.18
495 853 3.555956 GCATACACTTATCCCTGTGAACG 59.444 47.826 0.00 0.00 37.59 3.95
496 854 4.755411 CATACACTTATCCCTGTGAACGT 58.245 43.478 0.00 0.00 37.59 3.99
497 855 5.680408 GCATACACTTATCCCTGTGAACGTA 60.680 44.000 0.00 0.00 37.59 3.57
498 856 4.184079 ACACTTATCCCTGTGAACGTAC 57.816 45.455 0.00 0.00 37.59 3.67
499 857 3.575256 ACACTTATCCCTGTGAACGTACA 59.425 43.478 0.00 0.00 37.59 2.90
500 858 4.222145 ACACTTATCCCTGTGAACGTACAT 59.778 41.667 0.00 0.00 37.59 2.29
501 859 5.419788 ACACTTATCCCTGTGAACGTACATA 59.580 40.000 0.00 0.00 37.59 2.29
502 860 5.747197 CACTTATCCCTGTGAACGTACATAC 59.253 44.000 0.00 0.00 36.38 2.39
503 861 7.433428 CACTTATCCCTGTGAACGTACATACG 61.433 46.154 9.82 9.82 44.14 3.06
514 872 3.207474 CGTACATACGCATACCCTACC 57.793 52.381 0.00 0.00 43.14 3.18
515 873 2.095059 CGTACATACGCATACCCTACCC 60.095 54.545 0.00 0.00 43.14 3.69
516 874 1.345063 ACATACGCATACCCTACCCC 58.655 55.000 0.00 0.00 0.00 4.95
517 875 1.132945 ACATACGCATACCCTACCCCT 60.133 52.381 0.00 0.00 0.00 4.79
518 876 2.110543 ACATACGCATACCCTACCCCTA 59.889 50.000 0.00 0.00 0.00 3.53
519 877 3.245875 ACATACGCATACCCTACCCCTAT 60.246 47.826 0.00 0.00 0.00 2.57
520 878 1.640917 ACGCATACCCTACCCCTATG 58.359 55.000 0.00 0.00 0.00 2.23
521 879 1.148446 ACGCATACCCTACCCCTATGA 59.852 52.381 0.00 0.00 0.00 2.15
522 880 1.825474 CGCATACCCTACCCCTATGAG 59.175 57.143 0.00 0.00 0.00 2.90
523 881 1.555533 GCATACCCTACCCCTATGAGC 59.444 57.143 0.00 0.00 0.00 4.26
524 882 2.902608 CATACCCTACCCCTATGAGCA 58.097 52.381 0.00 0.00 0.00 4.26
525 883 3.454858 CATACCCTACCCCTATGAGCAT 58.545 50.000 0.00 0.00 0.00 3.79
526 884 2.031495 ACCCTACCCCTATGAGCATC 57.969 55.000 0.00 0.00 0.00 3.91
527 885 1.509961 ACCCTACCCCTATGAGCATCT 59.490 52.381 0.00 0.00 34.92 2.90
528 886 2.089925 ACCCTACCCCTATGAGCATCTT 60.090 50.000 0.00 0.00 34.92 2.40
529 887 2.982488 CCCTACCCCTATGAGCATCTTT 59.018 50.000 0.00 0.00 34.92 2.52
530 888 4.168101 CCCTACCCCTATGAGCATCTTTA 58.832 47.826 0.00 0.00 34.92 1.85
531 889 4.597507 CCCTACCCCTATGAGCATCTTTAA 59.402 45.833 0.00 0.00 34.92 1.52
532 890 5.251700 CCCTACCCCTATGAGCATCTTTAAT 59.748 44.000 0.00 0.00 34.92 1.40
533 891 6.443849 CCCTACCCCTATGAGCATCTTTAATA 59.556 42.308 0.00 0.00 34.92 0.98
534 892 7.037586 CCCTACCCCTATGAGCATCTTTAATAA 60.038 40.741 0.00 0.00 34.92 1.40
535 893 8.383175 CCTACCCCTATGAGCATCTTTAATAAA 58.617 37.037 0.00 0.00 34.92 1.40
536 894 9.220767 CTACCCCTATGAGCATCTTTAATAAAC 57.779 37.037 0.00 0.00 34.92 2.01
537 895 7.816411 ACCCCTATGAGCATCTTTAATAAACT 58.184 34.615 0.00 0.00 34.92 2.66
538 896 7.721399 ACCCCTATGAGCATCTTTAATAAACTG 59.279 37.037 0.00 0.00 34.92 3.16
539 897 7.939039 CCCCTATGAGCATCTTTAATAAACTGA 59.061 37.037 0.00 0.00 34.92 3.41
540 898 9.342308 CCCTATGAGCATCTTTAATAAACTGAA 57.658 33.333 0.00 0.00 34.92 3.02
543 901 7.072177 TGAGCATCTTTAATAAACTGAACCG 57.928 36.000 0.00 0.00 34.92 4.44
544 902 6.093495 TGAGCATCTTTAATAAACTGAACCGG 59.907 38.462 0.00 0.00 34.92 5.28
545 903 5.944007 AGCATCTTTAATAAACTGAACCGGT 59.056 36.000 0.00 0.00 0.00 5.28
546 904 7.107542 AGCATCTTTAATAAACTGAACCGGTA 58.892 34.615 8.00 0.00 0.00 4.02
547 905 7.773690 AGCATCTTTAATAAACTGAACCGGTAT 59.226 33.333 8.00 0.00 0.00 2.73
548 906 9.048446 GCATCTTTAATAAACTGAACCGGTATA 57.952 33.333 8.00 0.00 0.00 1.47
556 914 8.833231 ATAAACTGAACCGGTATATCATCTTG 57.167 34.615 8.00 0.00 0.00 3.02
557 915 6.479972 AACTGAACCGGTATATCATCTTGA 57.520 37.500 8.00 0.00 0.00 3.02
558 916 6.090483 ACTGAACCGGTATATCATCTTGAG 57.910 41.667 8.00 0.00 0.00 3.02
559 917 5.833667 ACTGAACCGGTATATCATCTTGAGA 59.166 40.000 8.00 0.00 0.00 3.27
560 918 6.495181 ACTGAACCGGTATATCATCTTGAGAT 59.505 38.462 8.00 0.00 32.49 2.75
561 919 7.015682 ACTGAACCGGTATATCATCTTGAGATT 59.984 37.037 8.00 0.00 30.15 2.40
562 920 7.735917 TGAACCGGTATATCATCTTGAGATTT 58.264 34.615 8.00 0.00 30.15 2.17
563 921 8.866093 TGAACCGGTATATCATCTTGAGATTTA 58.134 33.333 8.00 0.00 30.15 1.40
564 922 9.141400 GAACCGGTATATCATCTTGAGATTTAC 57.859 37.037 8.00 0.00 30.15 2.01
565 923 7.313646 ACCGGTATATCATCTTGAGATTTACG 58.686 38.462 4.49 0.00 33.48 3.18
566 924 7.176165 ACCGGTATATCATCTTGAGATTTACGA 59.824 37.037 4.49 0.00 33.48 3.43
567 925 8.027189 CCGGTATATCATCTTGAGATTTACGAA 58.973 37.037 0.00 0.00 33.48 3.85
568 926 9.066939 CGGTATATCATCTTGAGATTTACGAAG 57.933 37.037 0.00 0.00 33.48 3.79
569 927 9.915629 GGTATATCATCTTGAGATTTACGAAGT 57.084 33.333 0.00 0.00 35.43 3.01
573 931 7.993821 TCATCTTGAGATTTACGAAGTCATC 57.006 36.000 0.00 0.00 35.39 2.92
574 932 7.547227 TCATCTTGAGATTTACGAAGTCATCA 58.453 34.615 0.00 0.00 35.39 3.07
575 933 8.200120 TCATCTTGAGATTTACGAAGTCATCAT 58.800 33.333 0.00 0.00 35.39 2.45
576 934 9.468532 CATCTTGAGATTTACGAAGTCATCATA 57.531 33.333 0.00 0.00 35.39 2.15
577 935 9.689976 ATCTTGAGATTTACGAAGTCATCATAG 57.310 33.333 0.00 0.00 43.93 2.23
578 936 8.903820 TCTTGAGATTTACGAAGTCATCATAGA 58.096 33.333 0.00 0.00 43.93 1.98
579 937 9.689976 CTTGAGATTTACGAAGTCATCATAGAT 57.310 33.333 0.00 0.00 43.93 1.98
580 938 9.468532 TTGAGATTTACGAAGTCATCATAGATG 57.531 33.333 0.62 0.62 43.93 2.90
581 939 7.596621 TGAGATTTACGAAGTCATCATAGATGC 59.403 37.037 2.19 0.00 43.93 3.91
582 940 6.870965 AGATTTACGAAGTCATCATAGATGCC 59.129 38.462 2.19 0.00 43.93 4.40
583 941 5.791336 TTACGAAGTCATCATAGATGCCT 57.209 39.130 2.19 0.00 43.93 4.75
584 942 4.250116 ACGAAGTCATCATAGATGCCTC 57.750 45.455 2.19 0.00 29.74 4.70
585 943 3.240884 CGAAGTCATCATAGATGCCTCG 58.759 50.000 2.19 6.50 0.00 4.63
586 944 3.304996 CGAAGTCATCATAGATGCCTCGT 60.305 47.826 2.19 0.00 0.00 4.18
587 945 3.932545 AGTCATCATAGATGCCTCGTC 57.067 47.619 2.19 0.00 0.00 4.20
588 946 2.227626 AGTCATCATAGATGCCTCGTCG 59.772 50.000 2.19 0.00 0.00 5.12
589 947 1.068264 TCATCATAGATGCCTCGTCGC 60.068 52.381 2.19 0.00 0.00 5.19
590 948 0.244994 ATCATAGATGCCTCGTCGCC 59.755 55.000 0.00 0.00 0.00 5.54
591 949 1.730902 CATAGATGCCTCGTCGCCG 60.731 63.158 0.00 0.00 0.00 6.46
592 950 1.897137 ATAGATGCCTCGTCGCCGA 60.897 57.895 0.00 0.00 41.73 5.54
593 951 2.131294 ATAGATGCCTCGTCGCCGAC 62.131 60.000 7.29 7.29 38.40 4.79
604 962 2.851104 CGCCGACGAAAACACCTC 59.149 61.111 0.00 0.00 43.93 3.85
605 963 2.664436 CGCCGACGAAAACACCTCC 61.664 63.158 0.00 0.00 43.93 4.30
606 964 1.301479 GCCGACGAAAACACCTCCT 60.301 57.895 0.00 0.00 0.00 3.69
