Multiple sequence alignment - TraesCS6A01G130500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G130500 chr6A 100.000 3325 0 0 1 3325 101929696 101926372 0.000000e+00 6141.0
1 TraesCS6A01G130500 chr6A 96.756 2713 56 5 638 3325 523814019 523816724 0.000000e+00 4494.0
2 TraesCS6A01G130500 chr6A 97.500 40 1 0 1744 1783 101928031 101927992 5.950000e-08 69.4
3 TraesCS6A01G130500 chr6A 97.500 40 1 0 1744 1783 523815047 523815086 5.950000e-08 69.4
4 TraesCS6A01G130500 chr5A 96.609 2713 56 5 636 3325 645757999 645760698 0.000000e+00 4468.0
5 TraesCS6A01G130500 chr5A 86.207 232 32 0 406 637 426349653 426349884 5.510000e-63 252.0
6 TraesCS6A01G130500 chr5A 77.679 336 52 18 32 347 426349103 426349435 2.040000e-42 183.0
7 TraesCS6A01G130500 chr2A 95.349 2709 52 14 638 3325 61416905 61419560 0.000000e+00 4237.0
8 TraesCS6A01G130500 chr2A 94.967 2305 57 10 1057 3325 38374535 38376816 0.000000e+00 3559.0
9 TraesCS6A01G130500 chr2A 94.291 1594 44 15 1778 3325 203300207 203301799 0.000000e+00 2396.0
10 TraesCS6A01G130500 chr2A 95.905 1099 40 3 638 1736 203299100 203300193 0.000000e+00 1775.0
11 TraesCS6A01G130500 chr7A 95.184 2097 37 7 1254 3325 691256456 691254399 0.000000e+00 3254.0
12 TraesCS6A01G130500 chr1A 96.977 1588 24 3 1759 3325 376990873 376989289 0.000000e+00 2645.0
13 TraesCS6A01G130500 chr1A 97.931 870 15 1 638 1507 376991736 376990870 0.000000e+00 1504.0
14 TraesCS6A01G130500 chr3A 96.247 1572 27 5 1778 3324 111092534 111094098 0.000000e+00 2547.0
15 TraesCS6A01G130500 chr3A 96.552 1102 34 2 635 1736 111091423 111092520 0.000000e+00 1821.0
16 TraesCS6A01G130500 chr3A 97.500 40 1 0 1744 1783 111092450 111092489 5.950000e-08 69.4
17 TraesCS6A01G130500 chr3D 88.933 1744 119 24 1622 3325 561003022 561001313 0.000000e+00 2084.0
18 TraesCS6A01G130500 chr3D 94.878 898 43 2 638 1535 516903051 516903945 0.000000e+00 1400.0
19 TraesCS6A01G130500 chr3D 90.089 898 83 3 638 1535 566802645 566803536 0.000000e+00 1160.0
20 TraesCS6A01G130500 chr3D 88.386 508 29 5 1619 2125 566803578 566804056 4.780000e-163 584.0
21 TraesCS6A01G130500 chr3D 95.312 128 5 1 1609 1736 516903974 516904100 5.620000e-48 202.0
22 TraesCS6A01G130500 chr2D 92.378 984 35 9 1780 2724 87267311 87266329 0.000000e+00 1365.0
23 TraesCS6A01G130500 chr7D 92.269 983 37 10 1780 2724 417366799 417365818 0.000000e+00 1358.0
24 TraesCS6A01G130500 chr2B 91.220 877 71 6 638 1511 154278053 154277180 0.000000e+00 1188.0
25 TraesCS6A01G130500 chr6B 97.802 637 14 0 1 637 161350340 161349704 0.000000e+00 1099.0
26 TraesCS6A01G130500 chr3B 85.014 1101 104 31 1603 2698 679708023 679706979 0.000000e+00 1062.0
27 TraesCS6A01G130500 chr6D 95.209 647 21 2 1 637 84682929 84682283 0.000000e+00 1014.0
28 TraesCS6A01G130500 chr6D 94.590 647 23 3 1 637 85544617 85545261 0.000000e+00 990.0
29 TraesCS6A01G130500 chr5B 89.984 619 50 9 1761 2379 597078590 597077984 0.000000e+00 789.0
30 TraesCS6A01G130500 chr5B 78.470 353 53 16 32 364 386540495 386540146 3.360000e-50 209.0
31 TraesCS6A01G130500 chr1B 82.990 194 33 0 444 637 588486404 588486211 3.410000e-40 176.0
32 TraesCS6A01G130500 chr1D 82.011 189 34 0 444 632 435150843 435150655 9.550000e-36 161.0
33 TraesCS6A01G130500 chr1D 86.170 94 10 3 88 180 13367732 13367641 7.590000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G130500 chr6A 101926372 101929696 3324 True 3105.200000 6141 98.750000 1 3325 2 chr6A.!!$R1 3324
1 TraesCS6A01G130500 chr6A 523814019 523816724 2705 False 2281.700000 4494 97.128000 638 3325 2 chr6A.!!$F1 2687
2 TraesCS6A01G130500 chr5A 645757999 645760698 2699 False 4468.000000 4468 96.609000 636 3325 1 chr5A.!!$F1 2689
3 TraesCS6A01G130500 chr5A 426349103 426349884 781 False 217.500000 252 81.943000 32 637 2 chr5A.!!$F2 605
4 TraesCS6A01G130500 chr2A 61416905 61419560 2655 False 4237.000000 4237 95.349000 638 3325 1 chr2A.!!$F2 2687
5 TraesCS6A01G130500 chr2A 38374535 38376816 2281 False 3559.000000 3559 94.967000 1057 3325 1 chr2A.!!$F1 2268
6 TraesCS6A01G130500 chr2A 203299100 203301799 2699 False 2085.500000 2396 95.098000 638 3325 2 chr2A.!!$F3 2687
7 TraesCS6A01G130500 chr7A 691254399 691256456 2057 True 3254.000000 3254 95.184000 1254 3325 1 chr7A.!!$R1 2071
8 TraesCS6A01G130500 chr1A 376989289 376991736 2447 True 2074.500000 2645 97.454000 638 3325 2 chr1A.!!$R1 2687
9 TraesCS6A01G130500 chr3A 111091423 111094098 2675 False 1479.133333 2547 96.766333 635 3324 3 chr3A.!!$F1 2689
10 TraesCS6A01G130500 chr3D 561001313 561003022 1709 True 2084.000000 2084 88.933000 1622 3325 1 chr3D.!!$R1 1703
11 TraesCS6A01G130500 chr3D 566802645 566804056 1411 False 872.000000 1160 89.237500 638 2125 2 chr3D.!!$F2 1487
12 TraesCS6A01G130500 chr3D 516903051 516904100 1049 False 801.000000 1400 95.095000 638 1736 2 chr3D.!!$F1 1098
13 TraesCS6A01G130500 chr2D 87266329 87267311 982 True 1365.000000 1365 92.378000 1780 2724 1 chr2D.!!$R1 944
14 TraesCS6A01G130500 chr7D 417365818 417366799 981 True 1358.000000 1358 92.269000 1780 2724 1 chr7D.!!$R1 944
15 TraesCS6A01G130500 chr2B 154277180 154278053 873 True 1188.000000 1188 91.220000 638 1511 1 chr2B.!!$R1 873
16 TraesCS6A01G130500 chr6B 161349704 161350340 636 True 1099.000000 1099 97.802000 1 637 1 chr6B.!!$R1 636
17 TraesCS6A01G130500 chr3B 679706979 679708023 1044 True 1062.000000 1062 85.014000 1603 2698 1 chr3B.!!$R1 1095
18 TraesCS6A01G130500 chr6D 84682283 84682929 646 True 1014.000000 1014 95.209000 1 637 1 chr6D.!!$R1 636
19 TraesCS6A01G130500 chr6D 85544617 85545261 644 False 990.000000 990 94.590000 1 637 1 chr6D.!!$F1 636
20 TraesCS6A01G130500 chr5B 597077984 597078590 606 True 789.000000 789 89.984000 1761 2379 1 chr5B.!!$R2 618

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
521 522 0.037697 CCGGGATGTGAAGACGTCAA 60.038 55.0 19.5 0.0 39.57 3.18 F
619 620 0.179009 CCCATGTATCCACAGCCAGG 60.179 60.0 0.0 0.0 38.30 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1884 2155 1.094785 CCCCACAATTCAGTTAGGCG 58.905 55.000 0.0 0.0 0.00 5.52 R
2844 3467 4.137116 TGAACCTATGTGTGCCACTATC 57.863 45.455 0.0 0.0 35.11 2.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
123 124 6.156949 AGGAATCTAGTCAGCTTGATTGGTTA 59.843 38.462 8.51 0.00 43.56 2.85
124 125 6.995091 GGAATCTAGTCAGCTTGATTGGTTAT 59.005 38.462 8.51 0.00 43.56 1.89
125 126 7.500559 GGAATCTAGTCAGCTTGATTGGTTATT 59.499 37.037 8.51 0.00 43.56 1.40
126 127 7.798596 ATCTAGTCAGCTTGATTGGTTATTG 57.201 36.000 0.00 0.00 34.40 1.90
127 128 4.708726 AGTCAGCTTGATTGGTTATTGC 57.291 40.909 0.00 0.00 0.00 3.56
128 129 4.081406 AGTCAGCTTGATTGGTTATTGCA 58.919 39.130 0.00 0.00 0.00 4.08
129 130 4.523943 AGTCAGCTTGATTGGTTATTGCAA 59.476 37.500 0.00 0.00 0.00 4.08
130 131 4.860907 GTCAGCTTGATTGGTTATTGCAAG 59.139 41.667 4.94 0.00 39.06 4.01
131 132 4.082081 TCAGCTTGATTGGTTATTGCAAGG 60.082 41.667 4.94 0.00 37.14 3.61
132 133 4.082081 CAGCTTGATTGGTTATTGCAAGGA 60.082 41.667 4.94 0.00 37.14 3.36
133 134 4.713321 AGCTTGATTGGTTATTGCAAGGAT 59.287 37.500 4.94 0.00 37.14 3.24
134 135 4.807304 GCTTGATTGGTTATTGCAAGGATG 59.193 41.667 4.94 0.00 37.14 3.51
135 136 5.341872 TTGATTGGTTATTGCAAGGATGG 57.658 39.130 4.94 0.00 0.00 3.51
136 137 3.705579 TGATTGGTTATTGCAAGGATGGG 59.294 43.478 4.94 0.00 0.00 4.00
137 138 2.157640 TGGTTATTGCAAGGATGGGG 57.842 50.000 4.94 0.00 0.00 4.96
138 139 1.643286 TGGTTATTGCAAGGATGGGGA 59.357 47.619 4.94 0.00 0.00 4.81
139 140 2.310538 GGTTATTGCAAGGATGGGGAG 58.689 52.381 4.94 0.00 0.00 4.30
140 141 2.358195 GGTTATTGCAAGGATGGGGAGT 60.358 50.000 4.94 0.00 0.00 3.85
141 142 3.117663 GGTTATTGCAAGGATGGGGAGTA 60.118 47.826 4.94 0.00 0.00 2.59
142 143 2.736670 ATTGCAAGGATGGGGAGTAC 57.263 50.000 4.94 0.00 0.00 2.73
143 144 0.251916 TTGCAAGGATGGGGAGTACG 59.748 55.000 0.00 0.00 0.00 3.67
144 145 0.907704 TGCAAGGATGGGGAGTACGT 60.908 55.000 0.00 0.00 0.00 3.57
145 146 0.462047 GCAAGGATGGGGAGTACGTG 60.462 60.000 0.00 0.00 0.00 4.49
146 147 0.178068 CAAGGATGGGGAGTACGTGG 59.822 60.000 0.00 0.00 0.00 4.94
147 148 1.623542 AAGGATGGGGAGTACGTGGC 61.624 60.000 0.00 0.00 0.00 5.01
148 149 2.504519 GATGGGGAGTACGTGGCC 59.495 66.667 0.00 0.00 0.00 5.36
149 150 3.087906 ATGGGGAGTACGTGGCCC 61.088 66.667 12.30 12.30 41.28 5.80
150 151 3.635869 ATGGGGAGTACGTGGCCCT 62.636 63.158 18.00 0.00 41.72 5.19
151 152 3.007323 GGGGAGTACGTGGCCCTT 61.007 66.667 18.00 0.00 41.72 3.95
152 153 2.267961 GGGAGTACGTGGCCCTTG 59.732 66.667 13.17 0.00 38.85 3.61
153 154 2.590114 GGGAGTACGTGGCCCTTGT 61.590 63.158 13.17 0.00 38.85 3.16
154 155 1.259840 GGGAGTACGTGGCCCTTGTA 61.260 60.000 13.17 0.00 38.85 2.41
155 156 0.828677 GGAGTACGTGGCCCTTGTAT 59.171 55.000 0.00 0.00 0.00 2.29
156 157 2.034124 GGAGTACGTGGCCCTTGTATA 58.966 52.381 0.00 0.00 0.00 1.47