607 965 0.883370 GCCGACGAAAACACCTCCTT 60.883 55.000 0.00 0.00 0.00 3.36
608 966 1.145803 CCGACGAAAACACCTCCTTC 58.854 55.000 0.00 0.00 0.00 3.46
609 967 1.145803 CGACGAAAACACCTCCTTCC 58.854 55.000 0.00 0.00 0.00 3.46
610 968 1.539496 CGACGAAAACACCTCCTTCCA 60.539 52.381 0.00 0.00 0.00 3.53
611 969 1.871676 GACGAAAACACCTCCTTCCAC 59.128 52.381 0.00 0.00 0.00 4.02
612 970 1.235724 CGAAAACACCTCCTTCCACC 58.764 55.000 0.00 0.00 0.00 4.61
613 971 1.235724 GAAAACACCTCCTTCCACCG 58.764 55.000 0.00 0.00 0.00 4.94
614 972 0.841289 AAAACACCTCCTTCCACCGA 59.159 50.000 0.00 0.00 0.00 4.69
615 973 0.841289 AAACACCTCCTTCCACCGAA 59.159 50.000 0.00 0.00 0.00 4.30
616 974 0.841289 AACACCTCCTTCCACCGAAA 59.159 50.000 0.00 0.00 0.00 3.46
617 975 0.396811 ACACCTCCTTCCACCGAAAG 59.603 55.000 0.00 0.00 0.00 2.62
618 976 0.955919 CACCTCCTTCCACCGAAAGC 60.956 60.000 0.00 0.00 0.00 3.51
619 977 1.374947 CCTCCTTCCACCGAAAGCA 59.625 57.895 0.00 0.00 0.00 3.91
620 978 0.250727 CCTCCTTCCACCGAAAGCAA 60.251 55.000 0.00 0.00 0.00 3.91
621 979 1.604604 CTCCTTCCACCGAAAGCAAA 58.395 50.000 0.00 0.00 0.00 3.68
622 980 2.162681 CTCCTTCCACCGAAAGCAAAT 58.837 47.619 0.00 0.00 0.00 2.32
623 981 2.159382 TCCTTCCACCGAAAGCAAATC 58.841 47.619 0.00 0.00 0.00 2.17
624 982 1.885887 CCTTCCACCGAAAGCAAATCA 59.114 47.619 0.00 0.00 0.00 2.57
625 983 2.493278 CCTTCCACCGAAAGCAAATCAT 59.507 45.455 0.00 0.00 0.00 2.45
626 984 3.428045 CCTTCCACCGAAAGCAAATCATC 60.428 47.826 0.00 0.00 0.00 2.92
627 985 1.737236 TCCACCGAAAGCAAATCATCG 59.263 47.619 0.00 0.00 35.19 3.84
628 986 1.737236 CCACCGAAAGCAAATCATCGA 59.263 47.619 0.00 0.00 37.48 3.59
629 987 2.161410 CCACCGAAAGCAAATCATCGAA 59.839 45.455 0.00 0.00 37.48 3.71
630 988 3.365868 CCACCGAAAGCAAATCATCGAAA 60.366 43.478 0.00 0.00 37.48 3.46
631 989 4.225984 CACCGAAAGCAAATCATCGAAAA 58.774 39.130 0.00 0.00 37.48 2.29
632 990 4.858692 CACCGAAAGCAAATCATCGAAAAT 59.141 37.500 0.00 0.00 37.48 1.82
633 991 5.003778 CACCGAAAGCAAATCATCGAAAATC 59.996 40.000 0.00 0.00 37.48 2.17
634 992 5.094812 CCGAAAGCAAATCATCGAAAATCA 58.905 37.500 0.00 0.00 37.48 2.57
635 993 5.745294 CCGAAAGCAAATCATCGAAAATCAT 59.255 36.000 0.00 0.00 37.48 2.45
636 994 6.291427 CCGAAAGCAAATCATCGAAAATCATG 60.291 38.462 0.00 0.00 37.48 3.07
637 995 6.469915 CGAAAGCAAATCATCGAAAATCATGA 59.530 34.615 0.00 0.00 37.48 3.07
638 996 7.008538 CGAAAGCAAATCATCGAAAATCATGAA 59.991 33.333 0.00 0.00 37.48 2.57
639 997 8.537049 AAAGCAAATCATCGAAAATCATGAAA 57.463 26.923 0.00 0.00 32.76 2.69
640 998 8.712285 AAGCAAATCATCGAAAATCATGAAAT 57.288 26.923 0.00 0.00 32.76 2.17
641 999 9.806203 AAGCAAATCATCGAAAATCATGAAATA 57.194 25.926 0.00 0.00 32.76 1.40
642 1000 9.806203 AGCAAATCATCGAAAATCATGAAATAA 57.194 25.926 0.00 0.00 32.76 1.40
666 1024 8.623310 AAATTTAAAAATAATACGAGCACCGG 57.377 30.769 0.00 0.00 43.93 5.28
667 1025 5.738118 TTAAAAATAATACGAGCACCGGG 57.262 39.130 6.32 0.00 43.93 5.73
668 1026 3.547054 AAAATAATACGAGCACCGGGA 57.453 42.857 6.32 0.00 43.93 5.14
669 1027 2.521105 AATAATACGAGCACCGGGAC 57.479 50.000 6.32 0.00 43.93 4.46
670 1028 1.700955 ATAATACGAGCACCGGGACT 58.299 50.000 6.32 1.15 43.93 3.85
671 1029 1.477553 TAATACGAGCACCGGGACTT 58.522 50.000 6.32 0.00 43.93 3.01
672 1030 0.108329 AATACGAGCACCGGGACTTG 60.108 55.000 6.32 9.15 43.93 3.16
673 1031 0.968901 ATACGAGCACCGGGACTTGA 60.969 55.000 17.58 4.64 43.93 3.02
674 1032 1.180456 TACGAGCACCGGGACTTGAA 61.180 55.000 17.58 0.00 43.93 2.69
675 1033 1.079127 CGAGCACCGGGACTTGAAT 60.079 57.895 6.32 0.00 33.91 2.57
676 1034 0.673644 CGAGCACCGGGACTTGAATT 60.674 55.000 6.32 0.00 33.91 2.17
677 1035 0.804989 GAGCACCGGGACTTGAATTG 59.195 55.000 6.32 0.00 0.00 2.32
678 1036 0.400213 AGCACCGGGACTTGAATTGA 59.600 50.000 6.32 0.00 0.00 2.57
679 1037 1.004745 AGCACCGGGACTTGAATTGAT 59.995 47.619 6.32 0.00 0.00 2.57
680 1038 1.818674 GCACCGGGACTTGAATTGATT 59.181 47.619 6.32 0.00 0.00 2.57
681 1039 2.415893 GCACCGGGACTTGAATTGATTG 60.416 50.000 6.32 0.00 0.00 2.67
682 1040 2.164219 CACCGGGACTTGAATTGATTGG 59.836 50.000 6.32 0.00 0.00 3.16
683 1041 2.225017 ACCGGGACTTGAATTGATTGGT 60.225 45.455 6.32 0.00 0.00 3.67
684 1042 2.423538 CCGGGACTTGAATTGATTGGTC 59.576 50.000 0.00 0.00 0.00 4.02
685 1043 2.423538 CGGGACTTGAATTGATTGGTCC 59.576 50.000 0.00 0.00 41.50 4.46
687 1045 3.430453 GGACTTGAATTGATTGGTCCCA 58.570 45.455 0.00 0.00 37.75 4.37
688 1046 3.193479 GGACTTGAATTGATTGGTCCCAC 59.807 47.826 0.00 0.00 37.75 4.61
689 1047 3.826157 GACTTGAATTGATTGGTCCCACA 59.174 43.478 0.00 0.00 0.00 4.17
690 1048 3.573967 ACTTGAATTGATTGGTCCCACAC 59.426 43.478 0.00 0.00 0.00 3.82
691 1049 3.524095 TGAATTGATTGGTCCCACACT 57.476 42.857 0.00 0.00 0.00 3.55
692 1050 3.420893 TGAATTGATTGGTCCCACACTC 58.579 45.455 0.00 0.00 0.00 3.51
693 1051 3.074390 TGAATTGATTGGTCCCACACTCT 59.926 43.478 0.00 0.00 0.00 3.24
694 1052 3.814504 ATTGATTGGTCCCACACTCTT 57.185 42.857 0.00 0.00 0.00 2.85
695 1053 2.859165 TGATTGGTCCCACACTCTTC 57.141 50.000 0.00 0.00 0.00 2.87
696 1054 2.338809 TGATTGGTCCCACACTCTTCT 58.661 47.619 0.00 0.00 0.00 2.85
697 1055 2.038952 TGATTGGTCCCACACTCTTCTG 59.961 50.000 0.00 0.00 0.00 3.02
698 1056 0.108585 TTGGTCCCACACTCTTCTGC 59.891 55.000 0.00 0.00 0.00 4.26
699 1057 1.374758 GGTCCCACACTCTTCTGCG 60.375 63.158 0.00 0.00 0.00 5.18
700 1058 1.666011 GTCCCACACTCTTCTGCGA 59.334 57.895 0.00 0.00 0.00 5.10
701 1059 0.667792 GTCCCACACTCTTCTGCGAC 60.668 60.000 0.00 0.00 0.00 5.19
702 1060 1.734477 CCCACACTCTTCTGCGACG 60.734 63.158 0.00 0.00 0.00 5.12
706 1064 0.317938 ACACTCTTCTGCGACGTGAC 60.318 55.000 0.00 0.00 0.00 3.67
742 1100 4.175489 ACGTGGGTCGCGATCTCG 62.175 66.667 25.90 25.90 44.19 4.04
762 1120 0.594602 GGCCGTAAACCCACACTTTC 59.405 55.000 0.00 0.00 0.00 2.62
763 1121 1.601166 GCCGTAAACCCACACTTTCT 58.399 50.000 0.00 0.00 0.00 2.52
764 1122 1.534163 GCCGTAAACCCACACTTTCTC 59.466 52.381 0.00 0.00 0.00 2.87
765 1123 1.796459 CCGTAAACCCACACTTTCTCG 59.204 52.381 0.00 0.00 0.00 4.04
766 1124 2.546373 CCGTAAACCCACACTTTCTCGA 60.546 50.000 0.00 0.00 0.00 4.04
767 1125 2.473984 CGTAAACCCACACTTTCTCGAC 59.526 50.000 0.00 0.00 0.00 4.20
768 1126 2.702592 AAACCCACACTTTCTCGACA 57.297 45.000 0.00 0.00 0.00 4.35
769 1127 1.949465 AACCCACACTTTCTCGACAC 58.051 50.000 0.00 0.00 0.00 3.67
770 1128 0.106149 ACCCACACTTTCTCGACACC 59.894 55.000 0.00 0.00 0.00 4.16
772 1130 0.031585 CCACACTTTCTCGACACCGA 59.968 55.000 0.00 0.00 43.35 4.69
780 1138 3.228017 TCGACACCGAGTTGGCCA 61.228 61.111 0.00 0.00 43.94 5.36
843 1223 3.589579 GCATCCGTCAATGCCACA 58.410 55.556 3.92 0.00 45.07 4.17
844 1224 1.430632 GCATCCGTCAATGCCACAG 59.569 57.895 3.92 0.00 45.07 3.66
926 1309 6.681729 AATCCCCTAATTAATCAGCTCGTA 57.318 37.500 0.00 0.00 0.00 3.43
937 1321 2.182030 GCTCGTAGCGCACTTCCT 59.818 61.111 11.47 0.00 38.59 3.36
939 1323 1.226717 CTCGTAGCGCACTTCCTCC 60.227 63.158 11.47 0.00 0.00 4.30
944 1328 2.474816 GTAGCGCACTTCCTCCATTAG 58.525 52.381 11.47 0.00 0.00 1.73
982 1379 2.351888 GCGCAAACGACACACACC 60.352 61.111 0.30 0.00 43.93 4.16
984 1381 2.326550 GCAAACGACACACACCCG 59.673 61.111 0.00 0.00 0.00 5.28
985 1382 2.326550 CAAACGACACACACCCGC 59.673 61.111 0.00 0.00 0.00 6.13
986 1383 2.125065 AAACGACACACACCCGCA 60.125 55.556 0.00 0.00 0.00 5.69
987 1384 2.466140 AAACGACACACACCCGCAC 61.466 57.895 0.00 0.00 0.00 5.34
988 1385 3.667326 AACGACACACACCCGCACA 62.667 57.895 0.00 0.00 0.00 4.57
1036 1433 1.446791 GCAGAGAGAGCCCATCCTG 59.553 63.158 0.00 0.00 0.00 3.86
1044 1441 3.883549 GCCCATCCTGCTCCTCCC 61.884 72.222 0.00 0.00 0.00 4.30
1862 2272 9.868277 GACATCGGATCTAAAATCAGATCTTAT 57.132 33.333 11.69 0.00 46.81 1.73
1895 2305 5.559427 ATTTGTACTTGATGCATTGCGTA 57.441 34.783 0.00 0.00 0.00 4.42
1922 2332 5.656859 GGTGGCCTTCTTTGTATAATTTCCT 59.343 40.000 3.32 0.00 0.00 3.36
1940 2350 2.976185 TCCTCAGGTGAAATGGTGTACA 59.024 45.455 0.00 0.00 0.00 2.90
1950 2360 4.873259 TGAAATGGTGTACACATGATACGG 59.127 41.667 26.51 0.00 0.00 4.02
1959 2369 4.556942 ACACATGATACGGCATGATTTG 57.443 40.909 18.07 10.62 46.64 2.32
2005 2415 9.665719 ACCAACTTTTTGTTTCTATTTGTGATT 57.334 25.926 0.00 0.00 36.63 2.57
2045 2455 1.067846 TCTTTCATGAGACGTCGTGGG 60.068 52.381 10.46 1.92 39.81 4.61
2077 2487 4.085357 TGTGGTCTGCTGTTGATAAGTT 57.915 40.909 0.00 0.00 0.00 2.66
2078 2488 4.065088 TGTGGTCTGCTGTTGATAAGTTC 58.935 43.478 0.00 0.00 0.00 3.01
2117 2527 4.123497 TGCAACAGCATAGATACTTCGT 57.877 40.909 0.00 0.00 32.31 3.85
2120 2530 6.280643 TGCAACAGCATAGATACTTCGTAAT 58.719 36.000 0.00 0.00 32.31 1.89
2146 2556 4.303086 ACTTGCTTAGATGAATGCATGC 57.697 40.909 11.82 11.82 34.11 4.06
2157 2567 6.097356 AGATGAATGCATGCTTTTACTTGTG 58.903 36.000 20.33 0.00 34.11 3.33
2158 2568 5.199024 TGAATGCATGCTTTTACTTGTGT 57.801 34.783 20.33 0.00 0.00 3.72
2194 2681 9.626045 GTATGGTTAAAAATGAGAGAAAACCTG 57.374 33.333 0.00 0.00 36.65 4.00
2203 2690 5.633830 TGAGAGAAAACCTGCATCATTTC 57.366 39.130 9.14 9.14 33.13 2.17
2250 2737 1.705337 GCGGCACATGCTCGTTATGT 61.705 55.000 13.64 0.00 41.70 2.29
2257 2744 3.840209 CACATGCTCGTTATGTTTTCACG 59.160 43.478 0.00 0.00 36.67 4.35
2261 2748 4.707563 TGCTCGTTATGTTTTCACGATTG 58.292 39.130 0.00 0.00 32.29 2.67
2291 2778 7.966753 CACTATCCATTCAACATCTTGTTTCTG 59.033 37.037 0.00 0.00 38.77 3.02
2319 2807 6.625960 GCTGTTTCTTGTCACCTTCTCTTTTT 60.626 38.462 0.00 0.00 0.00 1.94
2422 2910 7.976135 AAAATACTTTGGCACATATTTTGCA 57.024 28.000 16.07 0.00 38.66 4.08
2431 2919 8.417780 TTGGCACATATTTTGCATAACAATAC 57.582 30.769 8.08 0.00 42.12 1.89
2522 3010 5.994250 AGCAAGCCTACATCATTTTCTCTA 58.006 37.500 0.00 0.00 0.00 2.43
2524 3012 6.317391 AGCAAGCCTACATCATTTTCTCTAAC 59.683 38.462 0.00 0.00 0.00 2.34
2530 3018 8.897752 GCCTACATCATTTTCTCTAACTGATTT 58.102 33.333 0.00 0.00 34.85 2.17
2619 3109 6.493458 AGCACCATGTTGAGTTTTACCTAAAT 59.507 34.615 0.00 0.00 0.00 1.40
2621 3111 7.328493 GCACCATGTTGAGTTTTACCTAAATTC 59.672 37.037 0.00 0.00 34.16 2.17
2622 3112 7.537306 CACCATGTTGAGTTTTACCTAAATTCG 59.463 37.037 0.00 0.00 35.78 3.34
2623 3113 7.229907 ACCATGTTGAGTTTTACCTAAATTCGT 59.770 33.333 0.00 0.00 35.78 3.85
2624 3114 8.723311 CCATGTTGAGTTTTACCTAAATTCGTA 58.277 33.333 0.00 0.00 35.78 3.43
2625 3115 9.537848 CATGTTGAGTTTTACCTAAATTCGTAC 57.462 33.333 0.00 0.00 35.78 3.67
2702 3193 5.769662 ACTTGCATCTTGTAACCATGAGAAA 59.230 36.000 0.00 0.00 0.00 2.52
2706 3197 7.761409 TGCATCTTGTAACCATGAGAAATTAC 58.239 34.615 0.00 0.00 0.00 1.89
2716 3207 8.575649 AACCATGAGAAATTACGTTATCCTTT 57.424 30.769 0.00 0.00 0.00 3.11
3058 3549 7.881775 TGTCTCTGCTCAGTCTTTATGTATA 57.118 36.000 0.00 0.00 0.00 1.47
3059 3550 7.935520 TGTCTCTGCTCAGTCTTTATGTATAG 58.064 38.462 0.00 0.00 0.00 1.31
3147 3642 1.956477 CTGGGTAATAACATGGCTGGC 59.044 52.381 0.00 0.00 0.00 4.85
3251 3746 3.771577 AACCGGTCATGAAAAGAGACT 57.228 42.857 8.04 0.00 32.98 3.24
3269 3764 3.315470 AGACTTTTGTTTCTTTCCTCGCC 59.685 43.478 0.00 0.00 0.00 5.54
3350 3847 8.421673 AAGTGTCTCAACTTTGTACTAACTTC 57.578 34.615 0.00 0.00 37.05 3.01
3351 3848 7.783042 AGTGTCTCAACTTTGTACTAACTTCT 58.217 34.615 0.00 0.00 0.00 2.85
3352 3849 8.258708 AGTGTCTCAACTTTGTACTAACTTCTT 58.741 33.333 0.00 0.00 0.00 2.52
3353 3850 8.880750 GTGTCTCAACTTTGTACTAACTTCTTT 58.119 33.333 0.00 0.00 0.00 2.52
3368 3865 8.989160 CTAACTTCTTTAGTACAAAGTTGTGC 57.011 34.615 6.94 5.58 40.93 4.57
3393 3890 5.453567 AAGTTGAGACACTTATTTTGGGC 57.546 39.130 0.00 0.00 35.10 5.36
3394 3891 4.729868 AGTTGAGACACTTATTTTGGGCT 58.270 39.130 0.00 0.00 0.00 5.19
3399 3896 2.755103 GACACTTATTTTGGGCTGGAGG 59.245 50.000 0.00 0.00 0.00 4.30
3412 3909 2.763448 GGCTGGAGGGAGTATATGCTAG 59.237 54.545 0.00 0.00 0.00 3.42
3413 3910 2.763448 GCTGGAGGGAGTATATGCTAGG 59.237 54.545 0.00 0.00 0.00 3.02
3420 3917 2.559931 GGAGTATATGCTAGGCCCTCCA 60.560 54.545 12.46 2.09 37.53 3.86
3421 3918 2.763448 GAGTATATGCTAGGCCCTCCAG 59.237 54.545 0.00 0.00 33.74 3.86
3433 3930 2.711547 GGCCCTCCAGTCCATAATAAGT 59.288 50.000 0.00 0.00 0.00 2.24
3456 3953 5.006941 GTGTCGCAGTTTTGAACTAAGGTTA 59.993 40.000 0.00 0.00 40.46 2.85
3457 3954 5.235616 TGTCGCAGTTTTGAACTAAGGTTAG 59.764 40.000 0.00 0.00 40.46 2.34
3458 3955 4.753107 TCGCAGTTTTGAACTAAGGTTAGG 59.247 41.667 1.94 0.00 40.46 2.69
3562 4097 7.713942 TGAATATTCTGTCAGTTCATGATGAGG 59.286 37.037 16.24 0.00 40.92 3.86
3567 4102 3.055602 TGTCAGTTCATGATGAGGACTGG 60.056 47.826 20.94 8.18 40.92 4.00
3586 4121 2.629137 TGGCTACCGAGTGTTCTGTTAA 59.371 45.455 0.00 0.00 0.00 2.01
3659 4194 6.655003 TGGTCATTCTAGTTGAATCTTTGGTC 59.345 38.462 0.00 0.00 43.00 4.02
3662 4197 8.447053 GTCATTCTAGTTGAATCTTTGGTCTTC 58.553 37.037 0.00 0.00 43.00 2.87
3670 4205 7.873719 TTGAATCTTTGGTCTTCAACAACTA 57.126 32.000 0.00 0.00 34.80 2.24