157 158 2.631545 GGAGTACGTGGCCCTTGTATAT 59.368 50.000 0.00 0.00 0.00 0.86
158 159 3.554337 GGAGTACGTGGCCCTTGTATATG 60.554 52.174 0.00 0.00 0.00 1.78
159 160 3.302161 AGTACGTGGCCCTTGTATATGA 58.698 45.455 0.00 0.00 0.00 2.15
160 161 2.910688 ACGTGGCCCTTGTATATGAG 57.089 50.000 0.00 0.00 0.00 2.90
161 162 2.116238 ACGTGGCCCTTGTATATGAGT 58.884 47.619 0.00 0.00 0.00 3.41
162 163 3.302161 ACGTGGCCCTTGTATATGAGTA 58.698 45.455 0.00 0.00 0.00 2.59
163 164 3.901844 ACGTGGCCCTTGTATATGAGTAT 59.098 43.478 0.00 0.00 0.00 2.12
164 165 5.081728 ACGTGGCCCTTGTATATGAGTATA 58.918 41.667 0.00 0.00 0.00 1.47
165 166 5.720041 ACGTGGCCCTTGTATATGAGTATAT 59.280 40.000 0.00 0.00 34.04 0.86
166 167 6.042777 CGTGGCCCTTGTATATGAGTATATG 58.957 44.000 0.00 0.00 31.97 1.78
167 168 6.351033 CGTGGCCCTTGTATATGAGTATATGT 60.351 42.308 0.00 0.00 31.97 2.29
168 169 7.042335 GTGGCCCTTGTATATGAGTATATGTC 58.958 42.308 0.00 0.00 31.97 3.06
169 170 6.156256 TGGCCCTTGTATATGAGTATATGTCC 59.844 42.308 0.00 0.00 31.97 4.02
170 171 6.273825 GCCCTTGTATATGAGTATATGTCCG 58.726 44.000 0.00 0.00 31.97 4.79
171 172 6.096423 GCCCTTGTATATGAGTATATGTCCGA 59.904 42.308 0.00 0.00 31.97 4.55
172 173 7.363530 GCCCTTGTATATGAGTATATGTCCGAA 60.364 40.741 0.00 0.00 31.97 4.30
173 174 8.191446 CCCTTGTATATGAGTATATGTCCGAAG 58.809 40.741 0.00 0.00 31.97 3.79
174 175 8.191446 CCTTGTATATGAGTATATGTCCGAAGG 58.809 40.741 0.00 0.00 38.73 3.46
175 176 8.873186 TTGTATATGAGTATATGTCCGAAGGA 57.127 34.615 0.00 0.00 41.59 3.36
176 177 8.507524 TGTATATGAGTATATGTCCGAAGGAG 57.492 38.462 0.00 0.00 43.12 3.69
196 197 5.407407 GAGACCTCCAACATAAACTCAGA 57.593 43.478 0.00 0.00 0.00 3.27
197 198 5.413309 AGACCTCCAACATAAACTCAGAG 57.587 43.478 0.00 0.00 0.00 3.35
198 199 4.223923 AGACCTCCAACATAAACTCAGAGG 59.776 45.833 1.53 0.00 44.06 3.69
199 200 3.910627 ACCTCCAACATAAACTCAGAGGT 59.089 43.478 1.53 3.00 45.97 3.85
200 201 4.508662 CCTCCAACATAAACTCAGAGGTC 58.491 47.826 1.53 0.00 35.70 3.85
201 202 4.020218 CCTCCAACATAAACTCAGAGGTCA 60.020 45.833 1.53 0.00 35.70 4.02
202 203 5.338708 CCTCCAACATAAACTCAGAGGTCAT 60.339 44.000 1.53 0.00 35.70 3.06
203 204 6.126863 TCCAACATAAACTCAGAGGTCATT 57.873 37.500 1.53 0.00 0.00 2.57
204 205 6.542821 TCCAACATAAACTCAGAGGTCATTT 58.457 36.000 1.53 0.00 0.00 2.32
205 206 6.655003 TCCAACATAAACTCAGAGGTCATTTC 59.345 38.462 1.53 0.00 0.00 2.17
206 207 6.430925 CCAACATAAACTCAGAGGTCATTTCA 59.569 38.462 1.53 0.00 0.00 2.69
207 208 7.040478 CCAACATAAACTCAGAGGTCATTTCAA 60.040 37.037 1.53 0.00 0.00 2.69
208 209 7.440523 ACATAAACTCAGAGGTCATTTCAAC 57.559 36.000 1.53 0.00 0.00 3.18
209 210 7.227156 ACATAAACTCAGAGGTCATTTCAACT 58.773 34.615 1.53 0.00 0.00 3.16
210 211 7.389053 ACATAAACTCAGAGGTCATTTCAACTC 59.611 37.037 1.53 0.00 0.00 3.01
211 212 5.559148 AACTCAGAGGTCATTTCAACTCT 57.441 39.130 1.53 0.00 40.72 3.24
212 213 6.672266 AACTCAGAGGTCATTTCAACTCTA 57.328 37.500 1.53 0.00 38.18 2.43
213 214 6.279513 ACTCAGAGGTCATTTCAACTCTAG 57.720 41.667 1.53 0.00 38.18 2.43
214 215 5.186797 ACTCAGAGGTCATTTCAACTCTAGG 59.813 44.000 1.53 0.00 38.18 3.02
215 216 5.333581 TCAGAGGTCATTTCAACTCTAGGA 58.666 41.667 0.00 0.00 38.18 2.94
216 217 5.420421 TCAGAGGTCATTTCAACTCTAGGAG 59.580 44.000 0.00 0.00 38.18 3.69
217 218 4.161377 AGAGGTCATTTCAACTCTAGGAGC 59.839 45.833 0.00 0.00 38.46 4.70
218 219 3.840666 AGGTCATTTCAACTCTAGGAGCA 59.159 43.478 0.00 0.00 32.04 4.26
219 220 4.472833 AGGTCATTTCAACTCTAGGAGCAT 59.527 41.667 0.00 0.00 32.04 3.79
220 221 5.045286 AGGTCATTTCAACTCTAGGAGCATT 60.045 40.000 0.00 0.00 32.04 3.56
221 222 5.649831 GGTCATTTCAACTCTAGGAGCATTT 59.350 40.000 0.00 0.00 32.04 2.32
222 223 6.404074 GGTCATTTCAACTCTAGGAGCATTTG 60.404 42.308 0.00 0.00 32.04 2.32
223 224 5.649395 TCATTTCAACTCTAGGAGCATTTGG 59.351 40.000 0.00 0.00 32.04 3.28
224 225 4.908601 TTCAACTCTAGGAGCATTTGGA 57.091 40.909 0.00 0.00 32.04 3.53
225 226 4.908601 TCAACTCTAGGAGCATTTGGAA 57.091 40.909 0.00 0.00 32.04 3.53
226 227 5.441718 TCAACTCTAGGAGCATTTGGAAT 57.558 39.130 0.00 0.00 32.04 3.01
227 228 5.431765 TCAACTCTAGGAGCATTTGGAATC 58.568 41.667 0.00 0.00 32.04 2.52
228 229 5.190528 TCAACTCTAGGAGCATTTGGAATCT 59.809 40.000 0.00 0.00 32.04 2.40
229 230 5.289083 ACTCTAGGAGCATTTGGAATCTC 57.711 43.478 0.00 0.00 32.04 2.75
230 231 4.102367 ACTCTAGGAGCATTTGGAATCTCC 59.898 45.833 0.00 0.00 44.09 3.71
231 232 4.040047 TCTAGGAGCATTTGGAATCTCCA 58.960 43.478 9.47 0.00 46.61 3.86
232 233 7.609569 ACTCTAGGAGCATTTGGAATCTCCAT 61.610 42.308 9.47 0.00 45.69 3.41
233 234 9.013910 ACTCTAGGAGCATTTGGAATCTCCATT 62.014 40.741 9.47 0.00 45.69 3.16
243 244 5.982890 TGGAATCTCCATTTTCAAGTTCC 57.017 39.130 0.00 0.00 42.67 3.62
244 245 4.772100 TGGAATCTCCATTTTCAAGTTCCC 59.228 41.667 0.00 0.00 42.67 3.97
245 246 4.160439 GGAATCTCCATTTTCAAGTTCCCC 59.840 45.833 0.00 0.00 36.28 4.81
246 247 3.893753 TCTCCATTTTCAAGTTCCCCA 57.106 42.857 0.00 0.00 0.00 4.96
247 248 4.191804 TCTCCATTTTCAAGTTCCCCAA 57.808 40.909 0.00 0.00 0.00 4.12
248 249 4.750941 TCTCCATTTTCAAGTTCCCCAAT 58.249 39.130 0.00 0.00 0.00 3.16
249 250 4.527816 TCTCCATTTTCAAGTTCCCCAATG 59.472 41.667 0.00 0.00 0.00 2.82
250 251 3.007831 TCCATTTTCAAGTTCCCCAATGC 59.992 43.478 0.00 0.00 0.00 3.56
251 252 3.008266 CCATTTTCAAGTTCCCCAATGCT 59.992 43.478 0.00 0.00 0.00 3.79
252 253 4.222588 CCATTTTCAAGTTCCCCAATGCTA 59.777 41.667 0.00 0.00 0.00 3.49
253 254 5.279910 CCATTTTCAAGTTCCCCAATGCTAA 60.280 40.000 0.00 0.00 0.00 3.09
254 255 4.864704 TTTCAAGTTCCCCAATGCTAAC 57.135 40.909 0.00 0.00 0.00 2.34
255 256 3.517296 TCAAGTTCCCCAATGCTAACA 57.483 42.857 0.00 0.00 0.00 2.41
256 257 3.153919 TCAAGTTCCCCAATGCTAACAC 58.846 45.455 0.00 0.00 0.00 3.32
257 258 3.157087 CAAGTTCCCCAATGCTAACACT 58.843 45.455 0.00 0.00 0.00 3.55
258 259 3.073274 AGTTCCCCAATGCTAACACTC 57.927 47.619 0.00 0.00 0.00 3.51
259 260 2.375174 AGTTCCCCAATGCTAACACTCA 59.625 45.455 0.00 0.00 0.00 3.41
260 261 2.488153 GTTCCCCAATGCTAACACTCAC 59.512 50.000 0.00 0.00 0.00 3.51
261 262 1.004277 TCCCCAATGCTAACACTCACC 59.996 52.381 0.00 0.00 0.00 4.02
262 263 1.271871 CCCCAATGCTAACACTCACCA 60.272 52.381 0.00 0.00 0.00 4.17
263 264 2.621407 CCCCAATGCTAACACTCACCAT 60.621 50.000 0.00 0.00 0.00 3.55
264 265 2.424601 CCCAATGCTAACACTCACCATG 59.575 50.000 0.00 0.00 0.00 3.66
265 266 3.084039 CCAATGCTAACACTCACCATGT 58.916 45.455 0.00 0.00 0.00 3.21
266 267 3.507233 CCAATGCTAACACTCACCATGTT 59.493 43.478 0.00 0.00 42.78 2.71
267 268 4.379813 CCAATGCTAACACTCACCATGTTC 60.380 45.833 0.00 0.00 40.68 3.18
268 269 3.769739 TGCTAACACTCACCATGTTCT 57.230 42.857 0.00 0.00 40.68 3.01
269 270 3.402110 TGCTAACACTCACCATGTTCTG 58.598 45.455 0.00 0.00 40.68 3.02
270 271 2.160417 GCTAACACTCACCATGTTCTGC 59.840 50.000 0.00 0.00 40.68 4.26
271 272 2.346766 AACACTCACCATGTTCTGCA 57.653 45.000 0.00 0.00 35.32 4.41
272 273 1.888215 ACACTCACCATGTTCTGCAG 58.112 50.000 7.63 7.63 0.00 4.41
273 274 1.162698 CACTCACCATGTTCTGCAGG 58.837 55.000 15.13 0.00 0.00 4.85
281 282 2.836262 CATGTTCTGCAGGGAGAGATC 58.164 52.381 15.13 0.00 0.00 2.75
282 283 1.942776 TGTTCTGCAGGGAGAGATCA 58.057 50.000 15.13 0.00 0.00 2.92
283 284 1.552337 TGTTCTGCAGGGAGAGATCAC 59.448 52.381 15.13 0.00 0.00 3.06
284 285 1.552337 GTTCTGCAGGGAGAGATCACA 59.448 52.381 15.13 0.00 0.00 3.58
285 286 1.942776 TCTGCAGGGAGAGATCACAA 58.057 50.000 15.13 0.00 0.00 3.33
286 287 2.475155 TCTGCAGGGAGAGATCACAAT 58.525 47.619 15.13 0.00 0.00 2.71
287 288 2.169978 TCTGCAGGGAGAGATCACAATG 59.830 50.000 15.13 0.00 0.00 2.82
288 289 2.169978 CTGCAGGGAGAGATCACAATGA 59.830 50.000 5.57 0.00 0.00 2.57
289 290 2.775960 TGCAGGGAGAGATCACAATGAT 59.224 45.455 0.00 0.00 40.34 2.45
290 291 3.139850 GCAGGGAGAGATCACAATGATG 58.860 50.000 0.00 0.00 37.20 3.07
291 292 3.741249 CAGGGAGAGATCACAATGATGG 58.259 50.000 0.00 0.00 37.20 3.51
292 293 3.390311 CAGGGAGAGATCACAATGATGGA 59.610 47.826 0.00 0.00 37.20 3.41
293 294 4.041815 CAGGGAGAGATCACAATGATGGAT 59.958 45.833 0.00 0.00 37.20 3.41
294 295 4.041815 AGGGAGAGATCACAATGATGGATG 59.958 45.833 0.00 0.00 37.20 3.51
295 296 4.202440 GGGAGAGATCACAATGATGGATGT 60.202 45.833 0.00 0.00 37.20 3.06
296 297 5.374921 GGAGAGATCACAATGATGGATGTT 58.625 41.667 0.00 0.00 37.20 2.71
297 298 5.826737 GGAGAGATCACAATGATGGATGTTT 59.173 40.000 0.00 0.00 37.20 2.83
298 299 6.994496 GGAGAGATCACAATGATGGATGTTTA 59.006 38.462 0.00 0.00 37.20 2.01
299 300 7.500227 GGAGAGATCACAATGATGGATGTTTAA 59.500 37.037 0.00 0.00 37.20 1.52
300 301 8.218338 AGAGATCACAATGATGGATGTTTAAC 57.782 34.615 0.00 0.00 37.20 2.01
301 302 7.284034 AGAGATCACAATGATGGATGTTTAACC 59.716 37.037 0.00 0.00 37.20 2.85
302 303 7.121382 AGATCACAATGATGGATGTTTAACCT 58.879 34.615 0.00 0.00 37.20 3.50
303 304 6.513806 TCACAATGATGGATGTTTAACCTG 57.486 37.500 0.00 0.00 0.00 4.00