3681 4216 6.404293 GGTCTTCAACAACTAAACTTTCTGCA 60.404 38.462 0.00 0.00 0.00 4.41
3723 4258 9.462606 CCACCTAGTAATGTTCCTTATTTTCTT 57.537 33.333 0.00 0.00 0.00 2.52
3771 4308 9.585099 CAGATAGGATCTTGATAGCTCAATAAC 57.415 37.037 0.00 0.00 40.52 1.89
3783 4320 4.194640 AGCTCAATAACGTACTCCTCGTA 58.805 43.478 0.00 0.00 40.69 3.43
3785 4322 5.298777 AGCTCAATAACGTACTCCTCGTAAT 59.701 40.000 0.00 0.00 40.69 1.89
3786 4323 5.975939 GCTCAATAACGTACTCCTCGTAATT 59.024 40.000 0.00 0.00 40.69 1.40
3787 4324 6.074994 GCTCAATAACGTACTCCTCGTAATTG 60.075 42.308 0.00 0.00 40.69 2.32
3788 4325 6.855836 TCAATAACGTACTCCTCGTAATTGT 58.144 36.000 0.00 0.00 40.69 2.71
3789 4326 6.968904 TCAATAACGTACTCCTCGTAATTGTC 59.031 38.462 0.00 0.00 40.69 3.18
3790 4327 3.772060 ACGTACTCCTCGTAATTGTCC 57.228 47.619 0.00 0.00 39.78 4.02
3791 4328 3.350833 ACGTACTCCTCGTAATTGTCCT 58.649 45.455 0.00 0.00 39.78 3.85
3792 4329 3.128242 ACGTACTCCTCGTAATTGTCCTG 59.872 47.826 0.00 0.00 39.78 3.86
3793 4330 3.128242 CGTACTCCTCGTAATTGTCCTGT 59.872 47.826 0.00 0.00 0.00 4.00
3794 4331 3.594603 ACTCCTCGTAATTGTCCTGTG 57.405 47.619 0.00 0.00 0.00 3.66
3795 4332 2.233922 ACTCCTCGTAATTGTCCTGTGG 59.766 50.000 0.00 0.00 0.00 4.17
3951 4488 2.512692 TGCCATTTGCCTGTAGTGAT 57.487 45.000 0.00 0.00 40.16 3.06
4114 4652 2.104451 CTGGCTAGCCACATTCAGATCT 59.896 50.000 32.88 0.00 41.89 2.75
4165 4705 2.100584 TCAAGCGCATTTTGGTCACTTT 59.899 40.909 11.47 0.00 0.00 2.66
4174 4714 7.410407 GCGCATTTTGGTCACTTTATTAAGTTC 60.410 37.037 0.30 0.00 41.85 3.01
4262 4802 9.308000 TCTTGTTATAAAACTGAATCAACCCAT 57.692 29.630 0.00 0.00 36.51 4.00
4376 4916 2.065799 AGGAACCCAAGGACAATCACT 58.934 47.619 0.00 0.00 0.00 3.41
4561 5101 2.828520 TGGTTCTTTGTGGTTCTTTGCA 59.171 40.909 0.00 0.00 0.00 4.08
4701 5245 3.252284 ATCGCCCCATAGCCCCTG 61.252 66.667 0.00 0.00 0.00 4.45
4718 5262 5.005094 GCCCCTGTGTATAGTGTTTTGTTA 58.995 41.667 0.00 0.00 0.00 2.41
4838 5388 4.771684 CAATGGTTGCTGTAGCGC 57.228 55.556 0.00 0.00 45.83 5.92
4844 5394 2.432456 TTGCTGTAGCGCACTCCG 60.432 61.111 11.47 0.00 45.83 4.63
4907 5457 4.082625 GCATCCAGACATTTGAATCACACA 60.083 41.667 0.00 0.00 0.00 3.72
4911 5461 4.276678 CCAGACATTTGAATCACACACAGT 59.723 41.667 0.00 0.00 0.00 3.55
4990 5540 6.870965 AGAATAGACATTCGCCATGAATCTAC 59.129 38.462 0.00 0.00 45.59 2.59
5089 5645 5.420421 TCTGAGAGTTCCCTAGTTTGATCAG 59.580 44.000 0.00 0.00 33.44 2.90
5117 5673 2.297701 ACACAGTTCAACATCCCACAC 58.702 47.619 0.00 0.00 0.00 3.82
5131 5688 1.527034 CCACACCTCCACACATTCAG 58.473 55.000 0.00 0.00 0.00 3.02
5297 5854 1.221635 CCTGGTCCCAACCCATGATA 58.778 55.000 0.00 0.00 45.83 2.15
5601 6164 2.565841 GGAATGCGGTGAAATAGAGCT 58.434 47.619 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.250624 CAAACATTTTAAAGTTTATTCGACCCA 57.749 29.630 5.53 0.00 36.28 4.51
64 65 8.939201 TTTTGTCATTTTTCAGCTATCAAACA 57.061 26.923 0.00 0.00 0.00 2.83
68 69 9.761504 TGAAATTTTGTCATTTTTCAGCTATCA 57.238 25.926 0.00 0.00 34.20 2.15
70 71 9.211485 CCTGAAATTTTGTCATTTTTCAGCTAT 57.789 29.630 18.32 0.00 47.00 2.97
71 72 7.656948 CCCTGAAATTTTGTCATTTTTCAGCTA 59.343 33.333 18.32 0.00 47.00 3.32
72 73 6.484308 CCCTGAAATTTTGTCATTTTTCAGCT 59.516 34.615 18.32 0.00 47.00 4.24
73 74 6.661669 CCCTGAAATTTTGTCATTTTTCAGC 58.338 36.000 18.32 0.00 47.00 4.26
75 76 6.038050 GTGCCCTGAAATTTTGTCATTTTTCA 59.962 34.615 0.00 0.00 36.80 2.69
76 77 6.260714 AGTGCCCTGAAATTTTGTCATTTTTC 59.739 34.615 0.00 0.00 0.00 2.29
77 78 6.121590 AGTGCCCTGAAATTTTGTCATTTTT 58.878 32.000 0.00 0.00 0.00 1.94
78 79 5.683681 AGTGCCCTGAAATTTTGTCATTTT 58.316 33.333 0.00 0.00 0.00 1.82
89 90 4.007659 CCGTAAAACTAGTGCCCTGAAAT 58.992 43.478 0.00 0.00 0.00 2.17
127 128 4.103153 CAGCAGAGATAAGGTATTTGGGGA 59.897 45.833 0.00 0.00 0.00 4.81
131 132 3.817647 GGGCAGCAGAGATAAGGTATTTG 59.182 47.826 0.00 0.00 0.00 2.32
174 175 5.428253 TCTCCAATAGTTGATGTACAAGCC 58.572 41.667 0.00 0.00 39.30 4.35
211 569 8.268605 AGGAAAAGAAGTTAGGAATGGAGATAC 58.731 37.037 0.00 0.00 0.00 2.24
244 602 2.235891 TGTCACATATCGCCCGTATCT 58.764 47.619 0.00 0.00 0.00 1.98
245 603 2.717580 TGTCACATATCGCCCGTATC 57.282 50.000 0.00 0.00 0.00 2.24
246 604 2.299013 ACATGTCACATATCGCCCGTAT 59.701 45.455 0.00 0.00 0.00 3.06
247 605 1.684450 ACATGTCACATATCGCCCGTA 59.316 47.619 0.00 0.00 0.00 4.02
260 618 1.135402 CGTCGATGTCTCCACATGTCA 60.135 52.381 0.00 0.00 43.79 3.58
306 664 6.064060 CCCTGGTTGCTCATGATAGATTTTA 58.936 40.000 0.00 0.00 0.00 1.52
307 665 4.891756 CCCTGGTTGCTCATGATAGATTTT 59.108 41.667 0.00 0.00 0.00 1.82
315 673 2.356278 GGCCCTGGTTGCTCATGA 59.644 61.111 0.00 0.00 0.00 3.07
328 686 0.107557 CCAGCAAAAATGATGGGCCC 60.108 55.000 17.59 17.59 41.31 5.80
335 693 0.757512 TGCAAGGCCAGCAAAAATGA 59.242 45.000 19.15 0.00 39.39 2.57
351 709 4.524802 AAATACATCCCTCCAAGATGCA 57.475 40.909 0.00 0.00 44.08 3.96
355 713 6.326583 AGACGATAAAATACATCCCTCCAAGA 59.673 38.462 0.00 0.00 0.00 3.02
387 745 6.381481 TCAATTCTGGTAGCATATGCAAAG 57.619 37.500 28.62 18.55 45.16 2.77
388 746 6.239092 CCATCAATTCTGGTAGCATATGCAAA 60.239 38.462 28.62 14.08 45.16 3.68
389 747 5.242171 CCATCAATTCTGGTAGCATATGCAA 59.758 40.000 28.62 13.75 45.16 4.08
402 760 3.434309 AGTTTGGGACCCATCAATTCTG 58.566 45.455 15.83 0.00 31.53 3.02
424 782 8.925161 TGTACCATGTTCAAAAGAAAAAGAAG 57.075 30.769 0.00 0.00 0.00 2.85
425 783 8.744652 TCTGTACCATGTTCAAAAGAAAAAGAA 58.255 29.630 0.00 0.00 0.00 2.52
426 784 8.188139 GTCTGTACCATGTTCAAAAGAAAAAGA 58.812 33.333 0.00 0.00 0.00 2.52
427 785 7.165812 CGTCTGTACCATGTTCAAAAGAAAAAG 59.834 37.037 0.00 0.00 0.00 2.27
428 786 6.970043 CGTCTGTACCATGTTCAAAAGAAAAA 59.030 34.615 0.00 0.00 0.00 1.94
429 787 6.094325 ACGTCTGTACCATGTTCAAAAGAAAA 59.906 34.615 0.00 0.00 0.00 2.29
430 788 5.587043 ACGTCTGTACCATGTTCAAAAGAAA 59.413 36.000 0.00 0.00 0.00 2.52
431 789 5.120399 ACGTCTGTACCATGTTCAAAAGAA 58.880 37.500 0.00 0.00 0.00 2.52
432 790 4.699637 ACGTCTGTACCATGTTCAAAAGA 58.300 39.130 0.00 0.00 0.00 2.52
433 791 6.533819 TTACGTCTGTACCATGTTCAAAAG 57.466 37.500 0.00 0.00 0.00 2.27
434 792 5.049954 GCTTACGTCTGTACCATGTTCAAAA 60.050 40.000 0.00 0.00 0.00 2.44
435 793 4.449743 GCTTACGTCTGTACCATGTTCAAA 59.550 41.667 0.00 0.00 0.00 2.69
436 794 3.991773 GCTTACGTCTGTACCATGTTCAA 59.008 43.478 0.00 0.00 0.00 2.69
437 795 3.581755 GCTTACGTCTGTACCATGTTCA 58.418 45.455 0.00 0.00 0.00 3.18