304 305 5.418524 TCACAATGATGGATGTTTAACCTGG 59.581 40.000 0.00 0.00 0.00 4.45
305 306 5.418524 CACAATGATGGATGTTTAACCTGGA 59.581 40.000 0.00 0.00 0.00 3.86
306 307 5.653769 ACAATGATGGATGTTTAACCTGGAG 59.346 40.000 0.00 0.00 0.00 3.86
307 308 5.715439 ATGATGGATGTTTAACCTGGAGA 57.285 39.130 0.00 0.00 0.00 3.71
308 309 4.843728 TGATGGATGTTTAACCTGGAGAC 58.156 43.478 0.00 0.00 0.00 3.36
309 310 4.288366 TGATGGATGTTTAACCTGGAGACA 59.712 41.667 0.00 0.00 39.59 3.41
327 328 6.952773 GAGACAGAGACTCCATATTGTACT 57.047 41.667 0.00 0.00 0.00 2.73
328 329 6.707440 AGACAGAGACTCCATATTGTACTG 57.293 41.667 0.00 0.00 0.00 2.74
329 330 5.596361 AGACAGAGACTCCATATTGTACTGG 59.404 44.000 0.00 0.00 0.00 4.00
330 331 5.519808 ACAGAGACTCCATATTGTACTGGA 58.480 41.667 0.00 1.95 39.23 3.86
336 337 4.672587 TCCATATTGTACTGGAGTCTGC 57.327 45.455 0.00 0.00 36.63 4.26
337 338 3.068165 TCCATATTGTACTGGAGTCTGCG 59.932 47.826 0.00 0.00 36.63 5.18
338 339 2.579207 TATTGTACTGGAGTCTGCGC 57.421 50.000 0.00 0.00 0.00 6.09
339 340 0.608130 ATTGTACTGGAGTCTGCGCA 59.392 50.000 10.98 10.98 0.00 6.09
340 341 0.391228 TTGTACTGGAGTCTGCGCAA 59.609 50.000 13.05 0.00 0.00 4.85
341 342 0.038251 TGTACTGGAGTCTGCGCAAG 60.038 55.000 13.05 7.34 43.44 4.01
342 343 0.737715 GTACTGGAGTCTGCGCAAGG 60.738 60.000 13.05 0.00 38.28 3.61
343 344 1.185618 TACTGGAGTCTGCGCAAGGT 61.186 55.000 13.05 0.00 38.28 3.50
344 345 1.185618 ACTGGAGTCTGCGCAAGGTA 61.186 55.000 13.05 0.00 38.28 3.08
345 346 0.176680 CTGGAGTCTGCGCAAGGTAT 59.823 55.000 13.05 0.00 38.28 2.73
346 347 1.409064 CTGGAGTCTGCGCAAGGTATA 59.591 52.381 13.05 0.00 38.28 1.47
347 348 1.136305 TGGAGTCTGCGCAAGGTATAC 59.864 52.381 13.05 3.07 38.28 1.47
348 349 1.136305 GGAGTCTGCGCAAGGTATACA 59.864 52.381 13.05 0.00 38.28 2.29
349 350 2.194271 GAGTCTGCGCAAGGTATACAC 58.806 52.381 13.05 0.00 38.28 2.90
350 351 1.825474 AGTCTGCGCAAGGTATACACT 59.175 47.619 13.05 1.51 38.28 3.55
351 352 2.159226 AGTCTGCGCAAGGTATACACTC 60.159 50.000 13.05 0.00 38.28 3.51
352 353 2.100197 TCTGCGCAAGGTATACACTCT 58.900 47.619 13.05 0.00 38.28 3.24
353 354 2.496070 TCTGCGCAAGGTATACACTCTT 59.504 45.455 13.05 0.00 38.28 2.85
354 355 2.860735 CTGCGCAAGGTATACACTCTTC 59.139 50.000 13.05 0.00 38.28 2.87
355 356 2.496070 TGCGCAAGGTATACACTCTTCT 59.504 45.455 8.16 0.00 38.28 2.85
356 357 2.860735 GCGCAAGGTATACACTCTTCTG 59.139 50.000 0.30 0.00 38.28 3.02
357 358 3.448686 CGCAAGGTATACACTCTTCTGG 58.551 50.000 5.01 0.00 0.00 3.86
358 359 3.119101 CGCAAGGTATACACTCTTCTGGT 60.119 47.826 5.01 0.00 0.00 4.00
359 360 4.620803 CGCAAGGTATACACTCTTCTGGTT 60.621 45.833 5.01 0.00 0.00 3.67
360 361 5.246307 GCAAGGTATACACTCTTCTGGTTT 58.754 41.667 5.01 0.00 0.00 3.27
361 362 5.122396 GCAAGGTATACACTCTTCTGGTTTG 59.878 44.000 5.01 0.00 0.00 2.93
362 363 5.422214 AGGTATACACTCTTCTGGTTTGG 57.578 43.478 5.01 0.00 0.00 3.28
363 364 5.091552 AGGTATACACTCTTCTGGTTTGGA 58.908 41.667 5.01 0.00 0.00 3.53
364 365 5.726793 AGGTATACACTCTTCTGGTTTGGAT 59.273 40.000 5.01 0.00 0.00 3.41
365 366 6.215636 AGGTATACACTCTTCTGGTTTGGATT 59.784 38.462 5.01 0.00 0.00 3.01
366 367 7.402071 AGGTATACACTCTTCTGGTTTGGATTA 59.598 37.037 5.01 0.00 0.00 1.75
367 368 8.211629 GGTATACACTCTTCTGGTTTGGATTAT 58.788 37.037 5.01 0.00 0.00 1.28
368 369 9.046296 GTATACACTCTTCTGGTTTGGATTATG 57.954 37.037 0.00 0.00 0.00 1.90
369 370 5.880901 ACACTCTTCTGGTTTGGATTATGT 58.119 37.500 0.00 0.00 0.00 2.29
370 371 6.306987 ACACTCTTCTGGTTTGGATTATGTT 58.693 36.000 0.00 0.00 0.00 2.71
371 372 7.458397 ACACTCTTCTGGTTTGGATTATGTTA 58.542 34.615 0.00 0.00 0.00 2.41
372 373 8.109634 ACACTCTTCTGGTTTGGATTATGTTAT 58.890 33.333 0.00 0.00 0.00 1.89
373 374 8.616076 CACTCTTCTGGTTTGGATTATGTTATC 58.384 37.037 0.00 0.00 0.00 1.75
374 375 7.775561 ACTCTTCTGGTTTGGATTATGTTATCC 59.224 37.037 0.00 0.00 43.68 2.59
375 376 7.060421 TCTTCTGGTTTGGATTATGTTATCCC 58.940 38.462 0.00 0.00 42.91 3.85
376 377 6.334378 TCTGGTTTGGATTATGTTATCCCA 57.666 37.500 0.00 0.00 42.91 4.37
377 378 6.921412 TCTGGTTTGGATTATGTTATCCCAT 58.079 36.000 0.00 0.00 42.91 4.00
378 379 7.004086 TCTGGTTTGGATTATGTTATCCCATC 58.996 38.462 0.00 0.00 42.91 3.51
379 380 6.677552 TGGTTTGGATTATGTTATCCCATCA 58.322 36.000 0.00 0.00 42.91 3.07
380 381 7.304479 TGGTTTGGATTATGTTATCCCATCAT 58.696 34.615 0.00 0.00 42.91 2.45
381 382 7.788867 TGGTTTGGATTATGTTATCCCATCATT 59.211 33.333 0.00 0.00 42.91 2.57
382 383 8.650490 GGTTTGGATTATGTTATCCCATCATTT 58.350 33.333 0.00 0.00 42.91 2.32
383 384 9.480053 GTTTGGATTATGTTATCCCATCATTTG 57.520 33.333 0.00 0.00 42.91 2.32
384 385 8.780616 TTGGATTATGTTATCCCATCATTTGT 57.219 30.769 0.00 0.00 42.91 2.83
385 386 8.780616 TGGATTATGTTATCCCATCATTTGTT 57.219 30.769 0.00 0.00 42.91 2.83
386 387 8.640651 TGGATTATGTTATCCCATCATTTGTTG 58.359 33.333 0.00 0.00 42.91 3.33
387 388 7.599998 GGATTATGTTATCCCATCATTTGTTGC 59.400 37.037 0.00 0.00 38.53 4.17
388 389 7.658525 TTATGTTATCCCATCATTTGTTGCT 57.341 32.000 0.00 0.00 0.00 3.91
389 390 5.999205 TGTTATCCCATCATTTGTTGCTT 57.001 34.783 0.00 0.00 0.00 3.91
390 391 6.357579 TGTTATCCCATCATTTGTTGCTTT 57.642 33.333 0.00 0.00 0.00 3.51
391 392 6.767456 TGTTATCCCATCATTTGTTGCTTTT 58.233 32.000 0.00 0.00 0.00 2.27
392 393 6.649973 TGTTATCCCATCATTTGTTGCTTTTG 59.350 34.615 0.00 0.00 0.00 2.44
393 394 4.005487 TCCCATCATTTGTTGCTTTTGG 57.995 40.909 0.00 0.00 0.00 3.28
394 395 3.390639 TCCCATCATTTGTTGCTTTTGGT 59.609 39.130 0.00 0.00 0.00 3.67
395 396 3.747529 CCCATCATTTGTTGCTTTTGGTC 59.252 43.478 0.00 0.00 0.00 4.02
396 397 4.503643 CCCATCATTTGTTGCTTTTGGTCT 60.504 41.667 0.00 0.00 0.00 3.85
397 398 4.687483 CCATCATTTGTTGCTTTTGGTCTC 59.313 41.667 0.00 0.00 0.00 3.36
398 399 5.510179 CCATCATTTGTTGCTTTTGGTCTCT 60.510 40.000 0.00 0.00 0.00 3.10
399 400 6.294675 CCATCATTTGTTGCTTTTGGTCTCTA 60.295 38.462 0.00 0.00 0.00 2.43
400 401 6.317789 TCATTTGTTGCTTTTGGTCTCTAG 57.682 37.500 0.00 0.00 0.00 2.43
401 402 5.241506 TCATTTGTTGCTTTTGGTCTCTAGG 59.758 40.000 0.00 0.00 0.00 3.02
402 403 4.431416 TTGTTGCTTTTGGTCTCTAGGA 57.569 40.909 0.00 0.00 0.00 2.94
403 404 4.431416 TGTTGCTTTTGGTCTCTAGGAA 57.569 40.909 0.00 0.00 0.00 3.36
404 405 4.985538 TGTTGCTTTTGGTCTCTAGGAAT 58.014 39.130 0.00 0.00 0.00 3.01
405 406 5.385198 TGTTGCTTTTGGTCTCTAGGAATT 58.615 37.500 0.00 0.00 0.00 2.17
406 407 5.833131 TGTTGCTTTTGGTCTCTAGGAATTT 59.167 36.000 0.00 0.00 0.00 1.82
407 408 5.964958 TGCTTTTGGTCTCTAGGAATTTG 57.035 39.130 0.00 0.00 0.00 2.32
408 409 4.218417 TGCTTTTGGTCTCTAGGAATTTGC 59.782 41.667 0.00 0.00 0.00 3.68
409 410 4.218417 GCTTTTGGTCTCTAGGAATTTGCA 59.782 41.667 0.00 0.00 0.00 4.08
410 411 5.105595 GCTTTTGGTCTCTAGGAATTTGCAT 60.106 40.000 0.00 0.00 0.00 3.96
411 412 5.902613 TTTGGTCTCTAGGAATTTGCATG 57.097 39.130 0.00 0.00 0.00 4.06
412 413 3.282021 TGGTCTCTAGGAATTTGCATGC 58.718 45.455 11.82 11.82 0.00 4.06
413 414 3.054139 TGGTCTCTAGGAATTTGCATGCT 60.054 43.478 20.33 0.00 0.00 3.79
414 415 4.164030 TGGTCTCTAGGAATTTGCATGCTA 59.836 41.667 20.33 8.83 0.00 3.49
415 416 4.754114 GGTCTCTAGGAATTTGCATGCTAG 59.246 45.833 20.33 10.20 39.42 3.42
416 417 4.213059 GTCTCTAGGAATTTGCATGCTAGC 59.787 45.833 20.33 8.10 38.35 3.42
417 418 4.132336 CTCTAGGAATTTGCATGCTAGCA 58.868 43.478 21.85 21.85 43.99 3.49
418 419 3.879295 TCTAGGAATTTGCATGCTAGCAC 59.121 43.478 22.07 9.17 45.61 4.40
419 420 2.449464 AGGAATTTGCATGCTAGCACA 58.551 42.857 22.07 12.11 45.61 4.57
420 421 3.028850 AGGAATTTGCATGCTAGCACAT 58.971 40.909 22.07 1.24 45.61 3.21
427 428 2.034104 CATGCTAGCACATGTGGAGT 57.966 50.000 26.55 0.00 42.05 3.85
428 429 3.183793 CATGCTAGCACATGTGGAGTA 57.816 47.619 26.55 3.24 42.05 2.59
429 430 2.967599 TGCTAGCACATGTGGAGTAG 57.032 50.000 26.55 12.27 0.00 2.57
430 431 1.134699 TGCTAGCACATGTGGAGTAGC 60.135 52.381 26.55 19.45 34.69 3.58
431 432 1.808133 GCTAGCACATGTGGAGTAGCC 60.808 57.143 26.55 8.50 37.10 3.93
432 433 1.482182 CTAGCACATGTGGAGTAGCCA 59.518 52.381 26.55 0.00 46.96 4.75
442 443 3.003394 TGGAGTAGCCAATGTCAATGG 57.997 47.619 2.20 2.20 45.87 3.16
443 444 2.308570 TGGAGTAGCCAATGTCAATGGT 59.691 45.455 8.73 0.00 45.87 3.55
444 445 3.521531 TGGAGTAGCCAATGTCAATGGTA 59.478 43.478 8.73 0.00 45.87 3.25
445 446 4.165950 TGGAGTAGCCAATGTCAATGGTAT 59.834 41.667 8.73 1.04 45.87 2.73
446 447 4.516698 GGAGTAGCCAATGTCAATGGTATG 59.483 45.833 8.73 0.00 40.23 2.39
447 448 5.368145 GAGTAGCCAATGTCAATGGTATGA 58.632 41.667 8.73 0.00 40.23 2.15
448 449 5.945310 AGTAGCCAATGTCAATGGTATGAT 58.055 37.500 8.73 0.00 40.23 2.45
449 450 5.766670 AGTAGCCAATGTCAATGGTATGATG 59.233 40.000 8.73 0.00 40.23 3.07
450 451 4.539726 AGCCAATGTCAATGGTATGATGT 58.460 39.130 8.73 0.00 40.23 3.06
451 452 4.340097 AGCCAATGTCAATGGTATGATGTG 59.660 41.667 8.73 0.00 40.23 3.21
452 453 4.613944 CCAATGTCAATGGTATGATGTGC 58.386 43.478 0.00 0.00 33.08 4.57