438 796 2.597305 CGCTTACGTCTGTACCATGTTC 59.403 50.000 0.00 0.00 33.53 3.18
439 797 2.602878 CGCTTACGTCTGTACCATGTT 58.397 47.619 0.00 0.00 33.53 2.71
440 798 1.734707 GCGCTTACGTCTGTACCATGT 60.735 52.381 0.00 0.00 42.83 3.21
441 799 0.921347 GCGCTTACGTCTGTACCATG 59.079 55.000 0.00 0.00 42.83 3.66
442 800 0.815734 AGCGCTTACGTCTGTACCAT 59.184 50.000 2.64 0.00 42.83 3.55
443 801 0.169672 GAGCGCTTACGTCTGTACCA 59.830 55.000 13.26 0.00 42.83 3.25
444 802 0.169672 TGAGCGCTTACGTCTGTACC 59.830 55.000 13.26 0.00 42.83 3.34
445 803 2.190325 ATGAGCGCTTACGTCTGTAC 57.810 50.000 13.26 0.00 42.83 2.90
446 804 5.874895 ATATATGAGCGCTTACGTCTGTA 57.125 39.130 13.26 0.00 42.83 2.74
447 805 4.768130 ATATATGAGCGCTTACGTCTGT 57.232 40.909 13.26 0.00 42.83 3.41
448 806 6.570423 CGTATATATATGAGCGCTTACGTCTG 59.430 42.308 20.21 0.00 42.83 3.51
449 807 6.647569 CGTATATATATGAGCGCTTACGTCT 58.352 40.000 20.21 2.58 42.83 4.18
450 808 5.336469 GCGTATATATATGAGCGCTTACGTC 59.664 44.000 25.70 17.80 42.83 4.34
451 809 5.203370 GCGTATATATATGAGCGCTTACGT 58.797 41.667 25.70 13.99 42.83 3.57
452 810 5.202640 TGCGTATATATATGAGCGCTTACG 58.797 41.667 26.11 22.81 44.34 3.18
453 811 7.801783 TGTATGCGTATATATATGAGCGCTTAC 59.198 37.037 29.56 29.56 46.34 2.34
454 812 7.801783 GTGTATGCGTATATATATGAGCGCTTA 59.198 37.037 26.11 22.89 44.34 3.09
455 813 6.637254 GTGTATGCGTATATATATGAGCGCTT 59.363 38.462 26.11 23.52 44.34 4.68
456 814 6.017026 AGTGTATGCGTATATATATGAGCGCT 60.017 38.462 26.11 11.27 44.34 5.92
457 815 6.143496 AGTGTATGCGTATATATATGAGCGC 58.857 40.000 22.61 22.61 44.29 5.92
458 816 9.827411 ATAAGTGTATGCGTATATATATGAGCG 57.173 33.333 14.94 6.20 0.00 5.03
464 822 9.636789 ACAGGGATAAGTGTATGCGTATATATA 57.363 33.333 0.00 0.00 0.00 0.86
465 823 8.414003 CACAGGGATAAGTGTATGCGTATATAT 58.586 37.037 0.00 0.00 0.00 0.86
466 824 7.612633 TCACAGGGATAAGTGTATGCGTATATA 59.387 37.037 0.00 0.00 37.07 0.86
467 825 6.436218 TCACAGGGATAAGTGTATGCGTATAT 59.564 38.462 0.00 0.00 37.07 0.86
468 826 5.771165 TCACAGGGATAAGTGTATGCGTATA 59.229 40.000 0.00 0.00 37.07 1.47
469 827 4.587262 TCACAGGGATAAGTGTATGCGTAT 59.413 41.667 0.00 0.00 37.07 3.06
470 828 3.955551 TCACAGGGATAAGTGTATGCGTA 59.044 43.478 0.00 0.00 37.07 4.42
471 829 2.764010 TCACAGGGATAAGTGTATGCGT 59.236 45.455 0.00 0.00 37.07 5.24
472 830 3.452755 TCACAGGGATAAGTGTATGCG 57.547 47.619 0.00 0.00 37.07 4.73
473 831 3.555956 CGTTCACAGGGATAAGTGTATGC 59.444 47.826 0.00 0.00 37.07 3.14
474 832 4.755411 ACGTTCACAGGGATAAGTGTATG 58.245 43.478 0.00 0.00 37.07 2.39
475 833 5.419788 TGTACGTTCACAGGGATAAGTGTAT 59.580 40.000 0.00 0.00 37.07 2.29
476 834 4.766373 TGTACGTTCACAGGGATAAGTGTA 59.234 41.667 0.00 0.00 37.07 2.90
477 835 3.575256 TGTACGTTCACAGGGATAAGTGT 59.425 43.478 0.00 0.00 37.07 3.55
478 836 4.182693 TGTACGTTCACAGGGATAAGTG 57.817 45.455 0.00 0.00 37.10 3.16
479 837 5.449588 CGTATGTACGTTCACAGGGATAAGT 60.450 44.000 0.00 0.00 44.13 2.24
480 838 4.974275 CGTATGTACGTTCACAGGGATAAG 59.026 45.833 0.00 0.00 44.13 1.73
481 839 4.923893 CGTATGTACGTTCACAGGGATAA 58.076 43.478 0.00 0.00 44.13 1.75
482 840 4.556942 CGTATGTACGTTCACAGGGATA 57.443 45.455 0.00 0.00 44.13 2.59
483 841 3.431922 CGTATGTACGTTCACAGGGAT 57.568 47.619 0.00 0.00 44.13 3.85
484 842 2.925578 CGTATGTACGTTCACAGGGA 57.074 50.000 0.00 0.00 44.13 4.20
495 853 2.232208 GGGGTAGGGTATGCGTATGTAC 59.768 54.545 0.00 0.00 0.00 2.90
496 854 2.110543 AGGGGTAGGGTATGCGTATGTA 59.889 50.000 0.00 0.00 0.00 2.29
497 855 1.132945 AGGGGTAGGGTATGCGTATGT 60.133 52.381 0.00 0.00 0.00 2.29
498 856 1.640917 AGGGGTAGGGTATGCGTATG 58.359 55.000 0.00 0.00 0.00 2.39
499 857 3.012047 TCATAGGGGTAGGGTATGCGTAT 59.988 47.826 0.00 0.00 0.00 3.06
500 858 2.379567 TCATAGGGGTAGGGTATGCGTA 59.620 50.000 0.00 0.00 0.00 4.42
501 859 1.148446 TCATAGGGGTAGGGTATGCGT 59.852 52.381 0.00 0.00 0.00 5.24
502 860 1.825474 CTCATAGGGGTAGGGTATGCG 59.175 57.143 0.00 0.00 0.00 4.73
503 861 1.555533 GCTCATAGGGGTAGGGTATGC 59.444 57.143 0.00 0.00 0.00 3.14
504 862 2.902608 TGCTCATAGGGGTAGGGTATG 58.097 52.381 0.00 0.00 0.00 2.39
505 863 3.341280 AGATGCTCATAGGGGTAGGGTAT 59.659 47.826 0.00 0.00 0.00 2.73
506 864 2.728013 AGATGCTCATAGGGGTAGGGTA 59.272 50.000 0.00 0.00 0.00 3.69
507 865 1.509961 AGATGCTCATAGGGGTAGGGT 59.490 52.381 0.00 0.00 0.00 4.34
508 866 2.334006 AGATGCTCATAGGGGTAGGG 57.666 55.000 0.00 0.00 0.00 3.53
509 867 5.825593 TTAAAGATGCTCATAGGGGTAGG 57.174 43.478 0.00 0.00 0.00 3.18
510 868 9.220767 GTTTATTAAAGATGCTCATAGGGGTAG 57.779 37.037 0.00 0.00 0.00 3.18
511 869 8.945193 AGTTTATTAAAGATGCTCATAGGGGTA 58.055 33.333 0.00 0.00 0.00 3.69
512 870 7.721399 CAGTTTATTAAAGATGCTCATAGGGGT 59.279 37.037 0.00 0.00 0.00 4.95
513 871 7.939039 TCAGTTTATTAAAGATGCTCATAGGGG 59.061 37.037 0.00 0.00 0.00 4.79
514 872 8.908786 TCAGTTTATTAAAGATGCTCATAGGG 57.091 34.615 0.00 0.00 0.00 3.53
517 875 8.826710 CGGTTCAGTTTATTAAAGATGCTCATA 58.173 33.333 0.00 0.00 0.00 2.15
518 876 7.201732 CCGGTTCAGTTTATTAAAGATGCTCAT 60.202 37.037 0.00 0.00 0.00 2.90
519 877 6.093495 CCGGTTCAGTTTATTAAAGATGCTCA 59.907 38.462 0.00 0.00 0.00 4.26
520 878 6.093633 ACCGGTTCAGTTTATTAAAGATGCTC 59.906 38.462 0.00 0.00 0.00 4.26
521 879 5.944007 ACCGGTTCAGTTTATTAAAGATGCT 59.056 36.000 0.00 0.00 0.00 3.79
522 880 6.190954 ACCGGTTCAGTTTATTAAAGATGC 57.809 37.500 0.00 0.00 0.00 3.91
530 888 9.273016 CAAGATGATATACCGGTTCAGTTTATT 57.727 33.333 15.04 0.00 0.00 1.40
531 889 8.647796 TCAAGATGATATACCGGTTCAGTTTAT 58.352 33.333 15.04 0.00 0.00 1.40
532 890 8.014070 TCAAGATGATATACCGGTTCAGTTTA 57.986 34.615 15.04 0.00 0.00 2.01
533 891 6.884832 TCAAGATGATATACCGGTTCAGTTT 58.115 36.000 15.04 6.56 0.00 2.66
534 892 6.323996 TCTCAAGATGATATACCGGTTCAGTT 59.676 38.462 15.04 5.88 0.00 3.16
535 893 5.833667 TCTCAAGATGATATACCGGTTCAGT 59.166 40.000 15.04 0.00 0.00 3.41
536 894 6.332735 TCTCAAGATGATATACCGGTTCAG 57.667 41.667 15.04 0.00 0.00 3.02
537 895 6.918067 ATCTCAAGATGATATACCGGTTCA 57.082 37.500 15.04 11.89 32.68 3.18
538 896 9.141400 GTAAATCTCAAGATGATATACCGGTTC 57.859 37.037 15.04 4.78 34.49 3.62
539 897 7.813148 CGTAAATCTCAAGATGATATACCGGTT 59.187 37.037 15.04 3.05 34.49 4.44
540 898 7.176165 TCGTAAATCTCAAGATGATATACCGGT 59.824 37.037 13.98 13.98 34.49 5.28
541 899 7.535997 TCGTAAATCTCAAGATGATATACCGG 58.464 38.462 0.00 0.00 34.49 5.28