453 454 4.098196 CCAATGTCAATGGTATGATGTGCA 59.902 41.667 0.00 0.00 33.08 4.57
454 455 5.221362 CCAATGTCAATGGTATGATGTGCAT 60.221 40.000 0.00 0.00 41.08 3.96
455 456 4.904253 TGTCAATGGTATGATGTGCATG 57.096 40.909 0.00 0.00 37.87 4.06
456 457 3.067040 TGTCAATGGTATGATGTGCATGC 59.933 43.478 11.82 11.82 37.87 4.06
457 458 3.067040 GTCAATGGTATGATGTGCATGCA 59.933 43.478 18.46 18.46 40.88 3.96
458 459 3.316868 TCAATGGTATGATGTGCATGCAG 59.683 43.478 23.41 4.37 40.88 4.41
459 460 1.682740 TGGTATGATGTGCATGCAGG 58.317 50.000 23.41 0.00 40.88 4.85
460 461 0.956633 GGTATGATGTGCATGCAGGG 59.043 55.000 23.41 0.00 40.88 4.45
461 462 0.313043 GTATGATGTGCATGCAGGGC 59.687 55.000 23.41 13.42 39.17 5.19
462 463 0.184211 TATGATGTGCATGCAGGGCT 59.816 50.000 23.41 5.73 37.87 5.19
463 464 1.107538 ATGATGTGCATGCAGGGCTC 61.108 55.000 23.41 15.20 35.42 4.70
464 465 2.827190 ATGTGCATGCAGGGCTCG 60.827 61.111 23.41 0.00 0.00 5.03
465 466 3.333899 ATGTGCATGCAGGGCTCGA 62.334 57.895 23.41 0.00 0.00 4.04
466 467 3.200593 GTGCATGCAGGGCTCGAG 61.201 66.667 23.41 8.45 0.00 4.04
467 468 3.709633 TGCATGCAGGGCTCGAGT 61.710 61.111 18.46 0.00 0.00 4.18
468 469 2.358372 TGCATGCAGGGCTCGAGTA 61.358 57.895 18.46 0.00 0.00 2.59
469 470 1.070445 GCATGCAGGGCTCGAGTAT 59.930 57.895 14.21 0.00 0.00 2.12
470 471 0.948141 GCATGCAGGGCTCGAGTATC 60.948 60.000 14.21 4.23 0.00 2.24
471 472 0.678395 CATGCAGGGCTCGAGTATCT 59.322 55.000 15.13 6.40 0.00 1.98
472 473 0.678395 ATGCAGGGCTCGAGTATCTG 59.322 55.000 15.13 18.16 0.00 2.90
473 474 1.300542 GCAGGGCTCGAGTATCTGC 60.301 63.158 27.34 27.34 42.89 4.26
474 475 2.021068 GCAGGGCTCGAGTATCTGCA 62.021 60.000 31.77 0.00 46.92 4.41
475 476 0.249238 CAGGGCTCGAGTATCTGCAC 60.249 60.000 15.13 0.00 36.21 4.57
476 477 0.684479 AGGGCTCGAGTATCTGCACA 60.684 55.000 15.13 0.00 37.94 4.57
477 478 0.175760 GGGCTCGAGTATCTGCACAA 59.824 55.000 15.13 0.00 36.05 3.33
478 479 1.565305 GGCTCGAGTATCTGCACAAG 58.435 55.000 15.13 0.00 34.68 3.16
479 480 1.565305 GCTCGAGTATCTGCACAAGG 58.435 55.000 15.13 0.00 33.54 3.61
480 481 1.565305 CTCGAGTATCTGCACAAGGC 58.435 55.000 3.62 0.00 45.13 4.35
496 497 3.111038 GCATGTAGCCCGCCTTTC 58.889 61.111 0.00 0.00 37.23 2.62
497 498 1.748879 GCATGTAGCCCGCCTTTCA 60.749 57.895 0.00 0.00 37.23 2.69
498 499 1.103398 GCATGTAGCCCGCCTTTCAT 61.103 55.000 0.00 0.00 37.23 2.57
499 500 1.813862 GCATGTAGCCCGCCTTTCATA 60.814 52.381 0.00 0.00 37.23 2.15
500 501 1.873591 CATGTAGCCCGCCTTTCATAC 59.126 52.381 0.00 0.00 0.00 2.39
501 502 0.906066 TGTAGCCCGCCTTTCATACA 59.094 50.000 0.00 0.00 0.00 2.29
502 503 1.296727 GTAGCCCGCCTTTCATACAC 58.703 55.000 0.00 0.00 0.00 2.90
503 504 0.179468 TAGCCCGCCTTTCATACACC 59.821 55.000 0.00 0.00 0.00 4.16
504 505 2.469516 GCCCGCCTTTCATACACCG 61.470 63.158 0.00 0.00 0.00 4.94
505 506 1.817941 CCCGCCTTTCATACACCGG 60.818 63.158 0.00 0.00 35.74 5.28
506 507 1.817941 CCGCCTTTCATACACCGGG 60.818 63.158 6.32 0.00 32.58 5.73
507 508 1.219664 CGCCTTTCATACACCGGGA 59.780 57.895 6.32 0.00 0.00 5.14
508 509 0.179056 CGCCTTTCATACACCGGGAT 60.179 55.000 6.32 0.00 0.00 3.85
509 510 1.308998 GCCTTTCATACACCGGGATG 58.691 55.000 6.32 6.67 0.00 3.51
510 511 1.408266 GCCTTTCATACACCGGGATGT 60.408 52.381 6.32 4.34 36.56 3.06
511 512 2.288666 CCTTTCATACACCGGGATGTG 58.711 52.381 6.32 1.48 42.05 3.21
512 513 2.093181 CCTTTCATACACCGGGATGTGA 60.093 50.000 6.32 4.29 39.57 3.58
513 514 3.605634 CTTTCATACACCGGGATGTGAA 58.394 45.455 6.32 10.79 39.57 3.18
514 515 2.979814 TCATACACCGGGATGTGAAG 57.020 50.000 6.32 0.00 39.57 3.02
515 516 2.462723 TCATACACCGGGATGTGAAGA 58.537 47.619 6.32 0.00 39.57 2.87
516 517 2.167693 TCATACACCGGGATGTGAAGAC 59.832 50.000 6.32 0.00 39.57 3.01
517 518 0.528924 TACACCGGGATGTGAAGACG 59.471 55.000 6.32 0.00 39.57 4.18
518 519 1.292223 CACCGGGATGTGAAGACGT 59.708 57.895 6.32 0.00 38.55 4.34
519 520 0.736325 CACCGGGATGTGAAGACGTC 60.736 60.000 7.70 7.70 38.55 4.34
520 521 1.183030 ACCGGGATGTGAAGACGTCA 61.183 55.000 19.50 0.00 39.57 4.35
521 522 0.037697 CCGGGATGTGAAGACGTCAA 60.038 55.000 19.50 0.00 39.57 3.18
522 523 1.606994 CCGGGATGTGAAGACGTCAAA 60.607 52.381 19.50 0.00 39.57 2.69
523 524 1.459592 CGGGATGTGAAGACGTCAAAC 59.540 52.381 19.50 12.81 39.57 2.93
524 525 2.489971 GGGATGTGAAGACGTCAAACA 58.510 47.619 19.50 17.94 39.57 2.83
525 526 3.074412 GGGATGTGAAGACGTCAAACAT 58.926 45.455 22.80 22.80 39.57 2.71
526 527 3.125316 GGGATGTGAAGACGTCAAACATC 59.875 47.826 30.49 30.49 39.57 3.06
527 528 3.125316 GGATGTGAAGACGTCAAACATCC 59.875 47.826 35.72 35.72 45.49 3.51
528 529 3.469008 TGTGAAGACGTCAAACATCCT 57.531 42.857 19.50 0.00 38.23 3.24
529 530 4.594123 TGTGAAGACGTCAAACATCCTA 57.406 40.909 19.50 1.24 38.23 2.94
530 531 4.304110 TGTGAAGACGTCAAACATCCTAC 58.696 43.478 19.50 4.15 38.23 3.18
531 532 4.038763 TGTGAAGACGTCAAACATCCTACT 59.961 41.667 19.50 0.00 38.23 2.57
532 533 4.386049 GTGAAGACGTCAAACATCCTACTG 59.614 45.833 19.50 0.00 38.23 2.74
533 534 3.594603 AGACGTCAAACATCCTACTGG 57.405 47.619 19.50 0.00 0.00 4.00
534 535 6.732349 TGAAGACGTCAAACATCCTACTGGA 61.732 44.000 19.50 0.00 39.10 3.86
535 536 7.976982 TGAAGACGTCAAACATCCTACTGGAT 61.977 42.308 19.50 0.00 42.91 3.41
549 550 5.590259 TCCTACTGGATGCAAATCTAAAAGC 59.410 40.000 0.00 0.00 37.46 3.51
550 551 5.591877 CCTACTGGATGCAAATCTAAAAGCT 59.408 40.000 0.00 0.00 34.57 3.74
551 552 6.767902 CCTACTGGATGCAAATCTAAAAGCTA 59.232 38.462 0.00 0.00 34.57 3.32
552 553 7.283127 CCTACTGGATGCAAATCTAAAAGCTAA 59.717 37.037 0.00 0.00 34.57 3.09
553 554 7.093322 ACTGGATGCAAATCTAAAAGCTAAG 57.907 36.000 0.00 0.00 0.00 2.18
554 555 6.096001 ACTGGATGCAAATCTAAAAGCTAAGG 59.904 38.462 0.00 0.00 0.00 2.69
555 556 5.951747 TGGATGCAAATCTAAAAGCTAAGGT 59.048 36.000 0.00 0.00 0.00 3.50
556 557 6.437162 TGGATGCAAATCTAAAAGCTAAGGTT 59.563 34.615 0.00 0.00 0.00 3.50
557 558 6.753744 GGATGCAAATCTAAAAGCTAAGGTTG 59.246 38.462 0.00 0.00 0.00 3.77
558 559 5.469479 TGCAAATCTAAAAGCTAAGGTTGC 58.531 37.500 16.98 16.98 36.00 4.17
559 560 5.243730 TGCAAATCTAAAAGCTAAGGTTGCT 59.756 36.000 20.57 0.00 43.32 3.91
560 561 5.574443 GCAAATCTAAAAGCTAAGGTTGCTG 59.426 40.000 16.76 5.52 41.03 4.41
561 562 6.570378 GCAAATCTAAAAGCTAAGGTTGCTGA 60.570 38.462 16.76 0.00 41.03 4.26
562 563 7.542025 CAAATCTAAAAGCTAAGGTTGCTGAT 58.458 34.615 0.00 0.00 41.03 2.90
563 564 7.709149 AATCTAAAAGCTAAGGTTGCTGATT 57.291 32.000 0.00 0.00 41.03 2.57
564 565 7.709149 ATCTAAAAGCTAAGGTTGCTGATTT 57.291 32.000 0.00 0.00 41.03 2.17
565 566 7.524717 TCTAAAAGCTAAGGTTGCTGATTTT 57.475 32.000 0.00 0.00 41.03 1.82
566 567 7.370383 TCTAAAAGCTAAGGTTGCTGATTTTG 58.630 34.615 0.00 0.00 41.03 2.44
567 568 4.525912 AAGCTAAGGTTGCTGATTTTGG 57.474 40.909 0.00 0.00 41.03 3.28
568 569 2.232208 AGCTAAGGTTGCTGATTTTGGC 59.768 45.455 0.00 0.00 39.56 4.52
569 570 2.232208 GCTAAGGTTGCTGATTTTGGCT 59.768 45.455 0.00 0.00 0.00 4.75
570 571 3.306294 GCTAAGGTTGCTGATTTTGGCTT 60.306 43.478 0.00 0.00 0.00 4.35
571 572 2.825861 AGGTTGCTGATTTTGGCTTG 57.174 45.000 0.00 0.00 0.00 4.01
572 573 2.318908 AGGTTGCTGATTTTGGCTTGA 58.681 42.857 0.00 0.00 0.00 3.02
573 574 2.901839 AGGTTGCTGATTTTGGCTTGAT 59.098 40.909 0.00 0.00 0.00 2.57
574 575 2.997986 GGTTGCTGATTTTGGCTTGATG 59.002 45.455 0.00 0.00 0.00 3.07
575 576 3.306225 GGTTGCTGATTTTGGCTTGATGA 60.306 43.478 0.00 0.00 0.00 2.92
576 577 4.309099 GTTGCTGATTTTGGCTTGATGAA 58.691 39.130 0.00 0.00 0.00 2.57
577 578 4.182693 TGCTGATTTTGGCTTGATGAAG 57.817 40.909 0.00 0.00 0.00 3.02
578 579 3.056393 TGCTGATTTTGGCTTGATGAAGG 60.056 43.478 0.00 0.00 0.00 3.46
588 589 4.445452 GCTTGATGAAGGCTTTCAATCA 57.555 40.909 15.81 15.28 45.82 2.57
589 590 4.421948 GCTTGATGAAGGCTTTCAATCAG 58.578 43.478 15.81 11.64 45.82 2.90
590 591 4.677250 GCTTGATGAAGGCTTTCAATCAGG 60.677 45.833 15.81 17.84 45.82 3.86
591 592 4.305539 TGATGAAGGCTTTCAATCAGGA 57.694 40.909 15.81 0.00 45.82 3.86
592 593 4.012374 TGATGAAGGCTTTCAATCAGGAC 58.988 43.478 15.81 2.77 45.82 3.85
593 594 2.426522 TGAAGGCTTTCAATCAGGACG 58.573 47.619 9.07 0.00 40.26 4.79
594 595 1.740025 GAAGGCTTTCAATCAGGACGG 59.260 52.381 0.00 0.00 33.38 4.79
595 596 0.693049 AGGCTTTCAATCAGGACGGT 59.307 50.000 0.00 0.00 0.00 4.83
596 597 0.804989 GGCTTTCAATCAGGACGGTG 59.195 55.000 0.00 0.00 0.00 4.94
597 598 1.610624 GGCTTTCAATCAGGACGGTGA 60.611 52.381 0.00 0.00 0.00 4.02
598 599 2.359900 GCTTTCAATCAGGACGGTGAT 58.640 47.619 0.00 0.00 38.91 3.06
599 600 3.531538 GCTTTCAATCAGGACGGTGATA 58.468 45.455 0.00 0.00 36.07 2.15
600 601 3.309954 GCTTTCAATCAGGACGGTGATAC 59.690 47.826 0.00 0.00 36.07 2.24
601 602 3.536956 TTCAATCAGGACGGTGATACC 57.463 47.619 0.00 0.00 36.07 2.73
602 603 1.760613 TCAATCAGGACGGTGATACCC 59.239 52.381 0.00 0.00 36.07 3.69
603 604 1.484653 CAATCAGGACGGTGATACCCA 59.515 52.381 0.00 0.00 36.07 4.51