542 900 8.965986 TTCGTAAATCTCAAGATGATATACCG 57.034 34.615 0.00 0.00 34.49 4.02
543 901 9.915629 ACTTCGTAAATCTCAAGATGATATACC 57.084 33.333 0.00 0.00 34.49 2.73
547 905 9.684448 GATGACTTCGTAAATCTCAAGATGATA 57.316 33.333 0.00 0.00 34.49 2.15
548 906 8.200120 TGATGACTTCGTAAATCTCAAGATGAT 58.800 33.333 0.00 0.00 34.49 2.45
549 907 7.547227 TGATGACTTCGTAAATCTCAAGATGA 58.453 34.615 0.00 0.00 34.49 2.92
550 908 7.761651 TGATGACTTCGTAAATCTCAAGATG 57.238 36.000 0.00 0.00 34.49 2.90
551 909 9.689976 CTATGATGACTTCGTAAATCTCAAGAT 57.310 33.333 0.00 0.00 36.07 2.40
552 910 8.903820 TCTATGATGACTTCGTAAATCTCAAGA 58.096 33.333 0.00 0.00 0.00 3.02
553 911 9.689976 ATCTATGATGACTTCGTAAATCTCAAG 57.310 33.333 0.00 0.00 0.00 3.02
554 912 9.468532 CATCTATGATGACTTCGTAAATCTCAA 57.531 33.333 1.64 0.00 0.00 3.02
555 913 7.596621 GCATCTATGATGACTTCGTAAATCTCA 59.403 37.037 11.25 0.00 0.00 3.27
556 914 7.062839 GGCATCTATGATGACTTCGTAAATCTC 59.937 40.741 11.25 0.00 0.00 2.75
557 915 6.870965 GGCATCTATGATGACTTCGTAAATCT 59.129 38.462 11.25 0.00 0.00 2.40
558 916 6.870965 AGGCATCTATGATGACTTCGTAAATC 59.129 38.462 9.88 0.00 32.45 2.17
559 917 6.763355 AGGCATCTATGATGACTTCGTAAAT 58.237 36.000 9.88 0.00 32.45 1.40
560 918 6.161855 AGGCATCTATGATGACTTCGTAAA 57.838 37.500 9.88 0.00 32.45 2.01
561 919 5.562890 CGAGGCATCTATGATGACTTCGTAA 60.563 44.000 15.97 0.00 37.55 3.18
562 920 4.083271 CGAGGCATCTATGATGACTTCGTA 60.083 45.833 15.97 0.00 37.55 3.43
563 921 3.304996 CGAGGCATCTATGATGACTTCGT 60.305 47.826 15.97 0.00 37.55 3.85
564 922 3.240884 CGAGGCATCTATGATGACTTCG 58.759 50.000 15.97 15.50 37.55 3.79
565 923 4.233789 GACGAGGCATCTATGATGACTTC 58.766 47.826 15.97 8.04 37.55 3.01
566 924 3.304996 CGACGAGGCATCTATGATGACTT 60.305 47.826 15.97 2.72 37.55 3.01
567 925 2.227626 CGACGAGGCATCTATGATGACT 59.772 50.000 14.96 14.96 40.74 3.41
568 926 2.590073 CGACGAGGCATCTATGATGAC 58.410 52.381 11.25 8.40 0.00 3.06
569 927 1.068264 GCGACGAGGCATCTATGATGA 60.068 52.381 11.25 0.00 0.00 2.92
570 928 1.344458 GCGACGAGGCATCTATGATG 58.656 55.000 0.00 3.42 0.00 3.07
571 929 0.244994 GGCGACGAGGCATCTATGAT 59.755 55.000 0.00 0.00 45.92 2.45
572 930 1.660355 GGCGACGAGGCATCTATGA 59.340 57.895 0.00 0.00 45.92 2.15
573 931 4.251760 GGCGACGAGGCATCTATG 57.748 61.111 0.00 0.00 45.92 2.23
586 944 1.662446 GAGGTGTTTTCGTCGGCGA 60.662 57.895 8.66 8.66 46.36 5.54
587 945 2.664436 GGAGGTGTTTTCGTCGGCG 61.664 63.158 1.15 1.15 39.92 6.46
588 946 0.883370 AAGGAGGTGTTTTCGTCGGC 60.883 55.000 0.00 0.00 0.00 5.54
589 947 1.145803 GAAGGAGGTGTTTTCGTCGG 58.854 55.000 0.00 0.00 0.00 4.79
590 948 1.145803 GGAAGGAGGTGTTTTCGTCG 58.854 55.000 0.00 0.00 0.00 5.12
591 949 1.871676 GTGGAAGGAGGTGTTTTCGTC 59.128 52.381 0.00 0.00 0.00 4.20
592 950 1.476291 GGTGGAAGGAGGTGTTTTCGT 60.476 52.381 0.00 0.00 0.00 3.85
593 951 1.235724 GGTGGAAGGAGGTGTTTTCG 58.764 55.000 0.00 0.00 0.00 3.46
594 952 1.202722 TCGGTGGAAGGAGGTGTTTTC 60.203 52.381 0.00 0.00 0.00 2.29
595 953 0.841289 TCGGTGGAAGGAGGTGTTTT 59.159 50.000 0.00 0.00 0.00 2.43
596 954 0.841289 TTCGGTGGAAGGAGGTGTTT 59.159 50.000 0.00 0.00 0.00 2.83
597 955 0.841289 TTTCGGTGGAAGGAGGTGTT 59.159 50.000 0.00 0.00 32.80 3.32
598 956 0.396811 CTTTCGGTGGAAGGAGGTGT 59.603 55.000 0.00 0.00 31.29 4.16
599 957 0.955919 GCTTTCGGTGGAAGGAGGTG 60.956 60.000 0.00 0.00 31.29 4.00
600 958 1.375326 GCTTTCGGTGGAAGGAGGT 59.625 57.895 0.00 0.00 31.29 3.85
601 959 0.250727 TTGCTTTCGGTGGAAGGAGG 60.251 55.000 0.00 0.00 31.29 4.30
602 960 1.604604 TTTGCTTTCGGTGGAAGGAG 58.395 50.000 0.00 0.00 31.29 3.69
603 961 2.159382 GATTTGCTTTCGGTGGAAGGA 58.841 47.619 0.00 0.00 31.29 3.36
604 962 1.885887 TGATTTGCTTTCGGTGGAAGG 59.114 47.619 0.00 0.00 32.80 3.46
605 963 3.728864 CGATGATTTGCTTTCGGTGGAAG 60.729 47.826 0.00 0.00 32.80 3.46
606 964 2.161410 CGATGATTTGCTTTCGGTGGAA 59.839 45.455 0.00 0.00 0.00 3.53
607 965 1.737236 CGATGATTTGCTTTCGGTGGA 59.263 47.619 0.00 0.00 0.00 4.02
608 966 1.737236 TCGATGATTTGCTTTCGGTGG 59.263 47.619 0.00 0.00 32.67 4.61
609 967 3.469899 TTCGATGATTTGCTTTCGGTG 57.530 42.857 0.00 0.00 32.67 4.94
610 968 4.497473 TTTTCGATGATTTGCTTTCGGT 57.503 36.364 0.00 0.00 32.67 4.69
611 969 5.094812 TGATTTTCGATGATTTGCTTTCGG 58.905 37.500 0.00 0.00 32.67 4.30
612 970 6.469915 TCATGATTTTCGATGATTTGCTTTCG 59.530 34.615 0.00 0.00 0.00 3.46
613 971 7.745022 TCATGATTTTCGATGATTTGCTTTC 57.255 32.000 0.00 0.00 0.00 2.62
614 972 8.537049 TTTCATGATTTTCGATGATTTGCTTT 57.463 26.923 0.00 0.00 0.00 3.51
615 973 8.712285 ATTTCATGATTTTCGATGATTTGCTT 57.288 26.923 0.00 0.00 0.00 3.91
616 974 9.806203 TTATTTCATGATTTTCGATGATTTGCT 57.194 25.926 0.00 0.00 0.00 3.91
640 998 9.719279 CCGGTGCTCGTATTATTTTTAAATTTA 57.281 29.630 0.00 0.00 37.11 1.40
641 999 7.703197 CCCGGTGCTCGTATTATTTTTAAATTT 59.297 33.333 0.00 0.00 37.11 1.82
642 1000 7.067251 TCCCGGTGCTCGTATTATTTTTAAATT 59.933 33.333 0.00 0.00 37.11 1.82
643 1001 6.543100 TCCCGGTGCTCGTATTATTTTTAAAT 59.457 34.615 0.00 0.00 37.11 1.40
644 1002 5.879223 TCCCGGTGCTCGTATTATTTTTAAA 59.121 36.000 0.00 0.00 37.11 1.52
645 1003 5.294060 GTCCCGGTGCTCGTATTATTTTTAA 59.706 40.000 0.00 0.00 37.11 1.52
646 1004 4.810491 GTCCCGGTGCTCGTATTATTTTTA 59.190 41.667 0.00 0.00 37.11 1.52
647 1005 3.624410 GTCCCGGTGCTCGTATTATTTTT 59.376 43.478 0.00 0.00 37.11 1.94
648 1006 3.118519 AGTCCCGGTGCTCGTATTATTTT 60.119 43.478 0.00 0.00 37.11 1.82
649 1007 2.433239 AGTCCCGGTGCTCGTATTATTT 59.567 45.455 0.00 0.00 37.11 1.40
650 1008 2.037144 AGTCCCGGTGCTCGTATTATT 58.963 47.619 0.00 0.00 37.11 1.40
651 1009 1.700955 AGTCCCGGTGCTCGTATTAT 58.299 50.000 0.00 0.00 37.11 1.28
652 1010 1.135527 CAAGTCCCGGTGCTCGTATTA 59.864 52.381 0.00 0.00 37.11 0.98
653 1011 0.108329 CAAGTCCCGGTGCTCGTATT 60.108 55.000 0.00 0.00 37.11 1.89
654 1012 0.968901 TCAAGTCCCGGTGCTCGTAT 60.969 55.000 0.00 0.00 37.11 3.06
655 1013 1.180456 TTCAAGTCCCGGTGCTCGTA 61.180 55.000 0.00 0.00 37.11 3.43
656 1014 1.827399 ATTCAAGTCCCGGTGCTCGT 61.827 55.000 0.00 0.00 37.11 4.18
657 1015 0.673644 AATTCAAGTCCCGGTGCTCG 60.674 55.000 0.00 0.00 38.88 5.03
658 1016 0.804989 CAATTCAAGTCCCGGTGCTC 59.195 55.000 0.00 0.00 0.00 4.26
659 1017 0.400213 TCAATTCAAGTCCCGGTGCT 59.600 50.000 0.00 0.00 0.00 4.40
660 1018 1.463674 ATCAATTCAAGTCCCGGTGC 58.536 50.000 0.00 0.00 0.00 5.01