604 605 2.103153 ATCAGGACGGTGATACCCAT 57.897 50.000 0.00 0.00 35.30 4.00
605 606 1.119684 TCAGGACGGTGATACCCATG 58.880 55.000 0.00 0.00 33.75 3.66
606 607 0.830648 CAGGACGGTGATACCCATGT 59.169 55.000 0.00 0.00 33.75 3.21
607 608 2.036387 CAGGACGGTGATACCCATGTA 58.964 52.381 0.00 0.00 33.75 2.29
608 609 2.632996 CAGGACGGTGATACCCATGTAT 59.367 50.000 0.00 0.00 40.41 2.29
616 617 3.059352 GATACCCATGTATCCACAGCC 57.941 52.381 2.04 0.00 45.07 4.85
617 618 1.886422 TACCCATGTATCCACAGCCA 58.114 50.000 0.00 0.00 38.30 4.75
618 619 0.548031 ACCCATGTATCCACAGCCAG 59.452 55.000 0.00 0.00 38.30 4.85
619 620 0.179009 CCCATGTATCCACAGCCAGG 60.179 60.000 0.00 0.00 38.30 4.45
620 621 0.179009 CCATGTATCCACAGCCAGGG 60.179 60.000 0.00 0.00 38.30 4.45
621 622 0.548031 CATGTATCCACAGCCAGGGT 59.452 55.000 0.00 0.00 38.30 4.34
622 623 0.548031 ATGTATCCACAGCCAGGGTG 59.452 55.000 17.62 17.62 38.30 4.61
632 633 2.912025 CCAGGGTGGTTGGCACAC 60.912 66.667 0.00 0.00 39.29 3.82
660 661 5.482526 GGAGTTATTTACCCAAAACCACCAT 59.517 40.000 0.00 0.00 0.00 3.55
768 769 1.414919 ACTGACTGGTCGTTTTAGCCA 59.585 47.619 0.00 0.00 0.00 4.75
769 770 2.038557 ACTGACTGGTCGTTTTAGCCAT 59.961 45.455 0.00 0.00 0.00 4.40
1209 1222 0.379669 GAATGGAGTGGCATTGCTCG 59.620 55.000 8.82 0.00 32.83 5.03
1372 1386 4.964593 AGTTTTTGCTCCATTCAAATGCT 58.035 34.783 0.00 0.00 33.94 3.79
1595 1609 7.767198 ACAACTAGTGTACAACATTGTTAGTGT 59.233 33.333 1.98 0.00 42.35 3.55
1884 2155 1.373570 GTCAGTGGCTATGCAGTTCC 58.626 55.000 0.00 0.00 0.00 3.62
2757 3380 2.237643 TGAAGCAAGCCAACATAGCAA 58.762 42.857 0.00 0.00 0.00 3.91
2881 3504 7.775093 ACATAGGTTCAACACAGCATTACATAT 59.225 33.333 0.00 0.00 0.00 1.78
2923 3546 3.828875 AGATAAAGTGCTCTAGTGCCC 57.171 47.619 13.91 2.64 0.00 5.36
3034 3657 2.871096 TGTATCTTGCCCTTTTCGGT 57.129 45.000 0.00 0.00 0.00 4.69
3044 3667 3.520317 TGCCCTTTTCGGTCTATTTCCTA 59.480 43.478 0.00 0.00 0.00 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 6.507900 ACGAATCTAGGTGACTATTGACATG 58.492 40.000 0.00 0.00 43.39 3.21
12 13 6.255887 GTCCAAACGAATCTAGGTGACTATTG 59.744 42.308 0.00 0.00 43.39 1.90
123 124 1.134098 CGTACTCCCCATCCTTGCAAT 60.134 52.381 0.00 0.00 0.00 3.56
124 125 0.251916 CGTACTCCCCATCCTTGCAA 59.748 55.000 0.00 0.00 0.00 4.08
125 126 0.907704 ACGTACTCCCCATCCTTGCA 60.908 55.000 0.00 0.00 0.00 4.08
126 127 0.462047 CACGTACTCCCCATCCTTGC 60.462 60.000 0.00 0.00 0.00 4.01
127 128 0.178068 CCACGTACTCCCCATCCTTG 59.822 60.000 0.00 0.00 0.00 3.61
128 129 1.623542 GCCACGTACTCCCCATCCTT 61.624 60.000 0.00 0.00 0.00 3.36
129 130 2.064581 GCCACGTACTCCCCATCCT 61.065 63.158 0.00 0.00 0.00 3.24
130 131 2.504519 GCCACGTACTCCCCATCC 59.495 66.667 0.00 0.00 0.00 3.51
131 132 2.504519 GGCCACGTACTCCCCATC 59.495 66.667 0.00 0.00 0.00 3.51
132 133 3.087906 GGGCCACGTACTCCCCAT 61.088 66.667 4.39 0.00 37.46 4.00
133 134 3.857521 AAGGGCCACGTACTCCCCA 62.858 63.158 6.18 0.00 40.97 4.96
134 135 3.007323 AAGGGCCACGTACTCCCC 61.007 66.667 6.18 9.03 40.97 4.81
135 136 1.259840 TACAAGGGCCACGTACTCCC 61.260 60.000 6.18 10.10 40.36 4.30
136 137 0.828677 ATACAAGGGCCACGTACTCC 59.171 55.000 6.18 0.00 0.00 3.85
137 138 3.319972 TCATATACAAGGGCCACGTACTC 59.680 47.826 6.18 0.00 0.00 2.59
138 139 3.302161 TCATATACAAGGGCCACGTACT 58.698 45.455 6.18 0.00 0.00 2.73
139 140 3.069158 ACTCATATACAAGGGCCACGTAC 59.931 47.826 6.18 0.00 0.00 3.67
140 141 3.302161 ACTCATATACAAGGGCCACGTA 58.698 45.455 6.18 6.94 0.00 3.57
141 142 2.116238 ACTCATATACAAGGGCCACGT 58.884 47.619 6.18 4.43 0.00 4.49
142 143 2.910688 ACTCATATACAAGGGCCACG 57.089 50.000 6.18 0.00 0.00 4.94
143 144 6.947464 ACATATACTCATATACAAGGGCCAC 58.053 40.000 6.18 0.00 0.00 5.01
144 145 6.156256 GGACATATACTCATATACAAGGGCCA 59.844 42.308 6.18 0.00 0.00 5.36
145 146 6.583562 GGACATATACTCATATACAAGGGCC 58.416 44.000 0.00 0.00 0.00 5.80
146 147 6.096423 TCGGACATATACTCATATACAAGGGC 59.904 42.308 0.00 0.00 0.00 5.19
147 148 7.640597 TCGGACATATACTCATATACAAGGG 57.359 40.000 0.00 0.00 0.00 3.95
148 149 8.191446 CCTTCGGACATATACTCATATACAAGG 58.809 40.741 0.00 0.00 0.00 3.61
149 150 8.957466 TCCTTCGGACATATACTCATATACAAG 58.043 37.037 0.00 0.00 0.00 3.16
150 151 8.873186 TCCTTCGGACATATACTCATATACAA 57.127 34.615 0.00 0.00 0.00 2.41
151 152 8.326529 TCTCCTTCGGACATATACTCATATACA 58.673 37.037 0.00 0.00 0.00 2.29
152 153 8.614346 GTCTCCTTCGGACATATACTCATATAC 58.386 40.741 0.00 0.00 34.23 1.47
153 154 7.774157 GGTCTCCTTCGGACATATACTCATATA 59.226 40.741 0.00 0.00 35.61 0.86
154 155 6.603997 GGTCTCCTTCGGACATATACTCATAT 59.396 42.308 0.00 0.00 35.61 1.78
155 156 5.944599 GGTCTCCTTCGGACATATACTCATA 59.055 44.000 0.00 0.00 35.61 2.15
156 157 4.767928 GGTCTCCTTCGGACATATACTCAT 59.232 45.833 0.00 0.00 35.61 2.90
157 158 4.141228 AGGTCTCCTTCGGACATATACTCA 60.141 45.833 0.00 0.00 35.61 3.41
158 159 4.400120 AGGTCTCCTTCGGACATATACTC 58.600 47.826 0.00 0.00 35.61 2.59
159 160 4.400120 GAGGTCTCCTTCGGACATATACT 58.600 47.826 0.00 0.00 31.76 2.12
160 161 3.506844 GGAGGTCTCCTTCGGACATATAC 59.493 52.174 9.64 0.00 46.16 1.47
161 162 3.764218 GGAGGTCTCCTTCGGACATATA 58.236 50.000 9.64 0.00 46.16 0.86
162 163 2.599677 GGAGGTCTCCTTCGGACATAT 58.400 52.381 9.64 0.00 46.16 1.78
163 164 2.068834 GGAGGTCTCCTTCGGACATA 57.931 55.000 9.64 0.00 46.16 2.29
164 165 2.903404 GGAGGTCTCCTTCGGACAT 58.097 57.895 9.64 0.00 46.16 3.06
165 166 4.436368 GGAGGTCTCCTTCGGACA 57.564 61.111 9.64 0.00 46.16 4.02
174 175 5.407407 TCTGAGTTTATGTTGGAGGTCTC 57.593 43.478 0.00 0.00 0.00 3.36
175 176 4.223923 CCTCTGAGTTTATGTTGGAGGTCT 59.776 45.833 3.66 0.00 35.50 3.85
176 177 4.020128 ACCTCTGAGTTTATGTTGGAGGTC 60.020 45.833 3.66 0.00 45.86 3.85
177 178 3.910627 ACCTCTGAGTTTATGTTGGAGGT 59.089 43.478 3.66 0.00 44.65 3.85
178 179 4.020218 TGACCTCTGAGTTTATGTTGGAGG 60.020 45.833 3.66 0.00 42.96 4.30
179 180 5.152623 TGACCTCTGAGTTTATGTTGGAG 57.847 43.478 3.66 0.00 0.00 3.86
180 181 5.762179 ATGACCTCTGAGTTTATGTTGGA 57.238 39.130 3.66 0.00 0.00 3.53
181 182 6.430925 TGAAATGACCTCTGAGTTTATGTTGG 59.569 38.462 3.66 0.00 0.00 3.77
182 183 7.439157 TGAAATGACCTCTGAGTTTATGTTG 57.561 36.000 3.66 0.00 0.00 3.33
183 184 7.721399 AGTTGAAATGACCTCTGAGTTTATGTT 59.279 33.333 3.66 0.00 0.00 2.71
184 185 7.227156 AGTTGAAATGACCTCTGAGTTTATGT 58.773 34.615 3.66 0.00 0.00 2.29
185 186 7.605691 AGAGTTGAAATGACCTCTGAGTTTATG 59.394 37.037 3.66 0.00 0.00 1.90
186 187 7.684529 AGAGTTGAAATGACCTCTGAGTTTAT 58.315 34.615 3.66 0.00 0.00 1.40
187 188 7.067496 AGAGTTGAAATGACCTCTGAGTTTA 57.933 36.000 3.66 0.00 0.00 2.01
188 189 5.934781 AGAGTTGAAATGACCTCTGAGTTT 58.065 37.500 3.66 0.00 0.00 2.66
189 190 5.559148 AGAGTTGAAATGACCTCTGAGTT 57.441 39.130 3.66 0.00 0.00 3.01
190 191 5.186797 CCTAGAGTTGAAATGACCTCTGAGT 59.813 44.000 3.66 0.00 0.00 3.41
191 192 5.420421 TCCTAGAGTTGAAATGACCTCTGAG 59.580 44.000 0.00 0.00 0.00 3.35
192 193 5.333581 TCCTAGAGTTGAAATGACCTCTGA 58.666 41.667 0.00 0.00 0.00 3.27
193 194 5.659463 CTCCTAGAGTTGAAATGACCTCTG 58.341 45.833 0.00 0.00 0.00 3.35
194 195 4.161377 GCTCCTAGAGTTGAAATGACCTCT 59.839 45.833 0.00 0.00 31.39 3.69
195 196 4.081420 TGCTCCTAGAGTTGAAATGACCTC 60.081 45.833 0.00 0.00 31.39 3.85
196 197 3.840666 TGCTCCTAGAGTTGAAATGACCT 59.159 43.478 0.00 0.00 31.39 3.85
197 198 4.207891 TGCTCCTAGAGTTGAAATGACC 57.792 45.455 0.00 0.00 31.39 4.02
198 199 6.404074 CCAAATGCTCCTAGAGTTGAAATGAC 60.404 42.308 0.00 0.00 31.39 3.06
199 200 5.649395 CCAAATGCTCCTAGAGTTGAAATGA 59.351 40.000 0.00 0.00 31.39 2.57
200 201 5.649395 TCCAAATGCTCCTAGAGTTGAAATG 59.351 40.000 0.00 0.00 31.39 2.32
201 202 5.819991 TCCAAATGCTCCTAGAGTTGAAAT 58.180 37.500 0.00 0.00 31.39 2.17
202 203 5.241403 TCCAAATGCTCCTAGAGTTGAAA 57.759 39.130 0.00 0.00 31.39 2.69
203 204 4.908601 TCCAAATGCTCCTAGAGTTGAA 57.091 40.909 0.00 0.00 31.39 2.69
204 205 4.908601 TTCCAAATGCTCCTAGAGTTGA 57.091 40.909 0.00 0.00 31.39 3.18
205 206 5.435291 AGATTCCAAATGCTCCTAGAGTTG 58.565 41.667 0.00 0.00 31.39 3.16
206 207 5.397334 GGAGATTCCAAATGCTCCTAGAGTT 60.397 44.000 0.00 0.00 42.81 3.01
207 208 4.102367 GGAGATTCCAAATGCTCCTAGAGT 59.898 45.833 0.00 0.00 42.81 3.24
208 209 4.102210 TGGAGATTCCAAATGCTCCTAGAG 59.898 45.833 0.00 0.00 45.00 2.43
209 210 4.040047 TGGAGATTCCAAATGCTCCTAGA 58.960 43.478 0.00 0.00 45.00 2.43
210 211 4.428294 TGGAGATTCCAAATGCTCCTAG 57.572 45.455 0.00 0.00 45.00 3.02
222 223 4.160439 GGGGAACTTGAAAATGGAGATTCC 59.840 45.833 0.00 0.00 36.96 3.01
223 224 4.772100 TGGGGAACTTGAAAATGGAGATTC 59.228 41.667 0.00 0.00 0.00 2.52
224 225 4.750941 TGGGGAACTTGAAAATGGAGATT 58.249 39.130 0.00 0.00 0.00 2.40
225 226 4.402616 TGGGGAACTTGAAAATGGAGAT 57.597 40.909 0.00 0.00 0.00 2.75
226 227 3.893753 TGGGGAACTTGAAAATGGAGA 57.106 42.857 0.00 0.00 0.00 3.71
227 228 4.824289 CATTGGGGAACTTGAAAATGGAG 58.176 43.478 0.00 0.00 0.00 3.86