661 1019 2.164219 CCAATCAATTCAAGTCCCGGTG 59.836 50.000 0.00 0.00 0.00 4.94
662 1020 2.225017 ACCAATCAATTCAAGTCCCGGT 60.225 45.455 0.00 0.00 0.00 5.28
663 1021 2.423538 GACCAATCAATTCAAGTCCCGG 59.576 50.000 0.00 0.00 0.00 5.73
664 1022 2.423538 GGACCAATCAATTCAAGTCCCG 59.576 50.000 0.00 0.00 38.25 5.14
666 1024 3.193479 GTGGGACCAATCAATTCAAGTCC 59.807 47.826 0.00 0.00 42.48 3.85
667 1025 3.826157 TGTGGGACCAATCAATTCAAGTC 59.174 43.478 0.00 0.00 0.00 3.01
668 1026 3.573967 GTGTGGGACCAATCAATTCAAGT 59.426 43.478 0.00 0.00 0.00 3.16
669 1027 3.828451 AGTGTGGGACCAATCAATTCAAG 59.172 43.478 0.00 0.00 0.00 3.02
670 1028 3.826157 GAGTGTGGGACCAATCAATTCAA 59.174 43.478 0.00 0.00 30.16 2.69
671 1029 3.074390 AGAGTGTGGGACCAATCAATTCA 59.926 43.478 0.00 0.00 32.08 2.57
672 1030 3.690460 AGAGTGTGGGACCAATCAATTC 58.310 45.455 0.00 0.00 32.08 2.17
673 1031 3.814504 AGAGTGTGGGACCAATCAATT 57.185 42.857 0.00 0.00 32.08 2.32
674 1032 3.331889 AGAAGAGTGTGGGACCAATCAAT 59.668 43.478 0.00 0.00 32.08 2.57
675 1033 2.711009 AGAAGAGTGTGGGACCAATCAA 59.289 45.455 0.00 0.00 32.08 2.57
676 1034 2.038952 CAGAAGAGTGTGGGACCAATCA 59.961 50.000 0.00 0.00 32.08 2.57
677 1035 2.704572 CAGAAGAGTGTGGGACCAATC 58.295 52.381 0.00 0.00 0.00 2.67
678 1036 1.271597 GCAGAAGAGTGTGGGACCAAT 60.272 52.381 0.00 0.00 0.00 3.16
679 1037 0.108585 GCAGAAGAGTGTGGGACCAA 59.891 55.000 0.00 0.00 0.00 3.67
680 1038 1.754745 GCAGAAGAGTGTGGGACCA 59.245 57.895 0.00 0.00 0.00 4.02
681 1039 1.374758 CGCAGAAGAGTGTGGGACC 60.375 63.158 0.00 0.00 33.21 4.46
682 1040 1.666011 TCGCAGAAGAGTGTGGGAC 59.334 57.895 0.00 0.00 35.39 4.46
683 1041 1.666011 GTCGCAGAAGAGTGTGGGA 59.334 57.895 0.00 0.00 39.69 4.37
684 1042 1.734477 CGTCGCAGAAGAGTGTGGG 60.734 63.158 0.00 0.00 38.59 4.61
685 1043 1.007271 ACGTCGCAGAAGAGTGTGG 60.007 57.895 0.00 0.00 38.59 4.17
686 1044 0.317854 TCACGTCGCAGAAGAGTGTG 60.318 55.000 0.00 0.00 38.59 3.82
687 1045 0.317938 GTCACGTCGCAGAAGAGTGT 60.318 55.000 0.00 0.00 38.59 3.55
688 1046 1.330779 CGTCACGTCGCAGAAGAGTG 61.331 60.000 0.00 0.00 38.59 3.51
689 1047 1.082038 CGTCACGTCGCAGAAGAGT 60.082 57.895 0.00 0.00 38.59 3.24
690 1048 0.791238 CTCGTCACGTCGCAGAAGAG 60.791 60.000 13.68 13.68 38.59 2.85
691 1049 1.206831 CTCGTCACGTCGCAGAAGA 59.793 57.895 0.00 0.00 38.59 2.87
692 1050 2.429351 GCTCGTCACGTCGCAGAAG 61.429 63.158 0.00 0.00 39.69 2.85
693 1051 2.428569 GCTCGTCACGTCGCAGAA 60.429 61.111 0.00 0.00 39.69 3.02
694 1052 4.400109 GGCTCGTCACGTCGCAGA 62.400 66.667 14.34 0.00 0.00 4.26
695 1053 4.406173 AGGCTCGTCACGTCGCAG 62.406 66.667 14.34 0.00 0.00 5.18
696 1054 4.700365 CAGGCTCGTCACGTCGCA 62.700 66.667 14.34 0.00 0.00 5.10
699 1057 3.891586 TTCGCAGGCTCGTCACGTC 62.892 63.158 0.00 0.00 0.00 4.34
700 1058 3.282745 ATTCGCAGGCTCGTCACGT 62.283 57.895 0.00 0.00 0.00 4.49
701 1059 2.507102 ATTCGCAGGCTCGTCACG 60.507 61.111 0.00 0.00 0.00 4.35
702 1060 1.416813 CTCATTCGCAGGCTCGTCAC 61.417 60.000 6.32 0.00 0.00 3.67
706 1064 2.236382 GCTCTCATTCGCAGGCTCG 61.236 63.158 0.00 0.00 0.00 5.03
742 1100 0.824595 AAAGTGTGGGTTTACGGCCC 60.825 55.000 0.00 0.00 46.26 5.80
763 1121 3.228017 TGGCCAACTCGGTGTCGA 61.228 61.111 0.61 0.00 43.86 4.20
764 1122 3.041940 GTGGCCAACTCGGTGTCG 61.042 66.667 7.24 0.00 36.97 4.35
765 1123 2.668550 GGTGGCCAACTCGGTGTC 60.669 66.667 15.48 0.00 36.97 3.67
766 1124 4.265056 GGGTGGCCAACTCGGTGT 62.265 66.667 22.79 0.00 36.97 4.16
770 1128 4.722700 CAGGGGGTGGCCAACTCG 62.723 72.222 22.79 0.00 0.00 4.18
778 1136 3.813724 GAGGATGGCAGGGGGTGG 61.814 72.222 0.00 0.00 0.00 4.61
779 1137 1.941403 ATTGAGGATGGCAGGGGGTG 61.941 60.000 0.00 0.00 0.00 4.61
780 1138 1.623686 ATTGAGGATGGCAGGGGGT 60.624 57.895 0.00 0.00 0.00 4.95
839 1219 3.506096 CATCAGCGCTGCCTGTGG 61.506 66.667 32.44 13.13 34.47 4.17
840 1220 4.175489 GCATCAGCGCTGCCTGTG 62.175 66.667 32.44 25.04 34.47 3.66
843 1223 2.439701 ATTGCATCAGCGCTGCCT 60.440 55.556 32.44 18.88 46.23 4.75
844 1224 2.025727 GATTGCATCAGCGCTGCC 59.974 61.111 32.44 21.56 46.23 4.85
887 1270 2.737252 GGGATTTTGACGCGGATAGATC 59.263 50.000 12.47 8.23 0.00 2.75
926 1309 0.462759 GCTAATGGAGGAAGTGCGCT 60.463 55.000 9.73 0.00 0.00 5.92
937 1321 0.681733 GGCGATCTGGAGCTAATGGA 59.318 55.000 0.00 0.00 0.00 3.41
939 1323 1.287730 GCGGCGATCTGGAGCTAATG 61.288 60.000 12.98 0.00 0.00 1.90
982 1379 3.775654 GGAGAGAGGGGTGTGCGG 61.776 72.222 0.00 0.00 0.00 5.69
984 1381 3.775654 CGGGAGAGAGGGGTGTGC 61.776 72.222 0.00 0.00 0.00 4.57
985 1382 3.775654 GCGGGAGAGAGGGGTGTG 61.776 72.222 0.00 0.00 0.00 3.82
1327 1737 4.742649 AGGGAGGCGAGCGTCTGA 62.743 66.667 15.87 0.00 0.00 3.27
1874 2284 3.913548 ACGCAATGCATCAAGTACAAA 57.086 38.095 5.91 0.00 0.00 2.83
1886 2296 2.327940 GCCACCGATACGCAATGC 59.672 61.111 0.00 0.00 0.00 3.56
1895 2305 4.497291 TTATACAAAGAAGGCCACCGAT 57.503 40.909 5.01 0.00 0.00 4.18
1922 2332 3.847671 TGTGTACACCATTTCACCTGA 57.152 42.857 22.91 0.00 0.00 3.86
1940 2350 2.294233 GCCAAATCATGCCGTATCATGT 59.706 45.455 8.67 0.00 43.18 3.21
2013 2423 6.471841 CGTCTCATGAAAGAGATAGTGACAAG 59.528 42.308 0.00 0.00 45.61 3.16
2045 2455 3.555956 CAGCAGACCACATCGTTATAACC 59.444 47.826 10.01 0.00 0.00 2.85
2117 2527 9.394767 TGCATTCATCTAAGCAAGTTTCTATTA 57.605 29.630 0.00 0.00 33.48 0.98
2120 2530 7.680350 GCATGCATTCATCTAAGCAAGTTTCTA 60.680 37.037 14.21 0.00 40.76 2.10
2125 2535 3.952323 AGCATGCATTCATCTAAGCAAGT 59.048 39.130 21.98 0.00 40.76 3.16
2172 2657 6.512297 TGCAGGTTTTCTCTCATTTTTAACC 58.488 36.000 0.00 0.00 35.06 2.85
2180 2665 5.126707 GGAAATGATGCAGGTTTTCTCTCAT 59.873 40.000 14.13 3.66 0.00 2.90
2184 2669 3.118992 GGGGAAATGATGCAGGTTTTCTC 60.119 47.826 14.13 11.51 0.00 2.87
2187 2672 2.618794 TGGGGAAATGATGCAGGTTTT 58.381 42.857 0.00 0.00 0.00 2.43
2190 2675 1.077663 AGTTGGGGAAATGATGCAGGT 59.922 47.619 0.00 0.00 0.00 4.00
2194 2681 3.959535 TTCAAGTTGGGGAAATGATGC 57.040 42.857 2.34 0.00 0.00 3.91
2203 2690 2.890311 TGTACAGCATTTCAAGTTGGGG 59.110 45.455 2.34 0.00 0.00 4.96
2250 2737 5.301555 TGGATAGTGACACAATCGTGAAAA 58.698 37.500 8.59 0.00 46.80 2.29
2257 2744 6.741992 TGTTGAATGGATAGTGACACAATC 57.258 37.500 8.59 0.00 0.00 2.67
2261 2748 6.372659 ACAAGATGTTGAATGGATAGTGACAC 59.627 38.462 9.96 0.00 37.10 3.67
2291 2778 3.378427 AGAAGGTGACAAGAAACAGCAAC 59.622 43.478 0.00 0.00 37.04 4.17