228 229 3.007831 GCATTGGGGAACTTGAAAATGGA 59.992 43.478 0.00 0.00 0.00 3.41
229 230 3.008266 AGCATTGGGGAACTTGAAAATGG 59.992 43.478 0.00 0.00 0.00 3.16
230 231 4.276058 AGCATTGGGGAACTTGAAAATG 57.724 40.909 0.00 0.00 0.00 2.32
231 232 5.306678 TGTTAGCATTGGGGAACTTGAAAAT 59.693 36.000 0.00 0.00 0.00 1.82
232 233 4.651503 TGTTAGCATTGGGGAACTTGAAAA 59.348 37.500 0.00 0.00 0.00 2.29
233 234 4.038642 GTGTTAGCATTGGGGAACTTGAAA 59.961 41.667 0.00 0.00 0.00 2.69
234 235 3.572255 GTGTTAGCATTGGGGAACTTGAA 59.428 43.478 0.00 0.00 0.00 2.69
235 236 3.153919 GTGTTAGCATTGGGGAACTTGA 58.846 45.455 0.00 0.00 0.00 3.02
236 237 3.157087 AGTGTTAGCATTGGGGAACTTG 58.843 45.455 0.00 0.00 0.00 3.16
237 238 3.181434 TGAGTGTTAGCATTGGGGAACTT 60.181 43.478 0.00 0.00 0.00 2.66
238 239 2.375174 TGAGTGTTAGCATTGGGGAACT 59.625 45.455 0.00 0.00 0.00 3.01
239 240 2.488153 GTGAGTGTTAGCATTGGGGAAC 59.512 50.000 0.00 0.00 0.00 3.62
240 241 2.554344 GGTGAGTGTTAGCATTGGGGAA 60.554 50.000 0.00 0.00 0.00 3.97
241 242 1.004277 GGTGAGTGTTAGCATTGGGGA 59.996 52.381 0.00 0.00 0.00 4.81
242 243 1.271871 TGGTGAGTGTTAGCATTGGGG 60.272 52.381 0.00 0.00 0.00 4.96
243 244 2.198827 TGGTGAGTGTTAGCATTGGG 57.801 50.000 0.00 0.00 0.00 4.12
244 245 3.084039 ACATGGTGAGTGTTAGCATTGG 58.916 45.455 0.00 0.00 34.32 3.16
245 246 4.456911 AGAACATGGTGAGTGTTAGCATTG 59.543 41.667 0.00 0.00 39.72 2.82
246 247 4.456911 CAGAACATGGTGAGTGTTAGCATT 59.543 41.667 0.00 0.00 39.72 3.56
247 248 4.005650 CAGAACATGGTGAGTGTTAGCAT 58.994 43.478 0.00 0.00 39.72 3.79
248 249 3.402110 CAGAACATGGTGAGTGTTAGCA 58.598 45.455 0.00 0.00 39.72 3.49
249 250 2.160417 GCAGAACATGGTGAGTGTTAGC 59.840 50.000 0.00 0.00 39.72 3.09
250 251 3.402110 TGCAGAACATGGTGAGTGTTAG 58.598 45.455 0.00 0.00 39.72 2.34
251 252 3.402110 CTGCAGAACATGGTGAGTGTTA 58.598 45.455 8.42 0.00 39.72 2.41
252 253 2.224606 CTGCAGAACATGGTGAGTGTT 58.775 47.619 8.42 0.00 42.13 3.32
253 254 1.544093 CCTGCAGAACATGGTGAGTGT 60.544 52.381 17.39 0.00 0.00 3.55
254 255 1.162698 CCTGCAGAACATGGTGAGTG 58.837 55.000 17.39 0.00 0.00 3.51
255 256 0.037303 CCCTGCAGAACATGGTGAGT 59.963 55.000 17.39 0.00 29.86 3.41
256 257 0.325933 TCCCTGCAGAACATGGTGAG 59.674 55.000 17.39 0.00 35.65 3.51
257 258 0.325933 CTCCCTGCAGAACATGGTGA 59.674 55.000 17.39 0.00 35.65 4.02
258 259 0.325933 TCTCCCTGCAGAACATGGTG 59.674 55.000 17.39 8.44 35.65 4.17
259 260 0.617413 CTCTCCCTGCAGAACATGGT 59.383 55.000 17.39 0.00 35.65 3.55
260 261 0.907486 TCTCTCCCTGCAGAACATGG 59.093 55.000 17.39 7.53 35.48 3.66
261 262 2.169978 TGATCTCTCCCTGCAGAACATG 59.830 50.000 17.39 2.39 0.00 3.21
262 263 2.170187 GTGATCTCTCCCTGCAGAACAT 59.830 50.000 17.39 0.00 0.00 2.71
263 264 1.552337 GTGATCTCTCCCTGCAGAACA 59.448 52.381 17.39 0.00 0.00 3.18
264 265 1.552337 TGTGATCTCTCCCTGCAGAAC 59.448 52.381 17.39 0.00 0.00 3.01
265 266 1.942776 TGTGATCTCTCCCTGCAGAA 58.057 50.000 17.39 1.42 0.00 3.02
266 267 1.942776 TTGTGATCTCTCCCTGCAGA 58.057 50.000 17.39 0.00 0.00 4.26
267 268 2.169978 TCATTGTGATCTCTCCCTGCAG 59.830 50.000 6.78 6.78 0.00 4.41
268 269 2.190538 TCATTGTGATCTCTCCCTGCA 58.809 47.619 0.00 0.00 0.00 4.41
269 270 2.996249 TCATTGTGATCTCTCCCTGC 57.004 50.000 0.00 0.00 0.00 4.85
270 271 3.390311 TCCATCATTGTGATCTCTCCCTG 59.610 47.826 0.00 0.00 34.28 4.45
271 272 3.662078 TCCATCATTGTGATCTCTCCCT 58.338 45.455 0.00 0.00 34.28 4.20
272 273 4.202440 ACATCCATCATTGTGATCTCTCCC 60.202 45.833 0.00 0.00 34.28 4.30
273 274 4.970711 ACATCCATCATTGTGATCTCTCC 58.029 43.478 0.00 0.00 34.28 3.71
274 275 6.939132 AAACATCCATCATTGTGATCTCTC 57.061 37.500 0.00 0.00 34.28 3.20
275 276 7.284034 GGTTAAACATCCATCATTGTGATCTCT 59.716 37.037 0.00 0.00 34.28 3.10
276 277 7.284034 AGGTTAAACATCCATCATTGTGATCTC 59.716 37.037 0.00 0.00 34.28 2.75
277 278 7.067859 CAGGTTAAACATCCATCATTGTGATCT 59.932 37.037 0.00 0.00 34.28 2.75
278 279 7.198390 CAGGTTAAACATCCATCATTGTGATC 58.802 38.462 0.00 0.00 34.28 2.92
279 280 6.097270 CCAGGTTAAACATCCATCATTGTGAT 59.903 38.462 0.00 0.00 37.65 3.06
280 281 5.418524 CCAGGTTAAACATCCATCATTGTGA 59.581 40.000 0.00 0.00 0.00 3.58
281 282 5.418524 TCCAGGTTAAACATCCATCATTGTG 59.581 40.000 0.00 0.00 0.00 3.33
282 283 5.579047 TCCAGGTTAAACATCCATCATTGT 58.421 37.500 0.00 0.00 0.00 2.71
283 284 5.887598 TCTCCAGGTTAAACATCCATCATTG 59.112 40.000 0.00 0.00 0.00 2.82
284 285 5.888161 GTCTCCAGGTTAAACATCCATCATT 59.112 40.000 0.00 0.00 0.00 2.57
285 286 5.044919 TGTCTCCAGGTTAAACATCCATCAT 60.045 40.000 0.00 0.00 0.00 2.45
286 287 4.288366 TGTCTCCAGGTTAAACATCCATCA 59.712 41.667 0.00 0.00 0.00 3.07
287 288 4.843728 TGTCTCCAGGTTAAACATCCATC 58.156 43.478 0.00 0.00 0.00 3.51
288 289 4.536090 TCTGTCTCCAGGTTAAACATCCAT 59.464 41.667 0.00 0.00 39.31 3.41
289 290 3.907474 TCTGTCTCCAGGTTAAACATCCA 59.093 43.478 0.00 0.00 39.31 3.41
290 291 4.223032 TCTCTGTCTCCAGGTTAAACATCC 59.777 45.833 0.00 0.00 39.31 3.51
291 292 5.046950 AGTCTCTGTCTCCAGGTTAAACATC 60.047 44.000 0.00 0.00 39.31 3.06
292 293 4.841246 AGTCTCTGTCTCCAGGTTAAACAT 59.159 41.667 0.00 0.00 39.31 2.71
293 294 4.223953 AGTCTCTGTCTCCAGGTTAAACA 58.776 43.478 0.00 0.00 39.31 2.83
294 295 4.811908 GAGTCTCTGTCTCCAGGTTAAAC 58.188 47.826 0.00 0.00 39.31 2.01
304 305 6.238897 CCAGTACAATATGGAGTCTCTGTCTC 60.239 46.154 0.00 0.00 39.02 3.36
305 306 5.596361 CCAGTACAATATGGAGTCTCTGTCT 59.404 44.000 0.00 0.00 39.02 3.41
306 307 5.594725 TCCAGTACAATATGGAGTCTCTGTC 59.405 44.000 0.00 0.00 40.70 3.51
307 308 5.519808 TCCAGTACAATATGGAGTCTCTGT 58.480 41.667 0.00 0.00 40.70 3.41
315 316 3.068165 CGCAGACTCCAGTACAATATGGA 59.932 47.826 0.00 0.00 43.34 3.41
316 317 3.384668 CGCAGACTCCAGTACAATATGG 58.615 50.000 0.00 0.00 37.97 2.74
317 318 2.797156 GCGCAGACTCCAGTACAATATG 59.203 50.000 0.30 0.00 0.00 1.78
318 319 2.430694 TGCGCAGACTCCAGTACAATAT 59.569 45.455 5.66 0.00 0.00 1.28
319 320 1.822371 TGCGCAGACTCCAGTACAATA 59.178 47.619 5.66 0.00 0.00 1.90
320 321 0.608130 TGCGCAGACTCCAGTACAAT 59.392 50.000 5.66 0.00 0.00 2.71
321 322 0.391228 TTGCGCAGACTCCAGTACAA 59.609 50.000 11.31 0.00 0.00 2.41
322 323 0.038251 CTTGCGCAGACTCCAGTACA 60.038 55.000 11.31 0.00 0.00 2.90
323 324 0.737715 CCTTGCGCAGACTCCAGTAC 60.738 60.000 11.31 0.00 0.00 2.73
324 325 1.185618 ACCTTGCGCAGACTCCAGTA 61.186 55.000 11.31 0.00 0.00 2.74
325 326 1.185618 TACCTTGCGCAGACTCCAGT 61.186 55.000 11.31 4.30 0.00 4.00
326 327 0.176680 ATACCTTGCGCAGACTCCAG 59.823 55.000 11.31 3.46 0.00 3.86
327 328 1.136305 GTATACCTTGCGCAGACTCCA 59.864 52.381 11.31 0.00 0.00 3.86
328 329 1.136305 TGTATACCTTGCGCAGACTCC 59.864 52.381 11.31 0.00 0.00 3.85
329 330 2.159226 AGTGTATACCTTGCGCAGACTC 60.159 50.000 11.31 4.63 0.00 3.36
330 331 1.825474 AGTGTATACCTTGCGCAGACT 59.175 47.619 11.31 0.00 0.00 3.24
331 332 2.159226 AGAGTGTATACCTTGCGCAGAC 60.159 50.000 11.31 4.03 0.00 3.51
332 333 2.100197 AGAGTGTATACCTTGCGCAGA 58.900 47.619 11.31 0.62 0.00 4.26
333 334 2.586258 AGAGTGTATACCTTGCGCAG 57.414 50.000 11.31 1.78 0.00 5.18
334 335 2.496070 AGAAGAGTGTATACCTTGCGCA 59.504 45.455 5.66 5.66 0.00 6.09
335 336 2.860735 CAGAAGAGTGTATACCTTGCGC 59.139 50.000 0.00 0.00 0.00 6.09
336 337 3.119101 ACCAGAAGAGTGTATACCTTGCG 60.119 47.826 0.00 0.00 0.00 4.85
337 338 4.473477 ACCAGAAGAGTGTATACCTTGC 57.527 45.455 0.00 0.00 0.00 4.01
338 339 5.643777 CCAAACCAGAAGAGTGTATACCTTG 59.356 44.000 0.00 0.00 0.00 3.61
339 340 5.546499 TCCAAACCAGAAGAGTGTATACCTT 59.454 40.000 0.00 0.00 0.00 3.50
340 341 5.091552 TCCAAACCAGAAGAGTGTATACCT 58.908 41.667 0.00 0.00 0.00 3.08
341 342 5.416271 TCCAAACCAGAAGAGTGTATACC 57.584 43.478 0.00 0.00 0.00 2.73
342 343 9.046296 CATAATCCAAACCAGAAGAGTGTATAC 57.954 37.037 0.00 0.00 0.00 1.47
343 344 8.768397 ACATAATCCAAACCAGAAGAGTGTATA 58.232 33.333 0.00 0.00 0.00 1.47
344 345 7.633789 ACATAATCCAAACCAGAAGAGTGTAT 58.366 34.615 0.00 0.00 0.00 2.29
345 346 7.016153 ACATAATCCAAACCAGAAGAGTGTA 57.984 36.000 0.00 0.00 0.00 2.90
346 347 5.880901 ACATAATCCAAACCAGAAGAGTGT 58.119 37.500 0.00 0.00 0.00 3.55
347 348 6.824305 AACATAATCCAAACCAGAAGAGTG 57.176 37.500 0.00 0.00 0.00 3.51
348 349 7.775561 GGATAACATAATCCAAACCAGAAGAGT 59.224 37.037 0.00 0.00 44.26 3.24
349 350 7.229506 GGGATAACATAATCCAAACCAGAAGAG 59.770 40.741 5.32 0.00 46.29 2.85
350 351 7.060421 GGGATAACATAATCCAAACCAGAAGA 58.940 38.462 5.32 0.00 46.29 2.87
351 352 6.833416 TGGGATAACATAATCCAAACCAGAAG 59.167 38.462 5.32 0.00 46.29 2.85
352 353 6.736581 TGGGATAACATAATCCAAACCAGAA 58.263 36.000 5.32 0.00 46.29 3.02
353 354 6.334378 TGGGATAACATAATCCAAACCAGA 57.666 37.500 5.32 0.00 46.29 3.86
354 355 6.777091 TGATGGGATAACATAATCCAAACCAG 59.223 38.462 5.32 0.00 46.29 4.00
355 356 6.677552 TGATGGGATAACATAATCCAAACCA 58.322 36.000 5.32 0.00 46.29 3.67
356 357 7.781324 ATGATGGGATAACATAATCCAAACC 57.219 36.000 5.32 0.00 46.29 3.27
357 358 9.480053 CAAATGATGGGATAACATAATCCAAAC 57.520 33.333 5.32 0.00 46.29 2.93
358 359 9.211410 ACAAATGATGGGATAACATAATCCAAA 57.789 29.630 5.32 0.00 46.29 3.28
359 360 8.780616 ACAAATGATGGGATAACATAATCCAA 57.219 30.769 5.32 0.00 46.29 3.53
360 361 8.640651 CAACAAATGATGGGATAACATAATCCA 58.359 33.333 5.32 0.00 46.29 3.41
361 362 7.599998 GCAACAAATGATGGGATAACATAATCC 59.400 37.037 0.00 0.00 44.14 3.01
362 363 8.362639 AGCAACAAATGATGGGATAACATAATC 58.637 33.333 0.00 0.00 0.00 1.75
363 364 8.253867 AGCAACAAATGATGGGATAACATAAT 57.746 30.769 0.00 0.00 0.00 1.28
364 365 7.658525 AGCAACAAATGATGGGATAACATAA 57.341 32.000 0.00 0.00 0.00 1.90
365 366 7.658525 AAGCAACAAATGATGGGATAACATA 57.341 32.000 0.00 0.00 0.00 2.29
366 367 6.549433 AAGCAACAAATGATGGGATAACAT 57.451 33.333 0.00 0.00 0.00 2.71
367 368 5.999205 AAGCAACAAATGATGGGATAACA 57.001 34.783 0.00 0.00 0.00 2.41
368 369 6.092533 CCAAAAGCAACAAATGATGGGATAAC 59.907 38.462 0.00 0.00 0.00 1.89
369 370 6.171921 CCAAAAGCAACAAATGATGGGATAA 58.828 36.000 0.00 0.00 0.00 1.75
370 371 5.248020 ACCAAAAGCAACAAATGATGGGATA 59.752 36.000 0.00 0.00 0.00 2.59
371 372 4.041938 ACCAAAAGCAACAAATGATGGGAT 59.958 37.500 0.00 0.00 0.00 3.85
372 373 3.390639 ACCAAAAGCAACAAATGATGGGA 59.609 39.130 0.00 0.00 0.00 4.37
373 374 3.742385 ACCAAAAGCAACAAATGATGGG 58.258 40.909 0.00 0.00 0.00 4.00
374 375 4.634199 AGACCAAAAGCAACAAATGATGG 58.366 39.130 0.00 0.00 0.00 3.51
375 376 5.535333 AGAGACCAAAAGCAACAAATGATG 58.465 37.500 0.00 0.00 0.00 3.07
376 377 5.796424 AGAGACCAAAAGCAACAAATGAT 57.204 34.783 0.00 0.00 0.00 2.45
377 378 5.241506 CCTAGAGACCAAAAGCAACAAATGA 59.758 40.000 0.00 0.00 0.00 2.57
378 379 5.241506 TCCTAGAGACCAAAAGCAACAAATG 59.758 40.000 0.00 0.00 0.00 2.32
379 380 5.385198 TCCTAGAGACCAAAAGCAACAAAT 58.615 37.500 0.00 0.00 0.00 2.32
380 381 4.787551 TCCTAGAGACCAAAAGCAACAAA 58.212 39.130 0.00 0.00 0.00 2.83
381 382 4.431416 TCCTAGAGACCAAAAGCAACAA 57.569 40.909 0.00 0.00 0.00 2.83
382 383 4.431416 TTCCTAGAGACCAAAAGCAACA 57.569 40.909 0.00 0.00 0.00 3.33
383 384 5.966742 AATTCCTAGAGACCAAAAGCAAC 57.033 39.130 0.00 0.00 0.00 4.17
384 385 5.278957 GCAAATTCCTAGAGACCAAAAGCAA 60.279 40.000 0.00 0.00 0.00 3.91
385 386 4.218417 GCAAATTCCTAGAGACCAAAAGCA 59.782 41.667 0.00 0.00 0.00 3.91
386 387 4.218417 TGCAAATTCCTAGAGACCAAAAGC 59.782 41.667 0.00 0.00 0.00 3.51
387 388 5.964958 TGCAAATTCCTAGAGACCAAAAG 57.035 39.130 0.00 0.00 0.00 2.27
388 389 5.336690 GCATGCAAATTCCTAGAGACCAAAA 60.337 40.000 14.21 0.00 0.00 2.44
389 390 4.158394 GCATGCAAATTCCTAGAGACCAAA 59.842 41.667 14.21 0.00 0.00 3.28
390 391 3.696051 GCATGCAAATTCCTAGAGACCAA 59.304 43.478 14.21 0.00 0.00 3.67
391 392 3.054139 AGCATGCAAATTCCTAGAGACCA 60.054 43.478 21.98 0.00 0.00 4.02
392 393 3.549794 AGCATGCAAATTCCTAGAGACC 58.450 45.455 21.98 0.00 0.00 3.85
393 394 4.213059 GCTAGCATGCAAATTCCTAGAGAC 59.787 45.833 21.98 0.00 0.00 3.36
394 395 4.141642 TGCTAGCATGCAAATTCCTAGAGA 60.142 41.667 21.98 0.00 40.29 3.10
395 396 4.024218 GTGCTAGCATGCAAATTCCTAGAG 60.024 45.833 22.51 2.15 45.12 2.43
396 397 3.879295 GTGCTAGCATGCAAATTCCTAGA 59.121 43.478 22.51 0.00 45.12 2.43
397 398 3.628942 TGTGCTAGCATGCAAATTCCTAG 59.371 43.478 22.51 11.70 45.12 3.02
398 399 3.619419 TGTGCTAGCATGCAAATTCCTA 58.381 40.909 22.51 0.00 45.12 2.94
399 400 2.449464 TGTGCTAGCATGCAAATTCCT 58.551 42.857 22.51 0.00 45.12 3.36
400 401 2.945447 TGTGCTAGCATGCAAATTCC 57.055 45.000 22.51 4.90 45.12 3.01
409 410 2.484417 GCTACTCCACATGTGCTAGCAT 60.484 50.000 27.19 2.08 31.98 3.79
410 411 1.134699 GCTACTCCACATGTGCTAGCA 60.135 52.381 27.19 14.93 31.98 3.49
411 412 1.576356 GCTACTCCACATGTGCTAGC 58.424 55.000 20.81 21.79 0.00 3.42
412 413 1.482182 TGGCTACTCCACATGTGCTAG 59.518 52.381 20.81 19.96 40.72 3.42
413 414 1.567357 TGGCTACTCCACATGTGCTA 58.433 50.000 20.81 9.46 40.72 3.49
414 415 0.692476 TTGGCTACTCCACATGTGCT 59.308 50.000 20.81 7.19 46.55 4.40
415 416 1.402968 CATTGGCTACTCCACATGTGC 59.597 52.381 20.81 7.70 46.55 4.57
416 417 2.679837 GACATTGGCTACTCCACATGTG 59.320 50.000 19.31 19.31 46.55 3.21
417 418 2.305635 TGACATTGGCTACTCCACATGT 59.694 45.455 0.00 0.00 46.55 3.21
418 419 2.989909 TGACATTGGCTACTCCACATG 58.010 47.619 0.00 0.00 46.55 3.21
419 420 3.719268 TTGACATTGGCTACTCCACAT 57.281 42.857 0.00 0.00 46.55 3.21
420 421 3.346315 CATTGACATTGGCTACTCCACA 58.654 45.455 0.00 0.00 46.55 4.17
421 422 2.684881 CCATTGACATTGGCTACTCCAC 59.315 50.000 3.51 0.00 46.55 4.02
422 423 2.308570 ACCATTGACATTGGCTACTCCA 59.691 45.455 14.89 0.00 44.85 3.86
423 424 3.004752 ACCATTGACATTGGCTACTCC 57.995 47.619 14.89 0.00 37.81 3.85
424 425 5.368145 TCATACCATTGACATTGGCTACTC 58.632 41.667 14.89 0.00 37.81 2.59
425 426 5.372343 TCATACCATTGACATTGGCTACT 57.628 39.130 14.89 0.41 37.81 2.57
426 427 5.532406 ACATCATACCATTGACATTGGCTAC 59.468 40.000 14.89 0.00 37.81 3.58
427 428 5.532032 CACATCATACCATTGACATTGGCTA 59.468 40.000 14.89 8.17 37.81 3.93
428 429 4.340097 CACATCATACCATTGACATTGGCT 59.660 41.667 14.89 6.52 37.81 4.75
429 430 4.613944 CACATCATACCATTGACATTGGC 58.386 43.478 14.89 0.00 37.81 4.52
430 431 4.098196 TGCACATCATACCATTGACATTGG 59.902 41.667 13.65 13.65 40.26 3.16
431 432 5.251601 TGCACATCATACCATTGACATTG 57.748 39.130 0.00 0.00 0.00 2.82
432 433 5.737922 GCATGCACATCATACCATTGACATT 60.738 40.000 14.21 0.00 33.19 2.71
433 434 4.261867 GCATGCACATCATACCATTGACAT 60.262 41.667 14.21 0.00 33.19 3.06
434 435 3.067040 GCATGCACATCATACCATTGACA 59.933 43.478 14.21 0.00 33.19 3.58
435 436 3.067040 TGCATGCACATCATACCATTGAC 59.933 43.478 18.46 0.00 33.19 3.18
436 437 3.288964 TGCATGCACATCATACCATTGA 58.711 40.909 18.46 0.00 33.19 2.57
437 438 3.552068 CCTGCATGCACATCATACCATTG 60.552 47.826 18.46 1.70 33.19 2.82
438 439 2.626266 CCTGCATGCACATCATACCATT 59.374 45.455 18.46 0.00 33.19 3.16
439 440 2.235891 CCTGCATGCACATCATACCAT 58.764 47.619 18.46 0.00 33.19 3.55
440 441 1.682740 CCTGCATGCACATCATACCA 58.317 50.000 18.46 0.00 33.19 3.25
441 442 0.956633 CCCTGCATGCACATCATACC 59.043 55.000 18.46 0.00 33.19 2.73
442 443 0.313043 GCCCTGCATGCACATCATAC 59.687 55.000 18.46 0.00 33.19 2.39
443 444 0.184211 AGCCCTGCATGCACATCATA 59.816 50.000 18.46 0.00 33.19 2.15
444 445 1.076265 AGCCCTGCATGCACATCAT 60.076 52.632 18.46 0.00 35.31 2.45
445 446 1.751544 GAGCCCTGCATGCACATCA 60.752 57.895 18.46 0.00 0.00 3.07
446 447 2.831366 CGAGCCCTGCATGCACATC 61.831 63.158 18.46 11.05 0.00 3.06
447 448 2.827190 CGAGCCCTGCATGCACAT 60.827 61.111 18.46 2.25 0.00 3.21
448 449 3.963687 CTCGAGCCCTGCATGCACA 62.964 63.158 18.46 0.00 0.00 4.57
449 450 2.578163 TACTCGAGCCCTGCATGCAC 62.578 60.000 18.46 7.57 0.00 4.57
450 451 1.689243 ATACTCGAGCCCTGCATGCA 61.689 55.000 21.29 21.29 0.00 3.96
451 452 0.948141 GATACTCGAGCCCTGCATGC 60.948 60.000 13.61 11.82 0.00 4.06
452 453 0.678395 AGATACTCGAGCCCTGCATG 59.322 55.000 13.61 0.00 0.00 4.06
453 454 0.678395 CAGATACTCGAGCCCTGCAT 59.322 55.000 13.61 0.00 0.00 3.96
454 455 2.021068 GCAGATACTCGAGCCCTGCA 62.021 60.000 31.69 8.90 46.68 4.41
455 456 1.300542 GCAGATACTCGAGCCCTGC 60.301 63.158 26.99 26.99 42.52 4.85
456 457 0.249238 GTGCAGATACTCGAGCCCTG 60.249 60.000 13.61 17.11 0.00 4.45
457 458 0.684479 TGTGCAGATACTCGAGCCCT 60.684 55.000 13.61 4.06 0.00 5.19
458 459 0.175760 TTGTGCAGATACTCGAGCCC 59.824 55.000 13.61 1.45 0.00 5.19
459 460 1.565305 CTTGTGCAGATACTCGAGCC 58.435 55.000 13.61 1.85 0.00 4.70
460 461 1.565305 CCTTGTGCAGATACTCGAGC 58.435 55.000 13.61 0.00 0.00 5.03
461 462 1.565305 GCCTTGTGCAGATACTCGAG 58.435 55.000 11.84 11.84 40.77 4.04
462 463 3.741029 GCCTTGTGCAGATACTCGA 57.259 52.632 0.00 0.00 40.77 4.04
479 480 1.103398 ATGAAAGGCGGGCTACATGC 61.103 55.000 18.08 0.00 41.94 4.06
480 481 1.873591 GTATGAAAGGCGGGCTACATG 59.126 52.381 23.67 0.00 0.00 3.21
481 482 1.488812 TGTATGAAAGGCGGGCTACAT 59.511 47.619 20.86 20.86 0.00 2.29
482 483 0.906066 TGTATGAAAGGCGGGCTACA 59.094 50.000 3.84 9.07 0.00 2.74
483 484 1.296727 GTGTATGAAAGGCGGGCTAC 58.703 55.000 3.84 3.10 0.00 3.58
484 485 0.179468 GGTGTATGAAAGGCGGGCTA 59.821 55.000 3.84 0.00 0.00 3.93
485 486 1.077716 GGTGTATGAAAGGCGGGCT 60.078 57.895 0.00 0.00 0.00 5.19
486 487 2.469516 CGGTGTATGAAAGGCGGGC 61.470 63.158 0.00 0.00 0.00 6.13
487 488 1.817941 CCGGTGTATGAAAGGCGGG 60.818 63.158 0.00 0.00 0.00 6.13
488 489 1.817941 CCCGGTGTATGAAAGGCGG 60.818 63.158 0.00 0.00 0.00 6.13
489 490 0.179056 ATCCCGGTGTATGAAAGGCG 60.179 55.000 0.00 0.00 0.00 5.52
490 491 1.308998 CATCCCGGTGTATGAAAGGC 58.691 55.000 0.00 0.00 0.00 4.35
491 492 2.093181 TCACATCCCGGTGTATGAAAGG 60.093 50.000 13.79 3.29 39.76 3.11
492 493 3.260475 TCACATCCCGGTGTATGAAAG 57.740 47.619 13.79 5.44 39.76 2.62
493 494 3.262151 TCTTCACATCCCGGTGTATGAAA 59.738 43.478 13.79 7.81 39.76 2.69
494 495 2.835156 TCTTCACATCCCGGTGTATGAA 59.165 45.455 13.79 10.73 39.76 2.57