2319 2807 9.120538 GCTATAATTCCAAGAGGTGTCATAAAA 57.879 33.333 0.00 0.00 35.89 1.52
2431 2919 5.220381 GCATCCATCTGTTTAGCATGATTG 58.780 41.667 0.00 0.00 0.00 2.67
2577 3067 4.518970 TGGTGCTGATAGTTTTCCAAACTC 59.481 41.667 5.15 0.00 0.00 3.01
2584 3074 5.182001 ACTCAACATGGTGCTGATAGTTTTC 59.818 40.000 5.66 0.00 0.00 2.29
2593 3083 3.569701 AGGTAAAACTCAACATGGTGCTG 59.430 43.478 5.66 3.87 0.00 4.41
2667 3158 8.853345 GTTACAAGATGCAAGTATTTCACATTG 58.147 33.333 0.00 0.00 0.00 2.82
2720 3211 7.604164 TGCACAAGAAAAGAACCAATTGTTTTA 59.396 29.630 4.43 0.00 40.37 1.52
2721 3212 6.429385 TGCACAAGAAAAGAACCAATTGTTTT 59.571 30.769 4.43 4.56 42.32 2.43
3058 3549 5.360144 TGGCTCTACTAGAAAAGATAACGCT 59.640 40.000 0.00 0.00 0.00 5.07
3059 3550 5.589192 TGGCTCTACTAGAAAAGATAACGC 58.411 41.667 0.00 0.00 0.00 4.84
3147 3642 7.488187 AGGATGATATCTTTGTTGAACGATG 57.512 36.000 3.98 0.00 0.00 3.84
3251 3746 2.018515 ACGGCGAGGAAAGAAACAAAA 58.981 42.857 16.62 0.00 0.00 2.44
3345 3842 7.625828 AGCACAACTTTGTACTAAAGAAGTT 57.374 32.000 18.56 12.34 41.55 2.66
3346 3843 8.726870 TTAGCACAACTTTGTACTAAAGAAGT 57.273 30.769 18.56 14.17 41.56 3.01
3351 3848 8.948145 TCAACTTTAGCACAACTTTGTACTAAA 58.052 29.630 19.50 19.50 46.64 1.85
3352 3849 8.495361 TCAACTTTAGCACAACTTTGTACTAA 57.505 30.769 9.74 9.74 42.33 2.24
3353 3850 7.982919 TCTCAACTTTAGCACAACTTTGTACTA 59.017 33.333 0.00 0.00 39.91 1.82
3354 3851 6.821665 TCTCAACTTTAGCACAACTTTGTACT 59.178 34.615 0.65 0.65 39.91 2.73
3355 3852 6.905609 GTCTCAACTTTAGCACAACTTTGTAC 59.094 38.462 0.00 0.00 39.91 2.90
3356 3853 6.596106 TGTCTCAACTTTAGCACAACTTTGTA 59.404 34.615 0.00 0.00 39.91 2.41
3357 3854 5.414454 TGTCTCAACTTTAGCACAACTTTGT 59.586 36.000 0.00 0.00 43.36 2.83
3367 3864 7.084486 CCCAAAATAAGTGTCTCAACTTTAGC 58.916 38.462 0.00 0.00 40.77 3.09
3368 3865 7.040409 AGCCCAAAATAAGTGTCTCAACTTTAG 60.040 37.037 0.00 0.00 40.77 1.85
3393 3890 2.763448 GCCTAGCATATACTCCCTCCAG 59.237 54.545 0.00 0.00 0.00 3.86
3394 3891 2.559931 GGCCTAGCATATACTCCCTCCA 60.560 54.545 0.00 0.00 0.00 3.86
3399 3896 2.112190 GGAGGGCCTAGCATATACTCC 58.888 57.143 5.73 2.53 36.60 3.85
3412 3909 2.711547 ACTTATTATGGACTGGAGGGCC 59.288 50.000 0.00 0.00 45.52 5.80
3413 3910 3.136626 ACACTTATTATGGACTGGAGGGC 59.863 47.826 0.00 0.00 0.00 5.19
3420 3917 4.737855 ACTGCGACACTTATTATGGACT 57.262 40.909 0.00 0.00 0.00 3.85
3421 3918 5.796350 AAACTGCGACACTTATTATGGAC 57.204 39.130 0.00 0.00 0.00 4.02
3433 3930 3.537580 ACCTTAGTTCAAAACTGCGACA 58.462 40.909 2.65 0.00 42.84 4.35
3456 3953 6.329197 TGATAAAATTTACTCCCTCCGATCCT 59.671 38.462 0.00 0.00 0.00 3.24
3457 3954 6.531021 TGATAAAATTTACTCCCTCCGATCC 58.469 40.000 0.00 0.00 0.00 3.36
3458 3955 7.661847 ACATGATAAAATTTACTCCCTCCGATC 59.338 37.037 0.00 0.00 0.00 3.69
3548 4083 2.093075 AGCCAGTCCTCATCATGAACTG 60.093 50.000 14.86 14.86 0.00 3.16
3562 4097 0.889306 AGAACACTCGGTAGCCAGTC 59.111 55.000 0.00 0.00 0.00 3.51
3567 4102 4.748600 ACTTTTAACAGAACACTCGGTAGC 59.251 41.667 0.00 0.00 29.02 3.58
3586 4121 5.261216 TCTGAACAAAGGAAACTGGACTTT 58.739 37.500 0.00 0.00 42.68 2.66
3659 4194 6.074676 GCATGCAGAAAGTTTAGTTGTTGAAG 60.075 38.462 14.21 0.00 0.00 3.02
3662 4197 5.042593 TGCATGCAGAAAGTTTAGTTGTTG 58.957 37.500 18.46 0.00 0.00 3.33
3668 4203 4.813027 ACCATTGCATGCAGAAAGTTTAG 58.187 39.130 21.50 6.07 0.00 1.85
3670 4205 3.756933 ACCATTGCATGCAGAAAGTTT 57.243 38.095 21.50 0.00 0.00 2.66
3681 4216 1.895131 GGTGGAAGACAACCATTGCAT 59.105 47.619 0.00 0.00 39.69 3.96
3723 4258 4.216411 GGGCATCAGACCACTTTAACTA 57.784 45.455 0.00 0.00 45.05 2.24
3733 4270 0.689623 CCTATCTGGGGCATCAGACC 59.310 60.000 11.12 0.00 45.27 3.85
3734 4271 1.722034 TCCTATCTGGGGCATCAGAC 58.278 55.000 11.12 0.00 45.27 3.51
3771 4308 3.128242 ACAGGACAATTACGAGGAGTACG 59.872 47.826 0.00 0.00 34.56 3.67
3783 4320 2.091885 ACAGGACAACCACAGGACAATT 60.092 45.455 0.00 0.00 38.94 2.32
3785 4322 0.916086 ACAGGACAACCACAGGACAA 59.084 50.000 0.00 0.00 38.94 3.18
3786 4323 0.180171 CACAGGACAACCACAGGACA 59.820 55.000 0.00 0.00 38.94 4.02
3787 4324 0.535102 CCACAGGACAACCACAGGAC 60.535 60.000 0.00 0.00 38.94 3.85
3788 4325 0.986019 ACCACAGGACAACCACAGGA 60.986 55.000 0.00 0.00 38.94 3.86
3789 4326 0.819259 CACCACAGGACAACCACAGG 60.819 60.000 0.00 0.00 38.94 4.00
3790 4327 1.447317 GCACCACAGGACAACCACAG 61.447 60.000 0.00 0.00 38.94 3.66
3791 4328 1.453015 GCACCACAGGACAACCACA 60.453 57.895 0.00 0.00 38.94 4.17
3792 4329 1.034838 TTGCACCACAGGACAACCAC 61.035 55.000 0.00 0.00 38.94 4.16
3793 4330 1.034838 GTTGCACCACAGGACAACCA 61.035 55.000 12.47 0.00 37.34 3.67
3794 4331 1.034838 TGTTGCACCACAGGACAACC 61.035 55.000 17.47 0.00 40.09 3.77
3795 4332 0.814457 TTGTTGCACCACAGGACAAC 59.186 50.000 15.03 15.03 40.67 3.32
3937 4474 2.290260 CCAGGTGATCACTACAGGCAAA 60.290 50.000 24.50 0.00 0.00 3.68
4114 4652 1.302431 CACAGTGCGGGGTCATTGA 60.302 57.895 0.00 0.00 0.00 2.57
4165 4705 6.209774 TCTGGATCTTGAGGGGAACTTAATA 58.790 40.000 0.00 0.00 0.00 0.98
4174 4714 2.752030 TGTACTCTGGATCTTGAGGGG 58.248 52.381 15.95 0.00 34.84 4.79
4262 4802 6.097554 TGCAAAAGAACAGAAGGAAATTGGTA 59.902 34.615 0.00 0.00 0.00 3.25
4661 5201 1.732259 GGTAGTGCCTTCGAACACATG 59.268 52.381 17.96 0.00 39.30 3.21
4687 5231 1.427072 ATACACAGGGGCTATGGGGC 61.427 60.000 0.00 0.00 40.05 5.80
4718 5262 6.540189 CGAACAAGATTCCACATATTCCTCTT 59.460 38.462 0.00 0.00 0.00 2.85
4836 5386 4.025401 GCCACAAACCGGAGTGCG 62.025 66.667 9.46 9.12 34.48 5.34
4838 5388 0.606401 ATCTGCCACAAACCGGAGTG 60.606 55.000 9.46 13.89 35.56 3.51
4844 5394 3.665745 ATCACAAATCTGCCACAAACC 57.334 42.857 0.00 0.00 0.00 3.27
4907 5457 2.811873 GCTGTTCAATCCTGTGGACTGT 60.812 50.000 0.00 0.00 32.98 3.55
4911 5461 0.770499 TGGCTGTTCAATCCTGTGGA 59.230 50.000 0.00 0.00 35.55 4.02
4962 5512 6.405278 TTCATGGCGAATGTCTATTCTAGA 57.595 37.500 0.00 0.00 40.43 2.43
4990 5540 0.301687 GTGTCTGTTCAGTGCACGTG 59.698 55.000 12.28 12.28 0.00 4.49
5070 5620 7.162082 TCTTTTCTGATCAAACTAGGGAACTC 58.838 38.462 0.00 0.00 43.67 3.01
5089 5645 5.748630 GGGATGTTGAACTGTGTTTCTTTTC 59.251 40.000 0.00 0.00 0.00 2.29
5166 5723 2.050144 CTTTCCCCCTAGCAGCAGATA 58.950 52.381 0.00 0.00 0.00 1.98
5297 5854 1.738830 GCAGTTTGCATTGCCGCAT 60.739 52.632 6.12 0.00 44.26 4.73
5519 6082 4.637483 TTCTCTTCCACAAAGTTGCTTG 57.363 40.909 0.00 0.00 36.31 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.