495 496 2.167693 GTCTTCACATCCCGGTGTATGA 59.832 50.000 13.79 4.04 39.76 2.15
496 497 2.550978 GTCTTCACATCCCGGTGTATG 58.449 52.381 0.00 3.80 39.76 2.39
497 498 1.136305 CGTCTTCACATCCCGGTGTAT 59.864 52.381 0.00 0.00 39.76 2.29
498 499 0.528924 CGTCTTCACATCCCGGTGTA 59.471 55.000 0.00 0.00 39.76 2.90
499 500 1.292223 CGTCTTCACATCCCGGTGT 59.708 57.895 0.00 0.00 39.76 4.16
500 501 0.736325 GACGTCTTCACATCCCGGTG 60.736 60.000 8.70 0.00 40.16 4.94
501 502 1.183030 TGACGTCTTCACATCCCGGT 61.183 55.000 17.92 0.00 0.00 5.28
502 503 0.037697 TTGACGTCTTCACATCCCGG 60.038 55.000 17.92 0.00 32.26 5.73
503 504 1.459592 GTTTGACGTCTTCACATCCCG 59.540 52.381 17.92 0.00 32.26 5.14
504 505 2.489971 TGTTTGACGTCTTCACATCCC 58.510 47.619 17.92 0.00 32.26 3.85
505 506 3.125316 GGATGTTTGACGTCTTCACATCC 59.875 47.826 33.96 33.96 44.55 3.51
506 507 3.997021 AGGATGTTTGACGTCTTCACATC 59.003 43.478 28.69 28.69 37.15 3.06
507 508 4.008074 AGGATGTTTGACGTCTTCACAT 57.992 40.909 20.67 20.67 34.62 3.21
508 509 3.469008 AGGATGTTTGACGTCTTCACA 57.531 42.857 17.92 15.95 34.62 3.58
509 510 4.386049 CAGTAGGATGTTTGACGTCTTCAC 59.614 45.833 17.92 10.83 34.62 3.18
510 511 4.556233 CAGTAGGATGTTTGACGTCTTCA 58.444 43.478 17.92 12.91 34.62 3.02
511 512 3.927142 CCAGTAGGATGTTTGACGTCTTC 59.073 47.826 17.92 7.60 34.62 2.87
512 513 3.576982 TCCAGTAGGATGTTTGACGTCTT 59.423 43.478 17.92 0.00 39.61 3.01
513 514 3.162666 TCCAGTAGGATGTTTGACGTCT 58.837 45.455 17.92 0.00 39.61 4.18
514 515 3.587797 TCCAGTAGGATGTTTGACGTC 57.412 47.619 9.11 9.11 39.61 4.34
526 527 5.591877 AGCTTTTAGATTTGCATCCAGTAGG 59.408 40.000 0.00 0.00 0.00 3.18
527 528 6.690194 AGCTTTTAGATTTGCATCCAGTAG 57.310 37.500 0.00 0.00 0.00 2.57
528 529 7.283127 CCTTAGCTTTTAGATTTGCATCCAGTA 59.717 37.037 0.00 0.00 0.00 2.74
529 530 6.096001 CCTTAGCTTTTAGATTTGCATCCAGT 59.904 38.462 0.00 0.00 0.00 4.00
530 531 6.096001 ACCTTAGCTTTTAGATTTGCATCCAG 59.904 38.462 0.00 0.00 0.00 3.86
531 532 5.951747 ACCTTAGCTTTTAGATTTGCATCCA 59.048 36.000 0.00 0.00 0.00 3.41
532 533 6.456795 ACCTTAGCTTTTAGATTTGCATCC 57.543 37.500 0.00 0.00 0.00 3.51
533 534 6.254373 GCAACCTTAGCTTTTAGATTTGCATC 59.746 38.462 16.09 0.00 37.39 3.91
534 535 6.071165 AGCAACCTTAGCTTTTAGATTTGCAT 60.071 34.615 19.54 10.30 39.87 3.96
535 536 5.243730 AGCAACCTTAGCTTTTAGATTTGCA 59.756 36.000 19.54 0.00 39.87 4.08
536 537 5.574443 CAGCAACCTTAGCTTTTAGATTTGC 59.426 40.000 0.00 6.48 41.14 3.68
537 538 6.913170 TCAGCAACCTTAGCTTTTAGATTTG 58.087 36.000 0.00 0.00 41.14 2.32
538 539 7.709149 ATCAGCAACCTTAGCTTTTAGATTT 57.291 32.000 0.00 0.00 41.14 2.17
539 540 7.709149 AATCAGCAACCTTAGCTTTTAGATT 57.291 32.000 0.00 0.00 41.14 2.40
540 541 7.709149 AAATCAGCAACCTTAGCTTTTAGAT 57.291 32.000 0.00 0.00 41.14 1.98
541 542 7.370383 CAAAATCAGCAACCTTAGCTTTTAGA 58.630 34.615 0.00 0.00 41.14 2.10
542 543 6.587608 CCAAAATCAGCAACCTTAGCTTTTAG 59.412 38.462 0.00 0.00 41.14 1.85
543 544 6.454795 CCAAAATCAGCAACCTTAGCTTTTA 58.545 36.000 0.00 0.00 41.14 1.52
544 545 5.299949 CCAAAATCAGCAACCTTAGCTTTT 58.700 37.500 0.00 0.00 41.14 2.27
545 546 4.800582 GCCAAAATCAGCAACCTTAGCTTT 60.801 41.667 0.00 0.00 41.14 3.51
546 547 3.306294 GCCAAAATCAGCAACCTTAGCTT 60.306 43.478 0.00 0.00 41.14 3.74
547 548 2.232208 GCCAAAATCAGCAACCTTAGCT 59.768 45.455 0.00 0.00 44.62 3.32
548 549 2.232208 AGCCAAAATCAGCAACCTTAGC 59.768 45.455 0.00 0.00 0.00 3.09
549 550 4.022068 TCAAGCCAAAATCAGCAACCTTAG 60.022 41.667 0.00 0.00 0.00 2.18
550 551 3.894427 TCAAGCCAAAATCAGCAACCTTA 59.106 39.130 0.00 0.00 0.00 2.69
551 552 2.699846 TCAAGCCAAAATCAGCAACCTT 59.300 40.909 0.00 0.00 0.00 3.50
552 553 2.318908 TCAAGCCAAAATCAGCAACCT 58.681 42.857 0.00 0.00 0.00 3.50
553 554 2.818130 TCAAGCCAAAATCAGCAACC 57.182 45.000 0.00 0.00 0.00 3.77
554 555 3.916761 TCATCAAGCCAAAATCAGCAAC 58.083 40.909 0.00 0.00 0.00 4.17
555 556 4.561938 CCTTCATCAAGCCAAAATCAGCAA 60.562 41.667 0.00 0.00 0.00 3.91
556 557 3.056393 CCTTCATCAAGCCAAAATCAGCA 60.056 43.478 0.00 0.00 0.00 4.41
557 558 3.518590 CCTTCATCAAGCCAAAATCAGC 58.481 45.455 0.00 0.00 0.00 4.26
558 559 3.194968 AGCCTTCATCAAGCCAAAATCAG 59.805 43.478 0.00 0.00 0.00 2.90
559 560 3.167485 AGCCTTCATCAAGCCAAAATCA 58.833 40.909 0.00 0.00 0.00 2.57
560 561 3.881937 AGCCTTCATCAAGCCAAAATC 57.118 42.857 0.00 0.00 0.00 2.17
561 562 4.040706 TGAAAGCCTTCATCAAGCCAAAAT 59.959 37.500 0.00 0.00 36.62 1.82
562 563 3.387374 TGAAAGCCTTCATCAAGCCAAAA 59.613 39.130 0.00 0.00 36.62 2.44
563 564 2.964464 TGAAAGCCTTCATCAAGCCAAA 59.036 40.909 0.00 0.00 36.62 3.28
564 565 2.596346 TGAAAGCCTTCATCAAGCCAA 58.404 42.857 0.00 0.00 36.62 4.52
565 566 2.291209 TGAAAGCCTTCATCAAGCCA 57.709 45.000 0.00 0.00 36.62 4.75
566 567 3.194116 TGATTGAAAGCCTTCATCAAGCC 59.806 43.478 0.00 0.00 41.22 4.35
567 568 4.421948 CTGATTGAAAGCCTTCATCAAGC 58.578 43.478 0.00 1.19 41.22 4.01
568 569 4.703575 TCCTGATTGAAAGCCTTCATCAAG 59.296 41.667 0.00 0.46 41.22 3.02
569 570 4.460382 GTCCTGATTGAAAGCCTTCATCAA 59.540 41.667 0.00 0.00 41.22 2.57
570 571 4.012374 GTCCTGATTGAAAGCCTTCATCA 58.988 43.478 0.00 4.69 41.22 3.07
571 572 3.064545 CGTCCTGATTGAAAGCCTTCATC 59.935 47.826 0.00 0.42 41.22 2.92
572 573 3.012518 CGTCCTGATTGAAAGCCTTCAT 58.987 45.455 0.00 0.00 41.22 2.57
573 574 2.426522 CGTCCTGATTGAAAGCCTTCA 58.573 47.619 0.00 0.00 39.87 3.02
574 575 1.740025 CCGTCCTGATTGAAAGCCTTC 59.260 52.381 0.00 0.00 0.00 3.46
575 576 1.073923 ACCGTCCTGATTGAAAGCCTT 59.926 47.619 0.00 0.00 0.00 4.35
576 577 0.693049 ACCGTCCTGATTGAAAGCCT 59.307 50.000 0.00 0.00 0.00 4.58
577 578 0.804989 CACCGTCCTGATTGAAAGCC 59.195 55.000 0.00 0.00 0.00 4.35
578 579 1.808411 TCACCGTCCTGATTGAAAGC 58.192 50.000 0.00 0.00 0.00 3.51
579 580 3.871594 GGTATCACCGTCCTGATTGAAAG 59.128 47.826 0.00 0.00 32.86 2.62
580 581 3.370103 GGGTATCACCGTCCTGATTGAAA 60.370 47.826 0.00 0.00 39.83 2.69
581 582 2.169769 GGGTATCACCGTCCTGATTGAA 59.830 50.000 0.00 0.00 39.83 2.69
582 583 1.760613 GGGTATCACCGTCCTGATTGA 59.239 52.381 0.00 0.00 39.83 2.57
583 584 1.484653 TGGGTATCACCGTCCTGATTG 59.515 52.381 0.00 0.00 39.83 2.67
584 585 1.874129 TGGGTATCACCGTCCTGATT 58.126 50.000 0.00 0.00 39.83 2.57
585 586 1.694150 CATGGGTATCACCGTCCTGAT 59.306 52.381 0.00 0.00 39.83 2.90
586 587 1.119684 CATGGGTATCACCGTCCTGA 58.880 55.000 0.00 0.00 39.83 3.86
587 588 0.830648 ACATGGGTATCACCGTCCTG 59.169 55.000 0.00 0.00 39.83 3.86
588 589 2.464796 TACATGGGTATCACCGTCCT 57.535 50.000 0.00 0.00 39.83 3.85
605 606 4.963878 CACCCTGGCTGTGGATAC 57.036 61.111 6.03 0.00 0.00 2.24
610 611 2.598394 CCAACCACCCTGGCTGTG 60.598 66.667 0.00 0.00 42.67 3.66
615 616 2.912025 GTGTGCCAACCACCCTGG 60.912 66.667 0.00 0.00 44.01 4.45
616 617 2.912025 GGTGTGCCAACCACCCTG 60.912 66.667 0.00 0.00 45.43 4.45
620 621 2.912025 CCCTGGTGTGCCAACCAC 60.912 66.667 3.54 0.00 45.43 4.16
622 623 2.282462 CTCCCTGGTGTGCCAACC 60.282 66.667 0.00 0.00 45.51 3.77
623 624 0.109723 TAACTCCCTGGTGTGCCAAC 59.890 55.000 0.00 0.00 45.51 3.77
624 625 1.072266 ATAACTCCCTGGTGTGCCAA 58.928 50.000 0.00 0.00 45.51 4.52
625 626 1.072266 AATAACTCCCTGGTGTGCCA 58.928 50.000 0.00 0.00 43.73 4.92
626 627 2.215942 AAATAACTCCCTGGTGTGCC 57.784 50.000 0.00 0.00 0.00 5.01
627 628 3.014623 GGTAAATAACTCCCTGGTGTGC 58.985 50.000 0.00 0.00 0.00 4.57
628 629 3.009695 TGGGTAAATAACTCCCTGGTGTG 59.990 47.826 0.00 0.00 41.58 3.82
629 630 3.261962 TGGGTAAATAACTCCCTGGTGT 58.738 45.455 0.00 0.00 41.58 4.16
630 631 4.310022 TTGGGTAAATAACTCCCTGGTG 57.690 45.455 0.00 0.00 41.58 4.17
631 632 5.081728 GTTTTGGGTAAATAACTCCCTGGT 58.918 41.667 0.00 0.00 41.58 4.00
632 633 4.464951 GGTTTTGGGTAAATAACTCCCTGG 59.535 45.833 0.00 0.00 41.58 4.45
633 634 5.047590 GTGGTTTTGGGTAAATAACTCCCTG 60.048 44.000 0.00 0.00 41.58 4.45
660 661 1.883678 GGTTACCCTAGCCCCAAGTA 58.116 55.000 0.00 0.00 0.00 2.24
725 726 1.450531 CCGCGGTACCGATTAGTCCT 61.451 60.000 37.62 0.00 42.83 3.85
768 769 0.872388 GTCGGTTTCGCTGTTTCCAT 59.128 50.000 0.00 0.00 36.13 3.41
769 770 0.462225 TGTCGGTTTCGCTGTTTCCA 60.462 50.000 0.00 0.00 36.13 3.53
1209 1222 1.312371 ACAGCGAGAGGAGAGCTCAC 61.312 60.000 17.77 9.95 39.48 3.51
1372 1386 7.944729 ATAAGCAGAGCAAAATTTCCTTCTA 57.055 32.000 0.00 0.00 0.00 2.10
1884 2155 1.094785 CCCCACAATTCAGTTAGGCG 58.905 55.000 0.00 0.00 0.00 5.52
2844 3467 4.137116 TGAACCTATGTGTGCCACTATC 57.863 45.455 0.00 0.00 35.11 2.08
2881 3504 7.517614 TCTATGCCAACACTAAATTTGAACA 57.482 32.000 0.00 0.00 0.00 3.18
2980 3603 1.694696 GAGGGGTACTTCTATGCCAGG 59.305 57.143 0.00 0.00 0.00 4.45
3034 3657 4.907875 ACTAGCCAGCCAATAGGAAATAGA 59.092 41.667 0.00 0.00 36.89 1.98
3044 3667 1.005215 AGCTTCAACTAGCCAGCCAAT 59.995 47.619 0.00 0.00 42.20 3.16
3210 3854 2.726821 CTGCTTCAAGGGGCAAATCTA 58.273 47.619 0.00 0.00 38.02 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.